%global __brp_check_rpaths %{nil}
%global __requires_exclude ^libmpi
%global packname  eq5d
%global packver   0.15.4
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          0.15.4
Release:          1%{?dist}%{?buildtag}
Summary:          Methods for Analysing 'EQ-5D' Data and Calculating 'EQ-5D' Index Scores

License:          MIT + file LICENSE
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel >= 3.5.0
Requires:         R-core >= 3.5.0
BuildArch:        noarch

%description
EQ-5D is a popular health related quality of life instrument used in the
clinical and economic evaluation of health care. Developed by the EuroQol
group <https://euroqol.org/>, the instrument consists of two components:
health state description and evaluation. For the description component a
subject self-rates their health in terms of five dimensions; mobility,
self-care, usual activities, pain/discomfort, and anxiety/depression using
either a three-level (EQ-5D-3L,
<https://euroqol.org/information-and-support/euroqol-instruments/eq-5d-3l/>)
or a five-level (EQ-5D-5L,
<https://euroqol.org/information-and-support/euroqol-instruments/eq-5d-5l/>)
scale. Frequently the scores on these five dimensions are converted to a
single utility index using country specific value sets, which can be used
in the clinical and economic evaluation of health care as well as in
population health surveys. The eq5d package provides methods to calculate
index scores from a subject's dimension scores. 31 TTO and 11 VAS EQ-5D-3L
value sets including those for countries in Szende et al (2007)
<doi:10.1007/1-4020-5511-0> and Szende et al (2014)
<doi:10.1007/978-94-007-7596-1>, 43 EQ-5D-5L EQ-VT value sets, the
EQ-5D-5L crosswalk value sets developed by van Hout et al. (2012)
<doi:10.1016/j.jval.2012.02.008>, the crosswalk value sets for Bermuda and
Russia and the reverse crosswalk value sets. 10 EQ-5D-Y value sets are
also included as are the NICE 'DSU' age-sex based EQ-5D-3L to EQ-5D-5L and
EQ-5D-5L to EQ-5D-3L mappings. Methods are also included for the analysis
of EQ-5D profiles, including those from the book "Methods for Analyzing
and Reporting EQ-5D data" by Devlin et al. (2020)
<doi:10.1007/978-3-030-47622-9>. Additionally a shiny web tool is included
to enable the calculation, visualisation and automated statistical
analysis of EQ-5D data via a web browser using EQ-5D dimension scores
stored in CSV or Excel files.

%prep
%setup -q -c -n %{packname}

# fix end of executable files
find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
# prevent binary stripping
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
[ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \
  sed -i 's@-g0@@g' {} \; || true
# don't allow local prefix in executable scripts
find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;

%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
# remove buildroot from installed files
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;

%files
%{rlibdir}/%{packname}