gene2ko {ReporterScore} | R Documentation |
You can use 'clusterProfiler::bitr()' to transfer your table from other gene_id to gene_symbol.
gene2ko(genedf, org = "hsa")
genedf |
,rowname is gene symbol (e.g. PFKM), colnames is samples |
org |
kegg organism, listed in 'https://www.genome.jp/kegg/catalog/org_list.html', default, 'hsa' |
kodf
data("genedf")
KOdf <- gene2ko(genedf, org = "hsa")