%global __brp_check_rpaths %{nil}
%global __requires_exclude ^libmpi
%global packname  rtmpt
%global packver   2.0-1
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          2.0.1
Release:          1%{?dist}%{?buildtag}
Summary:          Fitting (Exponential/Diffusion) RT-MPT Models

License:          GPL (>= 2)
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    gsl-devel
BuildRequires:    R-devel >= 3.5.0
Requires:         R-core >= 3.5.0
BuildRequires:    R-CRAN-coda 
BuildRequires:    R-CRAN-data.table 
BuildRequires:    R-CRAN-loo 
BuildRequires:    R-methods 
BuildRequires:    R-CRAN-Ryacas 
BuildRequires:    R-stats 
BuildRequires:    R-CRAN-stringr 
BuildRequires:    R-CRAN-truncnorm 
BuildRequires:    R-utils 
Requires:         R-CRAN-coda 
Requires:         R-CRAN-data.table 
Requires:         R-CRAN-loo 
Requires:         R-methods 
Requires:         R-CRAN-Ryacas 
Requires:         R-stats 
Requires:         R-CRAN-stringr 
Requires:         R-CRAN-truncnorm 
Requires:         R-utils 

%description
Fit (exponential or diffusion) response-time extended multinomial
processing tree (RT-MPT) models by Klauer and Kellen (2018)
<doi:10.1016/j.jmp.2017.12.003> and Klauer, Hartmann, and Meyer-Grant
(submitted). The RT-MPT class not only incorporate frequencies like
traditional multinomial processing tree (MPT) models, but also latencies.
This enables it to estimate process completion times and encoding plus
motor execution times next to the process probabilities of traditional
MPTs. 'rtmpt' is a hierarchical Bayesian framework and posterior samples
are sampled using a Metropolis-within-Gibbs sampler (for exponential
RT-MPTs) or Hamiltonian-within-Gibbs sampler (for diffusion RT-MPTs).

%prep
%setup -q -c -n %{packname}

# fix end of executable files
find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
# prevent binary stripping
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
[ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \
  sed -i 's@-g0@@g' {} \; || true
# don't allow local prefix in executable scripts
find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;

%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
# remove buildroot from installed files
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;

%files
%{rlibdir}/%{packname}