%global __brp_check_rpaths %{nil}
%global packname  hJAM
%global packver   1.0.0
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          1.0.0
Release:          3%{?dist}%{?buildtag}
Summary:          Hierarchical Joint Analysis of Marginal Summary Statistics

License:          MIT + file LICENSE
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel
Requires:         R-core
BuildArch:        noarch
BuildRequires:    R-CRAN-ggplot2 
BuildRequires:    R-CRAN-ggpubr 
BuildRequires:    R-CRAN-dplyr 
BuildRequires:    R-CRAN-reshape2 
Requires:         R-CRAN-ggplot2 
Requires:         R-CRAN-ggpubr 
Requires:         R-CRAN-dplyr 
Requires:         R-CRAN-reshape2 

%description
Provides functions to implement a hierarchical approach which is designed
to perform joint analysis of summary statistics using the framework of
Mendelian Randomization or transcriptome analysis. Reference: Lai Jiang,
Shujing Xu, Nicholas Mancuso, Paul J. Newcombe, David V. Conti (2020). "A
Hierarchical Approach Using Marginal Summary Statistics for Multiple
Intermediates in a Mendelian Randomization or Transcriptome Analysis."
<bioRxiv><doi:10.1101/2020.02.03.924241>.

%prep
%setup -q -c -n %{packname}

find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;

%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}

test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css

%files
%{rlibdir}/%{packname}