%global __brp_check_rpaths %{nil}
%global __requires_exclude ^libmpi
%global packname  reglogit
%global packver   1.2-7
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          1.2.7
Release:          1%{?dist}%{?buildtag}
Summary:          Simulation-Based Regularized Logistic Regression

License:          LGPL
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel >= 2.14.0
Requires:         R-core >= 2.14.0
BuildRequires:    R-methods 
BuildRequires:    R-CRAN-mvtnorm 
BuildRequires:    R-CRAN-boot 
BuildRequires:    R-CRAN-Matrix 
Requires:         R-methods 
Requires:         R-CRAN-mvtnorm 
Requires:         R-CRAN-boot 
Requires:         R-CRAN-Matrix 

%description
Regularized (polychotomous) logistic regression by Gibbs sampling. The
package implements subtly different MCMC schemes with varying efficiency
depending on the data type (binary v. binomial, say) and the desired
estimator (regularized maximum likelihood, or Bayesian maximum a
posteriori/posterior mean, etc.) through a unified interface. For details,
see Gramacy & Polson (2012 <doi:10.1214/12-BA719>).

%prep
%setup -q -c -n %{packname}

# fix end of executable files
find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
# prevent binary stripping
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
[ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \
  sed -i 's@-g0@@g' {} \; || true
# don't allow local prefix in executable scripts
find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;

%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
# remove buildroot from installed files
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;

%files
%{rlibdir}/%{packname}