%global __brp_check_rpaths %{nil}
%global packname  phecodemap
%global packver   0.1.0
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          0.1.0
Release:          1%{?dist}%{?buildtag}
Summary:          Visualization for PheCode Mapping with ICD-9 and ICD-10-CM Codes

License:          GPL (>= 3)
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel >= 3.5.0
Requires:         R-core >= 3.5.0
BuildArch:        noarch
BuildRequires:    R-CRAN-shiny >= 1.6.0
BuildRequires:    R-CRAN-config >= 0.3.1
BuildRequires:    R-CRAN-golem >= 0.3.1
BuildRequires:    R-CRAN-shinyBS 
BuildRequires:    R-CRAN-collapsibleTree 
BuildRequires:    R-CRAN-dplyr 
BuildRequires:    R-CRAN-DT 
BuildRequires:    R-CRAN-plotly 
BuildRequires:    R-CRAN-purrr 
BuildRequires:    R-CRAN-readr 
BuildRequires:    R-CRAN-rintrojs 
BuildRequires:    R-CRAN-shinycssloaders 
BuildRequires:    R-CRAN-shinydashboard 
BuildRequires:    R-CRAN-shinydashboardPlus 
Requires:         R-CRAN-shiny >= 1.6.0
Requires:         R-CRAN-config >= 0.3.1
Requires:         R-CRAN-golem >= 0.3.1
Requires:         R-CRAN-shinyBS 
Requires:         R-CRAN-collapsibleTree 
Requires:         R-CRAN-dplyr 
Requires:         R-CRAN-DT 
Requires:         R-CRAN-plotly 
Requires:         R-CRAN-purrr 
Requires:         R-CRAN-readr 
Requires:         R-CRAN-rintrojs 
Requires:         R-CRAN-shinycssloaders 
Requires:         R-CRAN-shinydashboard 
Requires:         R-CRAN-shinydashboardPlus 

%description
To build a shiny app for visualization of the hierarchy of PheCode Mapping
with International Classification of Diseases (ICD). The same PheCode
hierarchy is displayed in two ways: as a sunburst plot and as a tree.

%prep
%setup -q -c -n %{packname}

# fix end of executable files
find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
# prevent binary stripping
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
[ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \
  sed -i 's@-g0@@g' {} \; || true
# don't allow local prefix in executable scripts
find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;

%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
# remove buildroot from installed files
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;

%files
%{rlibdir}/%{packname}