%global __brp_check_rpaths %{nil}
%global __requires_exclude ^libmpi
%global packname  EnrichIntersect
%global packver   0.7
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          0.7
Release:          1%{?dist}%{?buildtag}
Summary:          Enrichment Analysis and Intersecting Sankey Diagram

License:          MIT + file LICENSE
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel >= 4.0
Requires:         R-core >= 4.0
BuildArch:        noarch
BuildRequires:    R-CRAN-ggplot2 
BuildRequires:    R-CRAN-dplyr 
BuildRequires:    R-CRAN-networkD3 
BuildRequires:    R-CRAN-jsonlite 
BuildRequires:    R-CRAN-htmlwidgets 
BuildRequires:    R-CRAN-webshot2 
BuildRequires:    R-stats 
BuildRequires:    R-methods 
BuildRequires:    R-grDevices 
Requires:         R-CRAN-ggplot2 
Requires:         R-CRAN-dplyr 
Requires:         R-CRAN-networkD3 
Requires:         R-CRAN-jsonlite 
Requires:         R-CRAN-htmlwidgets 
Requires:         R-CRAN-webshot2 
Requires:         R-stats 
Requires:         R-methods 
Requires:         R-grDevices 

%description
A flexible tool for enrichment analysis based on user-defined sets. It
allows users to perform over-representation analysis of the custom sets
among any specified ranked feature list, hence making enrichment analysis
applicable to various types of data from different scientific fields.
'EnrichIntersect' also enables an interactive means to visualize
identified associations based on, for example, the mix-lasso model (Zhao
et al., 2022 <doi:10.1016/j.isci.2022.104767>) or similar methods.

%prep
%setup -q -c -n %{packname}

# fix end of executable files
find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
# prevent binary stripping
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
[ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \
  sed -i 's@-g0@@g' {} \; || true
# don't allow local prefix in executable scripts
find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;

%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
# remove buildroot from installed files
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;

%files
%{rlibdir}/%{packname}