supercell_UMAP {SuperCell} | R Documentation |
Computes UMAP of super-cells
supercell_UMAP(SC, PCA_name = "SC_PCA", n.comp = NULL, n_neighbors = 15, ...)
SC |
super-cell structure (output of SCimplify) with a field |
PCA_name |
name of |
n.comp |
number of vector of principal components to use for computing UMAP |
n_neighbors |
number of neighbors (parameter of umap) |
... |
other parameters of umap |
umap result