%global __brp_check_rpaths %{nil}
%global __requires_exclude ^libmpi
%global packname  cdmTools
%global packver   1.0.5
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          1.0.5
Release:          1%{?dist}%{?buildtag}
Summary:          Useful Tools for Cognitive Diagnosis Modeling

License:          GPL-3
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel >= 3.6.0
Requires:         R-core >= 3.6.0
BuildArch:        noarch
BuildRequires:    R-CRAN-sirt >= 3.9.4
BuildRequires:    R-parallel >= 3.6.3
BuildRequires:    R-stats >= 3.6.3
BuildRequires:    R-CRAN-ggplot2 >= 3.3.0
BuildRequires:    R-CRAN-GPArotation >= 2014.11.1
BuildRequires:    R-CRAN-GDINA >= 2.8.0
BuildRequires:    R-CRAN-psych >= 1.9.12
BuildRequires:    R-CRAN-combinat >= 0.0.8
BuildRequires:    R-CRAN-fungible 
BuildRequires:    R-CRAN-foreach 
BuildRequires:    R-CRAN-doSNOW 
Requires:         R-CRAN-sirt >= 3.9.4
Requires:         R-parallel >= 3.6.3
Requires:         R-stats >= 3.6.3
Requires:         R-CRAN-ggplot2 >= 3.3.0
Requires:         R-CRAN-GPArotation >= 2014.11.1
Requires:         R-CRAN-GDINA >= 2.8.0
Requires:         R-CRAN-psych >= 1.9.12
Requires:         R-CRAN-combinat >= 0.0.8
Requires:         R-CRAN-fungible 
Requires:         R-CRAN-foreach 
Requires:         R-CRAN-doSNOW 

%description
Provides useful tools for cognitive diagnosis modeling (CDM). The package
includes functions for empirical Q-matrix estimation and validation, such
as the Hull method (Nájera, Sorrel, de la Torre, & Abad, 2021,
<doi:10.1111/bmsp.12228>) and the discrete factor loading method (Wang,
Song, & Ding, 2018, <doi:10.1007/978-3-319-77249-3_29>). It also contains
dimensionality assessment procedures for CDM, including parallel analysis
and automated fit comparison as explored in Nájera, Abad, and Sorrel
(2021, <doi:10.3389/fpsyg.2021.614470>). Other relevant methods and
features for CDM applications, such as the restricted DINA model (Nájera
et al., 2023; <doi:10.3102/10769986231158829>), the general nonparametric
classification method (Chiu et al., 2018;
<doi:10.1007/s11336-017-9595-4>), and corrected estimation of the
classification accuracy via multiple imputation (Kreitchmann et al., 2022;
<doi:10.3758/s13428-022-01967-5>) are also available. Lastly, the package
provides some useful functions for CDM simulation studies, such as random
Q-matrix generation and detection of complete/identified Q-matrices.

%prep
%setup -q -c -n %{packname}

# fix end of executable files
find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
# prevent binary stripping
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
[ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \
  sed -i 's@-g0@@g' {} \; || true
# don't allow local prefix in executable scripts
find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;

%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
# remove buildroot from installed files
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;

%files
%{rlibdir}/%{packname}