Warning: Permanently added '2620:52:3:1:dead:beef:cafe:c1d8' (ED25519) to the list of known hosts. cmd: ['copr-distgit-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-jzb4dsna/R-CRAN-RNewsflow rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading RNewsflow_1.2.8.tar.gz INFO: Reading stdout from command: curl --help all INFO: Calling: curl -H Pragma: -o RNewsflow_1.2.8.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/iucar/cran/R-CRAN-RNewsflow/RNewsflow_1.2.8.tar.gz/md5/c3fbda8c6c9cf6dd0a8febf5c298273e/RNewsflow_1.2.8.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 380k 100 380k 0 0 4242k 0 --:--:-- --:--:-- --:--:-- 4279k INFO: Reading stdout from command: md5sum RNewsflow_1.2.8.tar.gz Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-jzb4dsna/R-CRAN-RNewsflow/R-CRAN-RNewsflow.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-jzb4dsna/R-CRAN-RNewsflow --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1714185454.719422 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 5.5 starting (python version = 3.12.1, NVR = mock-5.5-1.fc39), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-jzb4dsna/R-CRAN-RNewsflow/R-CRAN-RNewsflow.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-jzb4dsna/R-CRAN-RNewsflow --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1714185454.719422 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-jzb4dsna/R-CRAN-RNewsflow/R-CRAN-RNewsflow.spec) Config(fedora-40-x86_64) Start: clean chroot Finish: clean chroot Mock Version: 5.5 INFO: Mock Version: 5.5 Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-40-x86_64-1714185454.719422/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf5 detected and used (fallback) INFO: Buildroot is handled by package management from host and used with --installroot: rpm-4.19.1.1-1.fc39.x86_64 rpm-sequoia-1.6.0-1.fc39.x86_64 python3-dnf-4.19.2-1.fc39.noarch python3-dnf-plugins-core-4.6.0-1.fc39.noarch yum-4.19.2-1.fc39.noarch dnf5-5.1.17-1.fc39.x86_64 dnf5-plugins-5.1.17-1.fc39.x86_64 Start: installing minimal buildroot with dnf5 Updating and loading repositories: updates 100% | 234.3 KiB/s | 21.8 KiB | 00m00s fedora 100% | 168.0 KiB/s | 22.7 KiB | 00m00s Copr repository 100% | 42.8 KiB/s | 1.5 KiB | 00m00s Copr repository 100% | 39.4 MiB/s | 13.5 MiB | 00m00s Repositories loaded. Package Arch Version Repository Size Installing group/module packages: bash x86_64 5.2.26-3.fc40 fedora 8.1 MiB bzip2 x86_64 1.0.8-18.fc40 fedora 91.7 KiB coreutils x86_64 9.4-6.fc40 fedora 5.8 MiB cpio x86_64 2.15-1.fc40 fedora 1.1 MiB diffutils x86_64 3.10-5.fc40 fedora 1.6 MiB fedora-release-common noarch 40-39 updates 19.1 KiB findutils x86_64 1:4.9.0-8.fc40 fedora 1.5 MiB gawk x86_64 5.3.0-3.fc40 fedora 1.7 MiB glibc-minimal-langpack x86_64 2.39-8.fc40 updates 0.0 B grep x86_64 3.11-7.fc40 fedora 1.0 MiB gzip x86_64 1.13-1.fc40 fedora 385.0 KiB info x86_64 7.1-2.fc40 fedora 357.8 KiB patch x86_64 2.7.6-24.fc40 fedora 262.8 KiB redhat-rpm-config noarch 286-1.fc40 fedora 185.2 KiB rpm-build x86_64 4.19.1.1-1.fc40 fedora 173.7 KiB sed x86_64 4.9-1.fc40 fedora 861.5 KiB shadow-utils x86_64 2:4.15.1-2.fc40 updates 4.1 MiB tar x86_64 2:1.35-3.fc40 fedora 2.9 MiB unzip x86_64 6.0-63.fc40 fedora 382.8 KiB util-linux x86_64 2.40-13.fc40 updates 3.7 MiB which x86_64 2.21-41.fc40 fedora 80.2 KiB xz x86_64 1:5.4.6-3.fc40 fedora 2.0 MiB Installing dependencies: alternatives x86_64 1.26-3.fc40 fedora 62.3 KiB ansible-srpm-macros noarch 1-14.fc40 fedora 35.7 KiB audit-libs x86_64 4.0.1-1.fc40 fedora 327.3 KiB authselect x86_64 1.5.0-5.fc40 fedora 153.6 KiB authselect-libs x86_64 1.5.0-5.fc40 fedora 818.3 KiB basesystem noarch 11-20.fc40 fedora 0.0 B binutils x86_64 2.41-34.fc40 fedora 26.4 MiB binutils-gold x86_64 2.41-34.fc40 fedora 2.0 MiB bzip2-libs x86_64 1.0.8-18.fc40 fedora 80.7 KiB ca-certificates noarch 2023.2.62_v7.0.401-6.fc40 fedora 2.3 MiB coreutils-common x86_64 9.4-6.fc40 fedora 11.4 MiB cracklib x86_64 2.9.11-5.fc40 fedora 238.9 KiB crypto-policies noarch 20240201-2.git9f501f3.fc40 fedora 149.3 KiB curl x86_64 8.6.0-8.fc40 updates 734.6 KiB cyrus-sasl-lib x86_64 2.1.28-19.fc40 fedora 2.3 MiB debugedit x86_64 5.0-14.fc40 fedora 199.0 KiB dwz x86_64 0.15-6.fc40 fedora 290.9 KiB ed x86_64 1.20.1-1.fc40 fedora 146.5 KiB efi-srpm-macros noarch 5-11.fc40 fedora 40.1 KiB elfutils x86_64 0.191-4.fc40 fedora 2.5 MiB elfutils-debuginfod-client x86_64 0.191-4.fc40 fedora 64.9 KiB elfutils-default-yama-scope noarch 0.191-4.fc40 fedora 1.8 KiB elfutils-libelf x86_64 0.191-4.fc40 fedora 1.2 MiB elfutils-libs x86_64 0.191-4.fc40 fedora 646.1 KiB fedora-gpg-keys noarch 40-1 fedora 125.0 KiB fedora-release noarch 40-39 updates 0.0 B fedora-release-identity-basic noarch 40-39 updates 654.0 B fedora-repos noarch 40-1 fedora 4.9 KiB file x86_64 5.45-4.fc40 fedora 103.5 KiB file-libs x86_64 5.45-4.fc40 fedora 9.9 MiB filesystem x86_64 3.18-8.fc40 fedora 106.0 B fonts-srpm-macros noarch 1:2.0.5-14.fc40 fedora 55.3 KiB forge-srpm-macros noarch 0.2.0-3.fc40 fedora 37.4 KiB fpc-srpm-macros noarch 1.3-12.fc40 fedora 144.0 B gdb-minimal x86_64 14.2-1.fc40 fedora 12.7 MiB gdbm x86_64 1:1.23-6.fc40 fedora 460.9 KiB gdbm-libs x86_64 1:1.23-6.fc40 fedora 121.9 KiB ghc-srpm-macros noarch 1.9-1.fc40 fedora 716.0 B glibc x86_64 2.39-8.fc40 updates 6.7 MiB glibc-common x86_64 2.39-8.fc40 updates 1.0 MiB glibc-gconv-extra x86_64 2.39-8.fc40 updates 7.8 MiB gmp x86_64 1:6.2.1-8.fc40 fedora 794.6 KiB gnat-srpm-macros noarch 6-5.fc40 fedora 1.0 KiB go-srpm-macros noarch 3.5.0-1.fc40 fedora 60.6 KiB jansson x86_64 2.13.1-9.fc40 fedora 88.3 KiB kernel-srpm-macros noarch 1.0-23.fc40 fedora 1.9 KiB keyutils-libs x86_64 1.6.3-3.fc40 fedora 54.4 KiB krb5-libs x86_64 1.21.2-5.fc40 fedora 2.3 MiB libacl x86_64 2.3.2-1.fc40 fedora 40.0 KiB libarchive x86_64 3.7.2-3.fc40 fedora 914.6 KiB libattr x86_64 2.5.2-3.fc40 fedora 28.5 KiB libblkid x86_64 2.40-13.fc40 updates 262.5 KiB libbrotli x86_64 1.1.0-3.fc40 fedora 829.5 KiB libcap x86_64 2.69-8.fc40 updates 219.8 KiB libcap-ng x86_64 0.8.4-4.fc40 fedora 73.1 KiB libcom_err x86_64 1.47.0-5.fc40 fedora 67.2 KiB libcurl x86_64 8.6.0-8.fc40 updates 772.8 KiB libeconf x86_64 0.6.2-1.fc40 fedora 58.0 KiB libevent x86_64 2.1.12-12.fc40 fedora 895.6 KiB libfdisk x86_64 2.40-13.fc40 updates 362.9 KiB libffi x86_64 3.4.4-7.fc40 fedora 81.6 KiB libgcc x86_64 14.0.1-0.15.fc40 fedora 270.6 KiB libgomp x86_64 14.0.1-0.15.fc40 fedora 519.4 KiB libidn2 x86_64 2.3.7-1.fc40 fedora 329.1 KiB libmount x86_64 2.40-13.fc40 updates 351.8 KiB libnghttp2 x86_64 1.59.0-3.fc40 updates 166.1 KiB libnsl2 x86_64 2.0.1-1.fc40 fedora 57.9 KiB libpkgconf x86_64 2.1.0-1.fc40 fedora 74.2 KiB libpsl x86_64 0.21.5-3.fc40 fedora 80.5 KiB libpwquality x86_64 1.4.5-9.fc40 fedora 417.8 KiB libselinux x86_64 3.6-4.fc40 fedora 173.0 KiB libsemanage x86_64 3.6-3.fc40 fedora 293.5 KiB libsepol x86_64 3.6-3.fc40 fedora 802.0 KiB libsmartcols x86_64 2.40-13.fc40 updates 180.4 KiB libssh x86_64 0.10.6-5.fc40 fedora 509.3 KiB libssh-config noarch 0.10.6-5.fc40 fedora 277.0 B libstdc++ x86_64 14.0.1-0.15.fc40 fedora 2.8 MiB libtasn1 x86_64 4.19.0-6.fc40 fedora 175.7 KiB libtirpc x86_64 1.3.4-1.rc3.fc40 fedora 202.8 KiB libtool-ltdl x86_64 2.4.7-10.fc40 fedora 66.2 KiB libunistring x86_64 1.1-7.fc40 fedora 1.7 MiB libutempter x86_64 1.2.1-13.fc40 fedora 57.7 KiB libuuid x86_64 2.40-13.fc40 updates 37.4 KiB libverto x86_64 0.3.2-8.fc40 fedora 29.5 KiB libxcrypt x86_64 4.4.36-5.fc40 fedora 262.8 KiB libxml2 x86_64 2.12.6-1.fc40 updates 1.7 MiB libzstd x86_64 1.5.6-1.fc40 updates 787.9 KiB lua-libs x86_64 5.4.6-5.fc40 fedora 281.1 KiB lua-srpm-macros noarch 1-13.fc40 fedora 1.3 KiB lz4-libs x86_64 1.9.4-6.fc40 fedora 129.4 KiB mpfr x86_64 4.2.1-3.fc40 fedora 832.0 KiB ncurses-base noarch 6.4-12.20240127.fc40 fedora 326.2 KiB ncurses-libs x86_64 6.4-12.20240127.fc40 fedora 963.2 KiB ocaml-srpm-macros noarch 9-3.fc40 fedora 1.9 KiB openblas-srpm-macros noarch 2-16.fc40 fedora 104.0 B openldap x86_64 2.6.7-1.fc40 fedora 635.1 KiB openssl-libs x86_64 1:3.2.1-2.fc40 fedora 7.8 MiB p11-kit x86_64 0.25.3-4.fc40 fedora 2.2 MiB p11-kit-trust x86_64 0.25.3-4.fc40 fedora 391.4 KiB package-notes-srpm-macros noarch 0.5-11.fc40 fedora 1.6 KiB pam x86_64 1.6.0-2.fc40 fedora 1.8 MiB pam-libs x86_64 1.6.0-2.fc40 fedora 135.0 KiB pcre2 x86_64 10.42-2.fc40.2 fedora 637.6 KiB pcre2-syntax noarch 10.42-2.fc40.2 fedora 235.1 KiB perl-srpm-macros noarch 1-53.fc40 fedora 861.0 B pkgconf x86_64 2.1.0-1.fc40 fedora 82.4 KiB pkgconf-m4 noarch 2.1.0-1.fc40 fedora 13.9 KiB pkgconf-pkg-config x86_64 2.1.0-1.fc40 fedora 989.0 B popt x86_64 1.19-6.fc40 fedora 136.9 KiB publicsuffix-list-dafsa noarch 20240107-3.fc40 fedora 67.5 KiB pyproject-srpm-macros noarch 1.12.0-1.fc40 fedora 1.5 KiB python-srpm-macros noarch 3.12-7.fc40 fedora 50.1 KiB qt5-srpm-macros noarch 5.15.13-1.fc40 fedora 492.0 B qt6-srpm-macros noarch 6.7.0-1.fc40 updates 456.0 B readline x86_64 8.2-8.fc40 fedora 489.2 KiB rpm x86_64 4.19.1.1-1.fc40 fedora 3.0 MiB rpm-build-libs x86_64 4.19.1.1-1.fc40 fedora 198.4 KiB rpm-libs x86_64 4.19.1.1-1.fc40 fedora 709.9 KiB rpm-sequoia x86_64 1.6.0-2.fc40 fedora 2.2 MiB rust-srpm-macros noarch 26.2-1.fc40 fedora 4.8 KiB setup noarch 2.14.5-2.fc40 fedora 720.4 KiB sqlite-libs x86_64 3.45.1-2.fc40 fedora 1.4 MiB systemd-libs x86_64 255.4-1.fc40 fedora 1.9 MiB util-linux-core x86_64 2.40-13.fc40 updates 1.5 MiB xxhash-libs x86_64 0.8.2-2.fc40 fedora 88.5 KiB xz-libs x86_64 1:5.4.6-3.fc40 fedora 209.8 KiB zig-srpm-macros noarch 1-2.fc40 fedora 1.1 KiB zip x86_64 3.0-40.fc40 fedora 703.2 KiB zlib-ng-compat x86_64 2.1.6-2.fc40 fedora 134.0 KiB zstd x86_64 1.5.6-1.fc40 updates 1.7 MiB Installing groups: Buildsystem building group Transaction Summary: Installing: 152 packages Total size of inbound packages is 53 MiB. Need to download 0 B. After this operation 178 MiB will be used (install 178 MiB, remove 0 B). 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00m00s [ 64/154] Installing libtasn1-0:4.19.0- 100% | 173.3 MiB/s | 177.5 KiB | 00m00s [ 65/154] Installing libsmartcols-0:2.4 100% | 177.1 MiB/s | 181.4 KiB | 00m00s [ 66/154] Installing libcom_err-0:1.47. 100% | 66.7 MiB/s | 68.3 KiB | 00m00s [ 67/154] Installing libunistring-0:1.1 100% | 288.5 MiB/s | 1.7 MiB | 00m00s [ 68/154] Installing libidn2-0:2.3.7-1. 100% | 81.8 MiB/s | 335.0 KiB | 00m00s [ 69/154] Installing libpsl-0:0.21.5-3. 100% | 79.7 MiB/s | 81.6 KiB | 00m00s [ 70/154] Installing util-linux-core-0: 100% | 135.0 MiB/s | 1.5 MiB | 00m00s [ 71/154] Installing tar-2:1.35-3.fc40. 100% | 227.0 MiB/s | 3.0 MiB | 00m00s [ 72/154] Installing libsemanage-0:3.6- 100% | 96.1 MiB/s | 295.3 KiB | 00m00s [ 73/154] Installing shadow-utils-2:4.1 100% | 80.2 MiB/s | 4.2 MiB | 00m00s >>> Running pre-install scriptlet: libutempter-0:1.2.1-13.fc40.x86_64 >>> Stop pre-install scriptlet: libutempter-0:1.2.1-13.fc40.x86_64 [ 74/154] Installing libutempter-0:1.2. 100% | 29.2 MiB/s | 59.7 KiB | 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MiB/s | 182.0 KiB | 00m00s [151/154] Installing pyproject-srpm-mac 100% | 1.0 MiB/s | 2.1 KiB | 00m00s [152/154] Installing util-linux-0:2.40- 100% | 89.0 MiB/s | 3.7 MiB | 00m00s >>> Running post-install scriptlet: util-linux-0:2.40-13.fc40.x86_64 >>> Stop post-install scriptlet: util-linux-0:2.40-13.fc40.x86_64 [153/154] Installing which-0:2.21-41.fc 100% | 40.3 MiB/s | 82.4 KiB | 00m00s [154/154] Installing info-0:7.1-2.fc40. 100% | 280.0 KiB/s | 358.2 KiB | 00m01s >>> Running post-transaction scriptlet: filesystem-0:3.18-8.fc40.x86_64 >>> Stop post-transaction scriptlet: filesystem-0:3.18-8.fc40.x86_64 >>> Running post-transaction scriptlet: ca-certificates-0:2023.2.62_v7.0.401-6.f >>> Stop post-transaction scriptlet: ca-certificates-0:2023.2.62_v7.0.401-6.fc40 >>> Running post-transaction scriptlet: authselect-libs-0:1.5.0-5.fc40.x86_64 >>> Stop post-transaction scriptlet: authselect-libs-0:1.5.0-5.fc40.x86_64 >>> Running post-transaction scriptlet: rpm-0:4.19.1.1-1.fc40.x86_64 >>> Stop post-transaction scriptlet: rpm-0:4.19.1.1-1.fc40.x86_64 >>> Running trigger-install scriptlet: glibc-common-0:2.39-8.fc40.x86_64 >>> Stop trigger-install scriptlet: glibc-common-0:2.39-8.fc40.x86_64 >>> Running trigger-install scriptlet: info-0:7.1-2.fc40.x86_64 >>> Stop trigger-install scriptlet: info-0:7.1-2.fc40.x86_64 Finish: installing minimal buildroot with dnf5 Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: alternatives-1.26-3.fc40.x86_64 ansible-srpm-macros-1-14.fc40.noarch audit-libs-4.0.1-1.fc40.x86_64 authselect-1.5.0-5.fc40.x86_64 authselect-libs-1.5.0-5.fc40.x86_64 basesystem-11-20.fc40.noarch bash-5.2.26-3.fc40.x86_64 binutils-2.41-34.fc40.x86_64 binutils-gold-2.41-34.fc40.x86_64 bzip2-1.0.8-18.fc40.x86_64 bzip2-libs-1.0.8-18.fc40.x86_64 ca-certificates-2023.2.62_v7.0.401-6.fc40.noarch coreutils-9.4-6.fc40.x86_64 coreutils-common-9.4-6.fc40.x86_64 cpio-2.15-1.fc40.x86_64 cracklib-2.9.11-5.fc40.x86_64 crypto-policies-20240201-2.git9f501f3.fc40.noarch curl-8.6.0-8.fc40.x86_64 cyrus-sasl-lib-2.1.28-19.fc40.x86_64 debugedit-5.0-14.fc40.x86_64 diffutils-3.10-5.fc40.x86_64 dwz-0.15-6.fc40.x86_64 ed-1.20.1-1.fc40.x86_64 efi-srpm-macros-5-11.fc40.noarch elfutils-0.191-4.fc40.x86_64 elfutils-debuginfod-client-0.191-4.fc40.x86_64 elfutils-default-yama-scope-0.191-4.fc40.noarch elfutils-libelf-0.191-4.fc40.x86_64 elfutils-libs-0.191-4.fc40.x86_64 fedora-gpg-keys-40-1.noarch fedora-release-40-39.noarch fedora-release-common-40-39.noarch fedora-release-identity-basic-40-39.noarch fedora-repos-40-1.noarch file-5.45-4.fc40.x86_64 file-libs-5.45-4.fc40.x86_64 filesystem-3.18-8.fc40.x86_64 findutils-4.9.0-8.fc40.x86_64 fonts-srpm-macros-2.0.5-14.fc40.noarch forge-srpm-macros-0.2.0-3.fc40.noarch fpc-srpm-macros-1.3-12.fc40.noarch gawk-5.3.0-3.fc40.x86_64 gdb-minimal-14.2-1.fc40.x86_64 gdbm-1.23-6.fc40.x86_64 gdbm-libs-1.23-6.fc40.x86_64 ghc-srpm-macros-1.9-1.fc40.noarch glibc-2.39-8.fc40.x86_64 glibc-common-2.39-8.fc40.x86_64 glibc-gconv-extra-2.39-8.fc40.x86_64 glibc-minimal-langpack-2.39-8.fc40.x86_64 gmp-6.2.1-8.fc40.x86_64 gnat-srpm-macros-6-5.fc40.noarch go-srpm-macros-3.5.0-1.fc40.noarch gpg-pubkey-a15b79cc-63d04c2c grep-3.11-7.fc40.x86_64 gzip-1.13-1.fc40.x86_64 info-7.1-2.fc40.x86_64 jansson-2.13.1-9.fc40.x86_64 kernel-srpm-macros-1.0-23.fc40.noarch keyutils-libs-1.6.3-3.fc40.x86_64 krb5-libs-1.21.2-5.fc40.x86_64 libacl-2.3.2-1.fc40.x86_64 libarchive-3.7.2-3.fc40.x86_64 libattr-2.5.2-3.fc40.x86_64 libblkid-2.40-13.fc40.x86_64 libbrotli-1.1.0-3.fc40.x86_64 libcap-2.69-8.fc40.x86_64 libcap-ng-0.8.4-4.fc40.x86_64 libcom_err-1.47.0-5.fc40.x86_64 libcurl-8.6.0-8.fc40.x86_64 libeconf-0.6.2-1.fc40.x86_64 libevent-2.1.12-12.fc40.x86_64 libfdisk-2.40-13.fc40.x86_64 libffi-3.4.4-7.fc40.x86_64 libgcc-14.0.1-0.15.fc40.x86_64 libgomp-14.0.1-0.15.fc40.x86_64 libidn2-2.3.7-1.fc40.x86_64 libmount-2.40-13.fc40.x86_64 libnghttp2-1.59.0-3.fc40.x86_64 libnsl2-2.0.1-1.fc40.x86_64 libpkgconf-2.1.0-1.fc40.x86_64 libpsl-0.21.5-3.fc40.x86_64 libpwquality-1.4.5-9.fc40.x86_64 libselinux-3.6-4.fc40.x86_64 libsemanage-3.6-3.fc40.x86_64 libsepol-3.6-3.fc40.x86_64 libsmartcols-2.40-13.fc40.x86_64 libssh-0.10.6-5.fc40.x86_64 libssh-config-0.10.6-5.fc40.noarch libstdc++-14.0.1-0.15.fc40.x86_64 libtasn1-4.19.0-6.fc40.x86_64 libtirpc-1.3.4-1.rc3.fc40.x86_64 libtool-ltdl-2.4.7-10.fc40.x86_64 libunistring-1.1-7.fc40.x86_64 libutempter-1.2.1-13.fc40.x86_64 libuuid-2.40-13.fc40.x86_64 libverto-0.3.2-8.fc40.x86_64 libxcrypt-4.4.36-5.fc40.x86_64 libxml2-2.12.6-1.fc40.x86_64 libzstd-1.5.6-1.fc40.x86_64 lua-libs-5.4.6-5.fc40.x86_64 lua-srpm-macros-1-13.fc40.noarch lz4-libs-1.9.4-6.fc40.x86_64 mpfr-4.2.1-3.fc40.x86_64 ncurses-base-6.4-12.20240127.fc40.noarch ncurses-libs-6.4-12.20240127.fc40.x86_64 ocaml-srpm-macros-9-3.fc40.noarch openblas-srpm-macros-2-16.fc40.noarch openldap-2.6.7-1.fc40.x86_64 openssl-libs-3.2.1-2.fc40.x86_64 p11-kit-0.25.3-4.fc40.x86_64 p11-kit-trust-0.25.3-4.fc40.x86_64 package-notes-srpm-macros-0.5-11.fc40.noarch pam-1.6.0-2.fc40.x86_64 pam-libs-1.6.0-2.fc40.x86_64 patch-2.7.6-24.fc40.x86_64 pcre2-10.42-2.fc40.2.x86_64 pcre2-syntax-10.42-2.fc40.2.noarch perl-srpm-macros-1-53.fc40.noarch pkgconf-2.1.0-1.fc40.x86_64 pkgconf-m4-2.1.0-1.fc40.noarch pkgconf-pkg-config-2.1.0-1.fc40.x86_64 popt-1.19-6.fc40.x86_64 publicsuffix-list-dafsa-20240107-3.fc40.noarch pyproject-srpm-macros-1.12.0-1.fc40.noarch python-srpm-macros-3.12-7.fc40.noarch qt5-srpm-macros-5.15.13-1.fc40.noarch qt6-srpm-macros-6.7.0-1.fc40.noarch readline-8.2-8.fc40.x86_64 redhat-rpm-config-286-1.fc40.noarch rpm-4.19.1.1-1.fc40.x86_64 rpm-build-4.19.1.1-1.fc40.x86_64 rpm-build-libs-4.19.1.1-1.fc40.x86_64 rpm-libs-4.19.1.1-1.fc40.x86_64 rpm-sequoia-1.6.0-2.fc40.x86_64 rust-srpm-macros-26.2-1.fc40.noarch sed-4.9-1.fc40.x86_64 setup-2.14.5-2.fc40.noarch shadow-utils-4.15.1-2.fc40.x86_64 sqlite-libs-3.45.1-2.fc40.x86_64 systemd-libs-255.4-1.fc40.x86_64 tar-1.35-3.fc40.x86_64 unzip-6.0-63.fc40.x86_64 util-linux-2.40-13.fc40.x86_64 util-linux-core-2.40-13.fc40.x86_64 which-2.21-41.fc40.x86_64 xxhash-libs-0.8.2-2.fc40.x86_64 xz-5.4.6-3.fc40.x86_64 xz-libs-5.4.6-3.fc40.x86_64 zig-srpm-macros-1-2.fc40.noarch zip-3.0-40.fc40.x86_64 zlib-ng-compat-2.1.6-2.fc40.x86_64 zstd-1.5.6-1.fc40.x86_64 Start: buildsrpm Start: rpmbuild -bs warning: source_date_epoch_from_changelog set but %changelog is missing Building target platforms: x86_64 Building for target x86_64 Wrote: /builddir/build/SRPMS/R-CRAN-RNewsflow-1.2.8-1.fc40.copr7359996.src.rpm RPM build warnings: source_date_epoch_from_changelog set but %changelog is missing Finish: rpmbuild -bs cp: preserving permissions for ‘/var/lib/copr-rpmbuild/results/chroot_scan/var/lib/mock/fedora-40-x86_64-1714185454.719422/root/var/log’: No such file or directory INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-40-x86_64-1714185454.719422/root/var/log/dnf5.log Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-jzb4dsna/R-CRAN-RNewsflow/R-CRAN-RNewsflow.spec) Config(child) 0 minutes 14 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/R-CRAN-RNewsflow-1.2.8-1.fc40.copr7359996.src.rpm) Config(fedora-40-x86_64) Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-40-x86_64-1714185454.719422/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management from host and used with --installroot: rpm-4.19.1.1-1.fc39.x86_64 rpm-sequoia-1.6.0-1.fc39.x86_64 python3-dnf-4.19.2-1.fc39.noarch python3-dnf-plugins-core-4.6.0-1.fc39.noarch yum-4.19.2-1.fc39.noarch dnf5-5.1.17-1.fc39.x86_64 dnf5-plugins-5.1.17-1.fc39.x86_64 Finish: chroot init Start: build phase for R-CRAN-RNewsflow-1.2.8-1.fc40.copr7359996.src.rpm Start: build setup for R-CRAN-RNewsflow-1.2.8-1.fc40.copr7359996.src.rpm warning: source_date_epoch_from_changelog set but %changelog is missing Building target platforms: x86_64 Building for target x86_64 Wrote: /builddir/build/SRPMS/R-CRAN-RNewsflow-1.2.8-1.fc40.copr7359996.src.rpm RPM build warnings: source_date_epoch_from_changelog set but %changelog is missing Updating and loading repositories: updates 100% | 159.1 KiB/s | 21.8 KiB | 00m00s fedora 100% | 254.8 KiB/s | 22.7 KiB | 00m00s Copr repository 100% | 24.8 KiB/s | 1.5 KiB | 00m00s Copr repository 100% | 46.3 MiB/s | 13.5 MiB | 00m00s Repositories loaded. Package Arch Version Repository Size Installing: R-CRAN-Matrix x86_64 1.6.5-1.fc40.copr7355271 copr_base 7.2 MiB R-CRAN-Rcpp x86_64 1.0.12-1.fc40.copr7349917 copr_base 8.3 MiB R-CRAN-RcppEigen x86_64 0.3.4.0.0-1.fc40.copr7353593 copr_base 9.0 MiB R-CRAN-RcppProgress noarch 0.4.2-3.fc40.copr7350251 copr_base 49.9 KiB R-CRAN-data.table x86_64 1.15.4-1.fc40.copr7349979 copr_base 3.8 MiB R-CRAN-igraph x86_64 2.0.3-1.fc40.copr7357926 copr_base 10.0 MiB R-CRAN-quanteda x86_64 4.0.2-1.fc40.copr7356666 copr_base 3.1 MiB R-CRAN-scales noarch 1.3.0-1.fc40.copr7356067 copr_base 1.1 MiB R-CRAN-stringi x86_64 1.8.3-1.fc40.copr7349950 copr_base 2.0 MiB R-CRAN-wordcloud x86_64 2.6-3.fc40.copr7353780 copr_base 159.9 KiB R-core x86_64 4.4.0-1.fc40~bootstrap copr_base 100.7 MiB R-devel x86_64 4.4.0-1.fc40~bootstrap copr_base 0.0 B Installing dependencies: R-CRAN-ISOcodes noarch 2024.02.12-1.fc40.copr7350320 copr_base 339.4 KiB R-CRAN-R6 noarch 2.5.1-1.fc40.copr7349938 copr_base 115.9 KiB R-CRAN-RColorBrewer noarch 1.1.3-1.fc40.copr7349948 copr_base 63.6 KiB R-CRAN-SnowballC x86_64 0.7.1-1.fc40.copr7350314 copr_base 572.7 KiB R-CRAN-cli x86_64 3.6.2-1.fc40.copr7349961 copr_base 2.4 MiB R-CRAN-colorspace x86_64 2.1.0-1.fc40.copr7349953 copr_base 4.0 MiB R-CRAN-farver x86_64 2.1.1-1.fc40.copr7349997 copr_base 2.0 MiB R-CRAN-fastmatch x86_64 1.1.4-1.fc40.copr7350100 copr_base 72.9 KiB R-CRAN-glue x86_64 1.7.0-1.fc40.copr7349919 copr_base 261.2 KiB R-CRAN-jsonlite x86_64 1.8.8-1.fc40.copr7349934 copr_base 2.3 MiB R-CRAN-labeling noarch 0.4.3-1.fc40.copr7349947 copr_base 92.7 KiB R-CRAN-lattice x86_64 0.22.6-1.fc40.copr7352639 copr_base 2.0 MiB R-CRAN-lifecycle noarch 1.0.4-1.fc40.copr7354340 copr_base 282.7 KiB R-CRAN-magrittr x86_64 2.0.3-1.fc40.copr7349936 copr_base 417.3 KiB R-CRAN-munsell noarch 0.5.1-1.fc40.copr7353599 copr_base 379.0 KiB R-CRAN-pkgconfig noarch 2.0.3-3.fc40.copr7349937 copr_base 34.0 KiB R-CRAN-rlang x86_64 1.1.3-1.fc40.copr7349924 copr_base 2.6 MiB R-CRAN-stopwords noarch 2.3-1.fc40.copr7353834 copr_base 258.8 KiB R-CRAN-vctrs x86_64 0.6.5-1.fc40.copr7356070 copr_base 2.3 MiB R-CRAN-viridisLite noarch 0.4.2-1.fc40.copr7349928 copr_base 1.3 MiB R-CRAN-xml2 x86_64 1.3.6-1.fc40.copr7353644 copr_base 509.0 KiB R-CRAN-yaml x86_64 2.3.8-1.fc40.copr7349946 copr_base 274.9 KiB R-core-devel x86_64 4.4.0-1.fc40~bootstrap copr_base 394.1 KiB R-java x86_64 4.4.0-1.fc40~bootstrap copr_base 0.0 B R-java-devel x86_64 4.4.0-1.fc40~bootstrap copr_base 0.0 B R-littler x86_64 0.3.19-3.fc40 fedora 189.7 KiB R-rpm-macros noarch 1.2.1-9.fc40 fedora 5.6 KiB abattis-cantarell-vf-fonts noarch 0.301-12.fc40 fedora 192.7 KiB alsa-lib x86_64 1.2.11-2.fc40 fedora 1.4 MiB annobin-docs noarch 12.46-1.fc40 updates 95.7 KiB annobin-plugin-gcc x86_64 12.46-1.fc40 updates 969.9 KiB avahi-libs x86_64 0.8-26.fc40 fedora 166.3 KiB brotli x86_64 1.1.0-3.fc40 fedora 31.8 KiB brotli-devel x86_64 1.1.0-3.fc40 fedora 65.6 KiB bzip2-devel x86_64 1.0.8-18.fc40 fedora 309.8 KiB cairo x86_64 1.18.0-3.fc40 fedora 1.7 MiB cmake-filesystem x86_64 3.28.2-1.fc40 fedora 0.0 B copy-jdk-configs noarch 4.1-5.fc40 fedora 20.3 KiB cpp x86_64 14.0.1-0.15.fc40 fedora 34.9 MiB crypto-policies-scripts noarch 20240201-2.git9f501f3.fc40 fedora 313.8 KiB cups-libs x86_64 1:2.4.7-13.fc40 updates 618.9 KiB dbus-libs x86_64 1:1.14.10-3.fc40 fedora 368.9 KiB default-fonts-core-sans noarch 4.0-12.fc40 fedora 11.9 KiB desktop-file-utils x86_64 0.26-12.fc40 fedora 226.0 KiB emacs-filesystem noarch 1:29.3-5.fc40 updates 0.0 B expat x86_64 2.6.2-1.fc40 updates 280.8 KiB flexiblas x86_64 3.4.2-1.fc40 fedora 46.9 KiB flexiblas-devel x86_64 3.4.2-1.fc40 fedora 4.7 MiB flexiblas-netlib x86_64 3.4.2-1.fc40 fedora 10.4 MiB flexiblas-netlib64 x86_64 3.4.2-1.fc40 fedora 10.5 MiB flexiblas-openblas-openmp x86_64 3.4.2-1.fc40 fedora 39.3 KiB flexiblas-openblas-openmp64 x86_64 3.4.2-1.fc40 fedora 39.3 KiB fontconfig x86_64 2.15.0-4.fc40 fedora 767.3 KiB fontconfig-devel x86_64 2.15.0-4.fc40 fedora 117.2 KiB fonts-filesystem noarch 1:2.0.5-14.fc40 fedora 0.0 B freetype x86_64 2.13.2-5.fc40 fedora 842.6 KiB freetype-devel x86_64 2.13.2-5.fc40 fedora 7.8 MiB fribidi x86_64 1.0.13-4.fc40 fedora 365.3 KiB gc x86_64 8.2.2-6.fc40 fedora 258.7 KiB gcc x86_64 14.0.1-0.15.fc40 fedora 104.0 MiB gcc-c++ x86_64 14.0.1-0.15.fc40 fedora 38.1 MiB gcc-gfortran x86_64 14.0.1-0.15.fc40 fedora 37.2 MiB gcc-plugin-annobin x86_64 14.0.1-0.15.fc40 fedora 57.1 KiB gettext x86_64 0.22.5-2.fc40 fedora 5.2 MiB gettext-envsubst x86_64 0.22.5-2.fc40 fedora 74.9 KiB gettext-libs x86_64 0.22.5-2.fc40 fedora 1.7 MiB gettext-runtime x86_64 0.22.5-2.fc40 fedora 481.3 KiB glib2 x86_64 2.80.0-1.fc40 fedora 14.4 MiB glib2-devel x86_64 2.80.0-1.fc40 fedora 15.4 MiB glibc-devel x86_64 2.39-8.fc40 updates 36.3 KiB glibc-headers-x86 noarch 2.39-8.fc40 updates 2.2 MiB glpk x86_64 5.0-11.fc40 fedora 870.7 KiB gnutls x86_64 3.8.5-1.fc40 updates 3.2 MiB google-noto-fonts-common noarch 20240301-2.fc40 fedora 17.5 KiB google-noto-sans-vf-fonts noarch 20240301-2.fc40 fedora 1.2 MiB graphite2 x86_64 1.3.14-15.fc40 fedora 192.0 KiB graphite2-devel x86_64 1.3.14-15.fc40 fedora 49.1 KiB guile30 x86_64 3.0.7-12.fc40 fedora 51.5 MiB harfbuzz x86_64 8.3.0-5.fc40 fedora 2.6 MiB harfbuzz-devel x86_64 8.3.0-5.fc40 fedora 5.1 MiB harfbuzz-icu x86_64 8.3.0-5.fc40 fedora 15.5 KiB java-21-openjdk x86_64 1:21.0.2.0.13-3.fc40 fedora 1.1 MiB java-21-openjdk-devel x86_64 1:21.0.2.0.13-3.fc40 fedora 11.2 MiB java-21-openjdk-headless x86_64 1:21.0.2.0.13-3.fc40 fedora 204.9 MiB javapackages-filesystem noarch 6.2.0-9.fc40 fedora 1.9 KiB jbigkit-libs x86_64 2.1-29.fc40 fedora 117.6 KiB kernel-headers x86_64 6.8.3-300.fc40 fedora 6.2 MiB libICE x86_64 1.1.1-3.fc40 fedora 181.2 KiB libRmath x86_64 4.4.0-1.fc40~bootstrap copr_base 242.8 KiB libRmath-devel x86_64 4.4.0-1.fc40~bootstrap copr_base 17.4 KiB libSM x86_64 1.2.4-3.fc40 fedora 97.3 KiB libX11 x86_64 1.8.9-1.fc40 updates 1.3 MiB libX11-common noarch 1.8.9-1.fc40 updates 1.1 MiB libX11-devel x86_64 1.8.9-1.fc40 updates 1.0 MiB libX11-xcb x86_64 1.8.9-1.fc40 updates 15.0 KiB libXau x86_64 1.0.11-6.fc40 fedora 66.9 KiB libXau-devel x86_64 1.0.11-6.fc40 fedora 6.4 KiB libXcomposite x86_64 0.4.6-3.fc40 fedora 44.5 KiB libXext x86_64 1.3.6-1.fc40 fedora 90.1 KiB libXft x86_64 2.3.8-6.fc40 fedora 164.5 KiB libXft-devel x86_64 2.3.8-6.fc40 fedora 31.7 KiB libXi x86_64 1.8.1-5.fc40 fedora 80.7 KiB libXmu x86_64 1.2.0-1.fc40 updates 186.4 KiB libXrender x86_64 0.9.11-6.fc40 fedora 50.1 KiB libXrender-devel x86_64 0.9.11-6.fc40 fedora 50.1 KiB libXt x86_64 1.3.0-3.fc40 fedora 425.9 KiB libXtst x86_64 1.2.4-6.fc40 fedora 33.6 KiB libb2 x86_64 0.98.1-11.fc40 fedora 42.2 KiB libblkid-devel x86_64 2.40-13.fc40 updates 44.9 KiB libdatrie x86_64 0.2.13-9.fc40 fedora 57.9 KiB libffi-devel x86_64 3.4.4-7.fc40 fedora 33.3 KiB libfontenc x86_64 1.1.7-3.fc40 fedora 65.0 KiB libgfortran x86_64 14.0.1-0.15.fc40 fedora 2.9 MiB libicu x86_64 74.2-1.fc40 fedora 34.9 MiB libicu-devel x86_64 74.2-1.fc40 fedora 5.6 MiB libjpeg-turbo x86_64 3.0.2-1.fc40 fedora 776.9 KiB liblerc x86_64 4.0.0-6.fc40 fedora 603.5 KiB libmount-devel x86_64 2.40-13.fc40 updates 63.5 KiB libmpc x86_64 1.3.1-5.fc40 fedora 164.7 KiB libpng x86_64 2:1.6.40-3.fc40 fedora 241.8 KiB libpng-devel x86_64 2:1.6.40-3.fc40 fedora 881.5 KiB libquadmath x86_64 14.0.1-0.15.fc40 fedora 325.9 KiB libquadmath-devel x86_64 14.0.1-0.15.fc40 fedora 21.8 KiB libselinux-devel x86_64 3.6-4.fc40 fedora 126.1 KiB libsepol-devel x86_64 3.6-3.fc40 fedora 120.2 KiB libstdc++-devel x86_64 14.0.1-0.15.fc40 fedora 15.4 MiB libthai x86_64 0.1.29-8.fc40 fedora 783.5 KiB libtiff x86_64 4.6.0-2.fc40 fedora 1.1 MiB libtirpc-devel x86_64 1.3.4-1.rc3.fc40 fedora 251.6 KiB libwebp x86_64 1.3.2-5.fc40 fedora 793.6 KiB libxcb x86_64 1.16-4.fc40 fedora 1.1 MiB libxcb-devel x86_64 1.16-4.fc40 fedora 2.7 MiB libxcrypt-devel x86_64 4.4.36-5.fc40 fedora 30.3 KiB libxml2-devel x86_64 2.12.6-1.fc40 updates 3.4 MiB lksctp-tools x86_64 1.0.19-6.fc40 fedora 269.6 KiB lua x86_64 5.4.6-5.fc40 fedora 597.8 KiB lua-posix x86_64 36.2.1-6.fc40 fedora 599.7 KiB make x86_64 1:4.4.1-6.fc40 fedora 1.8 MiB mkfontscale x86_64 1.2.2-6.fc40 fedora 49.2 KiB mpdecimal x86_64 2.5.1-9.fc40 fedora 200.9 KiB nettle x86_64 3.9.1-6.fc40 fedora 790.1 KiB nspr x86_64 4.35.0-22.fc40 updates 312.6 KiB nss x86_64 3.99.0-1.fc40 updates 1.9 MiB nss-softokn x86_64 3.99.0-1.fc40 updates 1.9 MiB nss-softokn-freebl x86_64 3.99.0-1.fc40 updates 896.6 KiB nss-sysinit x86_64 3.99.0-1.fc40 updates 18.2 KiB nss-util x86_64 3.99.0-1.fc40 updates 226.1 KiB openblas x86_64 0.3.26-4.fc40 fedora 96.0 KiB openblas-openmp x86_64 0.3.26-4.fc40 fedora 38.9 MiB openblas-openmp64 x86_64 0.3.26-4.fc40 fedora 39.1 MiB pango x86_64 1.52.2-1.fc40 updates 995.9 KiB pcre2-devel x86_64 10.42-2.fc40.2 fedora 1.9 MiB pcre2-utf16 x86_64 10.42-2.fc40.2 fedora 570.2 KiB pcre2-utf32 x86_64 10.42-2.fc40.2 fedora 542.1 KiB pixman x86_64 0.43.0-3.fc40 fedora 714.1 KiB python-pip-wheel noarch 23.3.2-1.fc40 fedora 1.5 MiB python3 x86_64 3.12.2-2.fc40 fedora 31.9 KiB python3-libs x86_64 3.12.2-2.fc40 fedora 41.0 MiB python3-packaging noarch 23.2-4.fc40 fedora 421.1 KiB suitesparse x86_64 7.6.0-1.fc40 fedora 137.1 MiB sysprof-capture-devel x86_64 46.0-1.fc40 fedora 252.8 KiB tcl x86_64 1:8.6.13-2.fc40 fedora 4.2 MiB tcl-devel x86_64 1:8.6.13-2.fc40 fedora 809.0 KiB tk x86_64 1:8.6.13-3.fc40 fedora 3.6 MiB tk-devel x86_64 1:8.6.13-3.fc40 fedora 983.9 KiB tre x86_64 0.8.0-43.20140228gitc2f5d13.fc40 fedora 75.9 KiB tre-common noarch 0.8.0-43.20140228gitc2f5d13.fc40 fedora 81.0 KiB tre-devel x86_64 0.8.0-43.20140228gitc2f5d13.fc40 fedora 10.7 KiB ttmkfdir x86_64 3.0.9-70.fc40 fedora 122.7 KiB tzdata noarch 2024a-5.fc40 updates 1.6 MiB tzdata-java noarch 2024a-5.fc40 updates 101.7 KiB xdg-utils noarch 1.2.1-1.fc40 fedora 346.3 KiB xml-common noarch 0.6.3-63.fc40 fedora 78.4 KiB xorg-x11-fonts-Type1 noarch 7.5-38.fc40 fedora 863.3 KiB xorg-x11-proto-devel noarch 2024.1-1.fc40 updates 1.7 MiB xz-devel x86_64 1:5.4.6-3.fc40 fedora 255.8 KiB zlib-ng-compat-devel x86_64 2.1.6-2.fc40 fedora 103.4 KiB Transaction Summary: Installing: 189 packages Total size of inbound packages is 330 MiB. 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R-CRAN-RcppProgres 100% | 10.0 MiB/s | 61.4 KiB | 00m00s [189/191] Installing R-CRAN-data.table- 100% | 114.1 MiB/s | 3.9 MiB | 00m00s [190/191] Installing gcc-plugin-annobin 100% | 2.2 MiB/s | 58.6 KiB | 00m00s >>> Running trigger-install scriptlet: redhat-rpm-config-0:286-1.fc40.noarch >>> Stop trigger-install scriptlet: redhat-rpm-config-0:286-1.fc40.noarch [191/191] Installing annobin-plugin-gcc 100% | 1.1 MiB/s | 971.4 KiB | 00m01s >>> Running trigger-install scriptlet: redhat-rpm-config-0:286-1.fc40.noarch >>> Stop trigger-install scriptlet: redhat-rpm-config-0:286-1.fc40.noarch >>> Running post-transaction scriptlet: crypto-policies-scripts-0:20240201-2.git >>> Stop post-transaction scriptlet: crypto-policies-scripts-0:20240201-2.git9f5 >>> Running post-transaction scriptlet: nss-0:3.99.0-1.fc40.x86_64 >>> Stop post-transaction scriptlet: nss-0:3.99.0-1.fc40.x86_64 >>> Running post-transaction scriptlet: copy-jdk-configs-0:4.1-5.fc40.noarch >>> Stop post-transaction scriptlet: 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glib2-0:2.80.0-1.fc40.x86_64 >>> Stop trigger-install scriptlet: glib2-0:2.80.0-1.fc40.x86_64 >>> Running trigger-install scriptlet: glib2-0:2.80.0-1.fc40.x86_64 >>> Stop trigger-install scriptlet: glib2-0:2.80.0-1.fc40.x86_64 >>> Running trigger-install scriptlet: desktop-file-utils-0:0.26-12.fc40.x86_64 >>> Stop trigger-install scriptlet: desktop-file-utils-0:0.26-12.fc40.x86_64 >>> Running trigger-install scriptlet: fontconfig-0:2.15.0-4.fc40.x86_64 >>> Stop trigger-install scriptlet: fontconfig-0:2.15.0-4.fc40.x86_64 Warning: skipped PGP checks for 39 package(s). Finish: build setup for R-CRAN-RNewsflow-1.2.8-1.fc40.copr7359996.src.rpm Start: rpmbuild R-CRAN-RNewsflow-1.2.8-1.fc40.copr7359996.src.rpm warning: source_date_epoch_from_changelog set but %changelog is missing Building target platforms: x86_64 Building for target x86_64 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.j99KBB + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf RNewsflow + /usr/bin/mkdir -p RNewsflow + cd RNewsflow + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/RNewsflow_1.2.8.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + rm -rf /builddir/build/BUILD/RNewsflow-SPECPARTS + /usr/bin/mkdir -p /builddir/build/BUILD/RNewsflow-SPECPARTS + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + find -type f -executable -exec grep -Iq . '{}' ';' -exec sed -i -e '$a\' '{}' ';' + '[' -d RNewsflow/src ']' + find RNewsflow/src -type f -exec sed -i s@/usr/bin/strip@/usr/bin/true@g '{}' ';' + '[' -d RNewsflow/src ']' + find 'RNewsflow/src/Make*' -type f -exec sed -i s@-g0@@g '{}' ';' find: ‘RNewsflow/src/Make*’: No such file or directory + true + find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' '{}' ';' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.WOXQCb + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd RNewsflow + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.OfMlhh + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/R-CRAN-RNewsflow-1.2.8-1.fc40.copr7359996.x86_64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/R-CRAN-RNewsflow-1.2.8-1.fc40.copr7359996.x86_64 ++ dirname /builddir/build/BUILDROOT/R-CRAN-RNewsflow-1.2.8-1.fc40.copr7359996.x86_64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/R-CRAN-RNewsflow-1.2.8-1.fc40.copr7359996.x86_64 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd RNewsflow + mkdir -p /builddir/build/BUILDROOT/R-CRAN-RNewsflow-1.2.8-1.fc40.copr7359996.x86_64/usr/local/lib/R/library + /usr/bin/R CMD INSTALL -l /builddir/build/BUILDROOT/R-CRAN-RNewsflow-1.2.8-1.fc40.copr7359996.x86_64/usr/local/lib/R/library RNewsflow * installing *source* package ‘RNewsflow’ ... ** package ‘RNewsflow’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++ (GCC) 14.0.1 20240411 (Red Hat 14.0.1-0)’ g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppEigen/include' -I'/usr/local/lib/R/library/RcppProgress/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c RcppExports.cpp -o RcppExports.o In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:205, from /usr/local/lib/R/library/RcppEigen/include/Eigen/Dense:1, from /usr/local/lib/R/library/RcppEigen/include/RcppEigenForward.h:28, from /usr/local/lib/R/library/RcppEigen/include/RcppEigen.h:25, from RNewsflow_types.h:1, from RcppExports.cpp:4: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes] 49 | template<> struct is_arithmetic<__m128> { enum { value = true }; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes] 51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 222 | template<> struct unpacket_traits { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 228 | template<> struct unpacket_traits { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 1124 | ptranspose(PacketBlock& kernel) { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 1129 | ptranspose(PacketBlock& kernel) { | ^ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:174: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:165: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: 266 | Alignment = internal::traits::Alignment, /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: 24 | ResAlignment = traits >::Alignment /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: | ^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:271: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 302 | class DenseCoeffsBase : public DenseCoeffsBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 555 | class DenseCoeffsBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 41 | template class DenseBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 48 | template class MatrixBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 98 | class PlainObjectBase : public internal::dense_xpr_base::type /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 178 | class Matrix /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 273 | class Quaternion : public QuaternionBase > /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 27 | { /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 266 | Alignment = internal::traits::Alignment, /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 98 | ResAlignment = traits >::Alignment /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 302 | class DenseCoeffsBase : public DenseCoeffsBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 555 | class DenseCoeffsBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 41 | template class DenseBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 48 | template class MatrixBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 98 | class PlainObjectBase : public internal::dense_xpr_base::type /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 178 | class Matrix /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 273 | class Quaternion : public QuaternionBase > /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 102 | { /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/SparseCore:37, from /usr/local/lib/R/library/RcppEigen/include/Eigen/Sparse:26, from /usr/local/lib/R/library/RcppEigen/include/RcppEigenForward.h:29: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 36 | class SparseCompressedBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ^~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from ‘class Eigen::SparseMatrix’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 96 | class SparseMatrix /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 61 | typedef Triplet T; /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:336:80: required from ‘struct Eigen::internal::evaluator > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: 336 | typedef typename DenseCoeffsBase::CoeffReturnType CoeffReturnType; /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1505:8: required from ‘struct Eigen::internal::evaluator >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: 1505 | struct evaluator > /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseAssign.h:77:20: required from ‘void Eigen::internal::assign_sparse_to_sparse(DstXprType&, const SrcXprType&) [with DstXprType = Eigen::SparseMatrix; SrcXprType = Eigen::SparseMatrix]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: 77 | SrcEvaluatorType srcEvaluator(src); /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseAssign.h:132:28: required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::SparseMatrix; SrcXprType = Eigen::SparseMatrix; Functor = Eigen::internal::assign_op; typename DstXprType::Scalar = double; typename SrcXprType::Scalar = double]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: 132 | assign_sparse_to_sparse(dst.derived(), src.derived()); /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::SparseMatrix; Src = Eigen::SparseMatrix; Func = assign_op]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: 890 | Assignment::run(actualDst, src, func); /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:917:27: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:713:13: required from ‘Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::SparseMatrix(const Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>&) [with _Scalar = double; int _Options = 0; _StorageIndex = int]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: 713 | *this = other.derived(); /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: | ~~~~~~^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/RcppEigenWrap.h:387:24: required from ‘Eigen::SparseMatrix Rcpp::traits::Exporter >::get() [with T = double]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: 387 | return ans; /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: | ^~~ /usr/local/lib/R/library/Rcpp/include/Rcpp/as.h:89:32: required from ‘T Rcpp::internal::as(SEXP, Rcpp::traits::r_type_generic_tag) [with T = Eigen::SparseMatrix; SEXP = SEXPREC*]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: 89 | return exporter.get(); /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: | ~~~~~~~~~~~~^~ /usr/local/lib/R/library/Rcpp/include/Rcpp/as.h:152:31: required from ‘T Rcpp::as(SEXP) [with T = Eigen::SparseMatrix; SEXP = SEXPREC*]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: 152 | return internal::as(x, typename traits::r_type_traits::r_category()); /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/Rcpp/include/Rcpp/InputParameter.h:46:54: required from ‘Rcpp::ReferenceInputParameter::ReferenceInputParameter(SEXP) [with T = Eigen::SparseMatrix; SEXP = SEXPREC*]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: 46 | ReferenceInputParameter(SEXP x_) : obj( as(x_) ){} /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: | ~~~~~^~~~ RcppExports.cpp:21:58: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: 21 | Rcpp::traits::input_parameter< SpMat& >::type m(mSEXP); /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppEigen/include' -I'/usr/local/lib/R/library/RcppProgress/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c combine_dtm_terms.cpp -o combine_dtm_terms.o In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:205, from /usr/local/lib/R/library/RcppEigen/include/Eigen/Dense:1, from /usr/local/lib/R/library/RcppEigen/include/RcppEigenForward.h:28, from /usr/local/lib/R/library/RcppEigen/include/RcppEigen.h:25, from combine_dtm_terms.cpp:1: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes] 49 | template<> struct is_arithmetic<__m128> { enum { value = true }; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes] 51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 222 | template<> struct unpacket_traits { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 228 | template<> struct unpacket_traits { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 1124 | ptranspose(PacketBlock& kernel) { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 1129 | ptranspose(PacketBlock& kernel) { | ^ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:174: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:165: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: 266 | Alignment = internal::traits::Alignment, /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: 24 | ResAlignment = traits >::Alignment /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: | ^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:271: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 302 | class DenseCoeffsBase : public DenseCoeffsBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 555 | class DenseCoeffsBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 41 | template class DenseBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 48 | template class MatrixBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 98 | class PlainObjectBase : public internal::dense_xpr_base::type /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 178 | class Matrix /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 273 | class Quaternion : public QuaternionBase > /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 27 | { /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 266 | Alignment = internal::traits::Alignment, /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 98 | ResAlignment = traits >::Alignment /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 302 | class DenseCoeffsBase : public DenseCoeffsBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 555 | class DenseCoeffsBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 41 | template class DenseBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 48 | template class MatrixBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 98 | class PlainObjectBase : public internal::dense_xpr_base::type /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 178 | class Matrix /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 273 | class Quaternion : public QuaternionBase > /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 102 | { /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/SparseCore:37, from /usr/local/lib/R/library/RcppEigen/include/Eigen/Sparse:26, from /usr/local/lib/R/library/RcppEigen/include/RcppEigenForward.h:29: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 36 | class SparseCompressedBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ^~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from ‘class Eigen::SparseMatrix’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 96 | class SparseMatrix /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 61 | typedef Triplet T; /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ combine_dtm_terms.cpp: In function ‘Rcpp::List term_union_cpp(SpMat&, SpMat&, std::vector >, std::vector, bool, std::string)’: combine_dtm_terms.cpp:23:20: warning: comparison of integer expressions of different signedness: ‘std::vector >::size_type’ {aka ‘long unsigned int’} and ‘Eigen::Index’ {aka ‘long int’} [-Wsign-compare] 23 | if (terms.size() != m.cols()) stop("number of terms not identical to number of columns in m"); | ~~~~~~~~~~~~~^~~~~~~~~~~ combine_dtm_terms.cpp: In function ‘Rcpp::List term_intersect_cpp(SpMat&, SpMat&, std::vector >, std::vector, bool, std::string)’: combine_dtm_terms.cpp:87:20: warning: comparison of integer expressions of different signedness: ‘std::vector >::size_type’ {aka ‘long unsigned int’} and ‘Eigen::Index’ {aka ‘long int’} [-Wsign-compare] 87 | if (terms.size() != m.cols()) stop("number of terms not identical to number of columns in m"); | ~~~~~~~~~~~~~^~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase >’ combine_dtm_terms.cpp:87:20: warning: 36 | class SparseCompressedBase combine_dtm_terms.cpp:87:20: warning: | ^~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from ‘class Eigen::SparseMatrix’ combine_dtm_terms.cpp:87:20: warning: 96 | class SparseMatrix combine_dtm_terms.cpp:87:20: warning: | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1040:66: required from ‘void Eigen::internal::set_from_triplets(const InputIterator&, const InputIterator&, SparseMatrixType&, DupFunctor) [with InputIterator = __gnu_cxx::__normal_iterator*, std::vector > >; SparseMatrixType = Eigen::SparseMatrix; DupFunctor = scalar_sum_op]’ combine_dtm_terms.cpp:87:20: warning: 1040 | SparseMatrix trMat(mat.rows(),mat.cols()); combine_dtm_terms.cpp:87:20: warning: | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1110:92: required from ‘void Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::setFromTriplets(const InputIterators&, const InputIterators&) [with InputIterators = __gnu_cxx::__normal_iterator*, std::vector > >; _Scalar = double; int _Options = 0; _StorageIndex = int]’ combine_dtm_terms.cpp:87:20: warning: 1110 | internal::set_from_triplets >(begin, end, *this, internal::scalar_sum_op()); combine_dtm_terms.cpp:87:20: warning: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ combine_dtm_terms.cpp:74:23: required from here combine_dtm_terms.cpp:87:20: warning: 74 | newm.setFromTriplets(tl.begin(), tl.end()); combine_dtm_terms.cpp:87:20: warning: | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:336:80: required from ‘struct Eigen::internal::evaluator > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: 336 | typedef typename DenseCoeffsBase::CoeffReturnType CoeffReturnType; /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1505:8: required from ‘struct Eigen::internal::evaluator >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: 1505 | struct evaluator > /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1181:93: required from ‘Eigen::SparseMatrix<_Scalar, _Options, _StorageIndex>& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::operator=(const Eigen::SparseMatrixBase&) [with OtherDerived = Eigen::SparseMatrix; _Scalar = double; int _Options = 0; _StorageIndex = int]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: 1181 | const bool needToTranspose = (Flags & RowMajorBit) != (internal::evaluator::Flags & RowMajorBit); /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1063:7: required from ‘void Eigen::internal::set_from_triplets(const InputIterator&, const InputIterator&, SparseMatrixType&, DupFunctor) [with InputIterator = __gnu_cxx::__normal_iterator*, std::vector > >; SparseMatrixType = Eigen::SparseMatrix; DupFunctor = scalar_sum_op]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: 1063 | mat = trMat; /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: | ~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1110:92: required from ‘void Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::setFromTriplets(const InputIterators&, const InputIterators&) [with InputIterators = __gnu_cxx::__normal_iterator*, std::vector > >; _Scalar = double; int _Options = 0; _StorageIndex = int]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: 1110 | internal::set_from_triplets >(begin, end, *this, internal::scalar_sum_op()); /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ combine_dtm_terms.cpp:74:23: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: 74 | newm.setFromTriplets(tl.begin(), tl.end()); /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:336:80: required from ‘struct Eigen::internal::evaluator > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 336 | typedef typename DenseCoeffsBase::CoeffReturnType CoeffReturnType; /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1505:8: required from ‘struct Eigen::internal::evaluator >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 1505 | struct evaluator > /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseAssign.h:79:45: required from ‘void Eigen::internal::assign_sparse_to_sparse(DstXprType&, const SrcXprType&) [with DstXprType = Eigen::SparseMatrix; SrcXprType = Eigen::SparseMatrix]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 79 | const bool transpose = (DstEvaluatorType::Flags & RowMajorBit) != (SrcEvaluatorType::Flags & RowMajorBit); /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseAssign.h:132:28: required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::SparseMatrix; SrcXprType = Eigen::SparseMatrix; Functor = Eigen::internal::assign_op; typename DstXprType::Scalar = double; typename SrcXprType::Scalar = double]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 132 | assign_sparse_to_sparse(dst.derived(), src.derived()); /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseAssign.h:38:16: required from ‘Derived& Eigen::SparseMatrixBase::operator=(const Eigen::SparseMatrixBase&) [with OtherDerived = Eigen::SparseMatrix; Derived = Eigen::SparseMatrix]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 37 | internal::Assignment > /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 38 | ::run(derived(), other.derived(), internal::assign_op()); /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1239:27: required from ‘Eigen::SparseMatrix<_Scalar, _Options, _StorageIndex>& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::operator=(const Eigen::SparseMatrixBase&) [with OtherDerived = Eigen::SparseMatrix; _Scalar = double; int _Options = 0; _StorageIndex = int]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 1239 | return Base::operator=(other.derived()); /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1063:7: required from ‘void Eigen::internal::set_from_triplets(const InputIterator&, const InputIterator&, SparseMatrixType&, DupFunctor) [with InputIterator = __gnu_cxx::__normal_iterator*, std::vector > >; SparseMatrixType = Eigen::SparseMatrix; DupFunctor = scalar_sum_op]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 1063 | mat = trMat; /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1110:92: required from ‘void Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::setFromTriplets(const InputIterators&, const InputIterators&) [with InputIterators = __gnu_cxx::__normal_iterator*, std::vector > >; _Scalar = double; int _Options = 0; _StorageIndex = int]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 1110 | internal::set_from_triplets >(begin, end, *this, internal::scalar_sum_op()); /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ combine_dtm_terms.cpp:74:23: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 74 | newm.setFromTriplets(tl.begin(), tl.end()); /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppEigen/include' -I'/usr/local/lib/R/library/RcppProgress/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c crossprod.cpp -o crossprod.o In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:205, from /usr/local/lib/R/library/RcppEigen/include/Eigen/Dense:1, from /usr/local/lib/R/library/RcppEigen/include/RcppEigenForward.h:28, from /usr/local/lib/R/library/RcppEigen/include/RcppEigen.h:25, from crossprod.cpp:1: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes] 49 | template<> struct is_arithmetic<__m128> { enum { value = true }; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes] 51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 222 | template<> struct unpacket_traits { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 228 | template<> struct unpacket_traits { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 1124 | ptranspose(PacketBlock& kernel) { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 1129 | ptranspose(PacketBlock& kernel) { | ^ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:174: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:165: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: 266 | Alignment = internal::traits::Alignment, /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: 24 | ResAlignment = traits >::Alignment /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: | ^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:271: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 302 | class DenseCoeffsBase : public DenseCoeffsBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 555 | class DenseCoeffsBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 41 | template class DenseBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 48 | template class MatrixBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 98 | class PlainObjectBase : public internal::dense_xpr_base::type /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 178 | class Matrix /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 273 | class Quaternion : public QuaternionBase > /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 27 | { /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 266 | Alignment = internal::traits::Alignment, /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 98 | ResAlignment = traits >::Alignment /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 302 | class DenseCoeffsBase : public DenseCoeffsBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 555 | class DenseCoeffsBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 41 | template class DenseBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 48 | template class MatrixBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 98 | class PlainObjectBase : public internal::dense_xpr_base::type /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 178 | class Matrix /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 273 | class Quaternion : public QuaternionBase > /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 102 | { /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/SparseCore:37, from /usr/local/lib/R/library/RcppEigen/include/Eigen/Sparse:26, from /usr/local/lib/R/library/RcppEigen/include/RcppEigenForward.h:29: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 36 | class SparseCompressedBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ^~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from ‘class Eigen::SparseMatrix’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 96 | class SparseMatrix /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 61 | typedef Triplet T; /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ crossprod.cpp: In function ‘void fill_triples(Triplet&, std::vector&, const Index&, const Index&, int, int, bool, Rcpp::NumericVector, bool, Rcpp::NumericVector, int)’: crossprod.cpp:25:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 25 | if (top_n > 0 && top_n < res.size()) { | ~~~~~~^~~~~~~~~~~~ crossprod.cpp:36:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 36 | for (int res_i = 0; res_i < res.size(); res_i++) { | ~~~~~~^~~~~~~~~~~~ crossprod.cpp: In function ‘void fill_pair_information(std::vector&, std::vector&, int, int, Index&, Index&, SpMat&, bool, bool, int, int)’: crossprod.cpp:55:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 55 | for (int j = 0; j < use_pair.size(); j++) { | ~~^~~~~~~~~~~~~~~~~ crossprod.cpp: In function ‘void fill_row_attributes(int, bool, bool, bool, Index&, Index&, int, std::vector, std::vector, std::vector, Rcpp::NumericVector&, Rcpp::NumericVector&, Rcpp::NumericVector&, Rcpp::NumericVector&, Rcpp::NumericVector&, Rcpp::NumericVector&, Rcpp::NumericVector&, Rcpp::NumericVector&, Rcpp::NumericVector&)’: crossprod.cpp:80:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 80 | for (int res_i = 0; res_i < res.size(); res_i++) { | ~~~~~~^~~~~~~~~~~~ crossprod.cpp:87:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 87 | for (int pair_i = 0; pair_i < use_pair.size(); pair_i++) { | ~~~~~~~^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase, -1, -1, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseBlock.h:333:7: required from ‘class Eigen::BlockImpl, -1, -1, false, Eigen::Sparse>’ crossprod.cpp:87:33: warning: 333 | class BlockImpl crossprod.cpp:87:33: warning: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block, -1, -1, false>’ crossprod.cpp:87:33: warning: 103 | template class Block crossprod.cpp:87:33: warning: | ^~~~~ crossprod.cpp:186:31: required from here crossprod.cpp:87:33: warning: 186 | m2_batch = m2.middleRows(batch_indices.first, batch_indices.second - batch_indices.first); crossprod.cpp:87:33: warning: | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from crossprod.cpp:5: misc.h: In instantiation of ‘std::vector > index_and_sort_top_n(std::vector&, int, int) [with T = double]’: crossprod.cpp:26:81: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: 26 | std::vector > res_index = index_and_sort_top_n(res, top_n, offset); /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ misc.h:49:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 49 | for (int i = 0; i < x.size(); i++) { | ~~^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:336:80: required from ‘struct Eigen::internal::evaluator > >’ misc.h:49:21: warning: 336 | typedef typename DenseCoeffsBase::CoeffReturnType CoeffReturnType; misc.h:49:21: warning: | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1505:8: required from ‘struct Eigen::internal::evaluator >’ misc.h:49:21: warning: 1505 | struct evaluator > misc.h:49:21: warning: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseBlock.h:438:43: required from ‘struct Eigen::internal::unary_evaluator, -1, -1, false>, Eigen::internal::IteratorBased, double>’ misc.h:49:21: warning: 438 | CoeffReadCost = evaluator::CoeffReadCost, misc.h:49:21: warning: | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1087:8: required from ‘struct Eigen::internal::block_evaluator, -1, -1, false, false>’ misc.h:49:21: warning: 1087 | struct block_evaluator misc.h:49:21: warning: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1034:8: required from ‘struct Eigen::internal::evaluator, -1, -1, false> >’ misc.h:49:21: warning: 1034 | struct evaluator > misc.h:49:21: warning: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1181:93: required from ‘Eigen::SparseMatrix<_Scalar, _Options, _StorageIndex>& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::operator=(const Eigen::SparseMatrixBase&) [with OtherDerived = Eigen::Block, -1, -1, false>; _Scalar = double; int _Options = 0; _StorageIndex = int]’ misc.h:49:21: warning: 1181 | const bool needToTranspose = (Flags & RowMajorBit) != (internal::evaluator::Flags & RowMajorBit); misc.h:49:21: warning: | ^~~~~ crossprod.cpp:186:95: required from here misc.h:49:21: warning: 186 | m2_batch = m2.middleRows(batch_indices.first, batch_indices.second - batch_indices.first); misc.h:49:21: warning: | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:277: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, -1, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1181:93: required from ‘Eigen::SparseMatrix<_Scalar, _Options, _StorageIndex>& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::operator=(const Eigen::SparseMatrixBase&) [with OtherDerived = Eigen::Block, -1, -1, false>; _Scalar = double; int _Options = 0; _StorageIndex = int]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 1181 | const bool needToTranspose = (Flags & RowMajorBit) != (internal::evaluator::Flags & RowMajorBit); /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ^~~~~ crossprod.cpp:186:95: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 186 | m2_batch = m2.middleRows(batch_indices.first, batch_indices.second - batch_indices.first); /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: 36 | class SparseCompressedBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: | ^~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from ‘class Eigen::SparseMatrix’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: 96 | class SparseMatrix /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1040:66: required from ‘void Eigen::internal::set_from_triplets(const InputIterator&, const InputIterator&, SparseMatrixType&, DupFunctor) [with InputIterator = __gnu_cxx::__normal_iterator*, std::vector > >; SparseMatrixType = Eigen::SparseMatrix; DupFunctor = scalar_sum_op]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: 1040 | SparseMatrix trMat(mat.rows(),mat.cols()); /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1110:92: required from ‘void Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::setFromTriplets(const InputIterators&, const InputIterators&) [with InputIterators = __gnu_cxx::__normal_iterator*, std::vector > >; _Scalar = double; int _Options = 0; _StorageIndex = int]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: 1110 | internal::set_from_triplets >(begin, end, *this, internal::scalar_sum_op()); /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ crossprod.cpp:250:22: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: 250 | out.setFromTriplets(tl.begin(), tl.end()); /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:336:80: required from ‘struct Eigen::internal::evaluator > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: 336 | typedef typename DenseCoeffsBase::CoeffReturnType CoeffReturnType; /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1505:8: required from ‘struct Eigen::internal::evaluator >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: 1505 | struct evaluator > /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1181:93: required from ‘Eigen::SparseMatrix<_Scalar, _Options, _StorageIndex>& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::operator=(const Eigen::SparseMatrixBase&) [with OtherDerived = Eigen::SparseMatrix; _Scalar = double; int _Options = 0; _StorageIndex = int]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: 1181 | const bool needToTranspose = (Flags & RowMajorBit) != (internal::evaluator::Flags & RowMajorBit); /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1063:7: required from ‘void Eigen::internal::set_from_triplets(const InputIterator&, const InputIterator&, SparseMatrixType&, DupFunctor) [with InputIterator = __gnu_cxx::__normal_iterator*, std::vector > >; SparseMatrixType = Eigen::SparseMatrix; DupFunctor = scalar_sum_op]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: 1063 | mat = trMat; /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: | ~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1110:92: required from ‘void Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::setFromTriplets(const InputIterators&, const InputIterators&) [with InputIterators = __gnu_cxx::__normal_iterator*, std::vector > >; _Scalar = double; int _Options = 0; _StorageIndex = int]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: 1110 | internal::set_from_triplets >(begin, end, *this, internal::scalar_sum_op()); /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ crossprod.cpp:250:22: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: 250 | out.setFromTriplets(tl.begin(), tl.end()); /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppEigen/include' -I'/usr/local/lib/R/library/RcppProgress/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c misc.cpp -o misc.o In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:205, from /usr/local/lib/R/library/RcppEigen/include/Eigen/Dense:1, from /usr/local/lib/R/library/RcppEigen/include/RcppEigenForward.h:28, from /usr/local/lib/R/library/RcppEigen/include/RcppEigen.h:25, from misc.cpp:2: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes] 49 | template<> struct is_arithmetic<__m128> { enum { value = true }; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes] 51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 222 | template<> struct unpacket_traits { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 228 | template<> struct unpacket_traits { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 1124 | ptranspose(PacketBlock& kernel) { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 1129 | ptranspose(PacketBlock& kernel) { | ^ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:174: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:165: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: 266 | Alignment = internal::traits::Alignment, /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: 24 | ResAlignment = traits >::Alignment /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: | ^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:271: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 302 | class DenseCoeffsBase : public DenseCoeffsBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 555 | class DenseCoeffsBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 41 | template class DenseBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 48 | template class MatrixBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 98 | class PlainObjectBase : public internal::dense_xpr_base::type /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 178 | class Matrix /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 273 | class Quaternion : public QuaternionBase > /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 27 | { /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 266 | Alignment = internal::traits::Alignment, /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 98 | ResAlignment = traits >::Alignment /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 302 | class DenseCoeffsBase : public DenseCoeffsBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 555 | class DenseCoeffsBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 41 | template class DenseBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 48 | template class MatrixBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 98 | class PlainObjectBase : public internal::dense_xpr_base::type /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 178 | class Matrix /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 273 | class Quaternion : public QuaternionBase > /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 102 | { /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/SparseCore:37, from /usr/local/lib/R/library/RcppEigen/include/Eigen/Sparse:26, from /usr/local/lib/R/library/RcppEigen/include/RcppEigenForward.h:29: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 36 | class SparseCompressedBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ^~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from ‘class Eigen::SparseMatrix’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 96 | class SparseMatrix /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 61 | typedef Triplet T; /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ misc.cpp: In function ‘std::vector get_row_l2(SpMat&)’: misc.cpp:21:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 21 | for (int i=0; i < out.size(); i++) { | ~~^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase > >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase > >’ misc.cpp:21:19: warning: 36 | class SparseCompressedBase misc.cpp:21:19: warning: | ^~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseTranspose.h:22:9: required from ‘class Eigen::internal::SparseTransposeImpl, 1024>’ misc.cpp:21:19: warning: 22 | class SparseTransposeImpl misc.cpp:21:19: warning: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseTranspose.h:45:37: required from ‘class Eigen::TransposeImpl, Eigen::Sparse>’ misc.cpp:21:19: warning: 45 | template class TransposeImpl misc.cpp:21:19: warning: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose >’ misc.cpp:21:19: warning: 52 | template class Transpose misc.cpp:21:19: warning: | ^~~~~~~~~ misc.cpp:30:23: required from here misc.cpp:21:19: warning: 30 | SpMat m1(m.transpose()); misc.cpp:21:19: warning: | ~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ misc.cpp: In function ‘std::vector softcos_row_mag(const SpMat&, const SpMat&, bool)’: misc.cpp:50:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 50 | for (int i=0; i < out.size(); i++) { | ~~^~~~~~~~~~~~ misc.cpp: In function ‘SpMat sm_prepare(SpMat&, Index, const SpMat&, bool, std::string)’: misc.cpp:81:16: warning: comparison of integer expressions of different signedness: ‘Eigen::Index’ {aka ‘long int’} and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 81 | if (m.rows() != index.size()) stop("number of rows is not equal to length of index"); | ~~~~~~~~~^~~~~~~~~~~~~~~ misc.cpp:84:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 84 | for (int i = 0; i < index.size(); i++) tvec[std::get<2>(index[i])] = i; | ~~^~~~~~~~~~~~~~ misc.cpp: In function ‘std::pair find_positions(Index&, double, double, double, double)’: misc.cpp:149:19: warning: variable ‘last_old’ set but not used [-Wunused-but-set-variable] 149 | Index::iterator last_old = std::lower_bound(last_group_low, last_group_up, max_o, search_order_l); | ^~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:336:80: required from ‘struct Eigen::internal::evaluator > >’ misc.cpp:149:19: warning: 336 | typedef typename DenseCoeffsBase::CoeffReturnType CoeffReturnType; misc.cpp:149:19: warning: | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1505:8: required from ‘struct Eigen::internal::evaluator >’ misc.cpp:149:19: warning: 1505 | struct evaluator > misc.cpp:149:19: warning: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator >’ misc.cpp:149:19: warning: 100 | struct evaluator misc.cpp:149:19: warning: | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseTranspose.h:58:63: required from ‘struct Eigen::internal::unary_evaluator >, Eigen::internal::IteratorBased, double>’ misc.cpp:149:19: warning: 58 | typedef typename evaluator::InnerIterator EvalIterator; misc.cpp:149:19: warning: | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator > >’ misc.cpp:149:19: warning: 90 | struct evaluator : public unary_evaluator misc.cpp:149:19: warning: | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:687:97: required from ‘Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::SparseMatrix(const Eigen::SparseMatrixBase&) [with OtherDerived = Eigen::Transpose >; _Scalar = double; int _Options = 0; _StorageIndex = int]’ misc.cpp:149:19: warning: 687 | const bool needToTranspose = (Flags & RowMajorBit) != (internal::evaluator::Flags & RowMajorBit); misc.cpp:149:19: warning: | ^~~~~ misc.cpp:30:25: required from here misc.cpp:149:19: warning: 30 | SpMat m1(m.transpose()); misc.cpp:149:19: warning: | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from misc.cpp:5: misc.h: In instantiation of ‘std::vector > index_and_sort(std::vector&, std::vector&) [with T1 = double; T2 = double]’: misc.cpp:127:44: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 127 | Index out = index_and_sort(g,o); /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ misc.h:37:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 37 | for (int i = 0; i < x.size(); i++) { | ~~^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase >’ misc.h:37:21: warning: 36 | class SparseCompressedBase misc.h:37:21: warning: | ^~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from ‘class Eigen::SparseMatrix’ misc.h:37:21: warning: 96 | class SparseMatrix misc.h:37:21: warning: | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1040:66: required from ‘void Eigen::internal::set_from_triplets(const InputIterator&, const InputIterator&, SparseMatrixType&, DupFunctor) [with InputIterator = __gnu_cxx::__normal_iterator*, std::vector > >; SparseMatrixType = Eigen::SparseMatrix; DupFunctor = scalar_sum_op]’ misc.h:37:21: warning: 1040 | SparseMatrix trMat(mat.rows(),mat.cols()); misc.h:37:21: warning: | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1110:92: required from ‘void Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::setFromTriplets(const InputIterators&, const InputIterators&) [with InputIterators = __gnu_cxx::__normal_iterator*, std::vector > >; _Scalar = double; int _Options = 0; _StorageIndex = int]’ misc.h:37:21: warning: 1110 | internal::set_from_triplets >(begin, end, *this, internal::scalar_sum_op()); misc.h:37:21: warning: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ misc.cpp:75:22: required from here misc.h:37:21: warning: 75 | out.setFromTriplets(tl.begin(), tl.end()); misc.h:37:21: warning: | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:336:80: required from ‘struct Eigen::internal::evaluator > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: 336 | typedef typename DenseCoeffsBase::CoeffReturnType CoeffReturnType; /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1505:8: required from ‘struct Eigen::internal::evaluator >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: 1505 | struct evaluator > /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1181:93: required from ‘Eigen::SparseMatrix<_Scalar, _Options, _StorageIndex>& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::operator=(const Eigen::SparseMatrixBase&) [with OtherDerived = Eigen::SparseMatrix; _Scalar = double; int _Options = 0; _StorageIndex = int]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: 1181 | const bool needToTranspose = (Flags & RowMajorBit) != (internal::evaluator::Flags & RowMajorBit); /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1063:7: required from ‘void Eigen::internal::set_from_triplets(const InputIterator&, const InputIterator&, SparseMatrixType&, DupFunctor) [with InputIterator = __gnu_cxx::__normal_iterator*, std::vector > >; SparseMatrixType = Eigen::SparseMatrix; DupFunctor = scalar_sum_op]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: 1063 | mat = trMat; /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: | ~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1110:92: required from ‘void Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::setFromTriplets(const InputIterators&, const InputIterators&) [with InputIterators = __gnu_cxx::__normal_iterator*, std::vector > >; _Scalar = double; int _Options = 0; _StorageIndex = int]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: 1110 | internal::set_from_triplets >(begin, end, *this, internal::scalar_sum_op()); /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ misc.cpp:75:22: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: 75 | out.setFromTriplets(tl.begin(), tl.end()); /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppEigen/include' -I'/usr/local/lib/R/library/RcppProgress/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c sim_measures.cpp -o sim_measures.o In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:205, from /usr/local/lib/R/library/RcppEigen/include/Eigen/Dense:1, from /usr/local/lib/R/library/RcppEigen/include/RcppEigenForward.h:28, from /usr/local/lib/R/library/RcppEigen/include/RcppEigen.h:25, from sim_measures.cpp:2: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes] 49 | template<> struct is_arithmetic<__m128> { enum { value = true }; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes] 51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 222 | template<> struct unpacket_traits { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 228 | template<> struct unpacket_traits { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 1124 | ptranspose(PacketBlock& kernel) { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 1129 | ptranspose(PacketBlock& kernel) { | ^ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:174: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:165: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: 266 | Alignment = internal::traits::Alignment, /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: 24 | ResAlignment = traits >::Alignment /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: | ^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:271: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 302 | class DenseCoeffsBase : public DenseCoeffsBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 555 | class DenseCoeffsBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 41 | template class DenseBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 48 | template class MatrixBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 98 | class PlainObjectBase : public internal::dense_xpr_base::type /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 178 | class Matrix /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 273 | class Quaternion : public QuaternionBase > /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 27 | { /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 266 | Alignment = internal::traits::Alignment, /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 98 | ResAlignment = traits >::Alignment /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 302 | class DenseCoeffsBase : public DenseCoeffsBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 555 | class DenseCoeffsBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 41 | template class DenseBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 48 | template class MatrixBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 98 | class PlainObjectBase : public internal::dense_xpr_base::type /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 178 | class Matrix /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 273 | class Quaternion : public QuaternionBase > /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 102 | { /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/SparseCore:37, from /usr/local/lib/R/library/RcppEigen/include/Eigen/Sparse:26, from /usr/local/lib/R/library/RcppEigen/include/RcppEigenForward.h:29: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 36 | class SparseCompressedBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ^~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from ‘class Eigen::SparseMatrix’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 96 | class SparseMatrix /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 61 | typedef Triplet T; /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ sim_measures.cpp: In function ‘void as_pct(int, const SpMat&, std::vector&)’: sim_measures.cpp:16:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 16 | for (int res_i = 0; res_i < res.size(); res_i++) { | ~~~~~~^~~~~~~~~~~~ sim_measures.cpp: In function ‘void pnorm_filter(std::vector&, bool, bool, double)’: sim_measures.cpp:31:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 31 | for (int i=0; i < res.size(); i++) { | ~~^~~~~~~~~~~~ sim_measures.cpp: In function ‘void pbeta_filter(std::vector&, bool, double)’: sim_measures.cpp:51:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 51 | for (int i=0; i < res.size(); i++) { | ~~^~~~~~~~~~~~ sim_measures.cpp: In function ‘void pdisparity_filter(std::vector&, double, double)’: sim_measures.cpp:62:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 62 | for (int i=0; i < res.size(); i++) { | ~~^~~~~~~~~~~~ sim_measures.cpp: In function ‘void sim_cp_lookup(int, const SpMat&, const SpMat&, std::vector&, std::vector&, const SpMat&, bool)’: sim_measures.cpp:185:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int i=0; i < res.size(); i++) | ~~^~~~~~~~~~~~ sim_measures.cpp: In function ‘void sim_cp_lookup2(int, const SpMat&, const SpMat&, std::vector&, std::vector&, const SpMat&, bool)’: sim_measures.cpp:246:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 246 | for (int i=0; i < res.size(); i++) | ~~^~~~~~~~~~~~ sim_measures.cpp: In function ‘sim_cp_lookup(int, Eigen::SparseMatrix const&, Eigen::SparseMatrix const&, std::vector >&, std::vector >&, Eigen::SparseMatrix const&, bool)’: sim_measures.cpp:164:17: warning: ‘xvalue’ may be used uninitialized [-Wmaybe-uninitialized] 164 | doc_sum += xvalue; | ~~~~~~~~^~~~~~~~~ sim_measures.cpp:146:12: note: ‘xvalue’ was declared here 146 | double xvalue; | ^~~~~~ g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppEigen/include' -I'/usr/local/lib/R/library/RcppProgress/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c window_corpus_comparison.cpp -o window_corpus_comparison.o In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:205, from /usr/local/lib/R/library/RcppEigen/include/Eigen/Dense:1, from /usr/local/lib/R/library/RcppEigen/include/RcppEigenForward.h:28, from /usr/local/lib/R/library/RcppEigen/include/RcppEigen.h:25, from window_corpus_comparison.cpp:1: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes] 49 | template<> struct is_arithmetic<__m128> { enum { value = true }; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes] 51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 222 | template<> struct unpacket_traits { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 228 | template<> struct unpacket_traits { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 1124 | ptranspose(PacketBlock& kernel) { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 1129 | ptranspose(PacketBlock& kernel) { | ^ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:174: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:165: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: 266 | Alignment = internal::traits::Alignment, /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: 24 | ResAlignment = traits >::Alignment /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: | ^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:271: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 302 | class DenseCoeffsBase : public DenseCoeffsBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 555 | class DenseCoeffsBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 41 | template class DenseBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 48 | template class MatrixBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 98 | class PlainObjectBase : public internal::dense_xpr_base::type /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 178 | class Matrix /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 273 | class Quaternion : public QuaternionBase > /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 27 | { /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 266 | Alignment = internal::traits::Alignment, /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 98 | ResAlignment = traits >::Alignment /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 302 | class DenseCoeffsBase : public DenseCoeffsBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 555 | class DenseCoeffsBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 41 | template class DenseBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 48 | template class MatrixBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 98 | class PlainObjectBase : public internal::dense_xpr_base::type /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 178 | class Matrix /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 273 | class Quaternion : public QuaternionBase > /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 102 | { /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/SparseCore:37, from /usr/local/lib/R/library/RcppEigen/include/Eigen/Sparse:26, from /usr/local/lib/R/library/RcppEigen/include/RcppEigenForward.h:29: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 36 | class SparseCompressedBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ^~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from ‘class Eigen::SparseMatrix’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 96 | class SparseMatrix /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 61 | typedef Triplet T; /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ window_corpus_comparison.cpp: In function ‘SpMat window_corp_comp(SpMat&, SpMat&, Rcpp::NumericVector, Rcpp::NumericVector, int, int, double, double, double)’: window_corpus_comparison.cpp:67:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 67 | for (int res_i = 0; res_i < res.size(); res_i++) { | ~~~~~~^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase >’ window_corpus_comparison.cpp:67:31: warning: 36 | class SparseCompressedBase window_corpus_comparison.cpp:67:31: warning: | ^~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from ‘class Eigen::SparseMatrix’ window_corpus_comparison.cpp:67:31: warning: 96 | class SparseMatrix window_corpus_comparison.cpp:67:31: warning: | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1040:66: required from ‘void Eigen::internal::set_from_triplets(const InputIterator&, const InputIterator&, SparseMatrixType&, DupFunctor) [with InputIterator = __gnu_cxx::__normal_iterator*, std::vector > >; SparseMatrixType = Eigen::SparseMatrix; DupFunctor = scalar_sum_op]’ window_corpus_comparison.cpp:67:31: warning: 1040 | SparseMatrix trMat(mat.rows(),mat.cols()); window_corpus_comparison.cpp:67:31: warning: | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1110:92: required from ‘void Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::setFromTriplets(const InputIterators&, const InputIterators&) [with InputIterators = __gnu_cxx::__normal_iterator*, std::vector > >; _Scalar = double; int _Options = 0; _StorageIndex = int]’ window_corpus_comparison.cpp:67:31: warning: 1110 | internal::set_from_triplets >(begin, end, *this, internal::scalar_sum_op()); window_corpus_comparison.cpp:67:31: warning: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ window_corpus_comparison.cpp:75:22: required from here window_corpus_comparison.cpp:67:31: warning: 75 | out.setFromTriplets(tl.begin(), tl.end()); window_corpus_comparison.cpp:67:31: warning: | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:336:80: required from ‘struct Eigen::internal::evaluator > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: 336 | typedef typename DenseCoeffsBase::CoeffReturnType CoeffReturnType; /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1505:8: required from ‘struct Eigen::internal::evaluator >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: 1505 | struct evaluator > /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1181:93: required from ‘Eigen::SparseMatrix<_Scalar, _Options, _StorageIndex>& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::operator=(const Eigen::SparseMatrixBase&) [with OtherDerived = Eigen::SparseMatrix; _Scalar = double; int _Options = 0; _StorageIndex = int]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: 1181 | const bool needToTranspose = (Flags & RowMajorBit) != (internal::evaluator::Flags & RowMajorBit); /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1063:7: required from ‘void Eigen::internal::set_from_triplets(const InputIterator&, const InputIterator&, SparseMatrixType&, DupFunctor) [with InputIterator = __gnu_cxx::__normal_iterator*, std::vector > >; SparseMatrixType = Eigen::SparseMatrix; DupFunctor = scalar_sum_op]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: 1063 | mat = trMat; /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: | ~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1110:92: required from ‘void Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::setFromTriplets(const InputIterators&, const InputIterators&) [with InputIterators = __gnu_cxx::__normal_iterator*, std::vector > >; _Scalar = double; int _Options = 0; _StorageIndex = int]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: 1110 | internal::set_from_triplets >(begin, end, *this, internal::scalar_sum_op()); /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ window_corpus_comparison.cpp:75:22: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: 75 | out.setFromTriplets(tl.begin(), tl.end()); /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:336:80: required from ‘struct Eigen::internal::evaluator > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 336 | typedef typename DenseCoeffsBase::CoeffReturnType CoeffReturnType; /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1505:8: required from ‘struct Eigen::internal::evaluator >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 1505 | struct evaluator > /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseAssign.h:77:20: required from ‘void Eigen::internal::assign_sparse_to_sparse(DstXprType&, const SrcXprType&) [with DstXprType = Eigen::SparseMatrix; SrcXprType = Eigen::SparseMatrix]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 77 | SrcEvaluatorType srcEvaluator(src); /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseAssign.h:132:28: required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::SparseMatrix; SrcXprType = Eigen::SparseMatrix; Functor = Eigen::internal::assign_op; typename DstXprType::Scalar = double; typename SrcXprType::Scalar = double]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 132 | assign_sparse_to_sparse(dst.derived(), src.derived()); /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::SparseMatrix; Src = Eigen::SparseMatrix; Func = assign_op]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 890 | Assignment::run(actualDst, src, func); /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:917:27: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&) [with Dst = Eigen::SparseMatrix; Src = Eigen::SparseMatrix]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 917 | call_assignment_no_alias(dst, src, internal::assign_op()); /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseAssign.h:45:37: required from ‘Derived& Eigen::SparseMatrixBase::operator=(const Derived&) [with Derived = Eigen::SparseMatrix]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 45 | internal::call_assignment_no_alias(derived(), other.derived()); /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:778:26: required from ‘Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::operator=(const Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>&) [with _Scalar = double; int _Options = 0; _StorageIndex = int]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 778 | Base::operator=(other); /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ~~~~~~~~~~~~~~~^~~~~~~ window_corpus_comparison.cpp:54:51: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 54 | m1 = sm_prepare(m1, index1, simmat, true, "none"); // sort and transpose m1 /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppEigen/include' -I'/usr/local/lib/R/library/RcppProgress/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c window_iterator.cpp -o window_iterator.o In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:205, from /usr/local/lib/R/library/RcppEigen/include/Eigen/Dense:1, from /usr/local/lib/R/library/RcppEigen/include/RcppEigenForward.h:28, from /usr/local/lib/R/library/RcppEigen/include/RcppEigen.h:25, from window_iterator.h:4, from window_iterator.cpp:1: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes] 49 | template<> struct is_arithmetic<__m128> { enum { value = true }; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes] 51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 222 | template<> struct unpacket_traits { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 228 | template<> struct unpacket_traits { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 1124 | ptranspose(PacketBlock& kernel) { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 1129 | ptranspose(PacketBlock& kernel) { | ^ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:174: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:165: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: 266 | Alignment = internal::traits::Alignment, /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: 24 | ResAlignment = traits >::Alignment /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: | ^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:271: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 302 | class DenseCoeffsBase : public DenseCoeffsBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 555 | class DenseCoeffsBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 41 | template class DenseBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 48 | template class MatrixBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 98 | class PlainObjectBase : public internal::dense_xpr_base::type /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 178 | class Matrix /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 273 | class Quaternion : public QuaternionBase > /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 27 | { /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 266 | Alignment = internal::traits::Alignment, /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 98 | ResAlignment = traits >::Alignment /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 302 | class DenseCoeffsBase : public DenseCoeffsBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 555 | class DenseCoeffsBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 41 | template class DenseBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 48 | template class MatrixBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 98 | class PlainObjectBase : public internal::dense_xpr_base::type /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 178 | class Matrix /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 273 | class Quaternion : public QuaternionBase > /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: 102 | { /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/SparseCore:37, from /usr/local/lib/R/library/RcppEigen/include/Eigen/Sparse:26, from /usr/local/lib/R/library/RcppEigen/include/RcppEigenForward.h:29: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 36 | class SparseCompressedBase /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ^~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from ‘class Eigen::SparseMatrix’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 96 | class SparseMatrix /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: 61 | typedef Triplet T; /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ window_iterator.cpp: In member function ‘void windowIterator::start(const SpMat&)’: window_iterator.cpp:4:18: warning: comparison of integer expressions of different signedness: ‘Eigen::Index’ {aka ‘long int’} and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 4 | if (!(m.cols() == index2.size())) stop("Number of columns in m needs to match the size of index2"); | ~~~~~~~~~^~~~~~~~~~~~~~~~ window_iterator.cpp:11:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 11 | for (; pos < index1.size(); pos++) { | ~~~~^~~~~~~~~~~~~~~ window_iterator.cpp:18:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 18 | for (int j = 0; j < index2.size(); j++) { | ~~^~~~~~~~~~~~~~~ window_iterator.cpp: In member function ‘void windowIterator::increment(const SpMat&)’: window_iterator.cpp:57:11: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 57 | if (pos == index1.size() - 1) { | ~~~~^~~~~~~~~~~~~~~~~~~~ window_iterator.cpp:64:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (;ls < index2.size(); ls++) { | ~~~^~~~~~~~~~~~~~~ window_iterator.cpp:72:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 72 | for (;le < index2.size(); le++) { | ~~~^~~~~~~~~~~~~~~ window_iterator.cpp:80:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 80 | for (;rs < index2.size(); rs++) { | ~~~^~~~~~~~~~~~~~~ window_iterator.cpp:88:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 88 | for (;re < index2.size(); re++) { | ~~~^~~~~~~~~~~~~~~ window_iterator.cpp:91:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 91 | if (re == index2.size() - 1) done=true; // if end of right window (re) is not in sight (beyond last value in index2), we're done | ~~~^~~~~~~~~~~~~~~~~~~~ window_iterator.cpp: In member function ‘windowIterator::start(Eigen::SparseMatrix const&)’: window_iterator.cpp:28:27: warning: ‘date’ may be used uninitialized [-Wmaybe-uninitialized] 28 | if (loop_date < (date + lwindow_border)) { | ~~~~~~^~~~~~~~~~~~~~~~~ window_iterator.cpp:7:7: note: ‘date’ was declared here 7 | int date, first_date, loop_date; | ^~~~ g++ -std=gnu++17 -shared -L/usr/lib64/R/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o RNewsflow.so RcppExports.o combine_dtm_terms.o crossprod.o misc.o sim_measures.o window_corpus_comparison.o window_iterator.o -L/usr/lib64/R/lib -lR installing to /builddir/build/BUILDROOT/R-CRAN-RNewsflow-1.2.8-1.fc40.copr7359996.x86_64/usr/local/lib/R/library/00LOCK-RNewsflow/00new/RNewsflow/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘RNewsflow’ finding HTML links ... done as_document_network html compare_documents html create_document_network html create_queries html delete_duplicates html directed_network_plot html docnet html document_network_plot html filter_window html get_doc_terms html get_overlap_terms html hourdiff_range_thresholds html network_aggregate html newsflow_compare html only_first_match html rnewsflow_dfm html show_window html tcrossprod_sparse html term_char_sim html term_day_dist html term_innovation html term_intersect html term_union html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (RNewsflow) + test -d RNewsflow/src + cd RNewsflow/src + rm -f RcppExports.o combine_dtm_terms.o crossprod.o misc.o sim_measures.o window_corpus_comparison.o window_iterator.o RNewsflow.so + rm -f /builddir/build/BUILDROOT/R-CRAN-RNewsflow-1.2.8-1.fc40.copr7359996.x86_64/usr/local/lib/R/library/R.css + find /builddir/build/BUILDROOT/R-CRAN-RNewsflow-1.2.8-1.fc40.copr7359996.x86_64/usr/local/lib/R/library -type f -exec sed -i s@/builddir/build/BUILDROOT/R-CRAN-RNewsflow-1.2.8-1.fc40.copr7359996.x86_64@@g '{}' ';' + /usr/bin/find-debuginfo -j2 --strict-build-id -m -i --build-id-seed 1.2.8-1.fc40.copr7359996 --unique-debug-suffix -1.2.8-1.fc40.copr7359996.x86_64 --unique-debug-src-base R-CRAN-RNewsflow-1.2.8-1.fc40.copr7359996.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/RNewsflow find-debuginfo: starting Extracting debug info from 1 files DWARF-compressing 1 files sepdebugcrcfix: Updated 1 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/R-CRAN-RNewsflow-1.2.8-1.fc40.copr7359996.x86_64 98 blocks find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/redhat/brp-mangle-shebangs + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j2 + /usr/lib/rpm/redhat/brp-python-hardlink Processing files: R-CRAN-RNewsflow-1.2.8-1.fc40.copr7359996.x86_64 Provides: R-CRAN-RNewsflow = 1.2.8-1.fc40.copr7359996 R-CRAN-RNewsflow(x86-64) = 1.2.8-1.fc40.copr7359996 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libR.so()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.11)(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) rtld(GNU_HASH) Processing files: R-CRAN-RNewsflow-debugsource-1.2.8-1.fc40.copr7359996.x86_64 Provides: R-CRAN-RNewsflow-debugsource = 1.2.8-1.fc40.copr7359996 R-CRAN-RNewsflow-debugsource(x86-64) = 1.2.8-1.fc40.copr7359996 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: R-CRAN-RNewsflow-debuginfo-1.2.8-1.fc40.copr7359996.x86_64 Provides: R-CRAN-RNewsflow-debuginfo = 1.2.8-1.fc40.copr7359996 R-CRAN-RNewsflow-debuginfo(x86-64) = 1.2.8-1.fc40.copr7359996 debuginfo(build-id) = 90fb565f4a8906616c6f3c6819e23da59e12abd9 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: R-CRAN-RNewsflow-debugsource(x86-64) = 1.2.8-1.fc40.copr7359996 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/R-CRAN-RNewsflow-1.2.8-1.fc40.copr7359996.x86_64 Wrote: /builddir/build/RPMS/R-CRAN-RNewsflow-1.2.8-1.fc40.copr7359996.x86_64.rpm Wrote: /builddir/build/RPMS/R-CRAN-RNewsflow-debugsource-1.2.8-1.fc40.copr7359996.x86_64.rpm Wrote: /builddir/build/RPMS/R-CRAN-RNewsflow-debuginfo-1.2.8-1.fc40.copr7359996.x86_64.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.CyEWQs + umask 022 + cd /builddir/build/BUILD + cd RNewsflow + /usr/bin/rm -rf /builddir/build/BUILDROOT/R-CRAN-RNewsflow-1.2.8-1.fc40.copr7359996.x86_64 + RPM_EC=0 ++ jobs -p + exit 0 Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.h8511F + umask 022 + cd /builddir/build/BUILD + rm -rf /builddir/build/BUILD/RNewsflow-SPECPARTS + rm -rf RNewsflow RNewsflow.gemspec + RPM_EC=0 ++ jobs -p + exit 0 RPM build warnings: source_date_epoch_from_changelog set but %changelog is missing Finish: rpmbuild R-CRAN-RNewsflow-1.2.8-1.fc40.copr7359996.src.rpm Finish: build phase for R-CRAN-RNewsflow-1.2.8-1.fc40.copr7359996.src.rpm INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-40-x86_64-1714185454.719422/root/var/log/dnf5.log INFO: Done(/var/lib/copr-rpmbuild/results/R-CRAN-RNewsflow-1.2.8-1.fc40.copr7359996.src.rpm) Config(child) 1 minutes 13 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool Package info: { "packages": [ { "name": "R-CRAN-RNewsflow", "epoch": null, "version": "1.2.8", "release": "1.fc40.copr7359996", "arch": "src" }, { "name": "R-CRAN-RNewsflow", "epoch": null, "version": "1.2.8", "release": "1.fc40.copr7359996", "arch": "x86_64" }, { "name": "R-CRAN-RNewsflow-debugsource", "epoch": null, "version": "1.2.8", "release": "1.fc40.copr7359996", "arch": "x86_64" }, { "name": "R-CRAN-RNewsflow-debuginfo", "epoch": null, "version": "1.2.8", "release": "1.fc40.copr7359996", "arch": "x86_64" } ] } RPMResults finished