%global __brp_check_rpaths %{nil}
%global packname  OmnibusFisher
%global packver   1.0
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          1.0
Release:          3%{?dist}%{?buildtag}
Summary:          A Modified Fisher’s Method to Test Overall Gene-Level Effect

License:          GPL (>= 2)
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel
Requires:         R-core
BuildArch:        noarch
BuildRequires:    R-CRAN-CompQuadForm 
BuildRequires:    R-CRAN-stringr 
BuildRequires:    R-CRAN-survey 
Requires:         R-CRAN-CompQuadForm 
Requires:         R-CRAN-stringr 
Requires:         R-CRAN-survey 

%description
The separate p-values of SNPs, RNA expressions and DNA methylations are
calculated by KM regression. The correlation between different omics data
are taken into account. This method can be applied to either samples with
all three types of omics data or samples with two types.

%prep
%setup -q -c -n %{packname}


%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css

%files
%{rlibdir}/%{packname}