%global __brp_check_rpaths %{nil}
%global packname  SCINA
%global packver   1.2.0
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          1.2.0
Release:          3%{?dist}%{?buildtag}
Summary:          A Semi-Supervised Category Identification and Assignment Tool

License:          GPL-2
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel >= 2.15.0
Requires:         R-core >= 2.15.0
BuildArch:        noarch
BuildRequires:    R-MASS 
BuildRequires:    R-CRAN-gplots 
Requires:         R-MASS 
Requires:         R-CRAN-gplots 

%description
An automatic cell type detection and assignment algorithm for single cell
RNA-Seq and Cytof/FACS data. 'SCINA' is capable of assigning cell type
identities to a pool of cells profiled by scRNA-Seq or Cytof/FACS data
with prior knowledge of markers, such as genes and protein symbols that
are highly or lowly expressed in each category. See Zhang Z, et al (2019)
<doi:10.3390/genes10070531> for more details.

%prep
%setup -q -c -n %{packname}


%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}

test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css

%files
%{rlibdir}/%{packname}