%global __brp_check_rpaths %{nil}
%global packname  maxcombo
%global packver   1.0
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          1.0
Release:          1%{?dist}%{?buildtag}
Summary:          The Group Sequential Max-Combo Test for Comparing Survival Curves

License:          GPL-2
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel
Requires:         R-core
BuildArch:        noarch
BuildRequires:    R-CRAN-magrittr 
BuildRequires:    R-CRAN-purrr 
BuildRequires:    R-CRAN-rlang 
BuildRequires:    R-CRAN-mstate 
BuildRequires:    R-CRAN-MCMCpack 
BuildRequires:    R-CRAN-dplyr 
BuildRequires:    R-CRAN-mvtnorm 
BuildRequires:    R-CRAN-survival 
Requires:         R-CRAN-magrittr 
Requires:         R-CRAN-purrr 
Requires:         R-CRAN-rlang 
Requires:         R-CRAN-mstate 
Requires:         R-CRAN-MCMCpack 
Requires:         R-CRAN-dplyr 
Requires:         R-CRAN-mvtnorm 
Requires:         R-CRAN-survival 

%description
Functions for comparing survival curves using the max-combo test at a
single timepoint or repeatedly at successive respective timepoints while
controlling type I error (i.e., the group sequential setting), as
published by Prior (2020) <doi:10.1177/0962280220931560>.  The max-combo
test is a generalization of the weighted log-rank test, which itself is a
generalization of the log-rank test, which is a commonly used statistical
test for comparing survival curves, e.g., during or after a clinical trial
as part of an effort to determine if a new drug or therapy is more
effective at delaying undesirable outcomes than an established drug or
therapy or a placebo.

%prep
%setup -q -c -n %{packname}

# fix end of executable files
find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
# prevent binary stripping
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
# don't allow local prefix in executable scripts
find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;

%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
# remove buildroot from installed files
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;

%files
%{rlibdir}/%{packname}