%global __brp_check_rpaths %{nil}
%global __requires_exclude ^libmpi
%global packname PAMscapes
%global packver 0.6.0
%global rlibdir /usr/local/lib/R/library
Name: R-CRAN-%{packname}
Version: 0.6.0
Release: 1%{?dist}%{?buildtag}
Summary: Tools for Summarising and Analysing Soundscape Data
License: GNU General Public License
URL: https://cran.r-project.org/package=%{packname}
Source0: %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz
BuildRequires: R-devel >= 3.5.0
Requires: R-core >= 3.5.0
BuildArch: noarch
BuildRequires: R-CRAN-dplyr
BuildRequires: R-CRAN-rlang
BuildRequires: R-CRAN-ggplot2
BuildRequires: R-CRAN-lubridate
BuildRequires: R-CRAN-scales
BuildRequires: R-CRAN-magrittr
BuildRequires: R-CRAN-tidyr
BuildRequires: R-CRAN-readr
BuildRequires: R-CRAN-httr
BuildRequires: R-CRAN-data.table
BuildRequires: R-CRAN-geosphere
BuildRequires: R-CRAN-sf
BuildRequires: R-CRAN-PAMmisc
BuildRequires: R-CRAN-ncdf4
BuildRequires: R-CRAN-tdigest
BuildRequires: R-CRAN-purrr
Requires: R-CRAN-dplyr
Requires: R-CRAN-rlang
Requires: R-CRAN-ggplot2
Requires: R-CRAN-lubridate
Requires: R-CRAN-scales
Requires: R-CRAN-magrittr
Requires: R-CRAN-tidyr
Requires: R-CRAN-readr
Requires: R-CRAN-httr
Requires: R-CRAN-data.table
Requires: R-CRAN-geosphere
Requires: R-CRAN-sf
Requires: R-CRAN-PAMmisc
Requires: R-CRAN-ncdf4
Requires: R-CRAN-tdigest
Requires: R-CRAN-purrr
%description
A variety of tools relevant to the analysis of marine soundscape data.
There are tools for downloading AIS (automatic identification system) data
from Marine Cadastre , connecting AIS
data to GPS coordinates, plotting summaries of various soundscape
measurements, and downloading relevant environmental variables (wind,
swell height) from the National Center for Atmospheric Research data
server . Most tools were developed
to work well with output from 'Triton' software, but can be adapted to
work with any similar measurements.
%prep
%setup -q -c -n %{packname}
# fix end of executable files
find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
# prevent binary stripping
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
[ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \
sed -i 's@-g0@@g' {} \; || true
# don't allow local prefix in executable scripts
find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;
%build
%install
mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
# remove buildroot from installed files
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;
%files
%{rlibdir}/%{packname}