%global __brp_check_rpaths %{nil}
%global __requires_exclude ^libmpi
%global packname  RESIDE
%global packver   0.3.2
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          0.3.2
Release:          1%{?dist}%{?buildtag}
Summary:          Rapid Easy Synthesis to Inform Data Extraction

License:          GPL (>= 3)
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel >= 2.10
Requires:         R-core >= 2.10
BuildArch:        noarch
BuildRequires:    R-CRAN-dplyr 
BuildRequires:    R-CRAN-magrittr 
BuildRequires:    R-CRAN-bestNormalize 
BuildRequires:    R-CRAN-RDP 
BuildRequires:    R-methods 
BuildRequires:    R-CRAN-tibble 
BuildRequires:    R-CRAN-simstudy 
BuildRequires:    R-CRAN-matrixcalc 
Requires:         R-CRAN-dplyr 
Requires:         R-CRAN-magrittr 
Requires:         R-CRAN-bestNormalize 
Requires:         R-CRAN-RDP 
Requires:         R-methods 
Requires:         R-CRAN-tibble 
Requires:         R-CRAN-simstudy 
Requires:         R-CRAN-matrixcalc 

%description
Developed to assist researchers with planning analysis, prior to obtaining
data from Trusted Research Environments (TREs) also known as safe havens.
With functionality to export and import marginal distributions as well as
synthesise data, both with and without correlations from these marginal
distributions. Using a multivariate cumulative distribution (COPULA).
Additionally the International Stroke Trial (IST) is included as an
example dataset under ODC-By licence Sandercock et al. (2011)
<doi:10.7488/ds/104>, Sandercock et al. (2011)
<doi:10.1186/1745-6215-12-101>.

%prep
%setup -q -c -n %{packname}

# fix end of executable files
find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
# prevent binary stripping
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
[ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \
  sed -i 's@-g0@@g' {} \; || true
# don't allow local prefix in executable scripts
find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;

%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
# remove buildroot from installed files
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;

%files
%{rlibdir}/%{packname}