This report is automatically generated with the R
package knitr
(version 1.5
)
.
# Chapter 20 - Ten Tips on Working with Packages Poking Around the Nooks and Crannies of # CRAN options(repos = c(CRAN = "http://cran.ma.imperial.ac.uk/")) ## Finding Interesting Packages Installing Packages install.packages("fortunes")
## Error in install.packages : Updating loaded packages
## Loading Packages library("fortunes") ## Reading the Package Manual and Vignette library(help = fortunes) vignette("fortunes") ## Updating Packages update.packages()
## Warning: package 'arules' in library 'C:/Revolution/R-Enterprise-7.1/R-3.0.2/library' will not be updated ## Warning: package 'car' in library 'C:/Revolution/R-Enterprise-7.1/R-3.0.2/library' will not be updated ## Warning: package 'class' in library 'C:/Revolution/R-Enterprise-7.1/R-3.0.2/library' will not be updated ## Warning: package 'forecast' in library 'C:/Revolution/R-Enterprise-7.1/R-3.0.2/library' will not be updated ## Warning: package 'Hmisc' in library 'C:/Revolution/R-Enterprise-7.1/R-3.0.2/library' will not be updated ## Warning: package 'igraph' in library 'C:/Revolution/R-Enterprise-7.1/R-3.0.2/library' will not be updated ## Warning: package 'KernSmooth' in library 'C:/Revolution/R-Enterprise-7.1/R-3.0.2/library' will not be updated ## Warning: package 'MASS' in library 'C:/Revolution/R-Enterprise-7.1/R-3.0.2/library' will not be updated ## Warning: package 'Matrix' in library 'C:/Revolution/R-Enterprise-7.1/R-3.0.2/library' will not be updated ## Warning: package 'nnet' in library 'C:/Revolution/R-Enterprise-7.1/R-3.0.2/library' will not be updated ## Warning: package 'plyr' in library 'C:/Revolution/R-Enterprise-7.1/R-3.0.2/library' will not be updated ## Warning: package 'Rcpp' in library 'C:/Revolution/R-Enterprise-7.1/R-3.0.2/library' will not be updated ## Warning: package 'RcppArmadillo' in library 'C:/Revolution/R-Enterprise-7.1/R-3.0.2/library' will not be updated ## Warning: package 'rgeos' in library 'C:/Revolution/R-Enterprise-7.1/R-3.0.2/library' will not be updated ## Warning: package 'rJava' in library 'C:/Revolution/R-Enterprise-7.1/R-3.0.2/library' will not be updated ## Warning: package 'rpart' in library 'C:/Revolution/R-Enterprise-7.1/R-3.0.2/library' will not be updated ## Warning: package 'rpart.plot' in library 'C:/Revolution/R-Enterprise-7.1/R-3.0.2/library' will not be updated ## Warning: package 'scales' in library 'C:/Revolution/R-Enterprise-7.1/R-3.0.2/library' will not be updated ## Warning: package 'sp' in library 'C:/Revolution/R-Enterprise-7.1/R-3.0.2/library' will not be updated ## Warning: package 'zoo' in library 'C:/Revolution/R-Enterprise-7.1/R-3.0.2/library' will not be updated
## arm : ## Version 1.6-10 installed in C:/Users/Andrie/Documents/R/win-library/3.0 ## Version 1.7-03 available at http://cran.ma.imperial.ac.uk ## arules : ## Version 1.1-1 installed in C:/Users/Andrie/Documents/R/win-library/3.0 ## Version 1.1-2 available at http://cran.ma.imperial.ac.uk ## BH : ## Version 1.51.0-4 installed in C:/Users/Andrie/Documents/R/win-library/3.0 ## Version 1.54.0-2 available at http://cran.ma.imperial.ac.uk ## bit : ## Version 1.1-11 installed in C:/Users/Andrie/Documents/R/win-library/3.0 ## Version 1.1-12 available at http://cran.ma.imperial.ac.uk ## cancelled by user
## Unloading Packages search()
## [1] ".GlobalEnv" "package:fortunes" "package:BiocInstaller" ## [4] "package:ggplot2" "package:reshape2" "package:sos" ## [7] "package:brew" "package:stringr" "package:knitr" ## [10] "package:plyr" "tools:rstudio" "package:Revobase" ## [13] "package:RevoMods" "package:RevoScaleR" "package:lattice" ## [16] "package:rpart" "package:stats" "package:graphics" ## [19] "package:grDevices" "package:utils" "package:datasets" ## [22] "package:methods" "Autoloads" "package:base"
detach(package:fortunes, unload = TRUE) ## Forging Ahead with R-Forge install.packages("data.table", repos = "http://R-Forge.R-project.org")
## package 'data.table' successfully unpacked and MD5 sums checked ## ## The downloaded binary packages are in ## C:\Users\Andrie\AppData\Local\Temp\RtmpKC3x2f\downloaded_packages
## Conducting Installations from BioConductor source("http://bioconductor.org/biocLite.R")
## Reading the R Manual
The R session information (including the OS info, R version and all packages used):
sessionInfo()
## R version 3.0.2 (2013-09-25) ## Platform: x86_64-w64-mingw32/x64 (64-bit) ## ## locale: ## [1] LC_COLLATE=English_United Kingdom.1252 LC_CTYPE=English_United Kingdom.1252 ## [3] LC_MONETARY=English_United Kingdom.1252 LC_NUMERIC=C ## [5] LC_TIME=English_United Kingdom.1252 ## ## attached base packages: ## [1] stats graphics grDevices utils datasets methods base ## ## other attached packages: ## [1] BiocInstaller_1.12.1 ggplot2_0.9.3.1 reshape2_1.2.2 sos_1.3-8 ## [5] brew_1.0-6 stringr_0.6.2 knitr_1.5 plyr_1.8 ## [9] Revobase_7.1.0 RevoMods_7.1.0 RevoScaleR_7.1.0 lattice_0.20-27 ## [13] rpart_4.1-2 ## ## loaded via a namespace (and not attached): ## [1] codetools_0.2-8 colorspace_1.2-4 dichromat_2.0-0 digest_0.6.4 ## [5] evaluate_0.5.1 foreach_1.4.1 formatR_0.10 grid_3.0.2 ## [9] gtable_0.1.2 highr_0.3 iterators_1.0.6 labeling_0.2 ## [13] MASS_7.3-29 munsell_0.4.2 proto_0.3-10 RColorBrewer_1.0-5 ## [17] scales_0.2.3 tools_3.0.2
Sys.time()
## [1] "2014-05-13 15:07:17 BST"