%global __brp_check_rpaths %{nil}
%global __requires_exclude ^libmpi
%global packname  heteromixgm
%global packver   2.0.2
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          2.0.2
Release:          1%{?dist}%{?buildtag}
Summary:          Copula Graphical Models for Heterogeneous Mixed Data

License:          GPL-3
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel >= 3.10
Requires:         R-core >= 3.10
BuildArch:        noarch
BuildRequires:    R-CRAN-Matrix 
BuildRequires:    R-CRAN-igraph 
BuildRequires:    R-parallel 
BuildRequires:    R-CRAN-tmvtnorm 
BuildRequires:    R-CRAN-glasso 
BuildRequires:    R-CRAN-BDgraph 
BuildRequires:    R-methods 
BuildRequires:    R-stats 
BuildRequires:    R-utils 
BuildRequires:    R-CRAN-MASS 
Requires:         R-CRAN-Matrix 
Requires:         R-CRAN-igraph 
Requires:         R-parallel 
Requires:         R-CRAN-tmvtnorm 
Requires:         R-CRAN-glasso 
Requires:         R-CRAN-BDgraph 
Requires:         R-methods 
Requires:         R-stats 
Requires:         R-utils 
Requires:         R-CRAN-MASS 

%description
A multi-core R package that allows for the statistical modeling of
multi-group multivariate mixed data using Gaussian graphical models.
Combining the Gaussian copula framework with the fused graphical lasso
penalty, the 'heteromixgm' package can handle a wide variety of datasets
found in various sciences. The package also includes an option to perform
model selection using the AIC, BIC and EBIC information criteria, a
function that plots partial correlation graphs based on the selected
precision matrices, as well as simulate mixed heterogeneous data for
exploratory or simulation purposes and one multi-group multivariate mixed
agricultural dataset pertaining to maize yields. The package implements
the methodological developments found in Hermes et al. (2024)
<doi:10.1080/10618600.2023.2289545>.

%prep
%setup -q -c -n %{packname}

# fix end of executable files
find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
# prevent binary stripping
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
[ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \
  sed -i 's@-g0@@g' {} \; || true
# don't allow local prefix in executable scripts
find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;

%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
# remove buildroot from installed files
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;

%files
%{rlibdir}/%{packname}