%global __brp_check_rpaths %{nil}
%global __requires_exclude ^libmpi
%global packname VIC5
%global packver 0.2.6
%global rlibdir /usr/local/lib/R/library
Name: R-CRAN-%{packname}
Version: 0.2.6
Release: 1%{?dist}%{?buildtag}
Summary: The Variable Infiltration Capacity (VIC) Hydrological Model
License: GPL-3
URL: https://cran.r-project.org/package=%{packname}
Source0: %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz
BuildRequires: R-devel >= 3.6.0
Requires: R-core >= 3.6.0
BuildRequires: R-stats
BuildRequires: R-utils
BuildRequires: R-CRAN-lubridate
BuildRequires: R-CRAN-Rcpp
BuildRequires: R-CRAN-foreach
BuildRequires: R-CRAN-RcppArmadillo
Requires: R-stats
Requires: R-utils
Requires: R-CRAN-lubridate
Requires: R-CRAN-Rcpp
Requires: R-CRAN-foreach
%description
The Variable Infiltration Capacity (VIC) model is a macroscale hydrologic
model that solves full water and energy balances, originally developed by
Xu Liang at the University of Washington (UW). The version of VIC source
code used is of 5.0.1 on , see Hamman et
al. (2018). Development and maintenance of the current official version of
the VIC model at present is led by the UW Hydro (Computational Hydrology
group) in the Department of Civil and Environmental Engineering at UW. VIC
is a research model and in its various forms it has been applied to most
of the major river basins around the world, as well as globally
.
References: "Liang, X., D. P. Lettenmaier, E. F. Wood, and S. J. Burges
(1994), A simple hydrologically based model of land surface water and
energy fluxes for general circulation models, J. Geophys. Res., 99(D7),
14415-14428, "; "Hamman, J. J., Nijssen, B., Bohn,
T. J., Gergel, D. R., and Mao, Y. (2018), The Variable Infiltration
Capacity model version 5 (VIC-5): infrastructure improvements for new
applications and reproducibility, Geosci. Model Dev., 11, 3481-3496,
".
%prep
%setup -q -c -n %{packname}
# fix end of executable files
find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
# prevent binary stripping
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
[ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \
sed -i 's@-g0@@g' {} \; || true
# don't allow local prefix in executable scripts
find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;
%build
%install
mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
# remove buildroot from installed files
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;
%files
%{rlibdir}/%{packname}