%global __brp_check_rpaths %{nil}
%global packname  CpGFilter
%global packver   1.1
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          1.1
Release:          3%{?dist}%{?buildtag}
Summary:          CpG Filtering Method Based on Intra-Class CorrelationCoefficients

License:          GPL-3
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel >= 3.1.0
Requires:         R-core >= 3.1.0
BuildArch:        noarch
BuildRequires:    R-stats 
BuildRequires:    R-CRAN-matrixStats 
Requires:         R-stats 
Requires:         R-CRAN-matrixStats 

%description
Filter CpGs based on Intra-class Correlation Coefficients (ICCs) when
replicates are available. ICCs are calculated by fitting linear mixed
effects models to all samples including the un-replicated samples.
Including the large number of un-replicated samples improves ICC estimates
dramatically. The method accommodates any replicate design.

%prep
%setup -q -c -n %{packname}


%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css

%files
%{rlibdir}/%{packname}