%global __brp_check_rpaths %{nil} %global __requires_exclude ^libmpi %global packname GeneScape %global packver 1.0 %global rlibdir /usr/local/lib/R/library Name: R-CRAN-%{packname} Version: 1.0 Release: 1%{?dist}%{?buildtag} Summary: Simulation of Single Cell RNA-Seq Data with Complex Structure License: GPL (>= 3) URL: https://cran.r-project.org/package=%{packname} Source0: %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz BuildRequires: R-devel Requires: R-core BuildArch: noarch BuildRequires: R-CRAN-MASS >= 7.3.53.1 BuildRequires: R-CRAN-corpcor >= 1.6.10 BuildRequires: R-stats Requires: R-CRAN-MASS >= 7.3.53.1 Requires: R-CRAN-corpcor >= 1.6.10 Requires: R-stats %description Simulating single cell RNA-seq data with complicated structure. This package is developed based on the Splat method (Zappia, Phipson and Oshlack (2017) ). 'GeneScape' incorporates additional features to simulate single cell RNA-seq data with complicated differential expression and correlation structures, such as sub-cell-types, correlated genes (pathway genes) and hub genes. %prep %setup -q -c -n %{packname} # fix end of executable files find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \; # prevent binary stripping [ -d %{packname}/src ] && find %{packname}/src -type f -exec \ sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true [ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \ sed -i 's@-g0@@g' {} \; || true # don't allow local prefix in executable scripts find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \; %build %install mkdir -p %{buildroot}%{rlibdir} %{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname} test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so) rm -f %{buildroot}%{rlibdir}/R.css # remove buildroot from installed files find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \; %files %{rlibdir}/%{packname}