Warning: Permanently added '3.95.209.186' (ED25519) to the list of known hosts. Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-ti29__hy/R-CRAN-AllelicSeries/R-CRAN-AllelicSeries.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-ti29__hy/R-CRAN-AllelicSeries --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1732326291.072145 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 5.9 starting (python version = 3.13.0, NVR = mock-5.9-1.fc41), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-ti29__hy/R-CRAN-AllelicSeries/R-CRAN-AllelicSeries.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-ti29__hy/R-CRAN-AllelicSeries --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1732326291.072145 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-ti29__hy/R-CRAN-AllelicSeries/R-CRAN-AllelicSeries.spec) Config(fedora-39-x86_64) Start: clean chroot Finish: clean chroot Mock Version: 5.9 INFO: Mock Version: 5.9 Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-39-x86_64-1732326291.072145/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf4 detected and used (fallback) INFO: Buildroot is handled by package management from host and used with --installroot: rpm-4.20.0-1.fc41.x86_64 rpm-sequoia-1.7.0-2.fc41.x86_64 python3-dnf-4.22.0-1.fc41.noarch python3-dnf-plugins-core-4.10.0-1.fc41.noarch dnf5-5.2.7.0-1.fc41.x86_64 dnf5-plugins-5.2.7.0-1.fc41.x86_64 Start: installing minimal buildroot with dnf No matches found for the following disable plugin patterns: local, spacewalk, versionlock Updating Subscription Management repositories. Unable to read consumer identity This system is not registered with an entitlement server. You can use subscription-manager to register. Copr repository 143 MB/s | 12 MB 00:00 fedora 62 MB/s | 34 MB 00:00 updates 25 MB/s | 12 MB 00:00 Last metadata expiration check: 0:00:01 ago on Sat Nov 23 01:44:56 2024. Dependencies resolved. ================================================================================ Package Arch Version Repo Size ================================================================================ Installing group/module packages: bash x86_64 5.2.26-1.fc39 updates 1.8 M bzip2 x86_64 1.0.8-16.fc39 fedora 52 k coreutils x86_64 9.3-7.fc39 updates 1.1 M cpio x86_64 2.14-4.fc39 fedora 279 k diffutils x86_64 3.10-3.fc39 fedora 398 k fedora-release-common noarch 39-36 updates 19 k findutils x86_64 1:4.9.0-6.fc39 updates 490 k gawk x86_64 5.2.2-2.fc39 fedora 1.1 M glibc-minimal-langpack x86_64 2.38-19.fc39 updates 65 k grep x86_64 3.11-3.fc39 fedora 298 k gzip x86_64 1.12-6.fc39 fedora 166 k info x86_64 7.0.3-3.fc39 fedora 182 k patch x86_64 2.7.6-22.fc39 fedora 125 k redhat-rpm-config noarch 266-1.fc39 updates 78 k rpm-build x86_64 4.19.1.1-1.fc39 updates 78 k sed x86_64 4.8-14.fc39 fedora 306 k shadow-utils x86_64 2:4.14.0-2.fc39 updates 1.3 M tar x86_64 2:1.35-2.fc39 fedora 864 k unzip x86_64 6.0-62.fc39 fedora 184 k util-linux x86_64 2.39.4-1.fc39 updates 1.2 M which x86_64 2.21-40.fc39 fedora 42 k xz x86_64 5.4.4-1.fc39 fedora 556 k Installing dependencies: alternatives x86_64 1.26-1.fc39 updates 39 k ansible-srpm-macros noarch 1-12.fc39 updates 21 k audit-libs x86_64 3.1.5-1.fc39 updates 123 k authselect x86_64 1.4.3-1.fc39 fedora 149 k authselect-libs x86_64 1.4.3-1.fc39 fedora 249 k basesystem noarch 11-18.fc39 fedora 7.2 k binutils x86_64 2.40-14.fc39 updates 5.6 M binutils-gold x86_64 2.40-14.fc39 updates 795 k bzip2-libs x86_64 1.0.8-16.fc39 fedora 41 k ca-certificates noarch 2024.2.69_v8.0.401-1.0.fc39 updates 871 k coreutils-common x86_64 9.3-7.fc39 updates 2.1 M cracklib x86_64 2.9.11-2.fc39 fedora 94 k crypto-policies noarch 20231204-1.git1e3a2e4.fc39 updates 100 k curl x86_64 8.2.1-5.fc39 updates 344 k cyrus-sasl-lib x86_64 2.1.28-11.fc39 fedora 793 k debugedit x86_64 5.0-12.fc39 updates 79 k dwz x86_64 0.15-3.fc39 fedora 134 k ed x86_64 1.19-4.fc39 fedora 79 k efi-srpm-macros noarch 5-9.fc39 fedora 22 k elfutils x86_64 0.192-4.fc39 updates 574 k elfutils-debuginfod-client x86_64 0.192-4.fc39 updates 43 k elfutils-default-yama-scope noarch 0.192-4.fc39 updates 12 k elfutils-libelf x86_64 0.192-4.fc39 updates 208 k elfutils-libs x86_64 0.192-4.fc39 updates 267 k fedora-gpg-keys noarch 39-2 updates 130 k fedora-release noarch 39-36 updates 8.6 k fedora-release-identity-basic noarch 39-36 updates 9.4 k fedora-repos noarch 39-2 updates 9.3 k file x86_64 5.44-5.fc39 fedora 49 k file-libs x86_64 5.44-5.fc39 fedora 729 k filesystem x86_64 3.18-6.fc39 fedora 1.1 M fonts-srpm-macros noarch 1:2.0.5-12.fc39 fedora 26 k forge-srpm-macros noarch 0.3.1-1.fc39 updates 19 k fpc-srpm-macros noarch 1.3-8.fc39 fedora 7.4 k gdb-minimal x86_64 15.1-1.fc39 updates 4.3 M gdbm-libs x86_64 1:1.23-4.fc39 fedora 56 k ghc-srpm-macros noarch 1.6.1-2.fc39 fedora 7.8 k glibc x86_64 2.38-19.fc39 updates 2.1 M glibc-common x86_64 2.38-19.fc39 updates 344 k glibc-gconv-extra x86_64 2.38-19.fc39 updates 1.6 M gmp x86_64 1:6.2.1-5.fc39 fedora 313 k gnat-srpm-macros noarch 6-3.fc39 fedora 8.8 k go-srpm-macros noarch 3.5.0-1.fc39 updates 28 k jansson x86_64 2.13.1-7.fc39 fedora 44 k json-c x86_64 0.17-1.fc39 fedora 43 k kernel-srpm-macros noarch 1.0-20.fc39 fedora 10 k keyutils-libs x86_64 1.6.3-1.fc39 updates 31 k krb5-libs x86_64 1.21.3-2.fc39 updates 766 k libacl x86_64 2.3.1-9.fc39 updates 23 k libarchive x86_64 3.7.1-3.fc39 updates 407 k libattr x86_64 2.5.1-8.fc39 fedora 18 k libblkid x86_64 2.39.4-1.fc39 updates 116 k libbrotli x86_64 1.1.0-1.fc39 fedora 336 k libcap x86_64 2.48-9.fc39 updates 68 k libcap-ng x86_64 0.8.3-8.fc39 fedora 32 k libcom_err x86_64 1.47.0-2.fc39 fedora 26 k libcurl x86_64 8.2.1-5.fc39 updates 322 k libdb x86_64 5.3.28-56.fc39 fedora 760 k libeconf x86_64 0.5.2-2.fc39 updates 30 k libevent x86_64 2.1.12-9.fc39 fedora 258 k libfdisk x86_64 2.39.4-1.fc39 updates 161 k libffi x86_64 3.4.4-4.fc39 fedora 40 k libgcc x86_64 13.3.1-3.fc39 updates 120 k libgomp x86_64 13.3.1-3.fc39 updates 329 k libidn2 x86_64 2.3.7-1.fc39 updates 119 k libmount x86_64 2.39.4-1.fc39 updates 154 k libnghttp2 x86_64 1.55.1-5.fc39 updates 75 k libnsl2 x86_64 2.0.0-6.fc39 fedora 30 k libpkgconf x86_64 1.9.5-2.fc39 fedora 38 k libpsl x86_64 0.21.2-4.fc39 fedora 63 k libpwquality x86_64 1.4.5-6.fc39 fedora 120 k libselinux x86_64 3.5-5.fc39 fedora 87 k libsemanage x86_64 3.5-4.fc39 fedora 120 k libsepol x86_64 3.5-2.fc39 fedora 324 k libsigsegv x86_64 2.14-5.fc39 fedora 27 k libsmartcols x86_64 2.39.4-1.fc39 updates 67 k libssh x86_64 0.10.6-2.fc39 updates 212 k libssh-config noarch 0.10.6-2.fc39 updates 9.0 k libstdc++ x86_64 13.3.1-3.fc39 updates 870 k libtasn1 x86_64 4.19.0-3.fc39 fedora 74 k libtirpc x86_64 1.3.6-0.fc39 updates 94 k libtool-ltdl x86_64 2.4.7-7.fc39 fedora 36 k libunistring x86_64 1.1-5.fc39 fedora 543 k libutempter x86_64 1.2.1-10.fc39 fedora 26 k libuuid x86_64 2.39.4-1.fc39 updates 28 k libverto x86_64 0.3.2-6.fc39 fedora 20 k libxcrypt x86_64 4.4.36-2.fc39 fedora 119 k libxml2 x86_64 2.10.4-3.fc39 fedora 701 k libzstd x86_64 1.5.6-1.fc39 updates 312 k lua-libs x86_64 5.4.6-3.fc39 fedora 133 k lua-srpm-macros noarch 1-13.fc39 updates 8.7 k lz4-libs x86_64 1.9.4-4.fc39 fedora 67 k mpfr x86_64 4.2.0-3.fc39 fedora 344 k ncurses-base noarch 6.4-7.20230520.fc39.1 updates 88 k ncurses-libs x86_64 6.4-7.20230520.fc39.1 updates 336 k ocaml-srpm-macros noarch 8-2.fc39 fedora 14 k openblas-srpm-macros noarch 2-14.fc39 fedora 7.5 k openldap x86_64 2.6.7-1.fc39 updates 254 k openssl-libs x86_64 1:3.1.4-4.fc39 updates 2.2 M p11-kit x86_64 0.25.5-1.fc39 updates 515 k p11-kit-trust x86_64 0.25.5-1.fc39 updates 138 k package-notes-srpm-macros noarch 0.5-9.fc39 fedora 11 k pam x86_64 1.5.3-3.fc39 updates 542 k pam-libs x86_64 1.5.3-3.fc39 updates 56 k pcre2 x86_64 10.42-1.fc39.2 fedora 233 k pcre2-syntax noarch 10.42-1.fc39.2 fedora 143 k perl-srpm-macros noarch 1-51.fc39 fedora 8.0 k pkgconf x86_64 1.9.5-2.fc39 fedora 42 k pkgconf-m4 noarch 1.9.5-2.fc39 fedora 14 k pkgconf-pkg-config x86_64 1.9.5-2.fc39 fedora 9.6 k popt x86_64 1.19-3.fc39 fedora 66 k publicsuffix-list-dafsa noarch 20240107-1.fc39 updates 58 k pyproject-srpm-macros noarch 1.16.0-1.fc39 updates 14 k python-srpm-macros noarch 3.12-8.fc39 updates 23 k qt5-srpm-macros noarch 5.15.14-2.fc39 updates 8.9 k qt6-srpm-macros noarch 6.6.2-1.fc39 updates 8.9 k readline x86_64 8.2-6.fc39 updates 212 k rpm x86_64 4.19.1.1-1.fc39 updates 538 k rpm-build-libs x86_64 4.19.1.1-1.fc39 updates 95 k rpm-libs x86_64 4.19.1.1-1.fc39 updates 312 k rpm-sequoia x86_64 1.7.0-1.fc39 updates 904 k rpmautospec-rpm-macros noarch 0.7.3-1.fc39 updates 11 k rust-srpm-macros noarch 26.3-1.fc39 updates 13 k setup noarch 2.14.4-1.fc39 fedora 154 k sqlite-libs x86_64 3.42.0-7.fc39 fedora 678 k systemd-libs x86_64 254.19-1.fc39 updates 681 k util-linux-core x86_64 2.39.4-1.fc39 updates 507 k xxhash-libs x86_64 0.8.2-4.fc39 updates 37 k xz-libs x86_64 5.4.4-1.fc39 fedora 108 k zip x86_64 3.0-39.fc39 fedora 266 k zlib x86_64 1.2.13-4.fc39 fedora 94 k zstd x86_64 1.5.6-1.fc39 updates 479 k Installing Groups: Buildsystem building group Transaction Summary ================================================================================ Install 154 Packages Total download size: 52 M Installed size: 180 M Downloading Packages: (1/154): basesystem-11-18.fc39.noarch.rpm 689 kB/s | 7.2 kB 00:00 (2/154): authselect-libs-1.4.3-1.fc39.x86_64.rp 21 MB/s | 249 kB 00:00 (3/154): authselect-1.4.3-1.fc39.x86_64.rpm 11 MB/s | 149 kB 00:00 (4/154): bzip2-1.0.8-16.fc39.x86_64.rpm 16 MB/s | 52 kB 00:00 (5/154): bzip2-libs-1.0.8-16.fc39.x86_64.rpm 18 MB/s | 41 kB 00:00 (6/154): cracklib-2.9.11-2.fc39.x86_64.rpm 42 MB/s | 94 kB 00:00 (7/154): cpio-2.14-4.fc39.x86_64.rpm 72 MB/s | 279 kB 00:00 (8/154): cyrus-sasl-lib-2.1.28-11.fc39.x86_64.r 134 MB/s | 793 kB 00:00 (9/154): diffutils-3.10-3.fc39.x86_64.rpm 80 MB/s | 398 kB 00:00 (10/154): dwz-0.15-3.fc39.x86_64.rpm 29 MB/s | 134 kB 00:00 (11/154): ed-1.19-4.fc39.x86_64.rpm 33 MB/s | 79 kB 00:00 (12/154): efi-srpm-macros-5-9.fc39.noarch.rpm 11 MB/s | 22 kB 00:00 (13/154): file-5.44-5.fc39.x86_64.rpm 33 MB/s | 49 kB 00:00 (14/154): fonts-srpm-macros-2.0.5-12.fc39.noarc 18 MB/s | 26 kB 00:00 (15/154): file-libs-5.44-5.fc39.x86_64.rpm 152 MB/s | 729 kB 00:00 (16/154): fpc-srpm-macros-1.3-8.fc39.noarch.rpm 2.1 MB/s | 7.4 kB 00:00 (17/154): filesystem-3.18-6.fc39.x86_64.rpm 150 MB/s | 1.1 MB 00:00 (18/154): gdbm-libs-1.23-4.fc39.x86_64.rpm 27 MB/s | 56 kB 00:00 (19/154): ghc-srpm-macros-1.6.1-2.fc39.noarch.r 3.6 MB/s | 7.8 kB 00:00 (20/154): gnat-srpm-macros-6-3.fc39.noarch.rpm 5.2 MB/s | 8.8 kB 00:00 (21/154): gawk-5.2.2-2.fc39.x86_64.rpm 118 MB/s | 1.1 MB 00:00 (22/154): gmp-6.2.1-5.fc39.x86_64.rpm 51 MB/s | 313 kB 00:00 (23/154): gzip-1.12-6.fc39.x86_64.rpm 82 MB/s | 166 kB 00:00 (24/154): grep-3.11-3.fc39.x86_64.rpm 63 MB/s | 298 kB 00:00 (25/154): info-7.0.3-3.fc39.x86_64.rpm 49 MB/s | 182 kB 00:00 (26/154): jansson-2.13.1-7.fc39.x86_64.rpm 17 MB/s | 44 kB 00:00 (27/154): json-c-0.17-1.fc39.x86_64.rpm 18 MB/s | 43 kB 00:00 (28/154): kernel-srpm-macros-1.0-20.fc39.noarch 5.8 MB/s | 10 kB 00:00 (29/154): libattr-2.5.1-8.fc39.x86_64.rpm 8.3 MB/s | 18 kB 00:00 (30/154): libcap-ng-0.8.3-8.fc39.x86_64.rpm 20 MB/s | 32 kB 00:00 (31/154): libbrotli-1.1.0-1.fc39.x86_64.rpm 95 MB/s | 336 kB 00:00 (32/154): libcom_err-1.47.0-2.fc39.x86_64.rpm 7.2 MB/s | 26 kB 00:00 (33/154): libevent-2.1.12-9.fc39.x86_64.rpm 72 MB/s | 258 kB 00:00 (34/154): libdb-5.3.28-56.fc39.x86_64.rpm 117 MB/s | 760 kB 00:00 (35/154): libffi-3.4.4-4.fc39.x86_64.rpm 9.6 MB/s | 40 kB 00:00 (36/154): libnsl2-2.0.0-6.fc39.x86_64.rpm 12 MB/s | 30 kB 00:00 (37/154): libpkgconf-1.9.5-2.fc39.x86_64.rpm 15 MB/s | 38 kB 00:00 (38/154): libpsl-0.21.2-4.fc39.x86_64.rpm 23 MB/s | 63 kB 00:00 (39/154): libpwquality-1.4.5-6.fc39.x86_64.rpm 42 MB/s | 120 kB 00:00 (40/154): libsemanage-3.5-4.fc39.x86_64.rpm 72 MB/s | 120 kB 00:00 (41/154): libselinux-3.5-5.fc39.x86_64.rpm 33 MB/s | 87 kB 00:00 (42/154): libsepol-3.5-2.fc39.x86_64.rpm 111 MB/s | 324 kB 00:00 (43/154): libsigsegv-2.14-5.fc39.x86_64.rpm 8.2 MB/s | 27 kB 00:00 (44/154): libtool-ltdl-2.4.7-7.fc39.x86_64.rpm 16 MB/s | 36 kB 00:00 (45/154): libtasn1-4.19.0-3.fc39.x86_64.rpm 19 MB/s | 74 kB 00:00 (46/154): libverto-0.3.2-6.fc39.x86_64.rpm 9.2 MB/s | 20 kB 00:00 (47/154): libunistring-1.1-5.fc39.x86_64.rpm 137 MB/s | 543 kB 00:00 (48/154): libutempter-1.2.1-10.fc39.x86_64.rpm 6.1 MB/s | 26 kB 00:00 (49/154): libxcrypt-4.4.36-2.fc39.x86_64.rpm 46 MB/s | 119 kB 00:00 (50/154): lua-libs-5.4.6-3.fc39.x86_64.rpm 67 MB/s | 133 kB 00:00 (51/154): libxml2-2.10.4-3.fc39.x86_64.rpm 135 MB/s | 701 kB 00:00 (52/154): lz4-libs-1.9.4-4.fc39.x86_64.rpm 17 MB/s | 67 kB 00:00 (53/154): mpfr-4.2.0-3.fc39.x86_64.rpm 96 MB/s | 344 kB 00:00 (54/154): ocaml-srpm-macros-8-2.fc39.noarch.rpm 9.3 MB/s | 14 kB 00:00 (55/154): openblas-srpm-macros-2-14.fc39.noarch 4.2 MB/s | 7.5 kB 00:00 (56/154): package-notes-srpm-macros-0.5-9.fc39. 4.5 MB/s | 11 kB 00:00 (57/154): patch-2.7.6-22.fc39.x86_64.rpm 45 MB/s | 125 kB 00:00 (58/154): pcre2-10.42-1.fc39.2.x86_64.rpm 79 MB/s | 233 kB 00:00 (59/154): perl-srpm-macros-1-51.fc39.noarch.rpm 4.3 MB/s | 8.0 kB 00:00 (60/154): pcre2-syntax-10.42-1.fc39.2.noarch.rp 47 MB/s | 143 kB 00:00 (61/154): pkgconf-1.9.5-2.fc39.x86_64.rpm 20 MB/s | 42 kB 00:00 (62/154): pkgconf-m4-1.9.5-2.fc39.noarch.rpm 9.5 MB/s | 14 kB 00:00 (63/154): pkgconf-pkg-config-1.9.5-2.fc39.x86_6 5.3 MB/s | 9.6 kB 00:00 (64/154): popt-1.19-3.fc39.x86_64.rpm 34 MB/s | 66 kB 00:00 (65/154): sed-4.8-14.fc39.x86_64.rpm 93 MB/s | 306 kB 00:00 (66/154): setup-2.14.4-1.fc39.noarch.rpm 57 MB/s | 154 kB 00:00 (67/154): unzip-6.0-62.fc39.x86_64.rpm 102 MB/s | 184 kB 00:00 (68/154): sqlite-libs-3.42.0-7.fc39.x86_64.rpm 92 MB/s | 678 kB 00:00 (69/154): tar-1.35-2.fc39.x86_64.rpm 123 MB/s | 864 kB 00:00 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Userid : "Fedora (39) " Fingerprint: E8F2 3996 F232 1864 0CB4 4CBE 75CF 5AC4 18B8 E74C From : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-39-primary Key imported successfully Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Running scriptlet: filesystem-3.18-6.fc39.x86_64 1/1 Preparing : 1/1 Installing : libgcc-13.3.1-3.fc39.x86_64 1/154 Running scriptlet: libgcc-13.3.1-3.fc39.x86_64 1/154 Installing : crypto-policies-20231204-1.git1e3a2e4.fc39.noarc 2/154 Running scriptlet: crypto-policies-20231204-1.git1e3a2e4.fc39.noarc 2/154 Installing : rust-srpm-macros-26.3-1.fc39.noarch 3/154 Installing : qt6-srpm-macros-6.6.2-1.fc39.noarch 4/154 Installing : qt5-srpm-macros-5.15.14-2.fc39.noarch 5/154 Installing : publicsuffix-list-dafsa-20240107-1.fc39.noarch 6/154 Installing : ncurses-base-6.4-7.20230520.fc39.1.noarch 7/154 Installing : libssh-config-0.10.6-2.fc39.noarch 8/154 Installing : fedora-release-identity-basic-39-36.noarch 9/154 Installing : fedora-gpg-keys-39-2.noarch 10/154 Installing : fedora-repos-39-2.noarch 11/154 Installing : fedora-release-common-39-36.noarch 12/154 Installing : fedora-release-39-36.noarch 13/154 Installing : setup-2.14.4-1.fc39.noarch 14/154 warning: 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libutempter-1.2.1-10.fc39.x86_64 135/154 Installing : libutempter-1.2.1-10.fc39.x86_64 135/154 Installing : patch-2.7.6-22.fc39.x86_64 136/154 Installing : tar-2:1.35-2.fc39.x86_64 137/154 Installing : package-notes-srpm-macros-0.5-9.fc39.noarch 138/154 Installing : openblas-srpm-macros-2-14.fc39.noarch 139/154 Installing : ocaml-srpm-macros-8-2.fc39.noarch 140/154 Installing : kernel-srpm-macros-1.0-20.fc39.noarch 141/154 Installing : gnat-srpm-macros-6-3.fc39.noarch 142/154 Installing : ghc-srpm-macros-1.6.1-2.fc39.noarch 143/154 Installing : fpc-srpm-macros-1.3-8.fc39.noarch 144/154 Installing : fonts-srpm-macros-1:2.0.5-12.fc39.noarch 145/154 Installing : forge-srpm-macros-0.3.1-1.fc39.noarch 146/154 Installing : go-srpm-macros-3.5.0-1.fc39.noarch 147/154 Installing : python-srpm-macros-3.12-8.fc39.noarch 148/154 Installing : redhat-rpm-config-266-1.fc39.noarch 149/154 Installing : rpm-build-4.19.1.1-1.fc39.x86_64 150/154 Installing : pyproject-srpm-macros-1.16.0-1.fc39.noarch 151/154 Installing : util-linux-2.39.4-1.fc39.x86_64 152/154 Running scriptlet: util-linux-2.39.4-1.fc39.x86_64 152/154 Installing : which-2.21-40.fc39.x86_64 153/154 Installing : info-7.0.3-3.fc39.x86_64 154/154 Running scriptlet: filesystem-3.18-6.fc39.x86_64 154/154 Running scriptlet: ca-certificates-2024.2.69_v8.0.401-1.0.fc39.noar 154/154 Running scriptlet: authselect-libs-1.4.3-1.fc39.x86_64 154/154 Running scriptlet: rpm-4.19.1.1-1.fc39.x86_64 154/154 Running scriptlet: info-7.0.3-3.fc39.x86_64 154/154 Installed products updated. Installed: alternatives-1.26-1.fc39.x86_64 ansible-srpm-macros-1-12.fc39.noarch audit-libs-3.1.5-1.fc39.x86_64 authselect-1.4.3-1.fc39.x86_64 authselect-libs-1.4.3-1.fc39.x86_64 basesystem-11-18.fc39.noarch bash-5.2.26-1.fc39.x86_64 binutils-2.40-14.fc39.x86_64 binutils-gold-2.40-14.fc39.x86_64 bzip2-1.0.8-16.fc39.x86_64 bzip2-libs-1.0.8-16.fc39.x86_64 ca-certificates-2024.2.69_v8.0.401-1.0.fc39.noarch coreutils-9.3-7.fc39.x86_64 coreutils-common-9.3-7.fc39.x86_64 cpio-2.14-4.fc39.x86_64 cracklib-2.9.11-2.fc39.x86_64 crypto-policies-20231204-1.git1e3a2e4.fc39.noarch curl-8.2.1-5.fc39.x86_64 cyrus-sasl-lib-2.1.28-11.fc39.x86_64 debugedit-5.0-12.fc39.x86_64 diffutils-3.10-3.fc39.x86_64 dwz-0.15-3.fc39.x86_64 ed-1.19-4.fc39.x86_64 efi-srpm-macros-5-9.fc39.noarch elfutils-0.192-4.fc39.x86_64 elfutils-debuginfod-client-0.192-4.fc39.x86_64 elfutils-default-yama-scope-0.192-4.fc39.noarch elfutils-libelf-0.192-4.fc39.x86_64 elfutils-libs-0.192-4.fc39.x86_64 fedora-gpg-keys-39-2.noarch fedora-release-39-36.noarch fedora-release-common-39-36.noarch fedora-release-identity-basic-39-36.noarch fedora-repos-39-2.noarch file-5.44-5.fc39.x86_64 file-libs-5.44-5.fc39.x86_64 filesystem-3.18-6.fc39.x86_64 findutils-1:4.9.0-6.fc39.x86_64 fonts-srpm-macros-1:2.0.5-12.fc39.noarch forge-srpm-macros-0.3.1-1.fc39.noarch fpc-srpm-macros-1.3-8.fc39.noarch gawk-5.2.2-2.fc39.x86_64 gdb-minimal-15.1-1.fc39.x86_64 gdbm-libs-1:1.23-4.fc39.x86_64 ghc-srpm-macros-1.6.1-2.fc39.noarch glibc-2.38-19.fc39.x86_64 glibc-common-2.38-19.fc39.x86_64 glibc-gconv-extra-2.38-19.fc39.x86_64 glibc-minimal-langpack-2.38-19.fc39.x86_64 gmp-1:6.2.1-5.fc39.x86_64 gnat-srpm-macros-6-3.fc39.noarch go-srpm-macros-3.5.0-1.fc39.noarch grep-3.11-3.fc39.x86_64 gzip-1.12-6.fc39.x86_64 info-7.0.3-3.fc39.x86_64 jansson-2.13.1-7.fc39.x86_64 json-c-0.17-1.fc39.x86_64 kernel-srpm-macros-1.0-20.fc39.noarch keyutils-libs-1.6.3-1.fc39.x86_64 krb5-libs-1.21.3-2.fc39.x86_64 libacl-2.3.1-9.fc39.x86_64 libarchive-3.7.1-3.fc39.x86_64 libattr-2.5.1-8.fc39.x86_64 libblkid-2.39.4-1.fc39.x86_64 libbrotli-1.1.0-1.fc39.x86_64 libcap-2.48-9.fc39.x86_64 libcap-ng-0.8.3-8.fc39.x86_64 libcom_err-1.47.0-2.fc39.x86_64 libcurl-8.2.1-5.fc39.x86_64 libdb-5.3.28-56.fc39.x86_64 libeconf-0.5.2-2.fc39.x86_64 libevent-2.1.12-9.fc39.x86_64 libfdisk-2.39.4-1.fc39.x86_64 libffi-3.4.4-4.fc39.x86_64 libgcc-13.3.1-3.fc39.x86_64 libgomp-13.3.1-3.fc39.x86_64 libidn2-2.3.7-1.fc39.x86_64 libmount-2.39.4-1.fc39.x86_64 libnghttp2-1.55.1-5.fc39.x86_64 libnsl2-2.0.0-6.fc39.x86_64 libpkgconf-1.9.5-2.fc39.x86_64 libpsl-0.21.2-4.fc39.x86_64 libpwquality-1.4.5-6.fc39.x86_64 libselinux-3.5-5.fc39.x86_64 libsemanage-3.5-4.fc39.x86_64 libsepol-3.5-2.fc39.x86_64 libsigsegv-2.14-5.fc39.x86_64 libsmartcols-2.39.4-1.fc39.x86_64 libssh-0.10.6-2.fc39.x86_64 libssh-config-0.10.6-2.fc39.noarch libstdc++-13.3.1-3.fc39.x86_64 libtasn1-4.19.0-3.fc39.x86_64 libtirpc-1.3.6-0.fc39.x86_64 libtool-ltdl-2.4.7-7.fc39.x86_64 libunistring-1.1-5.fc39.x86_64 libutempter-1.2.1-10.fc39.x86_64 libuuid-2.39.4-1.fc39.x86_64 libverto-0.3.2-6.fc39.x86_64 libxcrypt-4.4.36-2.fc39.x86_64 libxml2-2.10.4-3.fc39.x86_64 libzstd-1.5.6-1.fc39.x86_64 lua-libs-5.4.6-3.fc39.x86_64 lua-srpm-macros-1-13.fc39.noarch lz4-libs-1.9.4-4.fc39.x86_64 mpfr-4.2.0-3.fc39.x86_64 ncurses-base-6.4-7.20230520.fc39.1.noarch ncurses-libs-6.4-7.20230520.fc39.1.x86_64 ocaml-srpm-macros-8-2.fc39.noarch openblas-srpm-macros-2-14.fc39.noarch openldap-2.6.7-1.fc39.x86_64 openssl-libs-1:3.1.4-4.fc39.x86_64 p11-kit-0.25.5-1.fc39.x86_64 p11-kit-trust-0.25.5-1.fc39.x86_64 package-notes-srpm-macros-0.5-9.fc39.noarch pam-1.5.3-3.fc39.x86_64 pam-libs-1.5.3-3.fc39.x86_64 patch-2.7.6-22.fc39.x86_64 pcre2-10.42-1.fc39.2.x86_64 pcre2-syntax-10.42-1.fc39.2.noarch perl-srpm-macros-1-51.fc39.noarch pkgconf-1.9.5-2.fc39.x86_64 pkgconf-m4-1.9.5-2.fc39.noarch pkgconf-pkg-config-1.9.5-2.fc39.x86_64 popt-1.19-3.fc39.x86_64 publicsuffix-list-dafsa-20240107-1.fc39.noarch pyproject-srpm-macros-1.16.0-1.fc39.noarch python-srpm-macros-3.12-8.fc39.noarch qt5-srpm-macros-5.15.14-2.fc39.noarch qt6-srpm-macros-6.6.2-1.fc39.noarch readline-8.2-6.fc39.x86_64 redhat-rpm-config-266-1.fc39.noarch rpm-4.19.1.1-1.fc39.x86_64 rpm-build-4.19.1.1-1.fc39.x86_64 rpm-build-libs-4.19.1.1-1.fc39.x86_64 rpm-libs-4.19.1.1-1.fc39.x86_64 rpm-sequoia-1.7.0-1.fc39.x86_64 rpmautospec-rpm-macros-0.7.3-1.fc39.noarch rust-srpm-macros-26.3-1.fc39.noarch sed-4.8-14.fc39.x86_64 setup-2.14.4-1.fc39.noarch shadow-utils-2:4.14.0-2.fc39.x86_64 sqlite-libs-3.42.0-7.fc39.x86_64 systemd-libs-254.19-1.fc39.x86_64 tar-2:1.35-2.fc39.x86_64 unzip-6.0-62.fc39.x86_64 util-linux-2.39.4-1.fc39.x86_64 util-linux-core-2.39.4-1.fc39.x86_64 which-2.21-40.fc39.x86_64 xxhash-libs-0.8.2-4.fc39.x86_64 xz-5.4.4-1.fc39.x86_64 xz-libs-5.4.4-1.fc39.x86_64 zip-3.0-39.fc39.x86_64 zlib-1.2.13-4.fc39.x86_64 zstd-1.5.6-1.fc39.x86_64 Complete! Finish: installing minimal buildroot with dnf Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: alternatives-1.26-1.fc39.x86_64 ansible-srpm-macros-1-12.fc39.noarch audit-libs-3.1.5-1.fc39.x86_64 authselect-1.4.3-1.fc39.x86_64 authselect-libs-1.4.3-1.fc39.x86_64 basesystem-11-18.fc39.noarch bash-5.2.26-1.fc39.x86_64 binutils-2.40-14.fc39.x86_64 binutils-gold-2.40-14.fc39.x86_64 bzip2-1.0.8-16.fc39.x86_64 bzip2-libs-1.0.8-16.fc39.x86_64 ca-certificates-2024.2.69_v8.0.401-1.0.fc39.noarch coreutils-9.3-7.fc39.x86_64 coreutils-common-9.3-7.fc39.x86_64 cpio-2.14-4.fc39.x86_64 cracklib-2.9.11-2.fc39.x86_64 crypto-policies-20231204-1.git1e3a2e4.fc39.noarch curl-8.2.1-5.fc39.x86_64 cyrus-sasl-lib-2.1.28-11.fc39.x86_64 debugedit-5.0-12.fc39.x86_64 diffutils-3.10-3.fc39.x86_64 dwz-0.15-3.fc39.x86_64 ed-1.19-4.fc39.x86_64 efi-srpm-macros-5-9.fc39.noarch elfutils-0.192-4.fc39.x86_64 elfutils-debuginfod-client-0.192-4.fc39.x86_64 elfutils-default-yama-scope-0.192-4.fc39.noarch elfutils-libelf-0.192-4.fc39.x86_64 elfutils-libs-0.192-4.fc39.x86_64 fedora-gpg-keys-39-2.noarch fedora-release-39-36.noarch fedora-release-common-39-36.noarch fedora-release-identity-basic-39-36.noarch fedora-repos-39-2.noarch file-5.44-5.fc39.x86_64 file-libs-5.44-5.fc39.x86_64 filesystem-3.18-6.fc39.x86_64 findutils-4.9.0-6.fc39.x86_64 fonts-srpm-macros-2.0.5-12.fc39.noarch forge-srpm-macros-0.3.1-1.fc39.noarch fpc-srpm-macros-1.3-8.fc39.noarch gawk-5.2.2-2.fc39.x86_64 gdb-minimal-15.1-1.fc39.x86_64 gdbm-libs-1.23-4.fc39.x86_64 ghc-srpm-macros-1.6.1-2.fc39.noarch glibc-2.38-19.fc39.x86_64 glibc-common-2.38-19.fc39.x86_64 glibc-gconv-extra-2.38-19.fc39.x86_64 glibc-minimal-langpack-2.38-19.fc39.x86_64 gmp-6.2.1-5.fc39.x86_64 gnat-srpm-macros-6-3.fc39.noarch go-srpm-macros-3.5.0-1.fc39.noarch gpg-pubkey-18b8e74c-62f2920f grep-3.11-3.fc39.x86_64 gzip-1.12-6.fc39.x86_64 info-7.0.3-3.fc39.x86_64 jansson-2.13.1-7.fc39.x86_64 json-c-0.17-1.fc39.x86_64 kernel-srpm-macros-1.0-20.fc39.noarch keyutils-libs-1.6.3-1.fc39.x86_64 krb5-libs-1.21.3-2.fc39.x86_64 libacl-2.3.1-9.fc39.x86_64 libarchive-3.7.1-3.fc39.x86_64 libattr-2.5.1-8.fc39.x86_64 libblkid-2.39.4-1.fc39.x86_64 libbrotli-1.1.0-1.fc39.x86_64 libcap-2.48-9.fc39.x86_64 libcap-ng-0.8.3-8.fc39.x86_64 libcom_err-1.47.0-2.fc39.x86_64 libcurl-8.2.1-5.fc39.x86_64 libdb-5.3.28-56.fc39.x86_64 libeconf-0.5.2-2.fc39.x86_64 libevent-2.1.12-9.fc39.x86_64 libfdisk-2.39.4-1.fc39.x86_64 libffi-3.4.4-4.fc39.x86_64 libgcc-13.3.1-3.fc39.x86_64 libgomp-13.3.1-3.fc39.x86_64 libidn2-2.3.7-1.fc39.x86_64 libmount-2.39.4-1.fc39.x86_64 libnghttp2-1.55.1-5.fc39.x86_64 libnsl2-2.0.0-6.fc39.x86_64 libpkgconf-1.9.5-2.fc39.x86_64 libpsl-0.21.2-4.fc39.x86_64 libpwquality-1.4.5-6.fc39.x86_64 libselinux-3.5-5.fc39.x86_64 libsemanage-3.5-4.fc39.x86_64 libsepol-3.5-2.fc39.x86_64 libsigsegv-2.14-5.fc39.x86_64 libsmartcols-2.39.4-1.fc39.x86_64 libssh-0.10.6-2.fc39.x86_64 libssh-config-0.10.6-2.fc39.noarch libstdc++-13.3.1-3.fc39.x86_64 libtasn1-4.19.0-3.fc39.x86_64 libtirpc-1.3.6-0.fc39.x86_64 libtool-ltdl-2.4.7-7.fc39.x86_64 libunistring-1.1-5.fc39.x86_64 libutempter-1.2.1-10.fc39.x86_64 libuuid-2.39.4-1.fc39.x86_64 libverto-0.3.2-6.fc39.x86_64 libxcrypt-4.4.36-2.fc39.x86_64 libxml2-2.10.4-3.fc39.x86_64 libzstd-1.5.6-1.fc39.x86_64 lua-libs-5.4.6-3.fc39.x86_64 lua-srpm-macros-1-13.fc39.noarch lz4-libs-1.9.4-4.fc39.x86_64 mpfr-4.2.0-3.fc39.x86_64 ncurses-base-6.4-7.20230520.fc39.1.noarch ncurses-libs-6.4-7.20230520.fc39.1.x86_64 ocaml-srpm-macros-8-2.fc39.noarch openblas-srpm-macros-2-14.fc39.noarch openldap-2.6.7-1.fc39.x86_64 openssl-libs-3.1.4-4.fc39.x86_64 p11-kit-0.25.5-1.fc39.x86_64 p11-kit-trust-0.25.5-1.fc39.x86_64 package-notes-srpm-macros-0.5-9.fc39.noarch pam-1.5.3-3.fc39.x86_64 pam-libs-1.5.3-3.fc39.x86_64 patch-2.7.6-22.fc39.x86_64 pcre2-10.42-1.fc39.2.x86_64 pcre2-syntax-10.42-1.fc39.2.noarch perl-srpm-macros-1-51.fc39.noarch pkgconf-1.9.5-2.fc39.x86_64 pkgconf-m4-1.9.5-2.fc39.noarch pkgconf-pkg-config-1.9.5-2.fc39.x86_64 popt-1.19-3.fc39.x86_64 publicsuffix-list-dafsa-20240107-1.fc39.noarch pyproject-srpm-macros-1.16.0-1.fc39.noarch python-srpm-macros-3.12-8.fc39.noarch qt5-srpm-macros-5.15.14-2.fc39.noarch qt6-srpm-macros-6.6.2-1.fc39.noarch readline-8.2-6.fc39.x86_64 redhat-rpm-config-266-1.fc39.noarch rpm-4.19.1.1-1.fc39.x86_64 rpm-build-4.19.1.1-1.fc39.x86_64 rpm-build-libs-4.19.1.1-1.fc39.x86_64 rpm-libs-4.19.1.1-1.fc39.x86_64 rpm-sequoia-1.7.0-1.fc39.x86_64 rpmautospec-rpm-macros-0.7.3-1.fc39.noarch rust-srpm-macros-26.3-1.fc39.noarch sed-4.8-14.fc39.x86_64 setup-2.14.4-1.fc39.noarch shadow-utils-4.14.0-2.fc39.x86_64 sqlite-libs-3.42.0-7.fc39.x86_64 systemd-libs-254.19-1.fc39.x86_64 tar-1.35-2.fc39.x86_64 unzip-6.0-62.fc39.x86_64 util-linux-2.39.4-1.fc39.x86_64 util-linux-core-2.39.4-1.fc39.x86_64 which-2.21-40.fc39.x86_64 xxhash-libs-0.8.2-4.fc39.x86_64 xz-5.4.4-1.fc39.x86_64 xz-libs-5.4.4-1.fc39.x86_64 zip-3.0-39.fc39.x86_64 zlib-1.2.13-4.fc39.x86_64 zstd-1.5.6-1.fc39.x86_64 Start: buildsrpm Start: rpmbuild -bs warning: source_date_epoch_from_changelog set but %changelog is missing Building target platforms: x86_64 Building for target x86_64 Wrote: /builddir/build/SRPMS/R-CRAN-AllelicSeries-0.1.1.1-1.fc39.copr8305235.src.rpm RPM build warnings: source_date_epoch_from_changelog set but %changelog is missing Finish: rpmbuild -bs INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-39-x86_64-1732326291.072145/root/var/log/dnf.log /var/lib/mock/fedora-39-x86_64-1732326291.072145/root/var/log/dnf.librepo.log /var/lib/mock/fedora-39-x86_64-1732326291.072145/root/var/log/dnf.rpm.log INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz /bin/tar: Removing leading `/' from member names Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-ti29__hy/R-CRAN-AllelicSeries/R-CRAN-AllelicSeries.spec) Config(child) 0 minutes 14 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/R-CRAN-AllelicSeries-0.1.1.1-1.fc39.copr8305235.src.rpm) Config(fedora-39-x86_64) Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-39-x86_64-1732326291.072145/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management from host and used with --installroot: rpm-4.20.0-1.fc41.x86_64 rpm-sequoia-1.7.0-2.fc41.x86_64 python3-dnf-4.22.0-1.fc41.noarch python3-dnf-plugins-core-4.10.0-1.fc41.noarch dnf5-5.2.7.0-1.fc41.x86_64 dnf5-plugins-5.2.7.0-1.fc41.x86_64 Finish: chroot init Start: build phase for R-CRAN-AllelicSeries-0.1.1.1-1.fc39.copr8305235.src.rpm Start: build setup for R-CRAN-AllelicSeries-0.1.1.1-1.fc39.copr8305235.src.rpm warning: source_date_epoch_from_changelog set but %changelog is missing Building target platforms: x86_64 Building for target x86_64 Wrote: /builddir/build/SRPMS/R-CRAN-AllelicSeries-0.1.1.1-1.fc39.copr8305235.src.rpm RPM build warnings: source_date_epoch_from_changelog set but %changelog is missing No matches found for the following disable plugin patterns: local, spacewalk, versionlock Updating Subscription Management repositories. Unable to read consumer identity This system is not registered with an entitlement server. You can use subscription-manager to register. Copr repository 8.4 kB/s | 1.5 kB 00:00 fedora 111 kB/s | 32 kB 00:00 updates 310 kB/s | 30 kB 00:00 Dependencies resolved. ========================================================================================== Package Arch Version Repo Size ========================================================================================== Installing: R-CRAN-CompQuadForm x86_64 1.4.3-3.fc39.copr6279686 copr_base 57 k R-CRAN-RNOmni x86_64 1.0.1.2-1.fc39.copr6395801 copr_base 199 k R-CRAN-Rcpp x86_64 1.0.13.1-1.fc39.copr8204071 copr_base 2.0 M R-CRAN-RcppArmadillo x86_64 14.2.0.1-1.fc39.copr8278649 copr_base 920 k R-CRAN-SKAT x86_64 2.2.5-1.fc39.copr6665476 copr_base 1.3 M R-CRAN-glue x86_64 1.8.0-1.fc39.copr8094211 copr_base 172 k R-core x86_64 4.3.3-2.fc39 updates 64 M R-devel x86_64 4.3.3-2.fc39 updates 10 k Installing dependencies: R-CRAN-Matrix x86_64 1.6.5-1.fc39.copr6886765 copr_base 4.1 M R-CRAN-RSpectra x86_64 0.16.2-1.fc39.copr7752181 copr_base 440 k R-CRAN-SPAtest noarch 3.1.2-1.fc39.copr6280801 copr_base 132 k R-CRAN-lattice x86_64 0.22.6-1.fc39.copr7307082 copr_base 1.4 M R-CRAN-plyr x86_64 1.8.9-1.fc39.copr6484845 copr_base 856 k R-core-devel x86_64 4.3.3-2.fc39 updates 93 k R-java x86_64 4.3.3-2.fc39 updates 11 k R-java-devel x86_64 4.3.3-2.fc39 updates 10 k R-littler x86_64 0.3.19-1.fc39 updates 76 k R-rpm-macros noarch 1.2.1-7.fc39 fedora 11 k abattis-cantarell-vf-fonts noarch 0.301-10.fc39 fedora 121 k alsa-lib x86_64 1.2.12-1.fc39 updates 521 k annobin-docs noarch 12.60-1.fc39 updates 88 k annobin-plugin-gcc x86_64 12.60-1.fc39 updates 965 k avahi-libs x86_64 0.8-24.fc39 fedora 67 k brotli x86_64 1.1.0-1.fc39 fedora 20 k brotli-devel x86_64 1.1.0-1.fc39 fedora 34 k bzip2-devel x86_64 1.0.8-16.fc39 fedora 214 k cairo x86_64 1.18.0-1.fc39 fedora 710 k cmake-filesystem x86_64 3.30.5-1.fc39 updates 17 k copy-jdk-configs noarch 4.1-3.fc39 fedora 28 k cpp x86_64 13.3.1-3.fc39 updates 11 M crypto-policies-scripts noarch 20231204-1.git1e3a2e4.fc39 updates 117 k cups-libs x86_64 1:2.4.11-1.fc39 updates 268 k dbus-libs x86_64 1:1.14.10-1.fc39 fedora 156 k default-fonts-core-sans noarch 4.0-9.fc39 fedora 32 k desktop-file-utils x86_64 0.26-9.fc39 fedora 72 k emacs-filesystem noarch 1:29.4-2.fc39 updates 7.3 k expat x86_64 2.6.3-1.fc39 updates 114 k flexiblas x86_64 3.4.4-1.fc39 updates 25 k flexiblas-devel x86_64 3.4.4-1.fc39 updates 121 k flexiblas-netlib x86_64 3.4.4-1.fc39 updates 3.1 M flexiblas-netlib64 x86_64 3.4.4-1.fc39 updates 3.0 M flexiblas-openblas-openmp x86_64 3.4.4-1.fc39 updates 17 k flexiblas-openblas-openmp64 x86_64 3.4.4-1.fc39 updates 17 k fontconfig x86_64 2.14.2-6.fc39 updates 296 k fontconfig-devel x86_64 2.14.2-6.fc39 updates 164 k fonts-filesystem noarch 1:2.0.5-12.fc39 fedora 8.2 k freetype x86_64 2.13.1-2.fc39 fedora 414 k freetype-devel x86_64 2.13.1-2.fc39 fedora 950 k fribidi x86_64 1.0.13-2.fc39 fedora 91 k gc x86_64 8.2.2-4.fc39 fedora 110 k gcc x86_64 13.3.1-3.fc39 updates 34 M gcc-c++ x86_64 13.3.1-3.fc39 updates 13 M gcc-gfortran x86_64 13.3.1-3.fc39 updates 12 M gcc-plugin-annobin x86_64 13.3.1-3.fc39 updates 58 k gettext x86_64 0.22-2.fc39 fedora 1.1 M gettext-envsubst x86_64 0.22-2.fc39 fedora 36 k gettext-libs x86_64 0.22-2.fc39 fedora 328 k gettext-runtime x86_64 0.22-2.fc39 fedora 120 k glib2 x86_64 2.78.6-1.fc39 updates 2.8 M glib2-devel x86_64 2.78.6-1.fc39 updates 594 k glibc-devel x86_64 2.38-19.fc39 updates 74 k glibc-headers-x86 noarch 2.38-19.fc39 updates 562 k gnutls x86_64 3.8.6-1.fc39 updates 1.1 M google-noto-fonts-common noarch 20240101-1.fc39 updates 17 k google-noto-sans-vf-fonts noarch 20240101-1.fc39 updates 593 k graphite2 x86_64 1.3.14-12.fc39 fedora 95 k graphite2-devel x86_64 1.3.14-12.fc39 fedora 20 k guile22 x86_64 2.2.7-9.fc39 fedora 6.5 M harfbuzz x86_64 8.2.1-2.fc39 fedora 975 k harfbuzz-devel x86_64 8.2.1-2.fc39 fedora 450 k harfbuzz-icu x86_64 8.2.1-2.fc39 fedora 17 k java-17-openjdk x86_64 1:17.0.13.0.11-1.fc39 updates 420 k java-17-openjdk-devel x86_64 1:17.0.13.0.11-1.fc39 updates 4.7 M java-17-openjdk-headless x86_64 1:17.0.13.0.11-1.fc39 updates 44 M javapackages-filesystem noarch 6.1.0-10.fc39 fedora 12 k jbigkit-libs x86_64 2.1-26.fc39 fedora 53 k kernel-headers x86_64 6.11.3-100.fc39 updates 1.6 M libICE x86_64 1.0.10-11.fc39 fedora 70 k libRmath x86_64 4.3.3-2.fc39 updates 121 k libRmath-devel x86_64 4.3.3-2.fc39 updates 16 k libSM x86_64 1.2.3-13.fc39 fedora 41 k libX11 x86_64 1.8.9-1.fc39 updates 650 k libX11-common noarch 1.8.9-1.fc39 updates 176 k libX11-devel x86_64 1.8.9-1.fc39 updates 1.0 M libX11-xcb x86_64 1.8.9-1.fc39 updates 12 k libXau x86_64 1.0.11-3.fc39 fedora 31 k libXau-devel x86_64 1.0.11-3.fc39 fedora 14 k libXcomposite x86_64 0.4.5-10.fc39 fedora 23 k libXext x86_64 1.3.5-3.fc39 fedora 39 k libXft x86_64 2.3.8-3.fc39 fedora 72 k libXft-devel x86_64 2.3.8-3.fc39 fedora 50 k libXi x86_64 1.8.1-2.fc39 fedora 40 k libXmu x86_64 1.1.4-3.fc39 fedora 76 k libXrender x86_64 0.9.11-3.fc39 fedora 27 k libXrender-devel x86_64 0.9.11-3.fc39 fedora 19 k libXt x86_64 1.2.1-5.fc39 fedora 178 k libXtst x86_64 1.2.4-3.fc39 fedora 20 k libb2 x86_64 0.98.1-9.fc39 fedora 25 k libblkid-devel x86_64 2.39.4-1.fc39 updates 18 k libdatrie x86_64 0.2.13-7.fc39 fedora 32 k libffi-devel x86_64 3.4.4-4.fc39 fedora 29 k libfontenc x86_64 1.1.6-3.fc39 fedora 32 k libgfortran x86_64 13.3.1-3.fc39 updates 909 k libicu x86_64 73.2-2.fc39 fedora 11 M libicu-devel x86_64 73.2-2.fc39 fedora 924 k libjpeg-turbo x86_64 2.1.4-3.fc39 fedora 183 k liblerc x86_64 4.0.0-4.fc39 fedora 201 k libmount-devel x86_64 2.39.4-1.fc39 updates 18 k libmpc x86_64 1.3.1-3.fc39 fedora 70 k libpng x86_64 2:1.6.37-15.fc39 fedora 119 k libpng-devel x86_64 2:1.6.37-15.fc39 fedora 291 k libquadmath x86_64 13.3.1-3.fc39 updates 205 k libquadmath-devel x86_64 13.3.1-3.fc39 updates 47 k libselinux-devel x86_64 3.5-5.fc39 fedora 151 k libsepol-devel x86_64 3.5-2.fc39 fedora 49 k libstdc++-devel x86_64 13.3.1-3.fc39 updates 2.6 M libthai x86_64 0.1.29-6.fc39 fedora 213 k libtiff x86_64 4.4.0-10.fc39 updates 200 k libtirpc-devel x86_64 1.3.6-0.fc39 updates 125 k libwebp x86_64 1.3.2-2.fc39 fedora 284 k libxcb x86_64 1.13.1-12.fc39 fedora 233 k libxcb-devel x86_64 1.13.1-12.fc39 fedora 1.4 M libxcrypt-devel x86_64 4.4.36-2.fc39 fedora 30 k libxml2-devel x86_64 2.10.4-3.fc39 fedora 527 k lksctp-tools x86_64 1.0.20-1.fc39 updates 97 k lua x86_64 5.4.6-3.fc39 fedora 191 k lua-posix x86_64 36.2.1-3.fc39 fedora 143 k make x86_64 1:4.4.1-2.fc39 fedora 589 k mkfontscale x86_64 1.2.2-4.fc39 fedora 32 k mpdecimal x86_64 2.5.1-7.fc39 fedora 89 k nettle x86_64 3.9.1-2.fc39 fedora 425 k nspr x86_64 4.35.0-24.fc39 updates 137 k nss x86_64 3.105.0-1.fc39 updates 708 k nss-softokn x86_64 3.105.0-1.fc39 updates 422 k nss-softokn-freebl x86_64 3.105.0-1.fc39 updates 324 k nss-sysinit x86_64 3.105.0-1.fc39 updates 18 k nss-util x86_64 3.105.0-1.fc39 updates 88 k openblas x86_64 0.3.21-6.fc39 fedora 35 k openblas-openmp x86_64 0.3.21-6.fc39 fedora 4.9 M openblas-openmp64 x86_64 0.3.21-6.fc39 fedora 4.8 M pango x86_64 1.51.0-1.fc39 fedora 343 k pcre2-devel x86_64 10.42-1.fc39.2 fedora 505 k pcre2-utf16 x86_64 10.42-1.fc39.2 fedora 212 k pcre2-utf32 x86_64 10.42-1.fc39.2 fedora 200 k pixman x86_64 0.42.2-2.fc39 fedora 288 k python-pip-wheel noarch 23.2.1-2.fc39 updates 1.5 M python3 x86_64 3.12.7-1.fc39 updates 28 k python3-libs x86_64 3.12.7-1.fc39 updates 9.2 M python3-setuptools noarch 67.7.2-8.fc39 updates 1.5 M sysprof-capture-devel x86_64 45.1-1.fc39 updates 59 k tcl x86_64 1:8.6.12-5.fc39 fedora 1.1 M tcl-devel x86_64 1:8.6.12-5.fc39 fedora 169 k tk x86_64 1:8.6.12-5.fc39 fedora 1.6 M tk-devel x86_64 1:8.6.12-5.fc39 fedora 537 k tre x86_64 0.8.0-41.20140228gitc2f5d13.fc39 fedora 43 k tre-common noarch 0.8.0-41.20140228gitc2f5d13.fc39 fedora 31 k tre-devel x86_64 0.8.0-41.20140228gitc2f5d13.fc39 fedora 12 k ttmkfdir x86_64 3.0.9-69.fc39 fedora 56 k tzdata noarch 2024a-2.fc39 updates 715 k tzdata-java noarch 2024a-2.fc39 updates 208 k xdg-utils noarch 1.1.3-15.fc39 fedora 77 k xml-common noarch 0.6.3-61.fc39 fedora 31 k xorg-x11-fonts-Type1 noarch 7.5-36.fc39 fedora 504 k xorg-x11-proto-devel noarch 2023.2-2.fc39 fedora 298 k xz-devel x86_64 5.4.4-1.fc39 fedora 66 k zlib-devel x86_64 1.2.13-4.fc39 fedora 45 k Transaction Summary ========================================================================================== Install 166 Packages Total download size: 278 M Installed size: 878 M Downloading Packages: (1/166): R-CRAN-CompQuadForm-1.4.3-3.fc39.copr6 3.6 MB/s | 57 kB 00:00 (2/166): R-CRAN-Matrix-1.6.5-1.fc39.copr6886765 82 MB/s | 4.1 MB 00:00 (3/166): R-CRAN-Rcpp-1.0.13.1-1.fc39.copr820407 123 MB/s | 2.0 MB 00:00 (4/166): R-CRAN-RcppArmadillo-14.2.0.1-1.fc39.c 155 MB/s | 920 kB 00:00 (5/166): R-CRAN-RNOmni-1.0.1.2-1.fc39.copr63958 620 kB/s | 199 kB 00:00 (6/166): R-CRAN-SPAtest-3.1.2-1.fc39.copr628080 277 kB/s | 132 kB 00:00 (7/166): R-CRAN-glue-1.8.0-1.fc39.copr8094211.x 30 MB/s | 172 kB 00:00 (8/166): R-CRAN-lattice-0.22.6-1.fc39.copr73070 71 MB/s | 1.4 MB 00:00 (9/166): R-CRAN-plyr-1.8.9-1.fc39.copr6484845.x 118 MB/s | 856 kB 00:00 (10/166): R-rpm-macros-1.2.1-7.fc39.noarch.rpm 473 kB/s | 11 kB 00:00 (11/166): abattis-cantarell-vf-fonts-0.301-10.f 22 MB/s | 121 kB 00:00 (12/166): avahi-libs-0.8-24.fc39.x86_64.rpm 21 MB/s | 67 kB 00:00 (13/166): brotli-1.1.0-1.fc39.x86_64.rpm 7.7 MB/s | 20 kB 00:00 (14/166): brotli-devel-1.1.0-1.fc39.x86_64.rpm 12 MB/s | 34 kB 00:00 (15/166): bzip2-devel-1.0.8-16.fc39.x86_64.rpm 56 MB/s | 214 kB 00:00 (16/166): cairo-1.18.0-1.fc39.x86_64.rpm 150 MB/s | 710 kB 00:00 (17/166): R-CRAN-RSpectra-0.16.2-1.fc39.copr775 507 kB/s | 440 kB 00:00 (18/166): dbus-libs-1.14.10-1.fc39.x86_64.rpm 66 MB/s | 156 kB 00:00 (19/166): default-fonts-core-sans-4.0-9.fc39.no 12 MB/s | 32 kB 00:00 (20/166): copy-jdk-configs-4.1-3.fc39.noarch.rp 2.1 MB/s | 28 kB 00:00 (21/166): desktop-file-utils-0.26-9.fc39.x86_64 33 MB/s | 72 kB 00:00 (22/166): fonts-filesystem-2.0.5-12.fc39.noarch 3.5 MB/s | 8.2 kB 00:00 (23/166): freetype-2.13.1-2.fc39.x86_64.rpm 91 MB/s | 414 kB 00:00 (24/166): R-CRAN-SKAT-2.2.5-1.fc39.copr6665476. 1.6 MB/s | 1.3 MB 00:00 (25/166): freetype-devel-2.13.1-2.fc39.x86_64.r 155 MB/s | 950 kB 00:00 (26/166): fribidi-1.0.13-2.fc39.x86_64.rpm 23 MB/s | 91 kB 00:00 (27/166): gc-8.2.2-4.fc39.x86_64.rpm 41 MB/s | 110 kB 00:00 (28/166): gettext-envsubst-0.22-2.fc39.x86_64.r 16 MB/s | 36 kB 00:00 (29/166): gettext-libs-0.22-2.fc39.x86_64.rpm 56 MB/s | 328 kB 00:00 (30/166): gettext-0.22-2.fc39.x86_64.rpm 133 MB/s | 1.1 MB 00:00 (31/166): gettext-runtime-0.22-2.fc39.x86_64.rp 21 MB/s | 120 kB 00:00 (32/166): graphite2-1.3.14-12.fc39.x86_64.rpm 25 MB/s | 95 kB 00:00 (33/166): graphite2-devel-1.3.14-12.fc39.x86_64 5.4 MB/s | 20 kB 00:00 (34/166): harfbuzz-devel-8.2.1-2.fc39.x86_64.rp 76 MB/s | 450 kB 00:00 (35/166): harfbuzz-8.2.1-2.fc39.x86_64.rpm 100 MB/s | 975 kB 00:00 (36/166): javapackages-filesystem-6.1.0-10.fc39 886 kB/s | 12 kB 00:00 (37/166): harfbuzz-icu-8.2.1-2.fc39.x86_64.rpm 997 kB/s | 17 kB 00:00 (38/166): guile22-2.2.7-9.fc39.x86_64.rpm 172 MB/s | 6.5 MB 00:00 (39/166): libICE-1.0.10-11.fc39.x86_64.rpm 5.7 MB/s | 70 kB 00:00 (40/166): jbigkit-libs-2.1-26.fc39.x86_64.rpm 3.5 MB/s | 53 kB 00:00 (41/166): libSM-1.2.3-13.fc39.x86_64.rpm 13 MB/s | 41 kB 00:00 (42/166): libXau-1.0.11-3.fc39.x86_64.rpm 11 MB/s | 31 kB 00:00 (43/166): libXau-devel-1.0.11-3.fc39.x86_64.rpm 4.8 MB/s | 14 kB 00:00 (44/166): libXcomposite-0.4.5-10.fc39.x86_64.rp 6.6 MB/s | 23 kB 00:00 (45/166): libXext-1.3.5-3.fc39.x86_64.rpm 11 MB/s | 39 kB 00:00 (46/166): libXft-2.3.8-3.fc39.x86_64.rpm 18 MB/s | 72 kB 00:00 (47/166): libXi-1.8.1-2.fc39.x86_64.rpm 14 MB/s | 40 kB 00:00 (48/166): libXft-devel-2.3.8-3.fc39.x86_64.rpm 14 MB/s | 50 kB 00:00 (49/166): libXrender-0.9.11-3.fc39.x86_64.rpm 8.0 MB/s | 27 kB 00:00 (50/166): libXmu-1.1.4-3.fc39.x86_64.rpm 20 MB/s | 76 kB 00:00 (51/166): libXrender-devel-0.9.11-3.fc39.x86_64 3.0 MB/s | 19 kB 00:00 (52/166): libXt-1.2.1-5.fc39.x86_64.rpm 50 MB/s | 178 kB 00:00 (53/166): libXtst-1.2.4-3.fc39.x86_64.rpm 6.3 MB/s | 20 kB 00:00 (54/166): libdatrie-0.2.13-7.fc39.x86_64.rpm 16 MB/s | 32 kB 00:00 (55/166): libb2-0.98.1-9.fc39.x86_64.rpm 8.3 MB/s | 25 kB 00:00 (56/166): libffi-devel-3.4.4-4.fc39.x86_64.rpm 6.2 MB/s | 29 kB 00:00 (57/166): libfontenc-1.1.6-3.fc39.x86_64.rpm 11 MB/s | 32 kB 00:00 (58/166): libicu-devel-73.2-2.fc39.x86_64.rpm 119 MB/s | 924 kB 00:00 (59/166): libjpeg-turbo-2.1.4-3.fc39.x86_64.rpm 22 MB/s | 183 kB 00:00 (60/166): liblerc-4.0.0-4.fc39.x86_64.rpm 38 MB/s | 201 kB 00:00 (61/166): libmpc-1.3.1-3.fc39.x86_64.rpm 12 MB/s | 70 kB 00:00 (62/166): libpng-1.6.37-15.fc39.x86_64.rpm 28 MB/s | 119 kB 00:00 (63/166): libpng-devel-1.6.37-15.fc39.x86_64.rp 33 MB/s | 291 kB 00:00 (64/166): libselinux-devel-3.5-5.fc39.x86_64.rp 22 MB/s | 151 kB 00:00 (65/166): libicu-73.2-2.fc39.x86_64.rpm 279 MB/s | 11 MB 00:00 (66/166): libthai-0.1.29-6.fc39.x86_64.rpm 18 MB/s | 213 kB 00:00 (67/166): libsepol-devel-3.5-2.fc39.x86_64.rpm 3.8 MB/s | 49 kB 00:00 (68/166): libwebp-1.3.2-2.fc39.x86_64.rpm 69 MB/s | 284 kB 00:00 (69/166): libxcb-1.13.1-12.fc39.x86_64.rpm 58 MB/s | 233 kB 00:00 (70/166): libxcb-devel-1.13.1-12.fc39.x86_64.rp 161 MB/s | 1.4 MB 00:00 (71/166): libxcrypt-devel-4.4.36-2.fc39.x86_64. 4.9 MB/s | 30 kB 00:00 (72/166): libxml2-devel-2.10.4-3.fc39.x86_64.rp 74 MB/s | 527 kB 00:00 (73/166): make-4.4.1-2.fc39.x86_64.rpm 155 MB/s | 589 kB 00:00 (74/166): lua-5.4.6-3.fc39.x86_64.rpm 29 MB/s | 191 kB 00:00 (75/166): mkfontscale-1.2.2-4.fc39.x86_64.rpm 13 MB/s | 32 kB 00:00 (76/166): mpdecimal-2.5.1-7.fc39.x86_64.rpm 32 MB/s | 89 kB 00:00 (77/166): nettle-3.9.1-2.fc39.x86_64.rpm 74 MB/s | 425 kB 00:00 (78/166): lua-posix-36.2.1-3.fc39.x86_64.rpm 9.8 MB/s | 143 kB 00:00 (79/166): openblas-0.3.21-6.fc39.x86_64.rpm 2.4 MB/s | 35 kB 00:00 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R-rpm-macros-1.2.1-7.fc39.noarch 138/166 Installing : R-littler-0.3.19-1.fc39.x86_64 139/166 Installing : R-CRAN-Rcpp-1.0.13.1-1.fc39.copr8204071.x86_64 140/166 Installing : R-CRAN-RSpectra-0.16.2-1.fc39.copr7752181.x86_64 141/166 Installing : R-CRAN-plyr-1.8.9-1.fc39.copr6484845.x86_64 142/166 Installing : dbus-libs-1:1.14.10-1.fc39.x86_64 143/166 Installing : avahi-libs-0.8-24.fc39.x86_64 144/166 Installing : cups-libs-1:2.4.11-1.fc39.x86_64 145/166 Installing : java-17-openjdk-headless-1:17.0.13.0.11-1.fc39.x 146/166 Running scriptlet: java-17-openjdk-headless-1:17.0.13.0.11-1.fc39.x 146/166 Installing : R-java-4.3.3-2.fc39.x86_64 147/166 Installing : java-17-openjdk-1:17.0.13.0.11-1.fc39.x86_64 148/166 Running scriptlet: java-17-openjdk-1:17.0.13.0.11-1.fc39.x86_64 148/166 Installing : java-17-openjdk-devel-1:17.0.13.0.11-1.fc39.x86_ 149/166 Running scriptlet: java-17-openjdk-devel-1:17.0.13.0.11-1.fc39.x86_ 149/166 Installing : brotli-1.1.0-1.fc39.x86_64 150/166 Installing : brotli-devel-1.1.0-1.fc39.x86_64 151/166 Installing : freetype-devel-2.13.1-2.fc39.x86_64 152/166 Installing : harfbuzz-devel-8.2.1-2.fc39.x86_64 153/166 Installing : fontconfig-devel-2.14.2-6.fc39.x86_64 154/166 Installing : libXft-devel-2.3.8-3.fc39.x86_64 155/166 Installing : tk-devel-1:8.6.12-5.fc39.x86_64 156/166 Installing : R-core-devel-4.3.3-2.fc39.x86_64 157/166 Installing : R-java-devel-4.3.3-2.fc39.x86_64 158/166 Installing : R-devel-4.3.3-2.fc39.x86_64 159/166 Installing : R-CRAN-RNOmni-1.0.1.2-1.fc39.copr6395801.x86_64 160/166 Installing : R-CRAN-SKAT-2.2.5-1.fc39.copr6665476.x86_64 161/166 Installing : R-CRAN-RcppArmadillo-14.2.0.1-1.fc39.copr8278649 162/166 Installing : R-CRAN-CompQuadForm-1.4.3-3.fc39.copr6279686.x86 163/166 Installing : R-CRAN-glue-1.8.0-1.fc39.copr8094211.x86_64 164/166 Installing : annobin-plugin-gcc-12.60-1.fc39.x86_64 165/166 Running scriptlet: annobin-plugin-gcc-12.60-1.fc39.x86_64 165/166 Installing : gcc-plugin-annobin-13.3.1-3.fc39.x86_64 166/166 Running scriptlet: gcc-plugin-annobin-13.3.1-3.fc39.x86_64 166/166 Running scriptlet: fontconfig-2.14.2-6.fc39.x86_64 166/166 Running scriptlet: copy-jdk-configs-4.1-3.fc39.noarch 166/166 Running scriptlet: crypto-policies-scripts-20231204-1.git1e3a2e4.fc 166/166 Running scriptlet: nss-3.105.0-1.fc39.x86_64 166/166 Running scriptlet: java-17-openjdk-headless-1:17.0.13.0.11-1.fc39.x 166/166 Running scriptlet: java-17-openjdk-1:17.0.13.0.11-1.fc39.x86_64 166/166 Running scriptlet: java-17-openjdk-devel-1:17.0.13.0.11-1.fc39.x86_ 166/166 Running scriptlet: gcc-plugin-annobin-13.3.1-3.fc39.x86_64 166/166 Installed products updated. Installed: R-CRAN-CompQuadForm-1.4.3-3.fc39.copr6279686.x86_64 R-CRAN-Matrix-1.6.5-1.fc39.copr6886765.x86_64 R-CRAN-RNOmni-1.0.1.2-1.fc39.copr6395801.x86_64 R-CRAN-RSpectra-0.16.2-1.fc39.copr7752181.x86_64 R-CRAN-Rcpp-1.0.13.1-1.fc39.copr8204071.x86_64 R-CRAN-RcppArmadillo-14.2.0.1-1.fc39.copr8278649.x86_64 R-CRAN-SKAT-2.2.5-1.fc39.copr6665476.x86_64 R-CRAN-SPAtest-3.1.2-1.fc39.copr6280801.noarch R-CRAN-glue-1.8.0-1.fc39.copr8094211.x86_64 R-CRAN-lattice-0.22.6-1.fc39.copr7307082.x86_64 R-CRAN-plyr-1.8.9-1.fc39.copr6484845.x86_64 R-core-4.3.3-2.fc39.x86_64 R-core-devel-4.3.3-2.fc39.x86_64 R-devel-4.3.3-2.fc39.x86_64 R-java-4.3.3-2.fc39.x86_64 R-java-devel-4.3.3-2.fc39.x86_64 R-littler-0.3.19-1.fc39.x86_64 R-rpm-macros-1.2.1-7.fc39.noarch abattis-cantarell-vf-fonts-0.301-10.fc39.noarch alsa-lib-1.2.12-1.fc39.x86_64 annobin-docs-12.60-1.fc39.noarch annobin-plugin-gcc-12.60-1.fc39.x86_64 avahi-libs-0.8-24.fc39.x86_64 brotli-1.1.0-1.fc39.x86_64 brotli-devel-1.1.0-1.fc39.x86_64 bzip2-devel-1.0.8-16.fc39.x86_64 cairo-1.18.0-1.fc39.x86_64 cmake-filesystem-3.30.5-1.fc39.x86_64 copy-jdk-configs-4.1-3.fc39.noarch cpp-13.3.1-3.fc39.x86_64 crypto-policies-scripts-20231204-1.git1e3a2e4.fc39.noarch cups-libs-1:2.4.11-1.fc39.x86_64 dbus-libs-1:1.14.10-1.fc39.x86_64 default-fonts-core-sans-4.0-9.fc39.noarch desktop-file-utils-0.26-9.fc39.x86_64 emacs-filesystem-1:29.4-2.fc39.noarch expat-2.6.3-1.fc39.x86_64 flexiblas-3.4.4-1.fc39.x86_64 flexiblas-devel-3.4.4-1.fc39.x86_64 flexiblas-netlib-3.4.4-1.fc39.x86_64 flexiblas-netlib64-3.4.4-1.fc39.x86_64 flexiblas-openblas-openmp-3.4.4-1.fc39.x86_64 flexiblas-openblas-openmp64-3.4.4-1.fc39.x86_64 fontconfig-2.14.2-6.fc39.x86_64 fontconfig-devel-2.14.2-6.fc39.x86_64 fonts-filesystem-1:2.0.5-12.fc39.noarch freetype-2.13.1-2.fc39.x86_64 freetype-devel-2.13.1-2.fc39.x86_64 fribidi-1.0.13-2.fc39.x86_64 gc-8.2.2-4.fc39.x86_64 gcc-13.3.1-3.fc39.x86_64 gcc-c++-13.3.1-3.fc39.x86_64 gcc-gfortran-13.3.1-3.fc39.x86_64 gcc-plugin-annobin-13.3.1-3.fc39.x86_64 gettext-0.22-2.fc39.x86_64 gettext-envsubst-0.22-2.fc39.x86_64 gettext-libs-0.22-2.fc39.x86_64 gettext-runtime-0.22-2.fc39.x86_64 glib2-2.78.6-1.fc39.x86_64 glib2-devel-2.78.6-1.fc39.x86_64 glibc-devel-2.38-19.fc39.x86_64 glibc-headers-x86-2.38-19.fc39.noarch gnutls-3.8.6-1.fc39.x86_64 google-noto-fonts-common-20240101-1.fc39.noarch google-noto-sans-vf-fonts-20240101-1.fc39.noarch graphite2-1.3.14-12.fc39.x86_64 graphite2-devel-1.3.14-12.fc39.x86_64 guile22-2.2.7-9.fc39.x86_64 harfbuzz-8.2.1-2.fc39.x86_64 harfbuzz-devel-8.2.1-2.fc39.x86_64 harfbuzz-icu-8.2.1-2.fc39.x86_64 java-17-openjdk-1:17.0.13.0.11-1.fc39.x86_64 java-17-openjdk-devel-1:17.0.13.0.11-1.fc39.x86_64 java-17-openjdk-headless-1:17.0.13.0.11-1.fc39.x86_64 javapackages-filesystem-6.1.0-10.fc39.noarch jbigkit-libs-2.1-26.fc39.x86_64 kernel-headers-6.11.3-100.fc39.x86_64 libICE-1.0.10-11.fc39.x86_64 libRmath-4.3.3-2.fc39.x86_64 libRmath-devel-4.3.3-2.fc39.x86_64 libSM-1.2.3-13.fc39.x86_64 libX11-1.8.9-1.fc39.x86_64 libX11-common-1.8.9-1.fc39.noarch libX11-devel-1.8.9-1.fc39.x86_64 libX11-xcb-1.8.9-1.fc39.x86_64 libXau-1.0.11-3.fc39.x86_64 libXau-devel-1.0.11-3.fc39.x86_64 libXcomposite-0.4.5-10.fc39.x86_64 libXext-1.3.5-3.fc39.x86_64 libXft-2.3.8-3.fc39.x86_64 libXft-devel-2.3.8-3.fc39.x86_64 libXi-1.8.1-2.fc39.x86_64 libXmu-1.1.4-3.fc39.x86_64 libXrender-0.9.11-3.fc39.x86_64 libXrender-devel-0.9.11-3.fc39.x86_64 libXt-1.2.1-5.fc39.x86_64 libXtst-1.2.4-3.fc39.x86_64 libb2-0.98.1-9.fc39.x86_64 libblkid-devel-2.39.4-1.fc39.x86_64 libdatrie-0.2.13-7.fc39.x86_64 libffi-devel-3.4.4-4.fc39.x86_64 libfontenc-1.1.6-3.fc39.x86_64 libgfortran-13.3.1-3.fc39.x86_64 libicu-73.2-2.fc39.x86_64 libicu-devel-73.2-2.fc39.x86_64 libjpeg-turbo-2.1.4-3.fc39.x86_64 liblerc-4.0.0-4.fc39.x86_64 libmount-devel-2.39.4-1.fc39.x86_64 libmpc-1.3.1-3.fc39.x86_64 libpng-2:1.6.37-15.fc39.x86_64 libpng-devel-2:1.6.37-15.fc39.x86_64 libquadmath-13.3.1-3.fc39.x86_64 libquadmath-devel-13.3.1-3.fc39.x86_64 libselinux-devel-3.5-5.fc39.x86_64 libsepol-devel-3.5-2.fc39.x86_64 libstdc++-devel-13.3.1-3.fc39.x86_64 libthai-0.1.29-6.fc39.x86_64 libtiff-4.4.0-10.fc39.x86_64 libtirpc-devel-1.3.6-0.fc39.x86_64 libwebp-1.3.2-2.fc39.x86_64 libxcb-1.13.1-12.fc39.x86_64 libxcb-devel-1.13.1-12.fc39.x86_64 libxcrypt-devel-4.4.36-2.fc39.x86_64 libxml2-devel-2.10.4-3.fc39.x86_64 lksctp-tools-1.0.20-1.fc39.x86_64 lua-5.4.6-3.fc39.x86_64 lua-posix-36.2.1-3.fc39.x86_64 make-1:4.4.1-2.fc39.x86_64 mkfontscale-1.2.2-4.fc39.x86_64 mpdecimal-2.5.1-7.fc39.x86_64 nettle-3.9.1-2.fc39.x86_64 nspr-4.35.0-24.fc39.x86_64 nss-3.105.0-1.fc39.x86_64 nss-softokn-3.105.0-1.fc39.x86_64 nss-softokn-freebl-3.105.0-1.fc39.x86_64 nss-sysinit-3.105.0-1.fc39.x86_64 nss-util-3.105.0-1.fc39.x86_64 openblas-0.3.21-6.fc39.x86_64 openblas-openmp-0.3.21-6.fc39.x86_64 openblas-openmp64-0.3.21-6.fc39.x86_64 pango-1.51.0-1.fc39.x86_64 pcre2-devel-10.42-1.fc39.2.x86_64 pcre2-utf16-10.42-1.fc39.2.x86_64 pcre2-utf32-10.42-1.fc39.2.x86_64 pixman-0.42.2-2.fc39.x86_64 python-pip-wheel-23.2.1-2.fc39.noarch python3-3.12.7-1.fc39.x86_64 python3-libs-3.12.7-1.fc39.x86_64 python3-setuptools-67.7.2-8.fc39.noarch sysprof-capture-devel-45.1-1.fc39.x86_64 tcl-1:8.6.12-5.fc39.x86_64 tcl-devel-1:8.6.12-5.fc39.x86_64 tk-1:8.6.12-5.fc39.x86_64 tk-devel-1:8.6.12-5.fc39.x86_64 tre-0.8.0-41.20140228gitc2f5d13.fc39.x86_64 tre-common-0.8.0-41.20140228gitc2f5d13.fc39.noarch tre-devel-0.8.0-41.20140228gitc2f5d13.fc39.x86_64 ttmkfdir-3.0.9-69.fc39.x86_64 tzdata-2024a-2.fc39.noarch tzdata-java-2024a-2.fc39.noarch xdg-utils-1.1.3-15.fc39.noarch xml-common-0.6.3-61.fc39.noarch xorg-x11-fonts-Type1-7.5-36.fc39.noarch xorg-x11-proto-devel-2023.2-2.fc39.noarch xz-devel-5.4.4-1.fc39.x86_64 zlib-devel-1.2.13-4.fc39.x86_64 Complete! Finish: build setup for R-CRAN-AllelicSeries-0.1.1.1-1.fc39.copr8305235.src.rpm Start: rpmbuild R-CRAN-AllelicSeries-0.1.1.1-1.fc39.copr8305235.src.rpm warning: source_date_epoch_from_changelog set but %changelog is missing Building target platforms: x86_64 Building for target x86_64 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.53TgU7 + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf AllelicSeries + /usr/bin/mkdir -p AllelicSeries + cd AllelicSeries + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/AllelicSeries_0.1.1.1.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + rm -rf /builddir/build/BUILD/AllelicSeries-SPECPARTS + /usr/bin/mkdir -p /builddir/build/BUILD/AllelicSeries-SPECPARTS + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + find -type f -executable -exec grep -Iq . '{}' ';' -exec sed -i -e '$a\' '{}' ';' + '[' -d AllelicSeries/src ']' + find AllelicSeries/src -type f -exec sed -i s@/usr/bin/strip@/usr/bin/true@g '{}' ';' + '[' -d AllelicSeries/src ']' + find AllelicSeries/src/Makevars AllelicSeries/src/Makevars.win -type f -exec sed -i s@-g0@@g '{}' ';' + find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' '{}' ';' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.UhKgtj + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd AllelicSeries + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.098hue + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/R-CRAN-AllelicSeries-0.1.1.1-1.fc39.copr8305235.x86_64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/R-CRAN-AllelicSeries-0.1.1.1-1.fc39.copr8305235.x86_64 ++ dirname /builddir/build/BUILDROOT/R-CRAN-AllelicSeries-0.1.1.1-1.fc39.copr8305235.x86_64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/R-CRAN-AllelicSeries-0.1.1.1-1.fc39.copr8305235.x86_64 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd AllelicSeries + mkdir -p /builddir/build/BUILDROOT/R-CRAN-AllelicSeries-0.1.1.1-1.fc39.copr8305235.x86_64/usr/local/lib/R/library + /usr/bin/R CMD INSTALL -l /builddir/build/BUILDROOT/R-CRAN-AllelicSeries-0.1.1.1-1.fc39.copr8305235.x86_64/usr/local/lib/R/library AllelicSeries * installing *source* package ‘AllelicSeries’ ... ** package ‘AllelicSeries’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++ (GCC) 13.3.1 20240913 (Red Hat 13.3.1-3)’ g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppArmadillo/include' -I/usr/local/include -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c RcppExports.cpp -o RcppExports.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppArmadillo/include' -I/usr/local/include -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c counting.cpp -o counting.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppArmadillo/include' -I/usr/local/include -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c lm.cpp -o lm.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppArmadillo/include' -I/usr/local/include -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c score.cpp -o score.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppArmadillo/include' -I/usr/local/include -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c skat.cpp -o skat.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppArmadillo/include' -I/usr/local/include -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c sumstats.cpp -o sumstats.o sumstats.cpp: In function ‘arma::mat AnnoMat(const arma::colvec&, int)’: sumstats.cpp:70:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare] 70 | for (int j=0; j