getWiki {geneset} | R Documentation |
Get WikiPathway geneset and geneset_name Geneset is a data.frame of 2 columns with term id and gene id; Geneset_name is a data.frame of 2 columns with term id and term description
getWiki(org = "human", download.method = NULL, data_dir = NULL)
org |
Organism name from 'wiki_org'. |
download.method |
"auto" (as default if NULL), "wininet" (for windows) |
data_dir |
data saving location, default is the package data directory |
A list including geneset and geneset name.
x = getWiki(org = "human", data_dir = tempdir())