%global __brp_check_rpaths %{nil}
%global __requires_exclude ^libmpi
%global packname  ipmr
%global packver   0.0.7
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          0.0.7
Release:          1%{?dist}%{?buildtag}
Summary:          Integral Projection Models

License:          MIT + file LICENSE
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel >= 3.4
Requires:         R-core >= 3.4
BuildRequires:    R-CRAN-purrr >= 0.3.0
BuildRequires:    R-CRAN-rlang >= 0.3.0
BuildRequires:    R-graphics 
BuildRequires:    R-grDevices 
BuildRequires:    R-CRAN-magrittr 
BuildRequires:    R-methods 
BuildRequires:    R-stats 
BuildRequires:    R-utils 
BuildRequires:    R-CRAN-Rcpp 
Requires:         R-CRAN-purrr >= 0.3.0
Requires:         R-CRAN-rlang >= 0.3.0
Requires:         R-graphics 
Requires:         R-grDevices 
Requires:         R-CRAN-magrittr 
Requires:         R-methods 
Requires:         R-stats 
Requires:         R-utils 
Requires:         R-CRAN-Rcpp 

%description
Flexibly implements Integral Projection Models using a mathematical(ish)
syntax. This package will not help with the vital rate modeling process,
but will help convert those regression models into an IPM. 'ipmr' handles
density dependence and environmental stochasticity, with a couple of
options for implementing the latter. In addition, provides functions to
avoid unintentional eviction of individuals from models. Additionally,
provides model diagnostic tools, plotting functionality,
stochastic/deterministic simulations, and analysis tools. Integral
projection models are described in depth by Easterling et al. (2000)
<doi:10.1890/0012-9658(2000)081[0694:SSSAAN]2.0.CO;2>, Merow et al. (2013)
<doi:10.1111/2041-210X.12146>, Rees et al. (2014)
<doi:10.1111/1365-2656.12178>, and Metcalf et al. (2015)
<doi:10.1111/2041-210X.12405>. Williams et al. (2012)
<doi:10.1890/11-2147.1> discuss the problem of unintentional eviction.

%prep
%setup -q -c -n %{packname}

# fix end of executable files
find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
# prevent binary stripping
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
[ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \
  sed -i 's@-g0@@g' {} \; || true
# don't allow local prefix in executable scripts
find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;

%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
# remove buildroot from installed files
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;

%files
%{rlibdir}/%{packname}