%global __brp_check_rpaths %{nil}
%global packname  hybridModels
%global packver   0.3.7
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          0.3.7
Release:          2%{?dist}%{?buildtag}
Summary:          An R Package for the Stochastic Simulation of Disease Spreadingin Dynamic Networks

License:          GPL (>= 2)
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel >= 3.3.1
Requires:         R-core >= 3.3.1
BuildArch:        noarch
BuildRequires:    R-CRAN-doParallel 
BuildRequires:    R-CRAN-doRNG 
BuildRequires:    R-CRAN-foreach 
BuildRequires:    R-CRAN-ggplot2 
BuildRequires:    R-CRAN-GillespieSSA 
BuildRequires:    R-parallel 
BuildRequires:    R-CRAN-reshape2 
BuildRequires:    R-stats 
BuildRequires:    R-CRAN-stringr 
BuildRequires:    R-grid 
Requires:         R-CRAN-doParallel 
Requires:         R-CRAN-doRNG 
Requires:         R-CRAN-foreach 
Requires:         R-CRAN-ggplot2 
Requires:         R-CRAN-GillespieSSA 
Requires:         R-parallel 
Requires:         R-CRAN-reshape2 
Requires:         R-stats 
Requires:         R-CRAN-stringr 
Requires:         R-grid 

%description
Simulates stochastic hybrid models for transmission of infectious diseases
in dynamic networks. It is a metapopulation model in which each node in
the network is a sub-population and disease spreads within nodes and among
them, combining two approaches: stochastic simulation algorithm
(<doi:10.1146/annurev.physchem.58.032806.104637>) and individual-based
approach, respectively. Equations that models spread within nodes are
customizable and there are two link types among nodes: migration and
influence (commuting). More information in Fernando S. Marques, Jose H. H.
Grisi-Filho, Marcos Amaku et al. (2020) <doi:10.18637/jss.v094.i06>.

%prep
%setup -q -c -n %{packname}

find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true

%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;

%files
%{rlibdir}/%{packname}