ContrastStatTest {metaGE} | R Documentation |
The function ContrastStatTest compute the statistic of the contrast test.
ContrastStatTest(Incidence, Contrast = NULL, Zmat, MatCorr, IncidenceName)
Incidence |
A matrix of incidence, as obtained from |
Contrast |
A matrix of contrast, if |
Zmat |
A matrix containing the Zscores of all markers (in rows) in each environment (in columns). |
MatCorr |
The inter-environments correlation matrix. Can be computed using |
IncidenceName |
The name of the incidence. |
A dataset of two columns containing the pvalue of the test of contrast and the minimum number of environment per group of all markers.