fillInputDataFrame {WebGestaltR}R Documentation

Fill relation data frame for GSEA input

Description

Fill 1 for gene in gene set

Usage

fillInputDataFrame(gmt, genes, geneSets)

Arguments

gmt

A Data Frame with geneSet and gene columns from the GMT file

genes

A vector of genes

geneSets

A vector of gene sets

Value

A Data Frame with the first column of gene and 1 or 0 for other columns of gene sets.

Author(s)

Yuxing Liao


[Package WebGestaltR version 0.4.6 Index]