%global __brp_check_rpaths %{nil}
%global packname  eventglm
%global packver   1.2.2
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          1.2.2
Release:          1%{?dist}%{?buildtag}
Summary:          Regression Models for Event History Outcomes

License:          GPL-3
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel >= 2.10
Requires:         R-core >= 2.10
BuildRequires:    R-CRAN-survival 
BuildRequires:    R-CRAN-sandwich 
BuildRequires:    R-stats 
BuildRequires:    R-CRAN-geepack 
Requires:         R-CRAN-survival 
Requires:         R-CRAN-sandwich 
Requires:         R-stats 
Requires:         R-CRAN-geepack 

%description
A user friendly, easy to understand way of doing event history regression
for marginal estimands of interest, including the cumulative incidence and
the restricted mean survival, using the pseudo observation framework for
estimation. For a review of the methodology, see Andersen and Pohar Perme
(2010) <doi:10.1177/0962280209105020> or Sachs and Gabriel (2022)
<doi:10.18637/jss.v102.i09>. The interface uses the well known formulation
of a generalized linear model and allows for features including plotting
of residuals, the use of sampling weights, and corrected variance
estimation.

%prep
%setup -q -c -n %{packname}

# fix end of executable files
find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
# prevent binary stripping
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
[ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \
  sed -i 's@-g0@@g' {} \; || true
# don't allow local prefix in executable scripts
find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;

%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
# remove buildroot from installed files
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;

%files
%{rlibdir}/%{packname}