%global __brp_check_rpaths %{nil}
%global __requires_exclude ^libmpi
%global packname  reproducer
%global packver   0.5.3
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          0.5.3
Release:          1%{?dist}%{?buildtag}
Summary:          Reproduce Statistical Analyses and Meta-Analyses

License:          GPL (>= 2)
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel >= 3.5.0
Requires:         R-core >= 3.5.0
BuildArch:        noarch
BuildRequires:    R-CRAN-MASS >= 7.3.45
BuildRequires:    R-stats >= 3.5.0
BuildRequires:    R-CRAN-openxlsx >= 2.4.0
BuildRequires:    R-CRAN-tibble >= 2.1.1
BuildRequires:    R-CRAN-ggplot2 >= 2.0.0
BuildRequires:    R-CRAN-metafor >= 1.9.2
BuildRequires:    R-CRAN-xtable >= 1.7.4
BuildRequires:    R-CRAN-jsonlite >= 1.6
BuildRequires:    R-CRAN-httr >= 1.4.0
BuildRequires:    R-CRAN-stringr >= 1.4.0
BuildRequires:    R-CRAN-readr >= 1.3.1
BuildRequires:    R-CRAN-lme4 >= 1.1.10
BuildRequires:    R-CRAN-nortest >= 1.0.4
BuildRequires:    R-CRAN-gridExtra >= 0.9
BuildRequires:    R-CRAN-reshape >= 0.8.8
BuildRequires:    R-CRAN-tidyr >= 0.8.3
BuildRequires:    R-CRAN-dplyr >= 0.8.0.1
BuildRequires:    R-CRAN-GetoptLong >= 0.1.7
Requires:         R-CRAN-MASS >= 7.3.45
Requires:         R-stats >= 3.5.0
Requires:         R-CRAN-openxlsx >= 2.4.0
Requires:         R-CRAN-tibble >= 2.1.1
Requires:         R-CRAN-ggplot2 >= 2.0.0
Requires:         R-CRAN-metafor >= 1.9.2
Requires:         R-CRAN-xtable >= 1.7.4
Requires:         R-CRAN-jsonlite >= 1.6
Requires:         R-CRAN-httr >= 1.4.0
Requires:         R-CRAN-stringr >= 1.4.0
Requires:         R-CRAN-readr >= 1.3.1
Requires:         R-CRAN-lme4 >= 1.1.10
Requires:         R-CRAN-nortest >= 1.0.4
Requires:         R-CRAN-gridExtra >= 0.9
Requires:         R-CRAN-reshape >= 0.8.8
Requires:         R-CRAN-tidyr >= 0.8.3
Requires:         R-CRAN-dplyr >= 0.8.0.1
Requires:         R-CRAN-GetoptLong >= 0.1.7

%description
Includes data analysis and meta-analysis functions (e.g., to calculate
effect sizes and 95%% Confidence Intervals (CI) on Standardised Effect
Sizes (d) for AB/BA cross-over repeated-measures experimental designs),
data presentation functions (e.g., density curve overlaid on
histogram),and the data sets analyzed in different research papers in
software engineering (e.g., related to software defect prediction or
multi- site experiment concerning the extent to which structured abstracts
were clearer and more complete than conventional abstracts) to streamline
reproducible research in software engineering.

%prep
%setup -q -c -n %{packname}

# fix end of executable files
find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
# prevent binary stripping
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
[ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \
  sed -i 's@-g0@@g' {} \; || true
# don't allow local prefix in executable scripts
find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;

%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
# remove buildroot from installed files
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;

%files
%{rlibdir}/%{packname}