%global __brp_check_rpaths %{nil}
%global __requires_exclude ^libmpi
%global packname  excessmort
%global packver   0.7.0
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          0.7.0
Release:          1%{?dist}%{?buildtag}
Summary:          Excess Mortality

License:          Artistic-2.0
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel >= 3.5.0
Requires:         R-core >= 3.5.0
BuildArch:        noarch
BuildRequires:    R-stats 
BuildRequires:    R-datasets 
BuildRequires:    R-CRAN-dplyr 
BuildRequires:    R-CRAN-tidyr 
BuildRequires:    R-CRAN-rlang 
BuildRequires:    R-CRAN-lubridate 
BuildRequires:    R-splines 
BuildRequires:    R-CRAN-ggplot2 
BuildRequires:    R-CRAN-scales 
Requires:         R-stats 
Requires:         R-datasets 
Requires:         R-CRAN-dplyr 
Requires:         R-CRAN-tidyr 
Requires:         R-CRAN-rlang 
Requires:         R-CRAN-lubridate 
Requires:         R-splines 
Requires:         R-CRAN-ggplot2 
Requires:         R-CRAN-scales 

%description
Implementation of method for estimating excess mortality and other health
related outcomes from weekly or daily count data described in Acosta and
Irizarry (2021) "A Flexible Statistical Framework for Estimating Excess
Mortality".

%prep
%setup -q -c -n %{packname}

# fix end of executable files
find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
# prevent binary stripping
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
[ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \
  sed -i 's@-g0@@g' {} \; || true
# don't allow local prefix in executable scripts
find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;

%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
# remove buildroot from installed files
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;

%files
%{rlibdir}/%{packname}