%global __brp_check_rpaths %{nil}
%global __requires_exclude ^libmpi
%global packname  amregtest
%global packver   1.0.3
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          1.0.3
Release:          1%{?dist}%{?buildtag}
Summary:          Runs Allelematch Regression Tests

License:          MIT + file LICENSE
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel >= 2.10
Requires:         R-core >= 2.10
BuildArch:        noarch
BuildRequires:    R-CRAN-testthat >= 3.0.0
BuildRequires:    R-CRAN-allelematch 
BuildRequires:    R-CRAN-digest 
BuildRequires:    R-CRAN-remotes 
BuildRequires:    R-utils 
BuildRequires:    R-CRAN-withr 
Requires:         R-CRAN-testthat >= 3.0.0
Requires:         R-CRAN-allelematch 
Requires:         R-CRAN-digest 
Requires:         R-CRAN-remotes 
Requires:         R-utils 
Requires:         R-CRAN-withr 

%description
Automates regression testing of package 'allelematch'. Over 2500 tests
covers all functions in 'allelematch', reproduces the examples from the
documentation and includes negative tests. The implementation is based on
'testthat'.

%prep
%setup -q -c -n %{packname}

# fix end of executable files
find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
# prevent binary stripping
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
[ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \
  sed -i 's@-g0@@g' {} \; || true
# don't allow local prefix in executable scripts
find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;

%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
# remove buildroot from installed files
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;

%files
%{rlibdir}/%{packname}