%global __brp_check_rpaths %{nil}
%global __requires_exclude ^libmpi
%global packname  SteppedPower
%global packver   0.3.5
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          0.3.5
Release:          1%{?dist}%{?buildtag}
Summary:          Power Calculation for Stepped Wedge Designs

License:          MIT + file LICENSE
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel
Requires:         R-core
BuildArch:        noarch
BuildRequires:    R-CRAN-Matrix 
BuildRequires:    R-CRAN-plotly 
BuildRequires:    R-CRAN-Rfast 
BuildRequires:    R-grDevices 
BuildRequires:    R-stats 
BuildRequires:    R-utils 
Requires:         R-CRAN-Matrix 
Requires:         R-CRAN-plotly 
Requires:         R-CRAN-Rfast 
Requires:         R-grDevices 
Requires:         R-stats 
Requires:         R-utils 

%description
Tools for power and sample size calculation as well as design diagnostics
for longitudinal mixed model settings, with a focus on stepped wedge
designs. All calculations are oracle estimates i.e. assume random effect
variances to be known (or guessed) in advance. The method is introduced in
Hussey and Hughes (2007) <doi:10.1016/j.cct.2006.05.007>, extensions are
discussed in Li et al. (2020) <doi:10.1177/0962280220932962>.

%prep
%setup -q -c -n %{packname}

# fix end of executable files
find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
# prevent binary stripping
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
[ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \
  sed -i 's@-g0@@g' {} \; || true
# don't allow local prefix in executable scripts
find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;

%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
# remove buildroot from installed files
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;

%files
%{rlibdir}/%{packname}