olink_norm_input_check {OlinkAnalyze}R Documentation

Description

This function is a wrapper of multiple help functions which check the inputs of the olink_normalization function.

Usage

olink_norm_input_check(
  df1,
  df2,
  overlapping_samples_df1,
  overlapping_samples_df2,
  df1_project_nr,
  df2_project_nr,
  reference_project,
  reference_medians
)

Arguments

df1

First dataset to be used in normalization (required).

df2

Second dataset to be used in normalization.

overlapping_samples_df1

Samples to be used for adjustment factor calculation in df1 (required).

overlapping_samples_df2

Samples to be used for adjustment factor calculation in df2.

df1_project_nr

Project name of first dataset (df1).

df2_project_nr

Project name of first dataset (df2).

reference_project

Project name of reference_project. Should be one of df1_project_nr or df2_project_nr. Indicates the project to which the other project is adjusted to.

reference_medians

Dataset with columns "OlinkID" and "Reference_NPX". Used for reference median normalization.

Details

The following checks are performed:

Value

Named list of updated inputs to use for normalization:

Author(s)

Klev Diamanti


[Package OlinkAnalyze version 4.0.2 Index]