%global __brp_check_rpaths %{nil} %global packname DDRTree %global packver 0.1.5 %global rlibdir /usr/local/lib/R/library Name: R-CRAN-%{packname} Version: 0.1.5 Release: 3%{?dist}%{?buildtag} Summary: Learning Principal Graphs with DDRTree License: Artistic License 2.0 URL: https://cran.r-project.org/package=%{packname} Source0: %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz BuildRequires: R-devel Requires: R-core BuildRequires: R-CRAN-irlba BuildRequires: R-CRAN-Rcpp BuildRequires: R-CRAN-RcppEigen BuildRequires: R-CRAN-BH Requires: R-CRAN-irlba Requires: R-CRAN-Rcpp %description Provides an implementation of the framework of reversed graph embedding (RGE) which projects data into a reduced dimensional space while constructs a principal tree which passes through the middle of the data simultaneously. DDRTree shows superiority to alternatives (Wishbone, DPT) for inferring the ordering as well as the intrinsic structure of the single cell genomics data. In general, it could be used to reconstruct the temporal progression as well as bifurcation structure of any datatype. %prep %setup -q -c -n %{packname} %build %install mkdir -p %{buildroot}%{rlibdir} %{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname} test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so) rm -f %{buildroot}%{rlibdir}/R.css %files %{rlibdir}/%{packname}