%global __brp_check_rpaths %{nil}
%global __requires_exclude ^libmpi
%global packname  cenROC
%global packver   2.0.0
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          2.0.0
Release:          1%{?dist}%{?buildtag}
Summary:          Estimating Time-Dependent ROC Curve and AUC for Censored Data

License:          GPL (>= 2)
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel >= 3.5.0
Requires:         R-core >= 3.5.0
BuildRequires:    R-CRAN-Rcpp >= 1.0.0
BuildRequires:    R-CRAN-icenReg 
BuildRequires:    R-CRAN-condSURV 
BuildRequires:    R-CRAN-survival 
BuildRequires:    R-stats 
BuildRequires:    R-graphics 
BuildRequires:    R-methods 
BuildRequires:    R-CRAN-RcppEigen 
Requires:         R-CRAN-Rcpp >= 1.0.0
Requires:         R-CRAN-icenReg 
Requires:         R-CRAN-condSURV 
Requires:         R-CRAN-survival 
Requires:         R-stats 
Requires:         R-graphics 
Requires:         R-methods 

%description
Contains functions to estimate a smoothed and a non-smoothed (empirical)
time-dependent receiver operating characteristic curve and the
corresponding area under the receiver operating characteristic curve and
the optimal cutoff point for the right and interval censored survival
data. See Beyene and El Ghouch (2020)<doi:10.1002/sim.8671> and Beyene and
El Ghouch (2022) <doi:10.1002/bimj.202000382>.

%prep
%setup -q -c -n %{packname}

# fix end of executable files
find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
# prevent binary stripping
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
[ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \
  sed -i 's@-g0@@g' {} \; || true
# don't allow local prefix in executable scripts
find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;

%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
# remove buildroot from installed files
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;

%files
%{rlibdir}/%{packname}