%global __brp_check_rpaths %{nil}
%global __requires_exclude ^libmpi
%global packname  brisk
%global packver   0.1.0
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          0.1.0
Release:          1%{?dist}%{?buildtag}
Summary:          Bayesian Benefit Risk Analysis

License:          MIT + file LICENSE
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel
Requires:         R-core
BuildArch:        noarch
BuildRequires:    R-CRAN-ggplot2 >= 3.3
BuildRequires:    R-CRAN-tidyr >= 1.1
BuildRequires:    R-CRAN-dplyr >= 1.0
BuildRequires:    R-CRAN-rlang >= 1.0
BuildRequires:    R-CRAN-hitandrun >= 0.5
BuildRequires:    R-CRAN-ellipsis >= 0.3
BuildRequires:    R-CRAN-purrr >= 0.3
Requires:         R-CRAN-ggplot2 >= 3.3
Requires:         R-CRAN-tidyr >= 1.1
Requires:         R-CRAN-dplyr >= 1.0
Requires:         R-CRAN-rlang >= 1.0
Requires:         R-CRAN-hitandrun >= 0.5
Requires:         R-CRAN-ellipsis >= 0.3
Requires:         R-CRAN-purrr >= 0.3

%description
Quantitative methods for benefit-risk analysis help to condense complex
decisions into a univariate metric describing the overall benefit relative
to risk.  One approach is to use the multi-criteria decision analysis
framework (MCDA), as in Mussen, Salek, and Walker (2007)
<doi:10.1002/pds.1435>.  Bayesian benefit-risk analysis incorporates
uncertainty through posterior distributions which are inputs to the
benefit-risk framework.  The brisk package provides functions to assist
with Bayesian benefit-risk analyses, such as MCDA. Users input posterior
samples, utility functions, weights, and the package outputs quantitative
benefit-risk scores.  The posterior of the benefit-risk scores for each
group can be compared.  Some plotting capabilities are also included.

%prep
%setup -q -c -n %{packname}

# fix end of executable files
find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
# prevent binary stripping
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
[ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \
  sed -i 's@-g0@@g' {} \; || true
# don't allow local prefix in executable scripts
find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;

%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
# remove buildroot from installed files
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;

%files
%{rlibdir}/%{packname}