%global __brp_check_rpaths %{nil}
%global packname  bmemLavaan
%global packver   0.5
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          0.5
Release:          1%{?dist}%{?buildtag}
Summary:          Mediation Analysis with Missing Data and Non-Normal Data

License:          GPL-2
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel >= 3.5.0
Requires:         R-core >= 3.5.0
BuildArch:        noarch
BuildRequires:    R-CRAN-Amelia 
BuildRequires:    R-CRAN-MASS 
BuildRequires:    R-CRAN-snowfall 
BuildRequires:    R-CRAN-rsem 
BuildRequires:    R-CRAN-lavaan 
BuildRequires:    R-CRAN-sem 
Requires:         R-CRAN-Amelia 
Requires:         R-CRAN-MASS 
Requires:         R-CRAN-snowfall 
Requires:         R-CRAN-rsem 
Requires:         R-CRAN-lavaan 
Requires:         R-CRAN-sem 

%description
Methods for mediation analysis with missing data and non-normal data are
implemented. For missing data, four methods are available: Listwise
deletion, Pairwise deletion, Multiple imputation, and Two Stage Maximum
Likelihood algorithm. For MI and TS-ML, auxiliary variables can be
included to handle missing data. For handling non-normal data, bootstrap
and two-stage robust methods can be used. Technical details of the methods
can be found in Zhang and Wang (2013, <doi:10.1007/s11336-012-9301-5>),
Zhang (2014, <doi:10.3758/s13428-013-0424-0>), and Yuan and Zhang (2012,
<doi:10.1007/s11336-012-9282-4>).

%prep
%setup -q -c -n %{packname}

# fix end of executable files
find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
# prevent binary stripping
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
[ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \
  sed -i 's@-g0@@g' {} \; || true
# don't allow local prefix in executable scripts
find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;

%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
# remove buildroot from installed files
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;

%files
%{rlibdir}/%{packname}