%global __brp_check_rpaths %{nil}
%global __requires_exclude ^libmpi
%global packname  estmeansd
%global packver   1.0.1
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          1.0.1
Release:          1%{?dist}%{?buildtag}
Summary:          Estimating the Sample Mean and Standard Deviation from Commonly Reported Quantiles in Meta-Analysis

License:          GPL (>= 3)
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel
Requires:         R-core
BuildArch:        noarch
BuildRequires:    R-graphics 
BuildRequires:    R-grDevices 
BuildRequires:    R-CRAN-metaBLUE 
BuildRequires:    R-stats 
Requires:         R-graphics 
Requires:         R-grDevices 
Requires:         R-CRAN-metaBLUE 
Requires:         R-stats 

%description
Implements the methods of McGrath et al. (2020)
<doi:10.1177/0962280219889080> and Cai et al. (2021)
<doi:10.1177/09622802211047348> for estimating the sample mean and
standard deviation from commonly reported quantiles in meta-analysis.
These methods can be applied to studies that report the sample median,
sample size, and one or both of (i) the sample minimum and maximum values
and (ii) the first and third quartiles. The corresponding standard error
estimators described by McGrath et al. (2023)
<doi:10.1177/09622802221139233> are also included.

%prep
%setup -q -c -n %{packname}

# fix end of executable files
find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
# prevent binary stripping
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
[ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \
  sed -i 's@-g0@@g' {} \; || true
# don't allow local prefix in executable scripts
find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;

%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
# remove buildroot from installed files
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;

%files
%{rlibdir}/%{packname}