%global __brp_check_rpaths %{nil} %global __requires_exclude ^libmpi %global packname TDA %global packver 1.9.1 %global rlibdir /usr/local/lib/R/library Name: R-CRAN-%{packname} Version: 1.9.1 Release: 1%{?dist}%{?buildtag} Summary: Statistical Tools for Topological Data Analysis License: GPL-3 URL: https://cran.r-project.org/package=%{packname} Source0: %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz BuildRequires: gmp-devel BuildRequires: R-devel >= 3.1.0 Requires: R-core >= 3.1.0 BuildRequires: R-CRAN-BH >= 1.81.0.1 BuildRequires: R-CRAN-Rcpp >= 0.11.0 BuildRequires: R-CRAN-FNN BuildRequires: R-CRAN-igraph BuildRequires: R-parallel BuildRequires: R-CRAN-scales BuildRequires: R-CRAN-RcppEigen Requires: R-CRAN-Rcpp >= 0.11.0 Requires: R-CRAN-FNN Requires: R-CRAN-igraph Requires: R-parallel Requires: R-CRAN-scales %description Tools for the statistical analysis of persistent homology and for density clustering. For that, this package provides an R interface for the efficient algorithms of the C++ libraries 'GUDHI' , 'Dionysus' , and 'PHAT' . This package also implements the methods in Fasy et al. (2014) and Chazal et al. (2014) for analyzing the statistical significance of persistent homology features. %prep %setup -q -c -n %{packname} # fix end of executable files find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \; # prevent binary stripping [ -d %{packname}/src ] && find %{packname}/src -type f -exec \ sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true [ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \ sed -i 's@-g0@@g' {} \; || true # don't allow local prefix in executable scripts find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \; %build %install mkdir -p %{buildroot}%{rlibdir} %{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname} test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so) rm -f %{buildroot}%{rlibdir}/R.css # remove buildroot from installed files find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \; %files %{rlibdir}/%{packname}