%global __brp_check_rpaths %{nil}
%global __requires_exclude ^libmpi
%global packname  MRTAnalysis
%global packver   0.1.2
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          0.1.2
Release:          1%{?dist}%{?buildtag}
Summary:          Primary and Secondary Analyses for Micro-Randomized Trials

License:          GPL-3
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel >= 4.2
Requires:         R-core >= 4.2
BuildArch:        noarch
BuildRequires:    R-CRAN-rootSolve 
BuildRequires:    R-stats 
BuildRequires:    R-CRAN-geepack 
BuildRequires:    R-CRAN-sandwich 
Requires:         R-CRAN-rootSolve 
Requires:         R-stats 
Requires:         R-CRAN-geepack 
Requires:         R-CRAN-sandwich 

%description
Estimates marginal causal excursion effects and moderated causal excursion
effects for micro-randomized trial (MRT). Applicable to MRT with binary
treatment options and continuous or binary outcomes. The method for MRT
with continuous outcomes is the weighted centered least squares (WCLS) by
Boruvka et al. (2018) <doi:10.1080/01621459.2017.1305274>. The method for
MRT with binary outcomes is the estimator for marginal excursion effect
(EMEE) by Qian et al. (2021) <doi:10.1093/biomet/asaa070>.

%prep
%setup -q -c -n %{packname}

# fix end of executable files
find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
# prevent binary stripping
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
[ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \
  sed -i 's@-g0@@g' {} \; || true
# don't allow local prefix in executable scripts
find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;

%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
# remove buildroot from installed files
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;

%files
%{rlibdir}/%{packname}