Warning: Permanently added '2620:52:3:1:dead:beef:cafe:c108' (ED25519) to the list of known hosts.

You can reproduce this build on your computer by running:

  sudo dnf install copr-rpmbuild
  /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/7435327-fedora-40-x86_64 --chroot fedora-40-x86_64


Version: 0.72
PID: 12403
Logging PID: 12404
Task:
{'allow_user_ssh': False,
 'appstream': False,
 'background': False,
 'bootstrap': 'off',
 'build_id': 7435327,
 'buildroot_pkgs': [],
 'chroot': 'fedora-40-x86_64',
 'enable_net': False,
 'fedora_review': False,
 'git_hash': 'b95919e5abf7fa7e26b32563bd7e71dd7ec7910f',
 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/iucar/cran/R-CRAN-Seurat',
 'isolation': 'default',
 'memory_reqs': 2048,
 'package_name': 'R-CRAN-Seurat',
 'package_version': '5.1.0-1.copr7435327',
 'project_dirname': 'cran',
 'project_name': 'cran',
 'project_owner': 'iucar',
 'repo_priority': None,
 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/iucar/cran/fedora-40-x86_64/',
            'id': 'copr_base',
            'name': 'Copr repository',
            'priority': None}],
 'sandbox': 'iucar/cran--iucar',
 'source_json': {},
 'source_type': None,
 'ssh_public_keys': None,
 'submitter': 'iucar',
 'tags': [],
 'task_id': '7435327-fedora-40-x86_64',
 'timeout': 18000,
 'uses_devel_repo': False,
 'with_opts': [],
 'without_opts': []}

Running: git clone https://copr-dist-git.fedorainfracloud.org/git/iucar/cran/R-CRAN-Seurat /var/lib/copr-rpmbuild/workspace/workdir-4bc7g17b/R-CRAN-Seurat --depth 500 --no-single-branch --recursive

cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/iucar/cran/R-CRAN-Seurat', '/var/lib/copr-rpmbuild/workspace/workdir-4bc7g17b/R-CRAN-Seurat', '--depth', '500', '--no-single-branch', '--recursive']
cwd: .
rc: 0
stdout: 
stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-4bc7g17b/R-CRAN-Seurat'...

Running: git checkout b95919e5abf7fa7e26b32563bd7e71dd7ec7910f --

cmd: ['git', 'checkout', 'b95919e5abf7fa7e26b32563bd7e71dd7ec7910f', '--']
cwd: /var/lib/copr-rpmbuild/workspace/workdir-4bc7g17b/R-CRAN-Seurat
rc: 0
stdout: 
stderr: Note: switching to 'b95919e5abf7fa7e26b32563bd7e71dd7ec7910f'.

You are in 'detached HEAD' state. You can look around, make experimental
changes and commit them, and you can discard any commits you make in this
state without impacting any branches by switching back to a branch.

If you want to create a new branch to retain commits you create, you may
do so (now or later) by using -c with the switch command. Example:

  git switch -c <new-branch-name>

Or undo this operation with:

  git switch -

Turn off this advice by setting config variable advice.detachedHead to false

HEAD is now at b95919e automatic import of R-CRAN-Seurat

Running: copr-distgit-client sources

cmd: ['copr-distgit-client', 'sources']
cwd: /var/lib/copr-rpmbuild/workspace/workdir-4bc7g17b/R-CRAN-Seurat
rc: 0
stdout: 
stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD
INFO: Reading stdout from command: git rev-parse HEAD
INFO: Reading sources specification file: sources
INFO: Downloading Seurat_5.1.0.tar.gz
INFO: Reading stdout from command: curl --help all
INFO: Calling: curl -H Pragma: -o Seurat_5.1.0.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/iucar/cran/R-CRAN-Seurat/Seurat_5.1.0.tar.gz/md5/f0f8ead2778e97d7c06bac7eb6276115/Seurat_5.1.0.tar.gz
  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed
100 2015k  100 2015k    0     0  18.9M      0 --:--:-- --:--:-- --:--:-- 19.1M
INFO: Reading stdout from command: md5sum Seurat_5.1.0.tar.gz

/usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated
Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-4bc7g17b/R-CRAN-Seurat/R-CRAN-Seurat.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-4bc7g17b/R-CRAN-Seurat --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1715391297.000742 -r /var/lib/copr-rpmbuild/results/configs/child.cfg
INFO: mock.py version 5.5 starting (python version = 3.12.1, NVR = mock-5.5-1.fc39), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-4bc7g17b/R-CRAN-Seurat/R-CRAN-Seurat.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-4bc7g17b/R-CRAN-Seurat --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1715391297.000742 -r /var/lib/copr-rpmbuild/results/configs/child.cfg
Start: init plugins
INFO: tmpfs initialized
INFO: selinux enabled
INFO: chroot_scan: initialized
INFO: compress_logs: initialized
Finish: init plugins
INFO: Signal handler active
Start: run
INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-4bc7g17b/R-CRAN-Seurat/R-CRAN-Seurat.spec)  Config(fedora-40-x86_64)
Start: clean chroot
Finish: clean chroot
Mock Version: 5.5
INFO: Mock Version: 5.5
Start: chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-40-x86_64-1715391297.000742/root.
INFO: calling preinit hooks
INFO: enabled root cache
INFO: enabled package manager cache
Start: cleaning package manager metadata
Finish: cleaning package manager metadata
INFO: enabled HW Info plugin
INFO: Package manager dnf5 detected and used (fallback)
INFO: Buildroot is handled by package management from host and used with --installroot:
  rpm-4.19.1.1-1.fc39.x86_64
  rpm-sequoia-1.6.0-1.fc39.x86_64
  python3-dnf-4.19.2-1.fc39.noarch
  python3-dnf-plugins-core-4.6.0-1.fc39.noarch
  yum-4.19.2-1.fc39.noarch
  dnf5-5.1.17-1.fc39.x86_64
  dnf5-plugins-5.1.17-1.fc39.x86_64
Start: installing minimal buildroot with dnf5
Updating and loading repositories:
 updates                                100% |   6.3 MiB/s |   5.8 MiB |  00m01s
 fedora                                 100% | 701.4 KiB/s |  20.8 MiB |  00m30s
 Copr repository                        100% |  49.4 MiB/s |  11.8 MiB |  00m00s
Repositories loaded.
Package                           Arch   Version                    Repository      Size
Installing group/module packages:                                                       
 bash                             x86_64 5.2.26-3.fc40              fedora       8.1 MiB
 bzip2                            x86_64 1.0.8-18.fc40              fedora      91.7 KiB
 coreutils                        x86_64 9.4-6.fc40                 fedora       5.8 MiB
 cpio                             x86_64 2.15-1.fc40                fedora       1.1 MiB
 diffutils                        x86_64 3.10-5.fc40                fedora       1.6 MiB
 fedora-release-common            noarch 40-39                      updates     19.1 KiB
 findutils                        x86_64 1:4.9.0-8.fc40             fedora       1.5 MiB
 gawk                             x86_64 5.3.0-3.fc40               fedora       1.7 MiB
 glibc-minimal-langpack           x86_64 2.39-8.fc40                updates      0.0   B
 grep                             x86_64 3.11-7.fc40                fedora       1.0 MiB
 gzip                             x86_64 1.13-1.fc40                fedora     385.0 KiB
 info                             x86_64 7.1-2.fc40                 fedora     357.8 KiB
 patch                            x86_64 2.7.6-24.fc40              fedora     262.8 KiB
 redhat-rpm-config                noarch 286-1.fc40                 fedora     185.2 KiB
 rpm-build                        x86_64 4.19.1.1-1.fc40            fedora     173.7 KiB
 sed                              x86_64 4.9-1.fc40                 fedora     861.5 KiB
 shadow-utils                     x86_64 2:4.15.1-2.fc40            updates      4.1 MiB
 tar                              x86_64 2:1.35-3.fc40              fedora       2.9 MiB
 unzip                            x86_64 6.0-63.fc40                fedora     382.8 KiB
 util-linux                       x86_64 2.40.1-1.fc40              updates      3.7 MiB
 which                            x86_64 2.21-41.fc40               fedora      80.2 KiB
 xz                               x86_64 1:5.4.6-3.fc40             fedora       2.0 MiB
Installing dependencies:                                                                
 alternatives                     x86_64 1.26-3.fc40                fedora      62.3 KiB
 ansible-srpm-macros              noarch 1-14.fc40                  fedora      35.7 KiB
 audit-libs                       x86_64 4.0.1-1.fc40               fedora     327.3 KiB
 authselect                       x86_64 1.5.0-5.fc40               fedora     153.6 KiB
 authselect-libs                  x86_64 1.5.0-5.fc40               fedora     818.3 KiB
 basesystem                       noarch 11-20.fc40                 fedora       0.0   B
 binutils                         x86_64 2.41-34.fc40               fedora      26.4 MiB
 binutils-gold                    x86_64 2.41-34.fc40               fedora       2.0 MiB
 bzip2-libs                       x86_64 1.0.8-18.fc40              fedora      80.7 KiB
 ca-certificates                  noarch 2023.2.62_v7.0.401-6.fc40  fedora       2.3 MiB
 coreutils-common                 x86_64 9.4-6.fc40                 fedora      11.4 MiB
 cracklib                         x86_64 2.9.11-5.fc40              fedora     238.9 KiB
 crypto-policies                  noarch 20240201-2.git9f501f3.fc40 fedora     149.3 KiB
 curl                             x86_64 8.6.0-8.fc40               updates    734.6 KiB
 cyrus-sasl-lib                   x86_64 2.1.28-19.fc40             fedora       2.3 MiB
 debugedit                        x86_64 5.0-14.fc40                fedora     199.0 KiB
 dwz                              x86_64 0.15-6.fc40                fedora     290.9 KiB
 ed                               x86_64 1.20.2-1.fc40              updates    146.9 KiB
 efi-srpm-macros                  noarch 5-11.fc40                  fedora      40.1 KiB
 elfutils                         x86_64 0.191-4.fc40               fedora       2.5 MiB
 elfutils-debuginfod-client       x86_64 0.191-4.fc40               fedora      64.9 KiB
 elfutils-default-yama-scope      noarch 0.191-4.fc40               fedora       1.8 KiB
 elfutils-libelf                  x86_64 0.191-4.fc40               fedora       1.2 MiB
 elfutils-libs                    x86_64 0.191-4.fc40               fedora     646.1 KiB
 fedora-gpg-keys                  noarch 40-1                       fedora     125.0 KiB
 fedora-release                   noarch 40-39                      updates      0.0   B
 fedora-release-identity-basic    noarch 40-39                      updates    654.0   B
 fedora-repos                     noarch 40-1                       fedora       4.9 KiB
 file                             x86_64 5.45-4.fc40                fedora     103.5 KiB
 file-libs                        x86_64 5.45-4.fc40                fedora       9.9 MiB
 filesystem                       x86_64 3.18-8.fc40                fedora     106.0   B
 fonts-srpm-macros                noarch 1:2.0.5-14.fc40            fedora      55.3 KiB
 forge-srpm-macros                noarch 0.3.1-1.fc40               updates     39.0 KiB
 fpc-srpm-macros                  noarch 1.3-12.fc40                fedora     144.0   B
 gdb-minimal                      x86_64 14.2-1.fc40                fedora      12.7 MiB
 gdbm                             x86_64 1:1.23-6.fc40              fedora     460.9 KiB
 gdbm-libs                        x86_64 1:1.23-6.fc40              fedora     121.9 KiB
 ghc-srpm-macros                  noarch 1.9-1.fc40                 fedora     716.0   B
 glibc                            x86_64 2.39-8.fc40                updates      6.7 MiB
 glibc-common                     x86_64 2.39-8.fc40                updates      1.0 MiB
 glibc-gconv-extra                x86_64 2.39-8.fc40                updates      7.8 MiB
 gmp                              x86_64 1:6.2.1-8.fc40             fedora     794.6 KiB
 gnat-srpm-macros                 noarch 6-5.fc40                   fedora       1.0 KiB
 go-srpm-macros                   noarch 3.5.0-1.fc40               fedora      60.6 KiB
 jansson                          x86_64 2.13.1-9.fc40              fedora      88.3 KiB
 kernel-srpm-macros               noarch 1.0-23.fc40                fedora       1.9 KiB
 keyutils-libs                    x86_64 1.6.3-3.fc40               fedora      54.4 KiB
 krb5-libs                        x86_64 1.21.2-5.fc40              fedora       2.3 MiB
 libacl                           x86_64 2.3.2-1.fc40               fedora      40.0 KiB
 libarchive                       x86_64 3.7.2-3.fc40               fedora     914.6 KiB
 libattr                          x86_64 2.5.2-3.fc40               fedora      28.5 KiB
 libblkid                         x86_64 2.40.1-1.fc40              updates    258.5 KiB
 libbrotli                        x86_64 1.1.0-3.fc40               fedora     829.5 KiB
 libcap                           x86_64 2.69-8.fc40                updates    219.8 KiB
 libcap-ng                        x86_64 0.8.4-4.fc40               fedora      73.1 KiB
 libcom_err                       x86_64 1.47.0-5.fc40              fedora      67.2 KiB
 libcurl                          x86_64 8.6.0-8.fc40               updates    772.8 KiB
 libeconf                         x86_64 0.6.2-1.fc40               fedora      58.0 KiB
 libevent                         x86_64 2.1.12-12.fc40             fedora     895.6 KiB
 libfdisk                         x86_64 2.40.1-1.fc40              updates    362.9 KiB
 libffi                           x86_64 3.4.4-7.fc40               fedora      81.6 KiB
 libgcc                           x86_64 14.0.1-0.15.fc40           fedora     270.6 KiB
 libgomp                          x86_64 14.0.1-0.15.fc40           fedora     519.4 KiB
 libidn2                          x86_64 2.3.7-1.fc40               fedora     329.1 KiB
 libmount                         x86_64 2.40.1-1.fc40              updates    351.8 KiB
 libnghttp2                       x86_64 1.59.0-3.fc40              updates    166.1 KiB
 libnsl2                          x86_64 2.0.1-1.fc40               fedora      57.9 KiB
 libpkgconf                       x86_64 2.1.0-1.fc40               fedora      74.2 KiB
 libpsl                           x86_64 0.21.5-3.fc40              fedora      80.5 KiB
 libpwquality                     x86_64 1.4.5-9.fc40               fedora     417.8 KiB
 libselinux                       x86_64 3.6-4.fc40                 fedora     173.0 KiB
 libsemanage                      x86_64 3.6-3.fc40                 fedora     293.5 KiB
 libsepol                         x86_64 3.6-3.fc40                 fedora     802.0 KiB
 libsmartcols                     x86_64 2.40.1-1.fc40              updates    180.4 KiB
 libssh                           x86_64 0.10.6-5.fc40              fedora     509.3 KiB
 libssh-config                    noarch 0.10.6-5.fc40              fedora     277.0   B
 libstdc++                        x86_64 14.0.1-0.15.fc40           fedora       2.8 MiB
 libtasn1                         x86_64 4.19.0-6.fc40              fedora     175.7 KiB
 libtirpc                         x86_64 1.3.4-1.rc3.fc40           fedora     202.8 KiB
 libtool-ltdl                     x86_64 2.4.7-10.fc40              fedora      66.2 KiB
 libunistring                     x86_64 1.1-7.fc40                 fedora       1.7 MiB
 libutempter                      x86_64 1.2.1-13.fc40              fedora      57.7 KiB
 libuuid                          x86_64 2.40.1-1.fc40              updates     37.4 KiB
 libverto                         x86_64 0.3.2-8.fc40               fedora      29.5 KiB
 libxcrypt                        x86_64 4.4.36-5.fc40              fedora     262.8 KiB
 libxml2                          x86_64 2.12.6-1.fc40              updates      1.7 MiB
 libzstd                          x86_64 1.5.6-1.fc40               updates    787.9 KiB
 lua-libs                         x86_64 5.4.6-5.fc40               fedora     281.1 KiB
 lua-srpm-macros                  noarch 1-13.fc40                  fedora       1.3 KiB
 lz4-libs                         x86_64 1.9.4-6.fc40               fedora     129.4 KiB
 mpfr                             x86_64 4.2.1-3.fc40               fedora     832.0 KiB
 ncurses-base                     noarch 6.4-12.20240127.fc40       fedora     326.2 KiB
 ncurses-libs                     x86_64 6.4-12.20240127.fc40       fedora     963.2 KiB
 ocaml-srpm-macros                noarch 9-3.fc40                   fedora       1.9 KiB
 openblas-srpm-macros             noarch 2-16.fc40                  fedora     104.0   B
 openldap                         x86_64 2.6.7-1.fc40               fedora     635.1 KiB
 openssl-libs                     x86_64 1:3.2.1-2.fc40             fedora       7.8 MiB
 p11-kit                          x86_64 0.25.3-4.fc40              fedora       2.2 MiB
 p11-kit-trust                    x86_64 0.25.3-4.fc40              fedora     391.4 KiB
 package-notes-srpm-macros        noarch 0.5-11.fc40                fedora       1.6 KiB
 pam                              x86_64 1.6.0-2.fc40               fedora       1.8 MiB
 pam-libs                         x86_64 1.6.0-2.fc40               fedora     135.0 KiB
 pcre2                            x86_64 10.42-2.fc40.2             fedora     637.6 KiB
 pcre2-syntax                     noarch 10.42-2.fc40.2             fedora     235.1 KiB
 perl-srpm-macros                 noarch 1-53.fc40                  fedora     861.0   B
 pkgconf                          x86_64 2.1.0-1.fc40               fedora      82.4 KiB
 pkgconf-m4                       noarch 2.1.0-1.fc40               fedora      13.9 KiB
 pkgconf-pkg-config               x86_64 2.1.0-1.fc40               fedora     989.0   B
 popt                             x86_64 1.19-6.fc40                fedora     136.9 KiB
 publicsuffix-list-dafsa          noarch 20240107-3.fc40            fedora      67.5 KiB
 pyproject-srpm-macros            noarch 1.12.0-1.fc40              fedora       1.5 KiB
 python-srpm-macros               noarch 3.12-7.fc40                fedora      50.1 KiB
 qt5-srpm-macros                  noarch 5.15.13-1.fc40             fedora     492.0   B
 qt6-srpm-macros                  noarch 6.7.0-1.fc40               updates    456.0   B
 readline                         x86_64 8.2-8.fc40                 fedora     489.2 KiB
 rpm                              x86_64 4.19.1.1-1.fc40            fedora       3.0 MiB
 rpm-build-libs                   x86_64 4.19.1.1-1.fc40            fedora     198.4 KiB
 rpm-libs                         x86_64 4.19.1.1-1.fc40            fedora     709.9 KiB
 rpm-sequoia                      x86_64 1.6.0-2.fc40               fedora       2.2 MiB
 rust-srpm-macros                 noarch 26.2-1.fc40                fedora       4.8 KiB
 setup                            noarch 2.14.5-2.fc40              fedora     720.4 KiB
 sqlite-libs                      x86_64 3.45.1-2.fc40              fedora       1.4 MiB
 systemd-libs                     x86_64 255.4-1.fc40               fedora       1.9 MiB
 util-linux-core                  x86_64 2.40.1-1.fc40              updates      1.5 MiB
 xxhash-libs                      x86_64 0.8.2-2.fc40               fedora      88.5 KiB
 xz-libs                          x86_64 1:5.4.6-3.fc40             fedora     209.8 KiB
 zig-srpm-macros                  noarch 1-2.fc40                   fedora       1.1 KiB
 zip                              x86_64 3.0-40.fc40                fedora     703.2 KiB
 zlib-ng-compat                   x86_64 2.1.6-2.fc40               fedora     134.0 KiB
 zstd                             x86_64 1.5.6-1.fc40               updates      1.7 MiB
Installing groups:                                                                      
 Buildsystem building group                                                             

Transaction Summary:
 Installing:      152 packages

Total size of inbound packages is 53 MiB. Need to download 53 MiB.
After this operation 178 MiB will be used (install 178 MiB, remove 0 B).
[  1/152] bzip2-0:1.0.8-18.fc40.x86_64  100% | 758.8 KiB/s |  52.4 KiB |  00m00s
[  2/152] cpio-0:2.15-1.fc40.x86_64     100% |   5.2 MiB/s | 292.2 KiB |  00m00s
[  3/152] coreutils-0:9.4-6.fc40.x86_64 100% |   8.1 MiB/s |   1.1 MiB |  00m00s
[  4/152] bash-0:5.2.26-3.fc40.x86_64   100% |  11.9 MiB/s |   1.8 MiB |  00m00s
[  5/152] diffutils-0:3.10-5.fc40.x86_6 100% |  11.6 MiB/s | 405.6 KiB |  00m00s
[  6/152] findutils-1:4.9.0-8.fc40.x86_ 100% |  22.9 MiB/s | 492.0 KiB |  00m00s
[  7/152] grep-0:3.11-7.fc40.x86_64     100% |  15.4 MiB/s | 300.2 KiB |  00m00s
[  8/152] gzip-0:1.13-1.fc40.x86_64     100% |   9.3 MiB/s | 170.6 KiB |  00m00s
[  9/152] info-0:7.1-2.fc40.x86_64      100% |  10.5 MiB/s | 182.3 KiB |  00m00s
[ 10/152] patch-0:2.7.6-24.fc40.x86_64  100% |   7.5 MiB/s | 130.7 KiB |  00m00s
[ 11/152] redhat-rpm-config-0:286-1.fc4 100% |   4.8 MiB/s |  83.0 KiB |  00m00s
[ 12/152] rpm-build-0:4.19.1.1-1.fc40.x 100% |   4.8 MiB/s |  78.2 KiB |  00m00s
[ 13/152] sed-0:4.9-1.fc40.x86_64       100% |  16.4 MiB/s | 318.2 KiB |  00m00s
[ 14/152] unzip-0:6.0-63.fc40.x86_64    100% |  10.0 MiB/s | 184.5 KiB |  00m00s
[ 15/152] which-0:2.21-41.fc40.x86_64   100% |   2.5 MiB/s |  41.4 KiB |  00m00s
[ 16/152] tar-2:1.35-3.fc40.x86_64      100% |  24.6 MiB/s | 856.6 KiB |  00m00s
[ 17/152] xz-1:5.4.6-3.fc40.x86_64      100% |  25.9 MiB/s | 557.4 KiB |  00m00s
[ 18/152] gawk-0:5.3.0-3.fc40.x86_64    100% |  41.2 MiB/s |   1.1 MiB |  00m00s
[ 19/152] fedora-release-common-0:40-39 100% |  91.4 KiB/s |  21.3 KiB |  00m00s
[ 20/152] glibc-minimal-langpack-0:2.39 100% | 292.6 KiB/s | 101.2 KiB |  00m00s
[ 21/152] filesystem-0:3.18-8.fc40.x86_ 100% |  32.9 MiB/s |   1.1 MiB |  00m00s
[ 22/152] ncurses-libs-0:6.4-12.2024012 100% |  15.5 MiB/s | 332.5 KiB |  00m00s
[ 23/152] bzip2-libs-0:1.0.8-18.fc40.x8 100% |   2.5 MiB/s |  40.9 KiB |  00m00s
[ 24/152] coreutils-common-0:9.4-6.fc40 100% |  39.8 MiB/s |   2.2 MiB |  00m00s
[ 25/152] gmp-1:6.2.1-8.fc40.x86_64     100% |  16.1 MiB/s | 312.5 KiB |  00m00s
[ 26/152] util-linux-0:2.40.1-1.fc40.x8 100% |   4.2 MiB/s |   1.2 MiB |  00m00s
[ 27/152] libacl-0:2.3.2-1.fc40.x86_64  100% |   1.4 MiB/s |  24.4 KiB |  00m00s
[ 28/152] libattr-0:2.5.2-3.fc40.x86_64 100% |   1.1 MiB/s |  18.0 KiB |  00m00s
[ 29/152] libselinux-0:3.6-4.fc40.x86_6 100% |   5.0 MiB/s |  87.5 KiB |  00m00s
[ 30/152] shadow-utils-2:4.15.1-2.fc40. 100% |   2.5 MiB/s |   1.3 MiB |  00m01s
[ 31/152] pcre2-0:10.42-2.fc40.2.x86_64 100% |  10.0 MiB/s | 235.8 KiB |  00m00s
[ 32/152] ansible-srpm-macros-0:1-14.fc 100% |   1.1 MiB/s |  20.8 KiB |  00m00s
[ 33/152] openssl-libs-1:3.2.1-2.fc40.x 100% |  51.2 MiB/s |   2.3 MiB |  00m00s
[ 34/152] dwz-0:0.15-6.fc40.x86_64      100% |   6.4 MiB/s | 137.8 KiB |  00m00s
[ 35/152] efi-srpm-macros-0:5-11.fc40.n 100% |   1.4 MiB/s |  22.3 KiB |  00m00s
[ 36/152] file-0:5.45-4.fc40.x86_64     100% |   3.0 MiB/s |  49.0 KiB |  00m00s
[ 37/152] fonts-srpm-macros-1:2.0.5-14. 100% |   1.6 MiB/s |  26.5 KiB |  00m00s
[ 38/152] fpc-srpm-macros-0:1.3-12.fc40 100% | 489.6 KiB/s |   7.8 KiB |  00m00s
[ 39/152] ghc-srpm-macros-0:1.9-1.fc40. 100% | 546.8 KiB/s |   8.7 KiB |  00m00s
[ 40/152] gnat-srpm-macros-0:6-5.fc40.n 100% | 551.5 KiB/s |   8.8 KiB |  00m00s
[ 41/152] go-srpm-macros-0:3.5.0-1.fc40 100% |   1.7 MiB/s |  27.5 KiB |  00m00s
[ 42/152] kernel-srpm-macros-0:1.0-23.f 100% | 608.0 KiB/s |   9.7 KiB |  00m00s
[ 43/152] lua-srpm-macros-0:1-13.fc40.n 100% | 545.7 KiB/s |   8.7 KiB |  00m00s
[ 44/152] ocaml-srpm-macros-0:9-3.fc40. 100% | 567.1 KiB/s |   9.1 KiB |  00m00s
[ 45/152] openblas-srpm-macros-0:2-16.f 100% | 468.8 KiB/s |   7.5 KiB |  00m00s
[ 46/152] package-notes-srpm-macros-0:0 100% | 621.5 KiB/s |   9.9 KiB |  00m00s
[ 47/152] perl-srpm-macros-0:1-53.fc40. 100% | 523.9 KiB/s |   8.4 KiB |  00m00s
[ 48/152] pyproject-srpm-macros-0:1.12. 100% | 851.8 KiB/s |  13.6 KiB |  00m00s
[ 49/152] python-srpm-macros-0:3.12-7.f 100% |   1.5 MiB/s |  23.8 KiB |  00m00s
[ 50/152] qt5-srpm-macros-0:5.15.13-1.f 100% | 530.6 KiB/s |   8.5 KiB |  00m00s
[ 51/152] rust-srpm-macros-0:26.2-1.fc4 100% | 785.2 KiB/s |  12.6 KiB |  00m00s
[ 52/152] rpm-0:4.19.1.1-1.fc40.x86_64  100% |  25.1 MiB/s | 540.1 KiB |  00m00s
[ 53/152] zig-srpm-macros-0:1-2.fc40.no 100% | 502.4 KiB/s |   8.0 KiB |  00m00s
[ 54/152] zip-0:3.0-40.fc40.x86_64      100% |  12.9 MiB/s | 264.8 KiB |  00m00s
[ 55/152] debugedit-0:5.0-14.fc40.x86_6 100% |   4.5 MiB/s |  78.7 KiB |  00m00s
[ 56/152] popt-0:1.19-6.fc40.x86_64     100% |   3.8 MiB/s |  66.7 KiB |  00m00s
[ 57/152] elfutils-libelf-0:0.191-4.fc4 100% |  10.2 MiB/s | 209.8 KiB |  00m00s
[ 58/152] elfutils-0:0.191-4.fc40.x86_6 100% |  13.7 MiB/s | 531.3 KiB |  00m00s
[ 59/152] readline-0:8.2-8.fc40.x86_64  100% |  11.6 MiB/s | 213.3 KiB |  00m00s
[ 60/152] rpm-build-libs-0:4.19.1.1-1.f 100% |   5.5 MiB/s |  95.0 KiB |  00m00s
[ 61/152] rpm-libs-0:4.19.1.1-1.fc40.x8 100% |  15.9 MiB/s | 308.9 KiB |  00m00s
[ 62/152] xz-libs-1:5.4.6-3.fc40.x86_64 100% |   5.7 MiB/s | 110.0 KiB |  00m00s
[ 63/152] fedora-repos-0:40-1.noarch    100% | 523.8 KiB/s |   9.4 KiB |  00m00s
[ 64/152] mpfr-0:4.2.1-3.fc40.x86_64    100% |  17.0 MiB/s | 349.0 KiB |  00m00s
[ 65/152] audit-libs-0:4.0.1-1.fc40.x86 100% |   7.2 MiB/s | 125.3 KiB |  00m00s
[ 66/152] libeconf-0:0.6.2-1.fc40.x86_6 100% |   1.9 MiB/s |  31.9 KiB |  00m00s
[ 67/152] libsemanage-0:3.6-3.fc40.x86_ 100% |   6.7 MiB/s | 116.4 KiB |  00m00s
[ 68/152] libxcrypt-0:4.4.36-5.fc40.x86 100% |   6.4 MiB/s | 118.1 KiB |  00m00s
[ 69/152] pam-libs-0:1.6.0-2.fc40.x86_6 100% |   3.3 MiB/s |  57.1 KiB |  00m00s
[ 70/152] setup-0:2.14.5-2.fc40.noarch  100% |   8.4 MiB/s | 154.7 KiB |  00m00s
[ 71/152] libcap-ng-0:0.8.4-4.fc40.x86_ 100% |   2.0 MiB/s |  32.6 KiB |  00m00s
[ 72/152] libutempter-0:1.2.1-13.fc40.x 100% |   1.6 MiB/s |  26.4 KiB |  00m00s
[ 73/152] systemd-libs-0:255.4-1.fc40.x 100% |  30.0 MiB/s | 707.7 KiB |  00m00s
[ 74/152] zlib-ng-compat-0:2.1.6-2.fc40 100% |   4.7 MiB/s |  77.1 KiB |  00m00s
[ 75/152] ncurses-base-0:6.4-12.2024012 100% |   5.1 MiB/s |  88.8 KiB |  00m00s
[ 76/152] libsepol-0:3.6-3.fc40.x86_64  100% |  17.5 MiB/s | 340.1 KiB |  00m00s
[ 77/152] ca-certificates-0:2023.2.62_v 100% |  35.1 MiB/s | 862.1 KiB |  00m00s
[ 78/152] crypto-policies-0:20240201-2. 100% |   5.7 MiB/s |  99.8 KiB |  00m00s
[ 79/152] pcre2-syntax-0:10.42-2.fc40.2 100% |   7.7 MiB/s | 142.7 KiB |  00m00s
[ 80/152] file-libs-0:5.45-4.fc40.x86_6 100% |  32.4 MiB/s | 762.7 KiB |  00m00s
[ 81/152] libarchive-0:3.7.2-3.fc40.x86 100% |  19.9 MiB/s | 407.1 KiB |  00m00s
[ 82/152] elfutils-libs-0:0.191-4.fc40. 100% |  14.1 MiB/s | 259.9 KiB |  00m00s
[ 83/152] elfutils-debuginfod-client-0: 100% |   2.3 MiB/s |  38.5 KiB |  00m00s
[ 84/152] libgcc-0:14.0.1-0.15.fc40.x86 100% |   7.2 MiB/s | 125.8 KiB |  00m00s
[ 85/152] libstdc++-0:14.0.1-0.15.fc40. 100% |  36.0 MiB/s | 883.7 KiB |  00m00s
[ 86/152] libgomp-0:14.0.1-0.15.fc40.x8 100% |  17.8 MiB/s | 346.3 KiB |  00m00s
[ 87/152] lua-libs-0:5.4.6-5.fc40.x86_6 100% |   7.6 MiB/s | 131.9 KiB |  00m00s
[ 88/152] rpm-sequoia-0:1.6.0-2.fc40.x8 100% |  33.1 MiB/s | 847.5 KiB |  00m00s
[ 89/152] sqlite-libs-0:3.45.1-2.fc40.x 100% |  29.9 MiB/s | 705.1 KiB |  00m00s
[ 90/152] glibc-common-0:2.39-8.fc40.x8 100% | 881.3 KiB/s | 386.0 KiB |  00m00s
[ 91/152] fedora-gpg-keys-0:40-1.noarch 100% |   7.6 MiB/s | 132.0 KiB |  00m00s
[ 92/152] lz4-libs-0:1.9.4-6.fc40.x86_6 100% |   3.9 MiB/s |  67.2 KiB |  00m00s
[ 93/152] elfutils-default-yama-scope-0 100% | 846.0 KiB/s |  13.5 KiB |  00m00s
[ 94/152] util-linux-core-0:2.40.1-1.fc 100% |   1.0 MiB/s | 537.0 KiB |  00m01s
[ 95/152] basesystem-0:11-20.fc40.noarc 100% | 449.3 KiB/s |   7.2 KiB |  00m00s
[ 96/152] glibc-0:2.39-8.fc40.x86_64    100% |   4.0 MiB/s |   2.2 MiB |  00m01s
[ 97/152] libcap-0:2.69-8.fc40.x86_64   100% | 194.7 KiB/s |  85.7 KiB |  00m00s
[ 98/152] glibc-gconv-extra-0:2.39-8.fc 100% |   2.2 MiB/s |   1.7 MiB |  00m01s
[ 99/152] libzstd-0:1.5.6-1.fc40.x86_64 100% |   1.4 MiB/s | 309.2 KiB |  00m00s
[100/152] alternatives-0:1.26-3.fc40.x8 100% |   1.1 MiB/s |  39.9 KiB |  00m00s
[101/152] zstd-0:1.5.6-1.fc40.x86_64    100% |   1.7 MiB/s | 479.4 KiB |  00m00s
[102/152] jansson-0:2.13.1-9.fc40.x86_6 100% |   1.2 MiB/s |  44.2 KiB |  00m00s
[103/152] pkgconf-pkg-config-0:2.1.0-1. 100% | 570.8 KiB/s |   9.7 KiB |  00m00s
[104/152] binutils-gold-0:2.41-34.fc40. 100% |  10.2 MiB/s | 781.6 KiB |  00m00s
[105/152] binutils-0:2.41-34.fc40.x86_6 100% |  50.4 MiB/s |   6.2 MiB |  00m00s
[106/152] pkgconf-0:2.1.0-1.fc40.x86_64 100% |   1.8 MiB/s |  43.5 KiB |  00m00s
[107/152] pkgconf-m4-0:2.1.0-1.fc40.noa 100% | 819.0 KiB/s |  13.9 KiB |  00m00s
[108/152] libpkgconf-0:2.1.0-1.fc40.x86 100% |   2.3 MiB/s |  37.8 KiB |  00m00s
[109/152] curl-0:8.6.0-8.fc40.x86_64    100% |   1.9 MiB/s | 300.7 KiB |  00m00s
[110/152] forge-srpm-macros-0:0.3.1-1.f 100% | 113.2 KiB/s |  19.5 KiB |  00m00s
[111/152] qt6-srpm-macros-0:6.7.0-1.fc4 100% |  32.6 KiB/s |   8.9 KiB |  00m00s
[112/152] ed-0:1.20.2-1.fc40.x86_64     100% | 615.9 KiB/s |  81.9 KiB |  00m00s
[113/152] libffi-0:3.4.4-7.fc40.x86_64  100% |   2.3 MiB/s |  39.4 KiB |  00m00s
[114/152] p11-kit-0:0.25.3-4.fc40.x86_6 100% |  22.8 MiB/s | 489.8 KiB |  00m00s
[115/152] libtasn1-0:4.19.0-6.fc40.x86_ 100% |   4.2 MiB/s |  73.7 KiB |  00m00s
[116/152] p11-kit-trust-0:0.25.3-4.fc40 100% |   7.6 MiB/s | 131.5 KiB |  00m00s
[117/152] libblkid-0:2.40.1-1.fc40.x86_ 100% |   2.2 MiB/s | 124.3 KiB |  00m00s
[118/152] libuuid-0:2.40.1-1.fc40.x86_6 100% | 517.1 KiB/s |  28.4 KiB |  00m00s
[119/152] libxml2-0:2.12.6-1.fc40.x86_6 100% |   3.2 MiB/s | 686.2 KiB |  00m00s
[120/152] libmount-0:2.40.1-1.fc40.x86_ 100% |   3.4 MiB/s | 154.6 KiB |  00m00s
[121/152] libsmartcols-0:2.40.1-1.fc40. 100% |   1.9 MiB/s |  83.3 KiB |  00m00s
[122/152] libfdisk-0:2.40.1-1.fc40.x86_ 100% |   3.2 MiB/s | 159.4 KiB |  00m00s
[123/152] authselect-libs-0:1.5.0-5.fc4 100% |  11.2 MiB/s | 218.6 KiB |  00m00s
[124/152] pam-0:1.6.0-2.fc40.x86_64     100% |  15.4 MiB/s | 552.8 KiB |  00m00s
[125/152] gdbm-libs-1:1.23-6.fc40.x86_6 100% |   3.2 MiB/s |  56.2 KiB |  00m00s
[126/152] libnsl2-0:2.0.1-1.fc40.x86_64 100% |   1.8 MiB/s |  29.6 KiB |  00m00s
[127/152] libpwquality-0:1.4.5-9.fc40.x 100% |   6.9 MiB/s | 119.7 KiB |  00m00s
[128/152] authselect-0:1.5.0-5.fc40.x86 100% |   2.5 MiB/s | 146.2 KiB |  00m00s
[129/152] libtirpc-0:1.3.4-1.rc3.fc40.x 100% |   5.3 MiB/s |  92.5 KiB |  00m00s
[130/152] cracklib-0:2.9.11-5.fc40.x86_ 100% |   5.3 MiB/s |  92.5 KiB |  00m00s
[131/152] libcom_err-0:1.47.0-5.fc40.x8 100% |   1.5 MiB/s |  25.4 KiB |  00m00s
[132/152] keyutils-libs-0:1.6.3-3.fc40. 100% |   1.9 MiB/s |  31.5 KiB |  00m00s
[133/152] libverto-0:0.3.2-8.fc40.x86_6 100% |   1.3 MiB/s |  20.5 KiB |  00m00s
[134/152] gdbm-1:1.23-6.fc40.x86_64     100% |   8.3 MiB/s | 152.5 KiB |  00m00s
[135/152] krb5-libs-0:1.21.2-5.fc40.x86 100% |  13.9 MiB/s | 756.1 KiB |  00m00s
[136/152] xxhash-libs-0:0.8.2-2.fc40.x8 100% |   2.1 MiB/s |  36.9 KiB |  00m00s
[137/152] gdb-minimal-0:14.2-1.fc40.x86 100% |  59.6 MiB/s |   4.3 MiB |  00m00s
[138/152] fedora-release-0:40-39.noarch 100% | 142.2 KiB/s |  10.8 KiB |  00m00s
[139/152] libidn2-0:2.3.7-1.fc40.x86_64 100% |   6.4 MiB/s | 118.7 KiB |  00m00s
[140/152] libbrotli-0:1.1.0-3.fc40.x86_ 100% |  16.5 MiB/s | 338.4 KiB |  00m00s
[141/152] libpsl-0:0.21.5-3.fc40.x86_64 100% |   3.9 MiB/s |  63.9 KiB |  00m00s
[142/152] libssh-0:0.10.6-5.fc40.x86_64 100% |  11.4 MiB/s | 210.6 KiB |  00m00s
[143/152] openldap-0:2.6.7-1.fc40.x86_6 100% |  13.1 MiB/s | 254.3 KiB |  00m00s
[144/152] libunistring-0:1.1-7.fc40.x86 100% |  24.2 MiB/s | 545.5 KiB |  00m00s
[145/152] publicsuffix-list-dafsa-0:202 100% |   3.5 MiB/s |  58.1 KiB |  00m00s
[146/152] libssh-config-0:0.10.6-5.fc40 100% | 564.3 KiB/s |   9.0 KiB |  00m00s
[147/152] libcurl-0:8.6.0-8.fc40.x86_64 100% |   2.5 MiB/s | 344.9 KiB |  00m00s
[148/152] libevent-0:2.1.12-12.fc40.x86 100% |  12.0 MiB/s | 257.2 KiB |  00m00s
[149/152] cyrus-sasl-lib-0:2.1.28-19.fc 100% |  29.6 MiB/s | 789.3 KiB |  00m00s
[150/152] libtool-ltdl-0:2.4.7-10.fc40. 100% |   2.2 MiB/s |  36.2 KiB |  00m00s
[151/152] libnghttp2-0:1.59.0-3.fc40.x8 100% |   1.7 MiB/s |  75.3 KiB |  00m00s
[152/152] fedora-release-identity-basic 100% | 168.0 KiB/s |  11.6 KiB |  00m00s
--------------------------------------------------------------------------------
[152/152] Total                         100% |  16.5 MiB/s |  52.8 MiB |  00m03s
Running transaction
Importing PGP key 0xA15B79CC:
 Userid     : "Fedora (40) <fedora-40-primary@fedoraproject.org>"
 Fingerprint: 115DF9AEF857853EE8445D0A0727707EA15B79CC
 From       : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-40-primary
The key was successfully imported.
[  1/154] Verify package files          100% | 575.0   B/s | 152.0   B |  00m00s
>>> Running pre-transaction scriptlet: filesystem-0:3.18-8.fc40.x86_64
>>> Stop pre-transaction scriptlet: filesystem-0:3.18-8.fc40.x86_64
[  2/154] Prepare transaction           100% |   1.8 KiB/s | 152.0   B |  00m00s
[  3/154] Installing libgcc-0:14.0.1-0. 100% | 133.0 MiB/s | 272.3 KiB |  00m00s
>>> Running post-install scriptlet: libgcc-0:14.0.1-0.15.fc40.x86_64
>>> Stop post-install scriptlet: libgcc-0:14.0.1-0.15.fc40.x86_64
[  4/154] Installing crypto-policies-0: 100% |  16.1 MiB/s | 181.7 KiB |  00m00s
>>> Running post-install scriptlet: crypto-policies-0:20240201-2.git9f501f3.fc40
>>> Stop post-install scriptlet: crypto-policies-0:20240201-2.git9f501f3.fc40.no
[  5/154] Installing fedora-release-ide 100% | 890.6 KiB/s | 912.0   B |  00m00s
[  6/154] Installing fedora-gpg-keys-0: 100% |  20.8 MiB/s | 170.1 KiB |  00m00s
[  7/154] Installing fedora-repos-0:40- 100% |   5.6 MiB/s |   5.7 KiB |  00m00s
[  8/154] Installing fedora-release-com 100% |  11.4 MiB/s |  23.3 KiB |  00m00s
[  9/154] Installing fedora-release-0:4 100% |   0.0   B/s | 124.0   B |  00m00s
[ 10/154] Installing setup-0:2.14.5-2.f 100% |  47.3 MiB/s | 725.8 KiB |  00m00s
>>> Running post-install scriptlet: setup-0:2.14.5-2.fc40.noarch
>>> Stop post-install scriptlet: setup-0:2.14.5-2.fc40.noarch
[ 11/154] Installing filesystem-0:3.18- 100% |   1.6 MiB/s | 212.4 KiB |  00m00s
[ 12/154] Installing basesystem-0:11-20 100% |   0.0   B/s | 124.0   B |  00m00s
[ 13/154] Installing libssh-config-0:0. 100% | 796.9 KiB/s | 816.0   B |  00m00s
[ 14/154] Installing publicsuffix-list- 100% |  66.7 MiB/s |  68.3 KiB |  00m00s
[ 15/154] Installing qt6-srpm-macros-0: 100% |   0.0   B/s | 732.0   B |  00m00s
[ 16/154] Installing pkgconf-m4-0:2.1.0 100% |   0.0   B/s |  14.3 KiB |  00m00s
[ 17/154] Installing pcre2-syntax-0:10. 100% | 116.0 MiB/s | 237.6 KiB |  00m00s
[ 18/154] Installing ncurses-base-0:6.4 100% |  38.2 MiB/s | 351.6 KiB |  00m00s
[ 19/154] Installing glibc-minimal-lang 100% |   0.0   B/s | 124.0   B |  00m00s
[ 20/154] Installing ncurses-libs-0:6.4 100% | 135.3 MiB/s | 969.7 KiB |  00m00s
>>> Running pre-install scriptlet: glibc-0:2.39-8.fc40.x86_64
>>> Stop pre-install scriptlet: glibc-0:2.39-8.fc40.x86_64
[ 21/154] Installing glibc-0:2.39-8.fc4 100% | 118.4 MiB/s |   6.8 MiB |  00m00s
>>> Running post-install scriptlet: glibc-0:2.39-8.fc40.x86_64
>>> Stop post-install scriptlet: glibc-0:2.39-8.fc40.x86_64
[ 22/154] Installing bash-0:5.2.26-3.fc 100% | 263.3 MiB/s |   8.2 MiB |  00m00s
>>> Running post-install scriptlet: bash-0:5.2.26-3.fc40.x86_64
>>> Stop post-install scriptlet: bash-0:5.2.26-3.fc40.x86_64
[ 23/154] Installing glibc-common-0:2.3 100% | 127.6 MiB/s |   1.0 MiB |  00m00s
[ 24/154] Installing glibc-gconv-extra- 100% | 124.8 MiB/s |   7.9 MiB |  00m00s
>>> Running post-install scriptlet: glibc-gconv-extra-0:2.39-8.fc40.x86_64
>>> Stop post-install scriptlet: glibc-gconv-extra-0:2.39-8.fc40.x86_64
[ 25/154] Installing zlib-ng-compat-0:2 100% | 131.7 MiB/s | 134.8 KiB |  00m00s
[ 26/154] Installing xz-libs-1:5.4.6-3. 100% | 206.0 MiB/s | 210.9 KiB |  00m00s
[ 27/154] Installing bzip2-libs-0:1.0.8 100% |  79.9 MiB/s |  81.8 KiB |  00m00s
[ 28/154] Installing popt-0:1.19-6.fc40 100% |  35.0 MiB/s | 143.5 KiB |  00m00s
[ 29/154] Installing readline-0:8.2-8.f 100% | 160.0 MiB/s | 491.4 KiB |  00m00s
[ 30/154] Installing libstdc++-0:14.0.1 100% | 251.1 MiB/s |   2.8 MiB |  00m00s
[ 31/154] Installing libzstd-0:1.5.6-1. 100% | 256.9 MiB/s | 789.2 KiB |  00m00s
[ 32/154] Installing elfutils-libelf-0: 100% | 292.3 MiB/s |   1.2 MiB |  00m00s
[ 33/154] Installing libuuid-0:2.40.1-1 100% |  37.5 MiB/s |  38.4 KiB |  00m00s
[ 34/154] Installing libblkid-0:2.40.1- 100% | 126.8 MiB/s | 259.7 KiB |  00m00s
[ 35/154] Installing gmp-1:6.2.1-8.fc40 100% | 259.4 MiB/s | 796.8 KiB |  00m00s
[ 36/154] Installing libattr-0:2.5.2-3. 100% |  28.8 MiB/s |  29.5 KiB |  00m00s
[ 37/154] Installing libacl-0:2.3.2-1.f 100% |  39.9 MiB/s |  40.8 KiB |  00m00s
[ 38/154] Installing libxcrypt-0:4.4.36 100% | 129.7 MiB/s | 265.5 KiB |  00m00s
[ 39/154] Installing libeconf-0:0.6.2-1 100% |  58.2 MiB/s |  59.6 KiB |  00m00s
[ 40/154] Installing lz4-libs-0:1.9.4-6 100% | 127.4 MiB/s | 130.5 KiB |  00m00s
[ 41/154] Installing gdbm-libs-1:1.23-6 100% | 120.7 MiB/s | 123.6 KiB |  00m00s
[ 42/154] Installing mpfr-0:4.2.1-3.fc4 100% | 203.5 MiB/s | 833.5 KiB |  00m00s
[ 43/154] Installing gawk-0:5.3.0-3.fc4 100% | 172.8 MiB/s |   1.7 MiB |  00m00s
[ 44/154] Installing dwz-0:0.15-6.fc40. 100% | 142.7 MiB/s | 292.3 KiB |  00m00s
[ 45/154] Installing unzip-0:6.0-63.fc4 100% | 125.8 MiB/s | 386.3 KiB |  00m00s
[ 46/154] Installing file-libs-0:5.45-4 100% | 472.9 MiB/s |   9.9 MiB |  00m00s
[ 47/154] Installing file-0:5.45-4.fc40 100% | 102.6 MiB/s | 105.0 KiB |  00m00s
[ 48/154] Installing pcre2-0:10.42-2.fc 100% | 208.0 MiB/s | 639.1 KiB |  00m00s
[ 49/154] Installing grep-0:3.11-7.fc40 100% | 111.5 MiB/s |   1.0 MiB |  00m00s
[ 50/154] Installing xz-1:5.4.6-3.fc40. 100% | 143.0 MiB/s |   2.0 MiB |  00m00s
[ 51/154] Installing libcap-ng-0:0.8.4- 100% |  73.2 MiB/s |  75.0 KiB |  00m00s
[ 52/154] Installing audit-libs-0:4.0.1 100% | 160.9 MiB/s | 329.4 KiB |  00m00s
[ 53/154] Installing pam-libs-0:1.6.0-2 100% |  67.1 MiB/s | 137.4 KiB |  00m00s
[ 54/154] Installing libcap-0:2.69-8.fc 100% |  73.2 MiB/s | 224.8 KiB |  00m00s
[ 55/154] Installing systemd-libs-0:255 100% | 275.7 MiB/s |   1.9 MiB |  00m00s
[ 56/154] Installing libsepol-0:3.6-3.f 100% | 261.4 MiB/s | 803.0 KiB |  00m00s
[ 57/154] Installing libselinux-0:3.6-4 100% |  85.1 MiB/s | 174.3 KiB |  00m00s
[ 58/154] Installing sed-0:4.9-1.fc40.x 100% | 121.3 MiB/s | 869.7 KiB |  00m00s
[ 59/154] Installing findutils-1:4.9.0- 100% | 162.9 MiB/s |   1.5 MiB |  00m00s
[ 60/154] Installing libmount-0:2.40.1- 100% | 172.3 MiB/s | 352.8 KiB |  00m00s
[ 61/154] Installing lua-libs-0:5.4.6-5 100% | 137.8 MiB/s | 282.3 KiB |  00m00s
[ 62/154] Installing alternatives-0:1.2 100% |  62.5 MiB/s |  64.0 KiB |  00m00s
[ 63/154] Installing jansson-0:2.13.1-9 100% |  87.6 MiB/s |  89.7 KiB |  00m00s
[ 64/154] Installing libtasn1-0:4.19.0- 100% | 173.3 MiB/s | 177.5 KiB |  00m00s
[ 65/154] Installing libsmartcols-0:2.4 100% | 177.3 MiB/s | 181.5 KiB |  00m00s
[ 66/154] Installing libcom_err-0:1.47. 100% |  66.7 MiB/s |  68.3 KiB |  00m00s
[ 67/154] Installing libunistring-0:1.1 100% | 288.5 MiB/s |   1.7 MiB |  00m00s
[ 68/154] Installing libidn2-0:2.3.7-1. 100% |  81.8 MiB/s | 335.0 KiB |  00m00s
[ 69/154] Installing libpsl-0:0.21.5-3. 100% |  79.7 MiB/s |  81.6 KiB |  00m00s
[ 70/154] Installing util-linux-core-0: 100% | 123.8 MiB/s |   1.5 MiB |  00m00s
[ 71/154] Installing tar-2:1.35-3.fc40. 100% | 227.0 MiB/s |   3.0 MiB |  00m00s
[ 72/154] Installing libsemanage-0:3.6- 100% |  96.1 MiB/s | 295.3 KiB |  00m00s
[ 73/154] Installing shadow-utils-2:4.1 100% |  75.8 MiB/s |   4.2 MiB |  00m00s
>>> Running pre-install scriptlet: libutempter-0:1.2.1-13.fc40.x86_64
>>> Stop pre-install scriptlet: libutempter-0:1.2.1-13.fc40.x86_64
[ 74/154] Installing libutempter-0:1.2. 100% |  29.2 MiB/s |  59.7 KiB |  00m00s
[ 75/154] Installing zip-0:3.0-40.fc40. 100% | 172.6 MiB/s | 707.1 KiB |  00m00s
[ 76/154] Installing gdbm-1:1.23-6.fc40 100% | 113.7 MiB/s | 465.8 KiB |  00m00s
[ 77/154] Installing cyrus-sasl-lib-0:2 100% | 228.3 MiB/s |   2.3 MiB |  00m00s
[ 78/154] Installing zstd-0:1.5.6-1.fc4 100% | 279.3 MiB/s |   1.7 MiB |  00m00s
[ 79/154] Installing libfdisk-0:2.40.1- 100% | 177.7 MiB/s | 364.0 KiB |  00m00s
[ 80/154] Installing bzip2-0:1.0.8-18.f 100% |  47.0 MiB/s |  96.2 KiB |  00m00s
[ 81/154] Installing libxml2-0:2.12.6-1 100% | 242.9 MiB/s |   1.7 MiB |  00m00s
[ 82/154] Installing sqlite-libs-0:3.45 100% | 280.3 MiB/s |   1.4 MiB |  00m00s
[ 83/154] Installing elfutils-default-y 100% | 145.9 KiB/s |   2.0 KiB |  00m00s
>>> Running post-install scriptlet: elfutils-default-yama-scope-0:0.191-4.fc40.n
>>> Stop post-install scriptlet: elfutils-default-yama-scope-0:0.191-4.fc40.noar
[ 84/154] Installing ed-0:1.20.2-1.fc40 100% |  72.8 MiB/s | 149.2 KiB |  00m00s
[ 85/154] Installing patch-0:2.7.6-24.f 100% | 129.0 MiB/s | 264.3 KiB |  00m00s
[ 86/154] Installing cpio-0:2.15-1.fc40 100% | 137.5 MiB/s |   1.1 MiB |  00m00s
[ 87/154] Installing diffutils-0:3.10-5 100% | 176.2 MiB/s |   1.6 MiB |  00m00s
[ 88/154] Installing libgomp-0:14.0.1-0 100% | 254.3 MiB/s | 520.8 KiB |  00m00s
[ 89/154] Installing libpkgconf-0:2.1.0 100% |  73.6 MiB/s |  75.3 KiB |  00m00s
[ 90/154] Installing pkgconf-0:2.1.0-1. 100% |  41.5 MiB/s |  84.9 KiB |  00m00s
[ 91/154] Installing pkgconf-pkg-config 100% |   1.7 MiB/s |   1.8 KiB |  00m00s
[ 92/154] Installing libffi-0:3.4.4-7.f 100% |  81.0 MiB/s |  83.0 KiB |  00m00s
[ 93/154] Installing p11-kit-0:0.25.3-4 100% | 109.7 MiB/s |   2.2 MiB |  00m00s
[ 94/154] Installing p11-kit-trust-0:0. 100% |  25.6 MiB/s | 393.1 KiB |  00m00s
>>> Running post-install scriptlet: p11-kit-trust-0:0.25.3-4.fc40.x86_64
>>> Stop post-install scriptlet: p11-kit-trust-0:0.25.3-4.fc40.x86_64
[ 95/154] Installing keyutils-libs-0:1. 100% |  54.5 MiB/s |  55.8 KiB |  00m00s
[ 96/154] Installing libverto-0:0.3.2-8 100% |  30.5 MiB/s |  31.3 KiB |  00m00s
[ 97/154] Installing xxhash-libs-0:0.8. 100% |  87.8 MiB/s |  89.9 KiB |  00m00s
[ 98/154] Installing libbrotli-0:1.1.0- 100% | 162.5 MiB/s | 831.8 KiB |  00m00s
[ 99/154] Installing libtool-ltdl-0:2.4 100% |  65.7 MiB/s |  67.3 KiB |  00m00s
[100/154] Installing libnghttp2-0:1.59. 100% | 163.3 MiB/s | 167.2 KiB |  00m00s
[101/154] Installing rust-srpm-macros-0 100% |   5.4 MiB/s |   5.6 KiB |  00m00s
[102/154] Installing qt5-srpm-macros-0: 100% |   0.0   B/s | 768.0   B |  00m00s
[103/154] Installing perl-srpm-macros-0 100% |   0.0   B/s |   1.1 KiB |  00m00s
[104/154] Installing package-notes-srpm 100% |   0.0   B/s |   2.0 KiB |  00m00s
[105/154] Installing openblas-srpm-macr 100% |   0.0   B/s | 384.0   B |  00m00s
[106/154] Installing ocaml-srpm-macros- 100% |   0.0   B/s |   2.2 KiB |  00m00s
[107/154] Installing kernel-srpm-macros 100% |   0.0   B/s |   2.3 KiB |  00m00s
[108/154] Installing gnat-srpm-macros-0 100% |   0.0   B/s |   1.3 KiB |  00m00s
[109/154] Installing ghc-srpm-macros-0: 100% |   0.0   B/s | 992.0   B |  00m00s
[110/154] Installing fpc-srpm-macros-0: 100% |   0.0   B/s | 420.0   B |  00m00s
[111/154] Installing ansible-srpm-macro 100% |  35.4 MiB/s |  36.2 KiB |  00m00s
[112/154] Installing coreutils-common-0 100% | 254.8 MiB/s |  11.5 MiB |  00m00s
[113/154] Installing openssl-libs-1:3.2 100% | 324.5 MiB/s |   7.8 MiB |  00m00s
[114/154] Installing coreutils-0:9.4-6. 100% | 145.4 MiB/s |   5.8 MiB |  00m00s
>>> Running pre-install scriptlet: ca-certificates-0:2023.2.62_v7.0.401-6.fc40.n
>>> Stop pre-install scriptlet: ca-certificates-0:2023.2.62_v7.0.401-6.fc40.noar
[115/154] Installing ca-certificates-0: 100% |   2.3 MiB/s |   2.3 MiB |  00m01s
>>> Running post-install scriptlet: ca-certificates-0:2023.2.62_v7.0.401-6.fc40.
>>> Stop post-install scriptlet: ca-certificates-0:2023.2.62_v7.0.401-6.fc40.noa
[116/154] Installing krb5-libs-0:1.21.2 100% | 163.9 MiB/s |   2.3 MiB |  00m00s
[117/154] Installing libtirpc-0:1.3.4-1 100% |  99.9 MiB/s | 204.6 KiB |  00m00s
[118/154] Installing gzip-0:1.13-1.fc40 100% |  95.4 MiB/s | 390.6 KiB |  00m00s
[119/154] Installing authselect-libs-0: 100% |  81.4 MiB/s | 833.2 KiB |  00m00s
[120/154] Installing libarchive-0:3.7.2 100% | 223.8 MiB/s | 916.6 KiB |  00m00s
[121/154] Installing authselect-0:1.5.0 100% |  51.4 MiB/s | 157.9 KiB |  00m00s
[122/154] Installing cracklib-0:2.9.11- 100% |  34.9 MiB/s | 250.3 KiB |  00m00s
[123/154] Installing libpwquality-0:1.4 100% |  52.5 MiB/s | 430.1 KiB |  00m00s
[124/154] Installing libnsl2-0:2.0.1-1. 100% |  28.8 MiB/s |  59.0 KiB |  00m00s
[125/154] Installing pam-0:1.6.0-2.fc40 100% |  78.7 MiB/s |   1.8 MiB |  00m00s
[126/154] Installing libssh-0:0.10.6-5. 100% | 124.8 MiB/s | 511.4 KiB |  00m00s
[127/154] Installing rpm-sequoia-0:1.6. 100% | 278.7 MiB/s |   2.2 MiB |  00m00s
[128/154] Installing rpm-libs-0:4.19.1. 100% | 173.7 MiB/s | 711.4 KiB |  00m00s
[129/154] Installing libevent-0:2.1.12- 100% | 175.7 MiB/s | 899.4 KiB |  00m00s
[130/154] Installing openldap-0:2.6.7-1 100% | 156.0 MiB/s | 638.9 KiB |  00m00s
[131/154] Installing libcurl-0:8.6.0-8. 100% | 188.9 MiB/s | 773.9 KiB |  00m00s
[132/154] Installing elfutils-libs-0:0. 100% | 158.2 MiB/s | 648.0 KiB |  00m00s
[133/154] Installing elfutils-debuginfo 100% |  32.7 MiB/s |  66.9 KiB |  00m00s
[134/154] Installing binutils-gold-0:2. 100% |  88.1 MiB/s |   2.0 MiB |  00m00s
>>> Running post-install scriptlet: binutils-gold-0:2.41-34.fc40.x86_64
>>> Stop post-install scriptlet: binutils-gold-0:2.41-34.fc40.x86_64
[135/154] Installing binutils-0:2.41-34 100% | 258.8 MiB/s |  26.4 MiB |  00m00s
>>> Running post-install scriptlet: binutils-0:2.41-34.fc40.x86_64
>>> Stop post-install scriptlet: binutils-0:2.41-34.fc40.x86_64
[136/154] Installing elfutils-0:0.191-4 100% | 213.1 MiB/s |   2.6 MiB |  00m00s
[137/154] Installing gdb-minimal-0:14.2 100% | 316.6 MiB/s |  12.7 MiB |  00m00s
[138/154] Installing debugedit-0:5.0-14 100% |  65.7 MiB/s | 201.7 KiB |  00m00s
[139/154] Installing rpm-build-libs-0:4 100% |  97.3 MiB/s | 199.2 KiB |  00m00s
[140/154] Installing curl-0:8.6.0-8.fc4 100% |  30.0 MiB/s | 736.9 KiB |  00m00s
>>> Running pre-install scriptlet: rpm-0:4.19.1.1-1.fc40.x86_64
>>> Stop pre-install scriptlet: rpm-0:4.19.1.1-1.fc40.x86_64
[141/154] Installing rpm-0:4.19.1.1-1.f 100% |  85.6 MiB/s |   2.4 MiB |  00m00s
[142/154] Installing efi-srpm-macros-0: 100% |  40.2 MiB/s |  41.2 KiB |  00m00s
[143/154] Installing lua-srpm-macros-0: 100% |   1.9 MiB/s |   1.9 KiB |  00m00s
[144/154] Installing zig-srpm-macros-0: 100% |   1.6 MiB/s |   1.7 KiB |  00m00s
[145/154] Installing python-srpm-macros 100% |  50.1 MiB/s |  51.3 KiB |  00m00s
[146/154] Installing fonts-srpm-macros- 100% |  55.1 MiB/s |  56.5 KiB |  00m00s
[147/154] Installing go-srpm-macros-0:3 100% |  60.2 MiB/s |  61.6 KiB |  00m00s
[148/154] Installing forge-srpm-macros- 100% |  39.4 MiB/s |  40.3 KiB |  00m00s
[149/154] Installing redhat-rpm-config- 100% |  46.8 MiB/s | 191.7 KiB |  00m00s
[150/154] Installing rpm-build-0:4.19.1 100% |  44.4 MiB/s | 182.0 KiB |  00m00s
[151/154] Installing pyproject-srpm-mac 100% |   1.0 MiB/s |   2.1 KiB |  00m00s
[152/154] Installing util-linux-0:2.40. 100% |  76.4 MiB/s |   3.7 MiB |  00m00s
>>> Running post-install scriptlet: util-linux-0:2.40.1-1.fc40.x86_64
>>> Stop post-install scriptlet: util-linux-0:2.40.1-1.fc40.x86_64
[153/154] Installing which-0:2.21-41.fc 100% |  40.3 MiB/s |  82.4 KiB |  00m00s
[154/154] Installing info-0:7.1-2.fc40. 100% | 263.4 KiB/s | 358.2 KiB |  00m01s
>>> Running post-transaction scriptlet: filesystem-0:3.18-8.fc40.x86_64
>>> Stop post-transaction scriptlet: filesystem-0:3.18-8.fc40.x86_64
>>> Running post-transaction scriptlet: ca-certificates-0:2023.2.62_v7.0.401-6.f
>>> Stop post-transaction scriptlet: ca-certificates-0:2023.2.62_v7.0.401-6.fc40
>>> Running post-transaction scriptlet: authselect-libs-0:1.5.0-5.fc40.x86_64
>>> Stop post-transaction scriptlet: authselect-libs-0:1.5.0-5.fc40.x86_64
>>> Running post-transaction scriptlet: rpm-0:4.19.1.1-1.fc40.x86_64
>>> Stop post-transaction scriptlet: rpm-0:4.19.1.1-1.fc40.x86_64
>>> Running trigger-install scriptlet: glibc-common-0:2.39-8.fc40.x86_64
>>> Stop trigger-install scriptlet: glibc-common-0:2.39-8.fc40.x86_64
>>> Running trigger-install scriptlet: info-0:7.1-2.fc40.x86_64
>>> Stop trigger-install scriptlet: info-0:7.1-2.fc40.x86_64
Finish: installing minimal buildroot with dnf5
Start: creating root cache
Finish: creating root cache
Finish: chroot init
INFO: Installed packages:
INFO: alternatives-1.26-3.fc40.x86_64
ansible-srpm-macros-1-14.fc40.noarch
audit-libs-4.0.1-1.fc40.x86_64
authselect-1.5.0-5.fc40.x86_64
authselect-libs-1.5.0-5.fc40.x86_64
basesystem-11-20.fc40.noarch
bash-5.2.26-3.fc40.x86_64
binutils-2.41-34.fc40.x86_64
binutils-gold-2.41-34.fc40.x86_64
bzip2-1.0.8-18.fc40.x86_64
bzip2-libs-1.0.8-18.fc40.x86_64
ca-certificates-2023.2.62_v7.0.401-6.fc40.noarch
coreutils-9.4-6.fc40.x86_64
coreutils-common-9.4-6.fc40.x86_64
cpio-2.15-1.fc40.x86_64
cracklib-2.9.11-5.fc40.x86_64
crypto-policies-20240201-2.git9f501f3.fc40.noarch
curl-8.6.0-8.fc40.x86_64
cyrus-sasl-lib-2.1.28-19.fc40.x86_64
debugedit-5.0-14.fc40.x86_64
diffutils-3.10-5.fc40.x86_64
dwz-0.15-6.fc40.x86_64
ed-1.20.2-1.fc40.x86_64
efi-srpm-macros-5-11.fc40.noarch
elfutils-0.191-4.fc40.x86_64
elfutils-debuginfod-client-0.191-4.fc40.x86_64
elfutils-default-yama-scope-0.191-4.fc40.noarch
elfutils-libelf-0.191-4.fc40.x86_64
elfutils-libs-0.191-4.fc40.x86_64
fedora-gpg-keys-40-1.noarch
fedora-release-40-39.noarch
fedora-release-common-40-39.noarch
fedora-release-identity-basic-40-39.noarch
fedora-repos-40-1.noarch
file-5.45-4.fc40.x86_64
file-libs-5.45-4.fc40.x86_64
filesystem-3.18-8.fc40.x86_64
findutils-4.9.0-8.fc40.x86_64
fonts-srpm-macros-2.0.5-14.fc40.noarch
forge-srpm-macros-0.3.1-1.fc40.noarch
fpc-srpm-macros-1.3-12.fc40.noarch
gawk-5.3.0-3.fc40.x86_64
gdb-minimal-14.2-1.fc40.x86_64
gdbm-1.23-6.fc40.x86_64
gdbm-libs-1.23-6.fc40.x86_64
ghc-srpm-macros-1.9-1.fc40.noarch
glibc-2.39-8.fc40.x86_64
glibc-common-2.39-8.fc40.x86_64
glibc-gconv-extra-2.39-8.fc40.x86_64
glibc-minimal-langpack-2.39-8.fc40.x86_64
gmp-6.2.1-8.fc40.x86_64
gnat-srpm-macros-6-5.fc40.noarch
go-srpm-macros-3.5.0-1.fc40.noarch
gpg-pubkey-a15b79cc-63d04c2c
grep-3.11-7.fc40.x86_64
gzip-1.13-1.fc40.x86_64
info-7.1-2.fc40.x86_64
jansson-2.13.1-9.fc40.x86_64
kernel-srpm-macros-1.0-23.fc40.noarch
keyutils-libs-1.6.3-3.fc40.x86_64
krb5-libs-1.21.2-5.fc40.x86_64
libacl-2.3.2-1.fc40.x86_64
libarchive-3.7.2-3.fc40.x86_64
libattr-2.5.2-3.fc40.x86_64
libblkid-2.40.1-1.fc40.x86_64
libbrotli-1.1.0-3.fc40.x86_64
libcap-2.69-8.fc40.x86_64
libcap-ng-0.8.4-4.fc40.x86_64
libcom_err-1.47.0-5.fc40.x86_64
libcurl-8.6.0-8.fc40.x86_64
libeconf-0.6.2-1.fc40.x86_64
libevent-2.1.12-12.fc40.x86_64
libfdisk-2.40.1-1.fc40.x86_64
libffi-3.4.4-7.fc40.x86_64
libgcc-14.0.1-0.15.fc40.x86_64
libgomp-14.0.1-0.15.fc40.x86_64
libidn2-2.3.7-1.fc40.x86_64
libmount-2.40.1-1.fc40.x86_64
libnghttp2-1.59.0-3.fc40.x86_64
libnsl2-2.0.1-1.fc40.x86_64
libpkgconf-2.1.0-1.fc40.x86_64
libpsl-0.21.5-3.fc40.x86_64
libpwquality-1.4.5-9.fc40.x86_64
libselinux-3.6-4.fc40.x86_64
libsemanage-3.6-3.fc40.x86_64
libsepol-3.6-3.fc40.x86_64
libsmartcols-2.40.1-1.fc40.x86_64
libssh-0.10.6-5.fc40.x86_64
libssh-config-0.10.6-5.fc40.noarch
libstdc++-14.0.1-0.15.fc40.x86_64
libtasn1-4.19.0-6.fc40.x86_64
libtirpc-1.3.4-1.rc3.fc40.x86_64
libtool-ltdl-2.4.7-10.fc40.x86_64
libunistring-1.1-7.fc40.x86_64
libutempter-1.2.1-13.fc40.x86_64
libuuid-2.40.1-1.fc40.x86_64
libverto-0.3.2-8.fc40.x86_64
libxcrypt-4.4.36-5.fc40.x86_64
libxml2-2.12.6-1.fc40.x86_64
libzstd-1.5.6-1.fc40.x86_64
lua-libs-5.4.6-5.fc40.x86_64
lua-srpm-macros-1-13.fc40.noarch
lz4-libs-1.9.4-6.fc40.x86_64
mpfr-4.2.1-3.fc40.x86_64
ncurses-base-6.4-12.20240127.fc40.noarch
ncurses-libs-6.4-12.20240127.fc40.x86_64
ocaml-srpm-macros-9-3.fc40.noarch
openblas-srpm-macros-2-16.fc40.noarch
openldap-2.6.7-1.fc40.x86_64
openssl-libs-3.2.1-2.fc40.x86_64
p11-kit-0.25.3-4.fc40.x86_64
p11-kit-trust-0.25.3-4.fc40.x86_64
package-notes-srpm-macros-0.5-11.fc40.noarch
pam-1.6.0-2.fc40.x86_64
pam-libs-1.6.0-2.fc40.x86_64
patch-2.7.6-24.fc40.x86_64
pcre2-10.42-2.fc40.2.x86_64
pcre2-syntax-10.42-2.fc40.2.noarch
perl-srpm-macros-1-53.fc40.noarch
pkgconf-2.1.0-1.fc40.x86_64
pkgconf-m4-2.1.0-1.fc40.noarch
pkgconf-pkg-config-2.1.0-1.fc40.x86_64
popt-1.19-6.fc40.x86_64
publicsuffix-list-dafsa-20240107-3.fc40.noarch
pyproject-srpm-macros-1.12.0-1.fc40.noarch
python-srpm-macros-3.12-7.fc40.noarch
qt5-srpm-macros-5.15.13-1.fc40.noarch
qt6-srpm-macros-6.7.0-1.fc40.noarch
readline-8.2-8.fc40.x86_64
redhat-rpm-config-286-1.fc40.noarch
rpm-4.19.1.1-1.fc40.x86_64
rpm-build-4.19.1.1-1.fc40.x86_64
rpm-build-libs-4.19.1.1-1.fc40.x86_64
rpm-libs-4.19.1.1-1.fc40.x86_64
rpm-sequoia-1.6.0-2.fc40.x86_64
rust-srpm-macros-26.2-1.fc40.noarch
sed-4.9-1.fc40.x86_64
setup-2.14.5-2.fc40.noarch
shadow-utils-4.15.1-2.fc40.x86_64
sqlite-libs-3.45.1-2.fc40.x86_64
systemd-libs-255.4-1.fc40.x86_64
tar-1.35-3.fc40.x86_64
unzip-6.0-63.fc40.x86_64
util-linux-2.40.1-1.fc40.x86_64
util-linux-core-2.40.1-1.fc40.x86_64
which-2.21-41.fc40.x86_64
xxhash-libs-0.8.2-2.fc40.x86_64
xz-5.4.6-3.fc40.x86_64
xz-libs-5.4.6-3.fc40.x86_64
zig-srpm-macros-1-2.fc40.noarch
zip-3.0-40.fc40.x86_64
zlib-ng-compat-2.1.6-2.fc40.x86_64
zstd-1.5.6-1.fc40.x86_64
Start: buildsrpm
Start: rpmbuild -bs
warning: source_date_epoch_from_changelog set but %changelog is missing
Building target platforms: x86_64
Building for target x86_64
Wrote: /builddir/build/SRPMS/R-CRAN-Seurat-5.1.0-1.fc40.copr7435327.src.rpm

RPM build warnings:
    source_date_epoch_from_changelog set but %changelog is missing
Finish: rpmbuild -bs
cp: preserving permissions for ‘/var/lib/copr-rpmbuild/results/chroot_scan/var/lib/mock/fedora-40-x86_64-1715391297.000742/root/var/log’: No such file or directory
INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan
INFO: /var/lib/mock/fedora-40-x86_64-1715391297.000742/root/var/log/dnf5.log
Finish: buildsrpm
INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-4bc7g17b/R-CRAN-Seurat/R-CRAN-Seurat.spec) Config(child) 0 minutes 53 seconds
INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results
INFO: Cleaning up build root ('cleanup_on_success=True')
Start: clean chroot
INFO: unmounting tmpfs.
Finish: clean chroot
INFO: Start(/var/lib/copr-rpmbuild/results/R-CRAN-Seurat-5.1.0-1.fc40.copr7435327.src.rpm)  Config(fedora-40-x86_64)
Start: chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-40-x86_64-1715391297.000742/root.
INFO: calling preinit hooks
INFO: enabled root cache
Start: unpacking root cache
Finish: unpacking root cache
INFO: enabled package manager cache
Start: cleaning package manager metadata
Finish: cleaning package manager metadata
INFO: enabled HW Info plugin
INFO: Buildroot is handled by package management from host and used with --installroot:
  rpm-4.19.1.1-1.fc39.x86_64
  rpm-sequoia-1.6.0-1.fc39.x86_64
  python3-dnf-4.19.2-1.fc39.noarch
  python3-dnf-plugins-core-4.6.0-1.fc39.noarch
  yum-4.19.2-1.fc39.noarch
  dnf5-5.1.17-1.fc39.x86_64
  dnf5-plugins-5.1.17-1.fc39.x86_64
Finish: chroot init
Start: build phase for R-CRAN-Seurat-5.1.0-1.fc40.copr7435327.src.rpm
Start: build setup for R-CRAN-Seurat-5.1.0-1.fc40.copr7435327.src.rpm
warning: source_date_epoch_from_changelog set but %changelog is missing
Building target platforms: x86_64
Building for target x86_64
Wrote: /builddir/build/SRPMS/R-CRAN-Seurat-5.1.0-1.fc40.copr7435327.src.rpm

RPM build warnings:
    source_date_epoch_from_changelog set but %changelog is missing
Updating and loading repositories:
 updates                                100% | 750.3 KiB/s |  21.8 KiB |  00m00s
 fedora                                 100% | 809.9 KiB/s |  22.7 KiB |  00m00s
 Copr repository                        100% |  14.0 KiB/s |   1.5 KiB |  00m00s
 Copr repository                        100% |  19.9 MiB/s |  11.8 MiB |  00m01s
Repositories loaded.
Package                      Arch   Version                          Repository      Size
Installing:                                                                              
 R-CRAN-KernSmooth           x86_64 2.23.22-1.fc40.copr7352638       copr_base  145.2 KiB
 R-CRAN-MASS                 x86_64 7.3.60.2-1.fc40.copr7382389      copr_base    1.8 MiB
 R-CRAN-Matrix               x86_64 1.7.0-1.fc40.copr7382390         copr_base    8.0 MiB
 R-CRAN-RANN                 x86_64 2.6.1-3.fc40.copr7350087         copr_base   87.2 KiB
 R-CRAN-RColorBrewer         noarch 1.1.3-1.fc40.copr7349948         copr_base   63.6 KiB
 R-CRAN-ROCR                 noarch 1.0.11-1.fc40.copr7357984        copr_base  605.7 KiB
 R-CRAN-RSpectra             x86_64 0.16.1-1.fc40.copr7356093        copr_base    1.2 MiB
 R-CRAN-Rcpp                 x86_64 1.0.12-1.fc40.copr7349917        copr_base    8.3 MiB
 R-CRAN-RcppAnnoy            x86_64 0.0.22-1.fc40.copr7354510        copr_base  635.8 KiB
 R-CRAN-RcppEigen            x86_64 0.3.4.0.0-1.fc40.copr7353593     copr_base    9.0 MiB
 R-CRAN-RcppHNSW             x86_64 0.6.0-1.fc40.copr7354842         copr_base  587.6 KiB
 R-CRAN-RcppProgress         noarch 0.4.2-3.fc40.copr7350251         copr_base   49.9 KiB
 R-CRAN-Rtsne                x86_64 0.17-1.fc40.copr7353635          copr_base  241.7 KiB
 R-CRAN-SeuratObject         x86_64 5.0.2-1.fc40.copr7428030         copr_base    3.0 MiB
 R-CRAN-cluster              x86_64 2.1.6-1.fc40.copr7352635         copr_base  996.2 KiB
 R-CRAN-cowplot              noarch 1.1.3-1.fc40.copr7362489         copr_base    2.1 MiB
 R-CRAN-fastDummies          noarch 1.7.3-1.fc40.copr7361375         copr_base  111.3 KiB
 R-CRAN-fitdistrplus         noarch 1.1.11-1.fc40.copr7357947        copr_base    3.0 MiB
 R-CRAN-future               noarch 1.33.2-1.fc40.copr7356063        copr_base    1.2 MiB
 R-CRAN-future.apply         noarch 1.11.2-1.fc40.copr7357936        copr_base  232.0 KiB
 R-CRAN-generics             noarch 0.1.3-1.fc40.copr7350006         copr_base  160.2 KiB
 R-CRAN-ggplot2              noarch 3.5.1-1.fc40.copr7361224         copr_base    7.1 MiB
 R-CRAN-ggrepel              x86_64 0.9.5-1.fc40.copr7362427         copr_base  449.4 KiB
 R-CRAN-ggridges             noarch 0.5.6-1.fc40.copr7362419         copr_base    3.0 MiB
 R-CRAN-httr                 noarch 1.4.7-1.fc40.copr7357937         copr_base  752.3 KiB
 R-CRAN-ica                  noarch 1.0.3-1.fc40.copr7351152         copr_base  125.3 KiB
 R-CRAN-igraph               x86_64 2.0.3-1.fc40.copr7357926         copr_base   10.0 MiB
 R-CRAN-irlba                x86_64 2.3.5.1-1.fc40.copr7356083       copr_base  354.8 KiB
 R-CRAN-jsonlite             x86_64 1.8.8-1.fc40.copr7349934         copr_base    2.3 MiB
 R-CRAN-leiden               noarch 0.4.3.1-1.fc40.copr7359877       copr_base    5.4 MiB
 R-CRAN-lifecycle            noarch 1.0.4-1.fc40.copr7354340         copr_base  282.7 KiB
 R-CRAN-lmtest               x86_64 0.9.40-1.fc40.copr7356084        copr_base  565.6 KiB
 R-CRAN-matrixStats          x86_64 1.3.0-1.fc40.copr7349920         copr_base    1.1 MiB
 R-CRAN-miniUI               noarch 0.1.1.1-3.fc40.copr7361228       copr_base   54.4 KiB
 R-CRAN-patchwork            noarch 1.2.0-1.fc40.copr7363400         copr_base    4.1 MiB
 R-CRAN-pbapply              noarch 1.7.2-1.fc40.copr7350039         copr_base  146.0 KiB
 R-CRAN-plotly               noarch 4.10.4-1.fc40.copr7364942        copr_base    6.7 MiB
 R-CRAN-png                  x86_64 0.1.8-1.fc40.copr7350042         copr_base   70.2 KiB
 R-CRAN-progressr            noarch 0.14.0-1.fc40.copr7355098        copr_base    1.5 MiB
 R-CRAN-purrr                x86_64 1.0.2-1.fc40.copr7357927         copr_base  878.1 KiB
 R-CRAN-reticulate           x86_64 1.36.1-1.fc40.copr7356092        copr_base    2.8 MiB
 R-CRAN-rlang                x86_64 1.1.3-1.fc40.copr7349924         copr_base    2.6 MiB
 R-CRAN-scales               noarch 1.3.0-1.fc40.copr7356067         copr_base    1.1 MiB
 R-CRAN-scattermore          x86_64 1.2-1.fc40.copr7363483           copr_base  542.1 KiB
 R-CRAN-sctransform          x86_64 0.4.1-1.fc40.copr7363012         copr_base  741.2 KiB
 R-CRAN-shiny                noarch 1.8.1.1-1.fc40.copr7359528       copr_base   13.0 MiB
 R-CRAN-spatstat.explore     x86_64 3.2.7-1.fc40.copr7362195         copr_base    5.3 MiB
 R-CRAN-spatstat.geom        x86_64 3.2.9-1.fc40.copr7359002         copr_base    6.4 MiB
 R-CRAN-tibble               x86_64 3.2.1-1.fc40.copr7359525         copr_base    1.7 MiB
 R-CRAN-uwot                 x86_64 0.2.2-1.fc40.copr7358737         copr_base    1.8 MiB
 R-core                      x86_64 4.4.0-1.fc40                     updates    100.7 MiB
 R-devel                     x86_64 4.4.0-1.fc40                     updates      0.0   B
Installing dependencies:                                                                 
 R-CRAN-FNN                  x86_64 1.1.4-1.fc40.copr7350000         copr_base  228.6 KiB
 R-CRAN-R6                   noarch 2.5.1-1.fc40.copr7349938         copr_base  115.9 KiB
 R-CRAN-RcppTOML             x86_64 0.2.2-1.fc40.copr7353935         copr_base  894.2 KiB
 R-CRAN-abind                noarch 1.4.5-3.fc40.copr7349922         copr_base   92.0 KiB
 R-CRAN-askpass              x86_64 1.2.0-1.fc40.copr7353610         copr_base   40.4 KiB
 R-CRAN-base64enc            x86_64 0.1.3-3.fc40.copr7349951         copr_base   51.7 KiB
 R-CRAN-bitops               x86_64 1.0.7-1.fc40.copr7349970         copr_base   56.7 KiB
 R-CRAN-bslib                noarch 0.7.0-1.fc40.copr7359007         copr_base   10.0 MiB
 R-CRAN-caTools              x86_64 1.18.2-1.fc40.copr7353648        copr_base  354.5 KiB
 R-CRAN-cachem               x86_64 1.0.8-1.fc40.copr7355336         copr_base  104.7 KiB
 R-CRAN-cli                  x86_64 3.6.2-1.fc40.copr7349961         copr_base    2.4 MiB
 R-CRAN-codetools            noarch 0.2.20-1.fc40.copr7352636        copr_base  106.3 KiB
 R-CRAN-colorspace           x86_64 2.1.0-1.fc40.copr7349953         copr_base    4.0 MiB
 R-CRAN-commonmark           x86_64 1.9.1-1.fc40.copr7349974         copr_base  316.8 KiB
 R-CRAN-crayon               noarch 1.5.2-1.fc40.copr7349942         copr_base  232.3 KiB
 R-CRAN-crosstalk            noarch 1.2.1-1.fc40.copr7356073         copr_base    1.0 MiB
 R-CRAN-curl                 x86_64 5.2.1-1.fc40.copr7349943         copr_base    2.1 MiB
 R-CRAN-data.table           x86_64 1.15.4-1.fc40.copr7349979        copr_base    3.8 MiB
 R-CRAN-deldir               x86_64 2.0.4-1.fc40.copr7349981         copr_base  455.3 KiB
 R-CRAN-digest               x86_64 0.6.35-1.fc40.copr7349925        copr_base  484.1 KiB
 R-CRAN-dotCall64            x86_64 1.1.1-1.fc40.copr7349989         copr_base   76.8 KiB
 R-CRAN-dplyr                x86_64 1.1.4-1.fc40.copr7361225         copr_base    2.6 MiB
 R-CRAN-evaluate             noarch 0.23-1.fc40.copr7349992          copr_base  122.1 KiB
 R-CRAN-fansi                x86_64 1.0.6-1.fc40.copr7349952         copr_base  625.8 KiB
 R-CRAN-farver               x86_64 2.1.1-1.fc40.copr7349997         copr_base    2.0 MiB
 R-CRAN-fastmap              x86_64 1.1.1-1.fc40.copr7350946         copr_base  108.1 KiB
 R-CRAN-fontawesome          noarch 0.5.2-1.fc40.copr7357346         copr_base    2.0 MiB
 R-CRAN-fs                   x86_64 1.6.4-1.fc40.copr7373524         copr_base  597.0 KiB
 R-CRAN-globals              noarch 0.16.3-1.fc40.copr7353590        copr_base  137.2 KiB
 R-CRAN-glue                 x86_64 1.7.0-1.fc40.copr7349919         copr_base  261.2 KiB
 R-CRAN-goftest              x86_64 1.2.3-1.fc40.copr7350009         copr_base   97.8 KiB
 R-CRAN-gplots               noarch 3.1.3.1-1.fc40.copr7356122       copr_base  845.7 KiB
 R-CRAN-gridExtra            noarch 2.3-3.fc40.copr7357925           copr_base    1.6 MiB
 R-CRAN-gtable               noarch 0.3.5-1.fc40.copr7356060         copr_base  306.7 KiB
 R-CRAN-gtools               x86_64 3.9.5-1.fc40.copr7349932         copr_base  534.9 KiB
 R-CRAN-here                 noarch 1.0.1-1.fc40.copr7353623         copr_base  138.9 KiB
 R-CRAN-highr                noarch 0.10-1.fc40.copr7353625          copr_base   71.7 KiB
 R-CRAN-htmltools            x86_64 0.5.8.1-1.fc40.copr7353596       copr_base  522.9 KiB
 R-CRAN-htmlwidgets          noarch 1.6.4-1.fc40.copr7361223         copr_base    2.0 MiB
 R-CRAN-httpuv               x86_64 1.6.15-1.fc40.copr7357930        copr_base    1.0 MiB
 R-CRAN-isoband              x86_64 0.2.7-1.fc40.copr7351195         copr_base    1.9 MiB
 R-CRAN-jquerylib            noarch 0.1.4-1.fc40.copr7357136         copr_base    1.5 MiB
 R-CRAN-knitr                noarch 1.46-1.fc40.copr7356108          copr_base    1.6 MiB
 R-CRAN-labeling             noarch 0.4.3-1.fc40.copr7349947         copr_base   92.7 KiB
 R-CRAN-later                x86_64 1.3.2-1.fc40.copr7353600         copr_base  265.1 KiB
 R-CRAN-lattice              x86_64 0.22.6-1.fc40.copr7352639        copr_base    2.0 MiB
 R-CRAN-lazyeval             x86_64 0.2.2-3.fc40.copr7349927         copr_base  362.3 KiB
 R-CRAN-listenv              noarch 0.9.1-1.fc40.copr7349926         copr_base  157.8 KiB
 R-CRAN-magrittr             x86_64 2.0.3-1.fc40.copr7349936         copr_base  417.3 KiB
 R-CRAN-memoise              noarch 2.0.1-1.fc40.copr7356088         copr_base   83.7 KiB
 R-CRAN-mgcv                 x86_64 1.9.1-1.fc40.copr7357272         copr_base    4.5 MiB
 R-CRAN-mime                 x86_64 0.12-1.fc40.copr7349941          copr_base   55.1 KiB
 R-CRAN-munsell              noarch 0.5.1-1.fc40.copr7353599         copr_base  379.0 KiB
 R-CRAN-nlme                 x86_64 3.1.164-1.fc40.copr7355272       copr_base    3.8 MiB
 R-CRAN-openssl              x86_64 2.1.2-1.fc40.copr7356071         copr_base    3.2 MiB
 R-CRAN-parallelly           x86_64 1.37.1-1.fc40.copr7352653        copr_base  551.7 KiB
 R-CRAN-pillar               noarch 1.9.0-1.fc40.copr7357931         copr_base    1.4 MiB
 R-CRAN-pkgconfig            noarch 2.0.3-3.fc40.copr7349937         copr_base   34.0 KiB
 R-CRAN-plyr                 x86_64 1.8.9-1.fc40.copr7353597         copr_base    1.1 MiB
 R-CRAN-polyclip             x86_64 1.10.6-1.fc40.copr7350044        copr_base  234.5 KiB
 R-CRAN-promises             x86_64 1.3.0-1.fc40.copr7356068         copr_base    2.5 MiB
 R-CRAN-rappdirs             x86_64 0.3.3-1.fc40.copr7350054         copr_base   86.4 KiB
 R-CRAN-reshape2             x86_64 1.4.4-3.fc40.copr7359520         copr_base  215.1 KiB
 R-CRAN-rmarkdown            noarch 2.26-1.fc40.copr7359560          copr_base    6.8 MiB
 R-CRAN-rprojroot            noarch 2.0.4-1.fc40.copr7349963         copr_base  198.2 KiB
 R-CRAN-sass                 x86_64 0.4.9-1.fc40.copr7356969         copr_base    4.2 MiB
 R-CRAN-sourcetools          x86_64 0.1.7.1-1.fc40.copr7349949       copr_base  133.5 KiB
 R-CRAN-sp                   x86_64 2.1.4-1.fc40.copr7395268         copr_base    4.1 MiB
 R-CRAN-spam                 x86_64 2.10.0-1.fc40.copr7353662        copr_base    3.5 MiB
 R-CRAN-spatstat.data        noarch 3.0.4-1.fc40.copr7356113         copr_base    4.3 MiB
 R-CRAN-spatstat.random      x86_64 3.2.3-1.fc40.copr7360760         copr_base    1.9 MiB
 R-CRAN-spatstat.sparse      x86_64 3.0.3-1.fc40.copr7357193         copr_base  307.2 KiB
 R-CRAN-spatstat.utils       x86_64 3.0.4-1.fc40.copr7350066         copr_base  576.7 KiB
 R-CRAN-stringi              x86_64 1.8.4-1.fc40.copr7422034         copr_base    2.0 MiB
 R-CRAN-stringr              noarch 1.5.1-1.fc40.copr7357924         copr_base  646.8 KiB
 R-CRAN-survival             x86_64 3.6.4-1.fc40.copr7357273         copr_base    8.6 MiB
 R-CRAN-sys                  x86_64 3.4.2-1.fc40.copr7349955         copr_base   79.4 KiB
 R-CRAN-tensor               noarch 1.5-3.fc40.copr7350073           copr_base   20.4 KiB
 R-CRAN-tidyr                x86_64 1.3.1-1.fc40.copr7362421         copr_base    1.8 MiB
 R-CRAN-tidyselect           noarch 1.2.1-1.fc40.copr7357928         copr_base  433.3 KiB
 R-CRAN-tinytex              noarch 0.51-1.fc40.copr7422036          copr_base  186.8 KiB
 R-CRAN-utf8                 x86_64 1.2.4-1.fc40.copr7349954         copr_base  470.9 KiB
 R-CRAN-vctrs                x86_64 0.6.5-1.fc40.copr7356070         copr_base    2.3 MiB
 R-CRAN-viridisLite          noarch 0.4.2-1.fc40.copr7349928         copr_base    1.3 MiB
 R-CRAN-withr                noarch 3.0.0-1.fc40.copr7349929         copr_base  420.0 KiB
 R-CRAN-xfun                 x86_64 0.43-1.fc40.copr7349940          copr_base  816.9 KiB
 R-CRAN-xtable               noarch 1.8.4-3.fc40.copr7349933         copr_base  895.3 KiB
 R-CRAN-yaml                 x86_64 2.3.8-1.fc40.copr7349946         copr_base  274.9 KiB
 R-CRAN-zoo                  x86_64 1.8.12-1.fc40.copr7353591        copr_base    1.5 MiB
 R-core-devel                x86_64 4.4.0-1.fc40                     updates    394.1 KiB
 R-java                      x86_64 4.4.0-1.fc40                     updates      0.0   B
 R-java-devel                x86_64 4.4.0-1.fc40                     updates      0.0   B
 R-littler                   x86_64 0.3.19-4.fc40                    updates    157.9 KiB
 R-rpm-macros                noarch 1.2.1-10.fc40                    updates      5.6 KiB
 abattis-cantarell-vf-fonts  noarch 0.301-12.fc40                    fedora     192.7 KiB
 alsa-lib                    x86_64 1.2.11-2.fc40                    fedora       1.4 MiB
 annobin-docs                noarch 12.51-1.fc40                     updates     95.7 KiB
 annobin-plugin-gcc          x86_64 12.51-1.fc40                     updates    970.9 KiB
 avahi-libs                  x86_64 0.8-26.fc40                      fedora     166.3 KiB
 brotli                      x86_64 1.1.0-3.fc40                     fedora      31.8 KiB
 brotli-devel                x86_64 1.1.0-3.fc40                     fedora      65.6 KiB
 bzip2-devel                 x86_64 1.0.8-18.fc40                    fedora     309.8 KiB
 cairo                       x86_64 1.18.0-3.fc40                    fedora       1.7 MiB
 cmake-filesystem            x86_64 3.28.2-1.fc40                    fedora       0.0   B
 copy-jdk-configs            noarch 4.1-5.fc40                       fedora      20.3 KiB
 cpp                         x86_64 14.0.1-0.15.fc40                 fedora      34.9 MiB
 crypto-policies-scripts     noarch 20240201-2.git9f501f3.fc40       fedora     313.8 KiB
 cups-libs                   x86_64 1:2.4.7-13.fc40                  updates    618.9 KiB
 dbus-libs                   x86_64 1:1.14.10-3.fc40                 fedora     368.9 KiB
 default-fonts-core-sans     noarch 4.0-13.fc40                      updates     11.9 KiB
 desktop-file-utils          x86_64 0.26-12.fc40                     fedora     226.0 KiB
 emacs-filesystem            noarch 1:29.3-6.fc40                    updates      0.0   B
 expat                       x86_64 2.6.2-1.fc40                     updates    280.8 KiB
 flexiblas                   x86_64 3.4.2-1.fc40                     fedora      46.9 KiB
 flexiblas-devel             x86_64 3.4.2-1.fc40                     fedora       4.7 MiB
 flexiblas-netlib            x86_64 3.4.2-1.fc40                     fedora      10.4 MiB
 flexiblas-netlib64          x86_64 3.4.2-1.fc40                     fedora      10.5 MiB
 flexiblas-openblas-openmp   x86_64 3.4.2-1.fc40                     fedora      39.3 KiB
 flexiblas-openblas-openmp64 x86_64 3.4.2-1.fc40                     fedora      39.3 KiB
 fontconfig                  x86_64 2.15.0-4.fc40                    fedora     767.3 KiB
 fontconfig-devel            x86_64 2.15.0-4.fc40                    fedora     117.2 KiB
 fonts-filesystem            noarch 1:2.0.5-14.fc40                  fedora       0.0   B
 freetype                    x86_64 2.13.2-5.fc40                    fedora     842.6 KiB
 freetype-devel              x86_64 2.13.2-5.fc40                    fedora       7.8 MiB
 fribidi                     x86_64 1.0.13-4.fc40                    fedora     365.3 KiB
 gc                          x86_64 8.2.2-6.fc40                     fedora     258.7 KiB
 gcc                         x86_64 14.0.1-0.15.fc40                 fedora     104.0 MiB
 gcc-c++                     x86_64 14.0.1-0.15.fc40                 fedora      38.1 MiB
 gcc-gfortran                x86_64 14.0.1-0.15.fc40                 fedora      37.2 MiB
 gcc-plugin-annobin          x86_64 14.0.1-0.15.fc40                 fedora      57.1 KiB
 gettext                     x86_64 0.22.5-2.fc40                    fedora       5.2 MiB
 gettext-envsubst            x86_64 0.22.5-2.fc40                    fedora      74.9 KiB
 gettext-libs                x86_64 0.22.5-2.fc40                    fedora       1.7 MiB
 gettext-runtime             x86_64 0.22.5-2.fc40                    fedora     481.3 KiB
 glib2                       x86_64 2.80.0-1.fc40                    fedora      14.4 MiB
 glib2-devel                 x86_64 2.80.0-1.fc40                    fedora      15.4 MiB
 glibc-devel                 x86_64 2.39-8.fc40                      updates     36.3 KiB
 glibc-headers-x86           noarch 2.39-8.fc40                      updates      2.2 MiB
 glpk                        x86_64 5.0-11.fc40                      fedora     870.7 KiB
 gnutls                      x86_64 3.8.5-1.fc40                     updates      3.2 MiB
 google-noto-fonts-common    noarch 20240301-2.fc40                  fedora      17.5 KiB
 google-noto-sans-vf-fonts   noarch 20240301-2.fc40                  fedora       1.2 MiB
 graphite2                   x86_64 1.3.14-15.fc40                   fedora     192.0 KiB
 graphite2-devel             x86_64 1.3.14-15.fc40                   fedora      49.1 KiB
 guile30                     x86_64 3.0.7-12.fc40                    fedora      51.5 MiB
 harfbuzz                    x86_64 8.3.0-5.fc40                     fedora       2.6 MiB
 harfbuzz-devel              x86_64 8.3.0-5.fc40                     fedora       5.1 MiB
 harfbuzz-icu                x86_64 8.3.0-5.fc40                     fedora      15.5 KiB
 java-21-openjdk             x86_64 1:21.0.3.0.9-1.fc40              updates      1.1 MiB
 java-21-openjdk-devel       x86_64 1:21.0.3.0.9-1.fc40              updates     11.2 MiB
 java-21-openjdk-headless    x86_64 1:21.0.3.0.9-1.fc40              updates    205.0 MiB
 javapackages-filesystem     noarch 6.2.0-9.fc40                     fedora       1.9 KiB
 jbigkit-libs                x86_64 2.1-29.fc40                      fedora     117.6 KiB
 kernel-headers              x86_64 6.8.3-300.fc40                   fedora       6.2 MiB
 libICE                      x86_64 1.1.1-3.fc40                     fedora     181.2 KiB
 libRmath                    x86_64 4.4.0-1.fc40                     updates    242.8 KiB
 libRmath-devel              x86_64 4.4.0-1.fc40                     updates     17.4 KiB
 libSM                       x86_64 1.2.4-3.fc40                     fedora      97.3 KiB
 libX11                      x86_64 1.8.9-1.fc40                     updates      1.3 MiB
 libX11-common               noarch 1.8.9-1.fc40                     updates      1.1 MiB
 libX11-devel                x86_64 1.8.9-1.fc40                     updates      1.0 MiB
 libX11-xcb                  x86_64 1.8.9-1.fc40                     updates     15.0 KiB
 libXau                      x86_64 1.0.11-6.fc40                    fedora      66.9 KiB
 libXau-devel                x86_64 1.0.11-6.fc40                    fedora       6.4 KiB
 libXcomposite               x86_64 0.4.6-3.fc40                     fedora      44.5 KiB
 libXext                     x86_64 1.3.6-1.fc40                     fedora      90.1 KiB
 libXft                      x86_64 2.3.8-6.fc40                     fedora     164.5 KiB
 libXft-devel                x86_64 2.3.8-6.fc40                     fedora      31.7 KiB
 libXi                       x86_64 1.8.1-5.fc40                     fedora      80.7 KiB
 libXmu                      x86_64 1.2.1-1.fc40                     updates    187.5 KiB
 libXrender                  x86_64 0.9.11-6.fc40                    fedora      50.1 KiB
 libXrender-devel            x86_64 0.9.11-6.fc40                    fedora      50.1 KiB
 libXt                       x86_64 1.3.0-3.fc40                     fedora     425.9 KiB
 libXtst                     x86_64 1.2.4-6.fc40                     fedora      33.6 KiB
 libb2                       x86_64 0.98.1-11.fc40                   fedora      42.2 KiB
 libblkid-devel              x86_64 2.40.1-1.fc40                    updates     44.9 KiB
 libdatrie                   x86_64 0.2.13-9.fc40                    fedora      57.9 KiB
 libffi-devel                x86_64 3.4.4-7.fc40                     fedora      33.3 KiB
 libfontenc                  x86_64 1.1.7-3.fc40                     fedora      65.0 KiB
 libgfortran                 x86_64 14.0.1-0.15.fc40                 fedora       2.9 MiB
 libicu                      x86_64 74.2-1.fc40                      fedora      34.9 MiB
 libicu-devel                x86_64 74.2-1.fc40                      fedora       5.6 MiB
 libjpeg-turbo               x86_64 3.0.2-1.fc40                     fedora     776.9 KiB
 liblerc                     x86_64 4.0.0-6.fc40                     fedora     603.5 KiB
 libmount-devel              x86_64 2.40.1-1.fc40                    updates     63.5 KiB
 libmpc                      x86_64 1.3.1-5.fc40                     fedora     164.7 KiB
 libpng                      x86_64 2:1.6.40-3.fc40                  fedora     241.8 KiB
 libpng-devel                x86_64 2:1.6.40-3.fc40                  fedora     881.5 KiB
 libquadmath                 x86_64 14.0.1-0.15.fc40                 fedora     325.9 KiB
 libquadmath-devel           x86_64 14.0.1-0.15.fc40                 fedora      21.8 KiB
 libselinux-devel            x86_64 3.6-4.fc40                       fedora     126.1 KiB
 libsepol-devel              x86_64 3.6-3.fc40                       fedora     120.2 KiB
 libstdc++-devel             x86_64 14.0.1-0.15.fc40                 fedora      15.4 MiB
 libthai                     x86_64 0.1.29-8.fc40                    fedora     783.5 KiB
 libtiff                     x86_64 4.6.0-2.fc40                     fedora       1.1 MiB
 libtirpc-devel              x86_64 1.3.4-1.rc3.fc40                 fedora     251.6 KiB
 libwebp                     x86_64 1.3.2-5.fc40                     fedora     793.6 KiB
 libxcb                      x86_64 1.17.0-1.fc40                    updates      1.1 MiB
 libxcb-devel                x86_64 1.17.0-1.fc40                    updates      2.7 MiB
 libxcrypt-devel             x86_64 4.4.36-5.fc40                    fedora      30.3 KiB
 libxml2-devel               x86_64 2.12.6-1.fc40                    updates      3.4 MiB
 lksctp-tools                x86_64 1.0.19-6.fc40                    fedora     269.6 KiB
 lua                         x86_64 5.4.6-5.fc40                     fedora     597.8 KiB
 lua-posix                   x86_64 36.2.1-6.fc40                    fedora     599.7 KiB
 make                        x86_64 1:4.4.1-6.fc40                   fedora       1.8 MiB
 mkfontscale                 x86_64 1.2.2-6.fc40                     fedora      49.2 KiB
 mpdecimal                   x86_64 2.5.1-9.fc40                     fedora     200.9 KiB
 nettle                      x86_64 3.9.1-6.fc40                     fedora     790.1 KiB
 nspr                        x86_64 4.35.0-22.fc40                   updates    312.6 KiB
 nss                         x86_64 3.99.0-1.fc40                    updates      1.9 MiB
 nss-softokn                 x86_64 3.99.0-1.fc40                    updates      1.9 MiB
 nss-softokn-freebl          x86_64 3.99.0-1.fc40                    updates    896.6 KiB
 nss-sysinit                 x86_64 3.99.0-1.fc40                    updates     18.2 KiB
 nss-util                    x86_64 3.99.0-1.fc40                    updates    226.1 KiB
 openblas                    x86_64 0.3.26-4.fc40                    fedora      96.0 KiB
 openblas-openmp             x86_64 0.3.26-4.fc40                    fedora      38.9 MiB
 openblas-openmp64           x86_64 0.3.26-4.fc40                    fedora      39.1 MiB
 pango                       x86_64 1.52.2-1.fc40                    updates    995.9 KiB
 pcre2-devel                 x86_64 10.42-2.fc40.2                   fedora       1.9 MiB
 pcre2-utf16                 x86_64 10.42-2.fc40.2                   fedora     570.2 KiB
 pcre2-utf32                 x86_64 10.42-2.fc40.2                   fedora     542.1 KiB
 pixman                      x86_64 0.43.4-1.fc40                    updates    710.1 KiB
 python-pip-wheel            noarch 23.3.2-1.fc40                    fedora       1.5 MiB
 python3                     x86_64 3.12.3-2.fc40                    updates     31.5 KiB
 python3-libs                x86_64 3.12.3-2.fc40                    updates     40.9 MiB
 python3-packaging           noarch 23.2-4.fc40                      fedora     421.1 KiB
 suitesparse                 x86_64 7.6.0-1.fc40                     fedora     137.1 MiB
 sysprof-capture-devel       x86_64 46.0-1.fc40                      fedora     252.8 KiB
 tcl                         x86_64 1:8.6.13-2.fc40                  fedora       4.2 MiB
 tcl-devel                   x86_64 1:8.6.13-2.fc40                  fedora     809.0 KiB
 tk                          x86_64 1:8.6.13-3.fc40                  fedora       3.6 MiB
 tk-devel                    x86_64 1:8.6.13-3.fc40                  fedora     983.9 KiB
 tre                         x86_64 0.8.0-43.20140228gitc2f5d13.fc40 fedora      75.9 KiB
 tre-common                  noarch 0.8.0-43.20140228gitc2f5d13.fc40 fedora      81.0 KiB
 tre-devel                   x86_64 0.8.0-43.20140228gitc2f5d13.fc40 fedora      10.7 KiB
 ttmkfdir                    x86_64 3.0.9-70.fc40                    fedora     122.7 KiB
 tzdata                      noarch 2024a-5.fc40                     updates      1.6 MiB
 tzdata-java                 noarch 2024a-5.fc40                     updates    101.7 KiB
 xdg-utils                   noarch 1.2.1-1.fc40                     fedora     346.3 KiB
 xml-common                  noarch 0.6.3-63.fc40                    fedora      78.4 KiB
 xorg-x11-fonts-Type1        noarch 7.5-38.fc40                      fedora     863.3 KiB
 xorg-x11-proto-devel        noarch 2024.1-1.fc40                    updates      1.7 MiB
 xz-devel                    x86_64 1:5.4.6-3.fc40                   fedora     255.8 KiB
 zlib-ng-compat-devel        x86_64 2.1.6-2.fc40                     fedora     103.4 KiB

Transaction Summary:
 Installing:      296 packages

Total size of inbound packages is 424 MiB. Need to download 424 MiB.
After this operation 1 GiB will be used (install 1 GiB, remove 0 B).
[  1/296] R-CRAN-RANN-0:2.6.1-3.fc40.co 100% |   1.0 MiB/s |  53.8 KiB |  00m00s
[  2/296] R-CRAN-KernSmooth-0:2.23.22-1 100% |   1.4 MiB/s | 108.0 KiB |  00m00s
[  3/296] R-CRAN-MASS-0:7.3.60.2-1.fc40 100% |  14.7 MiB/s |   1.2 MiB |  00m00s
[  4/296] R-CRAN-RColorBrewer-0:1.1.3-1 100% |   2.1 MiB/s |  62.7 KiB |  00m00s
[  5/296] R-CRAN-Rcpp-0:1.0.12-1.fc40.c 100% |  43.3 MiB/s |   2.0 MiB |  00m00s
[  6/296] R-CRAN-ROCR-0:1.0.11-1.fc40.c 100% |   7.9 MiB/s | 463.7 KiB |  00m00s
[  7/296] R-CRAN-RcppEigen-0:0.3.4.0.0- 100% |  35.0 MiB/s |   1.4 MiB |  00m00s
[  8/296] R-CRAN-RcppAnnoy-0:0.0.22-1.f 100% |   4.1 MiB/s | 245.7 KiB |  00m00s
[  9/296] R-CRAN-RcppProgress-0:0.4.2-3 100% |   1.1 MiB/s |  35.4 KiB |  00m00s
[ 10/296] R-CRAN-RcppHNSW-0:0.6.0-1.fc4 100% |   4.1 MiB/s | 198.6 KiB |  00m00s
[ 11/296] R-CRAN-RSpectra-0:0.16.1-1.fc 100% |   2.9 MiB/s | 443.9 KiB |  00m00s
[ 12/296] R-CRAN-cluster-0:2.1.6-1.fc40 100% |  36.1 MiB/s | 627.7 KiB |  00m00s
[ 13/296] R-CRAN-cowplot-0:1.1.3-1.fc40 100% |  24.0 MiB/s |   1.3 MiB |  00m00s
[ 14/296] R-CRAN-Rtsne-0:0.17-1.fc40.co 100% |   1.4 MiB/s | 117.4 KiB |  00m00s
[ 15/296] R-CRAN-fastDummies-0:1.7.3-1. 100% | 749.2 KiB/s |  51.7 KiB |  00m00s
[ 16/296] R-CRAN-fitdistrplus-0:1.1.11- 100% |  26.1 MiB/s |   1.8 MiB |  00m00s
[ 17/296] R-CRAN-future.apply-0:1.11.2- 100% |  11.1 MiB/s | 171.1 KiB |  00m00s
[ 18/296] R-CRAN-future-0:1.33.2-1.fc40 100% |  20.6 MiB/s | 654.2 KiB |  00m00s
[ 19/296] R-CRAN-generics-0:0.1.3-1.fc4 100% |   6.0 MiB/s | 103.6 KiB |  00m00s
[ 20/296] R-CRAN-ggrepel-0:0.9.5-1.fc40 100% |  11.3 MiB/s | 278.5 KiB |  00m00s
[ 21/296] R-CRAN-ggplot2-0:3.5.1-1.fc40 100% |  43.2 MiB/s |   4.7 MiB |  00m00s
[ 22/296] R-CRAN-ggridges-0:0.5.6-1.fc4 100% |  23.9 MiB/s |   2.1 MiB |  00m00s
[ 23/296] R-CRAN-httr-0:1.4.7-1.fc40.co 100% |  34.9 MiB/s | 501.0 KiB |  00m00s
[ 24/296] R-CRAN-igraph-0:2.0.3-1.fc40. 100% |  64.5 MiB/s |   5.2 MiB |  00m00s
[ 25/296] R-CRAN-ica-0:1.0.3-1.fc40.cop 100% | 480.5 KiB/s |  98.0 KiB |  00m00s
[ 26/296] R-CRAN-jsonlite-0:1.8.8-1.fc4 100% |  41.4 MiB/s | 635.7 KiB |  00m00s
[ 27/296] R-CRAN-SeuratObject-0:5.0.2-1 100% |   3.3 MiB/s |   1.9 MiB |  00m01s
[ 28/296] R-CRAN-lifecycle-0:1.0.4-1.fc 100% |  12.7 MiB/s | 130.5 KiB |  00m00s
[ 29/296] R-CRAN-lmtest-0:0.9.40-1.fc40 100% |  18.1 MiB/s | 427.0 KiB |  00m00s
[ 30/296] R-CRAN-matrixStats-0:1.3.0-1. 100% |  25.0 MiB/s | 512.0 KiB |  00m00s
[ 31/296] R-CRAN-miniUI-0:0.1.1.1-3.fc4 100% |   3.9 MiB/s |  48.2 KiB |  00m00s
[ 32/296] R-CRAN-patchwork-0:1.2.0-1.fc 100% |  66.2 MiB/s |   3.1 MiB |  00m00s
[ 33/296] R-CRAN-pbapply-0:1.7.2-1.fc40 100% |   9.7 MiB/s | 118.9 KiB |  00m00s
[ 34/296] R-CRAN-plotly-0:4.10.4-1.fc40 100% |  23.3 MiB/s |   2.8 MiB |  00m00s
[ 35/296] R-CRAN-png-0:0.1.8-1.fc40.cop 100% |   4.4 MiB/s |  54.2 KiB |  00m00s
[ 36/296] R-CRAN-progressr-0:0.14.0-1.f 100% |  19.3 MiB/s | 354.8 KiB |  00m00s
[ 37/296] R-CRAN-purrr-0:1.0.2-1.fc40.c 100% |  35.6 MiB/s | 547.1 KiB |  00m00s
[ 38/296] R-CRAN-reticulate-0:1.36.1-1. 100% |  28.4 MiB/s |   1.7 MiB |  00m00s
[ 39/296] R-CRAN-irlba-0:2.3.5.1-1.fc40 100% | 563.5 KiB/s | 300.9 KiB |  00m01s
[ 40/296] R-CRAN-rlang-0:1.1.3-1.fc40.c 100% |  61.3 MiB/s |   1.7 MiB |  00m00s
[ 41/296] R-CRAN-scales-0:1.3.0-1.fc40. 100% |  25.5 MiB/s | 704.1 KiB |  00m00s
[ 42/296] R-CRAN-sctransform-0:0.4.1-1. 100% |   4.0 MiB/s | 504.9 KiB |  00m00s
[ 43/296] R-CRAN-scattermore-0:1.2-1.fc 100% |   2.6 MiB/s | 345.8 KiB |  00m00s
[ 44/296] R-CRAN-leiden-0:0.4.3.1-1.fc4 100% |   3.9 MiB/s |   2.3 MiB |  00m01s
[ 45/296] R-CRAN-shiny-0:1.8.1.1-1.fc40 100% |  66.0 MiB/s |   3.6 MiB |  00m00s
[ 46/296] R-CRAN-spatstat.explore-0:3.2 100% |  41.0 MiB/s |   3.5 MiB |  00m00s
[ 47/296] R-CRAN-tibble-0:3.2.1-1.fc40. 100% |  17.6 MiB/s | 630.7 KiB |  00m00s
[ 48/296] R-CRAN-spatstat.geom-0:3.2.9- 100% |  28.8 MiB/s |   4.1 MiB |  00m00s
[ 49/296] R-CRAN-Matrix-0:1.7.0-1.fc40. 100% |  41.2 MiB/s |   4.3 MiB |  00m00s
[ 50/296] R-CRAN-uwot-0:0.2.2-1.fc40.co 100% |   6.9 MiB/s | 923.2 KiB |  00m00s
[ 51/296] R-devel-0:4.4.0-1.fc40.x86_64 100% |  97.3 KiB/s |  10.1 KiB |  00m00s
[ 52/296] R-CRAN-gplots-0:3.1.3.1-1.fc4 100% |   2.4 MiB/s | 627.2 KiB |  00m00s
[ 53/296] flexiblas-netlib-0:3.4.2-1.fc 100% |  10.1 MiB/s |   3.2 MiB |  00m00s
[ 54/296] R-CRAN-gtable-0:0.3.5-1.fc40. 100% |  17.3 MiB/s | 230.3 KiB |  00m00s
[ 55/296] R-CRAN-data.table-0:1.15.4-1. 100% |  55.6 MiB/s |   2.1 MiB |  00m00s
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[218/296] flexiblas-openblas-openmp64-0 100% |   1.0 MiB/s |  17.7 KiB |  00m00s
[219/296] openblas-openmp64-0:0.3.26-4. 100% |  16.9 MiB/s |   4.9 MiB |  00m00s
[220/296] java-21-openjdk-headless-1:21 100% |  46.5 MiB/s |  47.7 MiB |  00m01s
[221/296] gcc-c++-0:14.0.1-0.15.fc40.x8 100% |  25.8 MiB/s |  14.2 MiB |  00m01s
[222/296] gcc-plugin-annobin-0:14.0.1-0 100% |   1.7 MiB/s |  47.7 KiB |  00m00s
[223/296] libmpc-0:1.3.1-5.fc40.x86_64  100% | 733.4 KiB/s |  71.1 KiB |  00m00s
[224/296] cpp-0:14.0.1-0.15.fc40.x86_64 100% |  23.8 MiB/s |  12.0 MiB |  00m01s
[225/296] libicu-devel-0:74.2-1.fc40.x8 100% |  19.7 MiB/s | 930.0 KiB |  00m00s
[226/296] libtirpc-devel-0:1.3.4-1.rc3. 100% |   7.1 MiB/s | 124.3 KiB |  00m00s
[227/296] pcre2-devel-0:10.42-2.fc40.2. 100% |  22.4 MiB/s | 504.6 KiB |  00m00s
[228/296] pcre2-utf16-0:10.42-2.fc40.2. 100% |  10.0 MiB/s | 215.8 KiB |  00m00s
[229/296] pcre2-utf32-0:10.42-2.fc40.2. 100% |  10.4 MiB/s | 203.2 KiB |  00m00s
[230/296] tcl-devel-1:8.6.13-2.fc40.x86 100% |   9.2 MiB/s | 169.6 KiB |  00m00s
[231/296] tk-devel-1:8.6.13-3.fc40.x86_ 100% |  24.0 MiB/s | 540.8 KiB |  00m00s
[232/296] tre-devel-0:0.8.0-43.20140228 100% | 623.6 KiB/s |  11.8 KiB |  00m00s
[233/296] xz-devel-1:5.4.6-3.fc40.x86_6 100% |   4.1 MiB/s |  67.0 KiB |  00m00s
[234/296] zlib-ng-compat-devel-0:2.1.6- 100% |   2.0 MiB/s |  36.1 KiB |  00m00s
[235/296] libXmu-0:1.2.1-1.fc40.x86_64  100% |   1.3 MiB/s |  77.7 KiB |  00m00s
[236/296] pango-0:1.52.2-1.fc40.x86_64  100% |   3.9 MiB/s | 347.4 KiB |  00m00s
[237/296] fribidi-0:1.0.13-4.fc40.x86_6 100% |   5.2 MiB/s |  91.2 KiB |  00m00s
[238/296] libthai-0:0.1.29-8.fc40.x86_6 100% |   9.5 MiB/s | 213.8 KiB |  00m00s
[239/296] libdatrie-0:0.2.13-9.fc40.x86 100% |   1.6 MiB/s |  32.0 KiB |  00m00s
[240/296] libXft-devel-0:2.3.8-6.fc40.x 100% |   2.2 MiB/s |  50.2 KiB |  00m00s
[241/296] xorg-x11-proto-devel-0:2024.1 100% |   5.5 MiB/s | 300.6 KiB |  00m00s
[242/296] gcc-gfortran-0:14.0.1-0.15.fc 100% |  13.5 MiB/s |  13.4 MiB |  00m01s
[243/296] fontconfig-devel-0:2.15.0-4.f 100% |   6.4 MiB/s | 165.1 KiB |  00m00s
[244/296] gettext-0:0.22.5-2.fc40.x86_6 100% |  19.7 MiB/s |   1.1 MiB |  00m00s
[245/296] gettext-libs-0:0.22.5-2.fc40. 100% |  11.8 MiB/s | 664.1 KiB |  00m00s
[246/296] gettext-runtime-0:0.22.5-2.fc 100% |   6.7 MiB/s | 122.6 KiB |  00m00s
[247/296] gettext-envsubst-0:0.22.5-2.f 100% |   2.1 MiB/s |  38.0 KiB |  00m00s
[248/296] libXrender-devel-0:0.9.11-6.f 100% | 902.5 KiB/s |  19.0 KiB |  00m00s
[249/296] freetype-devel-0:2.13.2-5.fc4 100% |  23.8 MiB/s | 951.3 KiB |  00m00s
[250/296] libquadmath-devel-0:14.0.1-0. 100% |   2.0 MiB/s |  36.8 KiB |  00m00s
[251/296] annobin-plugin-gcc-0:12.51-1. 100% |  15.4 MiB/s | 960.8 KiB |  00m00s
[252/296] libstdc++-devel-0:14.0.1-0.15 100% |  27.7 MiB/s |   2.7 MiB |  00m00s
[253/296] annobin-docs-0:12.51-1.fc40.n 100% |   1.6 MiB/s |  89.2 KiB |  00m00s
[254/296] glibc-devel-0:2.39-8.fc40.x86 100% |   2.7 MiB/s | 114.9 KiB |  00m00s
[255/296] libxcrypt-devel-0:4.4.36-5.fc 100% |   1.4 MiB/s |  28.6 KiB |  00m00s
[256/296] glibc-headers-x86-0:2.39-8.fc 100% |   9.7 MiB/s | 605.2 KiB |  00m00s
[257/296] brotli-devel-0:1.1.0-3.fc40.x 100% |   1.8 MiB/s |  33.8 KiB |  00m00s
[258/296] brotli-0:1.1.0-3.fc40.x86_64  100% |   1.1 MiB/s |  19.9 KiB |  00m00s
[259/296] harfbuzz-devel-0:8.3.0-5.fc40 100% |  20.0 MiB/s | 450.6 KiB |  00m00s
[260/296] harfbuzz-icu-0:8.3.0-5.fc40.x 100% |   1.0 MiB/s |  16.5 KiB |  00m00s
[261/296] libpng-devel-2:1.6.40-3.fc40. 100% |  14.9 MiB/s | 290.6 KiB |  00m00s
[262/296] cmake-filesystem-0:3.28.2-1.f 100% |   1.1 MiB/s |  17.5 KiB |  00m00s
[263/296] lua-0:5.4.6-5.fc40.x86_64     100% |  10.4 MiB/s | 190.8 KiB |  00m00s
[264/296] libxml2-devel-0:2.12.6-1.fc40 100% |   8.3 MiB/s | 524.7 KiB |  00m00s
[265/296] libX11-xcb-0:1.8.9-1.fc40.x86 100% | 326.0 KiB/s |  11.7 KiB |  00m00s
[266/296] cups-libs-1:2.4.7-13.fc40.x86 100% |   8.7 MiB/s | 258.7 KiB |  00m00s
[267/296] avahi-libs-0:0.8-26.fc40.x86_ 100% |   3.6 MiB/s |  66.5 KiB |  00m00s
[268/296] libxcb-devel-0:1.17.0-1.fc40. 100% |  17.3 MiB/s |   1.4 MiB |  00m00s
[269/296] dbus-libs-1:1.14.10-3.fc40.x8 100% |   7.3 MiB/s | 156.3 KiB |  00m00s
[270/296] nss-softokn-0:3.99.0-1.fc40.x 100% |  12.1 MiB/s | 409.4 KiB |  00m00s
[271/296] nss-0:3.99.0-1.fc40.x86_64    100% |  17.2 MiB/s | 703.6 KiB |  00m00s
[272/296] crypto-policies-scripts-0:202 100% |   6.4 MiB/s | 117.3 KiB |  00m00s
[273/296] nss-softokn-freebl-0:3.99.0-1 100% |  11.8 MiB/s | 385.9 KiB |  00m00s
[274/296] nss-sysinit-0:3.99.0-1.fc40.x 100% | 745.7 KiB/s |  18.6 KiB |  00m00s
[275/296] tzdata-java-0:2024a-5.fc40.no 100% |   1.8 MiB/s |  47.2 KiB |  00m00s
[276/296] kernel-headers-0:6.8.3-300.fc 100% |  19.2 MiB/s |   1.6 MiB |  00m00s
[277/296] python3-packaging-0:23.2-4.fc 100% |   5.1 MiB/s | 125.2 KiB |  00m00s
[278/296] glib2-devel-0:2.80.0-1.fc40.x 100% |  14.9 MiB/s |   1.5 MiB |  00m00s
[279/296] graphite2-devel-0:1.3.14-15.f 100% |   1.3 MiB/s |  20.6 KiB |  00m00s
[280/296] libmount-devel-0:2.40.1-1.fc4 100% | 844.8 KiB/s |  27.0 KiB |  00m00s
[281/296] python3-0:3.12.3-2.fc40.x86_6 100% |   1.1 MiB/s |  27.2 KiB |  00m00s
[282/296] libb2-0:0.98.1-11.fc40.x86_64 100% |   1.6 MiB/s |  25.5 KiB |  00m00s
[283/296] mpdecimal-0:2.5.1-9.fc40.x86_ 100% |   5.1 MiB/s |  88.6 KiB |  00m00s
[284/296] python-pip-wheel-0:23.3.2-1.f 100% |  26.3 MiB/s |   1.5 MiB |  00m00s
[285/296] libffi-devel-0:3.4.4-7.fc40.x 100% |   1.7 MiB/s |  28.2 KiB |  00m00s
[286/296] libselinux-devel-0:3.6-4.fc40 100% |   8.2 MiB/s | 150.9 KiB |  00m00s
[287/296] gcc-0:14.0.1-0.15.fc40.x86_64 100% |  16.8 MiB/s |  37.2 MiB |  00m02s
[288/296] libsepol-devel-0:3.6-3.fc40.x 100% | 855.1 KiB/s |  48.7 KiB |  00m00s
[289/296] sysprof-capture-devel-0:46.0- 100% |   3.1 MiB/s |  53.6 KiB |  00m00s
[290/296] python3-libs-0:3.12.3-2.fc40. 100% |  41.1 MiB/s |   9.1 MiB |  00m00s
[291/296] expat-0:2.6.2-1.fc40.x86_64   100% |   3.2 MiB/s | 113.1 KiB |  00m00s
[292/296] tzdata-0:2024a-5.fc40.noarch  100% |  17.5 MiB/s | 716.1 KiB |  00m00s
[293/296] nss-util-0:3.99.0-1.fc40.x86_ 100% |   3.3 MiB/s |  88.1 KiB |  00m00s
[294/296] nspr-0:4.35.0-22.fc40.x86_64  100% |   5.0 MiB/s | 137.4 KiB |  00m00s
[295/296] libXau-devel-0:1.0.11-6.fc40. 100% | 853.6 KiB/s |  13.7 KiB |  00m00s
[296/296] libblkid-devel-0:2.40.1-1.fc4 100% | 401.4 KiB/s |  26.1 KiB |  00m00s
--------------------------------------------------------------------------------
[296/296] Total                         100% |  49.8 MiB/s | 424.4 MiB |  00m09s
Running transaction
[  1/298] Verify package files          100% | 180.0   B/s | 296.0   B |  00m02s
>>> Running pre-transaction scriptlet: copy-jdk-configs-0:4.1-5.fc40.noarch
>>> Stop pre-transaction scriptlet: copy-jdk-configs-0:4.1-5.fc40.noarch
>>> Running pre-transaction scriptlet: java-21-openjdk-headless-1:21.0.3.0.9-1.f
>>> Stop pre-transaction scriptlet: java-21-openjdk-headless-1:21.0.3.0.9-1.fc40
[  2/298] Prepare transaction           100% | 636.0   B/s | 296.0   B |  00m00s
[  3/298] Installing zlib-ng-compat-dev 100% |  51.0 MiB/s | 104.5 KiB |  00m00s
[  4/298] Installing nspr-0:4.35.0-22.f 100% | 102.3 MiB/s | 314.3 KiB |  00m00s
[  5/298] Installing libgfortran-0:14.0 100% | 245.2 MiB/s |   2.9 MiB |  00m00s
[  6/298] Installing libpng-2:1.6.40-3. 100% | 118.7 MiB/s | 243.1 KiB |  00m00s
[  7/298] Installing nss-util-0:3.99.0- 100% |  73.9 MiB/s | 227.1 KiB |  00m00s
[  8/298] Installing xorg-x11-proto-dev 100% | 111.4 MiB/s |   1.8 MiB |  00m00s
[  9/298] Installing libmpc-0:1.3.1-5.f 100% |  54.1 MiB/s | 166.2 KiB |  00m00s
[ 10/298] Installing libquadmath-0:14.0 100% | 106.5 MiB/s | 327.0 KiB |  00m00s
[ 11/298] Installing libicu-0:74.2-1.fc 100% | 270.9 MiB/s |  34.9 MiB |  00m00s
[ 12/298] Installing fonts-filesystem-1 100% | 384.8 KiB/s | 788.0   B |  00m00s
[ 13/298] Installing tcl-1:8.6.13-2.fc4 100% | 155.8 MiB/s |   4.2 MiB |  00m00s
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[ 15/298] Installing libicu-devel-0:74. 100% | 134.3 MiB/s |   5.6 MiB |  00m00s
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[ 17/298] Installing xz-devel-1:5.4.6-3 100% |  63.5 MiB/s | 259.9 KiB |  00m00s
[ 18/298] Installing bzip2-devel-0:1.0. 100% | 151.7 MiB/s | 310.7 KiB |  00m00s
[ 19/298] Installing libXau-0:1.0.11-6. 100% |  33.4 MiB/s |  68.4 KiB |  00m00s
[ 20/298] Installing libxcb-0:1.17.0-1. 100% | 101.4 MiB/s |   1.1 MiB |  00m00s
[ 21/298] Installing openblas-0:0.3.26- 100% |  47.8 MiB/s |  97.8 KiB |  00m00s
[ 22/298] Installing graphite2-0:1.3.14 100% |  63.2 MiB/s | 194.2 KiB |  00m00s
[ 23/298] Installing libICE-0:1.1.1-3.f 100% |  89.2 MiB/s | 182.6 KiB |  00m00s
[ 24/298] Installing libjpeg-turbo-0:3. 100% | 190.1 MiB/s | 778.6 KiB |  00m00s
[ 25/298] Installing libRmath-0:4.4.0-1 100% | 119.0 MiB/s | 243.6 KiB |  00m00s
[ 26/298] Installing libRmath-devel-0:4 100% |  17.3 MiB/s |  17.7 KiB |  00m00s
[ 27/298] Installing libSM-0:1.2.4-3.fc 100% |  48.2 MiB/s |  98.6 KiB |  00m00s
[ 28/298] Installing graphite2-devel-0: 100% |  49.4 MiB/s |  50.6 KiB |  00m00s
[ 29/298] Installing openblas-openmp-0: 100% | 405.2 MiB/s |  38.9 MiB |  00m00s
[ 30/298] Installing openblas-openmp64- 100% | 403.0 MiB/s |  39.1 MiB |  00m00s
[ 31/298] Installing flexiblas-netlib64 100% | 309.1 MiB/s |  10.5 MiB |  00m00s
[ 32/298] Installing flexiblas-openblas 100% |  39.2 MiB/s |  40.2 KiB |  00m00s
[ 33/298] Installing flexiblas-0:3.4.2- 100% |  47.0 MiB/s |  48.1 KiB |  00m00s
[ 34/298] Installing flexiblas-openblas 100% |  39.2 MiB/s |  40.2 KiB |  00m00s
[ 35/298] Installing flexiblas-netlib-0 100% | 281.1 MiB/s |  10.4 MiB |  00m00s
[ 36/298] Installing suitesparse-0:7.6. 100% | 363.8 MiB/s | 137.2 MiB |  00m00s
[ 37/298] Installing glpk-0:5.0-11.fc40 100% | 141.9 MiB/s | 872.1 KiB |  00m00s
[ 38/298] Installing flexiblas-devel-0: 100% | 359.0 MiB/s |   4.7 MiB |  00m00s
[ 39/298] Installing libXau-devel-0:1.0 100% | 915.4 KiB/s |   8.2 KiB |  00m00s
[ 40/298] Installing libxcb-devel-0:1.1 100% |  33.3 MiB/s |   3.1 MiB |  00m00s
[ 41/298] Installing abattis-cantarell- 100% |  94.9 MiB/s | 194.4 KiB |  00m00s
[ 42/298] Installing cpp-0:14.0.1-0.15. 100% | 291.3 MiB/s |  35.0 MiB |  00m00s
[ 43/298] Installing nss-softokn-freebl 100% | 175.5 MiB/s | 898.8 KiB |  00m00s
[ 44/298] Installing nss-softokn-0:3.99 100% | 232.6 MiB/s |   1.9 MiB |  00m00s
[ 45/298] Installing libpng-devel-2:1.6 100% | 172.9 MiB/s | 885.4 KiB |  00m00s
[ 46/298] Installing libblkid-devel-0:2 100% |   9.0 MiB/s |  46.0 KiB |  00m00s
[ 47/298] Installing tzdata-0:2024a-5.f 100% |  26.8 MiB/s |   1.9 MiB |  00m00s
[ 48/298] Installing expat-0:2.6.2-1.fc 100% |  92.1 MiB/s | 282.9 KiB |  00m00s
[ 49/298] Installing sysprof-capture-de 100% | 124.8 MiB/s | 255.7 KiB |  00m00s
[ 50/298] Installing libsepol-devel-0:3 100% |  31.2 MiB/s | 127.7 KiB |  00m00s
[ 51/298] Installing libffi-devel-0:3.4 100% |  34.1 MiB/s |  34.9 KiB |  00m00s
[ 52/298] Installing python-pip-wheel-0 100% | 380.0 MiB/s |   1.5 MiB |  00m00s
[ 53/298] Installing mpdecimal-0:2.5.1- 100% |  98.6 MiB/s | 202.0 KiB |  00m00s
[ 54/298] Installing libb2-0:0.98.1-11. 100% |   5.3 MiB/s |  43.3 KiB |  00m00s
[ 55/298] Installing python3-libs-0:3.1 100% | 196.9 MiB/s |  41.3 MiB |  00m00s
[ 56/298] Installing python3-0:3.12.3-2 100% |  32.5 MiB/s |  33.3 KiB |  00m00s
[ 57/298] Installing crypto-policies-sc 100% |  53.5 MiB/s | 328.7 KiB |  00m00s
[ 58/298] Installing nss-sysinit-0:3.99 100% |  18.9 MiB/s |  19.3 KiB |  00m00s
[ 59/298] Installing nss-0:3.99.0-1.fc4 100% |  79.1 MiB/s |   1.9 MiB |  00m00s
>>> Running post-install scriptlet: nss-0:3.99.0-1.fc40.x86_64
>>> Stop post-install scriptlet: nss-0:3.99.0-1.fc40.x86_64
[ 60/298] Installing python3-packaging- 100% |  52.7 MiB/s | 431.9 KiB |  00m00s
[ 61/298] Installing kernel-headers-0:6 100% | 112.0 MiB/s |   6.4 MiB |  00m00s
[ 62/298] Installing tzdata-java-0:2024 100% |  99.7 MiB/s | 102.1 KiB |  00m00s
[ 63/298] Installing dbus-libs-1:1.14.1 100% | 120.5 MiB/s | 370.1 KiB |  00m00s
[ 64/298] Installing avahi-libs-0:0.8-2 100% |  55.0 MiB/s | 168.9 KiB |  00m00s
[ 65/298] Installing libX11-xcb-0:1.8.9 100% |  15.5 MiB/s |  15.9 KiB |  00m00s
[ 66/298] Installing lua-0:5.4.6-5.fc40 100% | 146.7 MiB/s | 600.8 KiB |  00m00s
[ 67/298] Installing cmake-filesystem-0 100% |   1.7 MiB/s |   7.1 KiB |  00m00s
[ 68/298] Installing libxml2-devel-0:2. 100% | 213.5 MiB/s |   3.4 MiB |  00m00s
[ 69/298] Installing brotli-0:1.1.0-3.f 100% |  31.7 MiB/s |  32.5 KiB |  00m00s
[ 70/298] Installing brotli-devel-0:1.1 100% |  22.1 MiB/s |  68.0 KiB |  00m00s
[ 71/298] Installing glibc-headers-x86- 100% |  90.2 MiB/s |   2.3 MiB |  00m00s
[ 72/298] Installing libxcrypt-devel-0: 100% |  15.9 MiB/s |  32.6 KiB |  00m00s
[ 73/298] Installing glibc-devel-0:2.39 100% |  19.4 MiB/s |  39.7 KiB |  00m00s
[ 74/298] Installing annobin-docs-0:12. 100% |  31.5 MiB/s |  96.8 KiB |  00m00s
[ 75/298] Installing libstdc++-devel-0: 100% | 222.0 MiB/s |  15.5 MiB |  00m00s
[ 76/298] Installing gettext-envsubst-0 100% |  74.6 MiB/s |  76.4 KiB |  00m00s
[ 77/298] Installing gettext-runtime-0: 100% |  59.9 MiB/s | 490.7 KiB |  00m00s
[ 78/298] Installing gettext-0:0.22.5-2 100% | 218.0 MiB/s |   5.2 MiB |  00m00s
[ 79/298] Installing libdatrie-0:0.2.13 100% |  57.7 MiB/s |  59.0 KiB |  00m00s
[ 80/298] Installing libthai-0:0.1.29-8 100% | 191.7 MiB/s | 785.3 KiB |  00m00s
[ 81/298] Installing fribidi-0:1.0.13-4 100% | 119.7 MiB/s | 367.8 KiB |  00m00s
[ 82/298] Installing pcre2-utf32-0:10.4 100% | 265.1 MiB/s | 543.0 KiB |  00m00s
[ 83/298] Installing pcre2-utf16-0:10.4 100% | 185.9 MiB/s | 571.0 KiB |  00m00s
[ 84/298] Installing pcre2-devel-0:10.4 100% | 148.2 MiB/s |   1.9 MiB |  00m00s
[ 85/298] Installing libselinux-devel-0 100% |  17.4 MiB/s | 160.6 KiB |  00m00s
[ 86/298] Installing libmount-devel-0:2 100% |  63.0 MiB/s |  64.5 KiB |  00m00s
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[ 88/298] Installing libfontenc-0:1.1.7 100% |  64.8 MiB/s |  66.4 KiB |  00m00s
[ 89/298] Installing lua-posix-0:36.2.1 100% |  75.0 MiB/s | 614.7 KiB |  00m00s
[ 90/298] Installing copy-jdk-configs-0 100% |  20.5 MiB/s |  21.0 KiB |  00m00s
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[ 92/298] Installing javapackages-files 100% |   2.6 MiB/s |   5.3 KiB |  00m00s
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[100/298] Installing gnutls-0:3.8.5-1.f 100% | 228.6 MiB/s |   3.2 MiB |  00m00s
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[105/298] Installing cups-libs-1:2.4.7- 100% | 121.2 MiB/s | 620.3 KiB |  00m00s
[106/298] Installing java-21-openjdk-he 100% | 327.5 MiB/s | 205.0 MiB |  00m01s
>>> Running post-install scriptlet: java-21-openjdk-headless-1:21.0.3.0.9-1.fc40
>>> Stop post-install scriptlet: java-21-openjdk-headless-1:21.0.3.0.9-1.fc40.x8
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[121/298] Installing gcc-0:14.0.1-0.15. 100% | 301.5 MiB/s | 104.0 MiB |  00m00s
>>> Running trigger-install scriptlet: redhat-rpm-config-0:286-1.fc40.noarch
>>> Stop trigger-install scriptlet: redhat-rpm-config-0:286-1.fc40.noarch
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>>> Running pre-install scriptlet: xml-common-0:0.6.3-63.fc40.noarch
>>> Stop pre-install scriptlet: xml-common-0:0.6.3-63.fc40.noarch
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[126/298] Installing cairo-0:1.18.0-3.f 100% | 192.4 MiB/s |   1.7 MiB |  00m00s
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>>> Running post-install scriptlet: fontconfig-0:2.15.0-4.fc40.x86_64
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>>> Running pre-install scriptlet: tk-1:8.6.13-3.fc40.x86_64
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[132/298] Installing pango-0:1.52.2-1.f 100% |  51.5 MiB/s |   1.0 MiB |  00m00s
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>>> Running post-install scriptlet: xorg-x11-fonts-Type1-0:7.5-38.fc40.noarch
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>>> Running post-install scriptlet: java-21-openjdk-1:21.0.3.0.9-1.fc40.x86_64
>>> Stop post-install scriptlet: java-21-openjdk-1:21.0.3.0.9-1.fc40.x86_64
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>>> Running post-install scriptlet: java-21-openjdk-devel-1:21.0.3.0.9-1.fc40.x8
>>> Stop post-install scriptlet: java-21-openjdk-devel-1:21.0.3.0.9-1.fc40.x86_6
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[278/298] Installing R-CRAN-plotly-0:4. 100% | 137.6 MiB/s |   6.7 MiB |  00m00s
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[297/298] Installing gcc-plugin-annobin 100% |   2.4 MiB/s |  58.6 KiB |  00m00s
>>> Running trigger-install scriptlet: redhat-rpm-config-0:286-1.fc40.noarch
>>> Stop trigger-install scriptlet: redhat-rpm-config-0:286-1.fc40.noarch
[298/298] Installing annobin-plugin-gcc 100% |   1.1 MiB/s | 972.4 KiB |  00m01s
>>> Running trigger-install scriptlet: redhat-rpm-config-0:286-1.fc40.noarch
>>> Stop trigger-install scriptlet: redhat-rpm-config-0:286-1.fc40.noarch
>>> Running post-transaction scriptlet: crypto-policies-scripts-0:20240201-2.git
>>> Stop post-transaction scriptlet: crypto-policies-scripts-0:20240201-2.git9f5
>>> Running post-transaction scriptlet: nss-0:3.99.0-1.fc40.x86_64
>>> Stop post-transaction scriptlet: nss-0:3.99.0-1.fc40.x86_64
>>> Running post-transaction scriptlet: copy-jdk-configs-0:4.1-5.fc40.noarch
>>> Stop post-transaction scriptlet: copy-jdk-configs-0:4.1-5.fc40.noarch
>>> Running post-transaction scriptlet: java-21-openjdk-headless-1:21.0.3.0.9-1.
>>> Stop post-transaction scriptlet: java-21-openjdk-headless-1:21.0.3.0.9-1.fc4
>>> Running post-transaction scriptlet: fontconfig-0:2.15.0-4.fc40.x86_64
>>> Stop post-transaction scriptlet: fontconfig-0:2.15.0-4.fc40.x86_64
>>> Running post-transaction scriptlet: java-21-openjdk-1:21.0.3.0.9-1.fc40.x86_
>>> Stop post-transaction scriptlet: java-21-openjdk-1:21.0.3.0.9-1.fc40.x86_64
>>> Running post-transaction scriptlet: java-21-openjdk-devel-1:21.0.3.0.9-1.fc4
>>> Stop post-transaction scriptlet: java-21-openjdk-devel-1:21.0.3.0.9-1.fc40.x
>>> Running trigger-install scriptlet: glibc-common-0:2.39-8.fc40.x86_64
>>> Stop trigger-install scriptlet: glibc-common-0:2.39-8.fc40.x86_64
>>> Running trigger-install scriptlet: info-0:7.1-2.fc40.x86_64
>>> Stop trigger-install scriptlet: info-0:7.1-2.fc40.x86_64
>>> Running trigger-install scriptlet: glib2-0:2.80.0-1.fc40.x86_64
>>> Stop trigger-install scriptlet: glib2-0:2.80.0-1.fc40.x86_64
>>> Running trigger-install scriptlet: glib2-0:2.80.0-1.fc40.x86_64
>>> Stop trigger-install scriptlet: glib2-0:2.80.0-1.fc40.x86_64
>>> Running trigger-install scriptlet: desktop-file-utils-0:0.26-12.fc40.x86_64
>>> Stop trigger-install scriptlet: desktop-file-utils-0:0.26-12.fc40.x86_64
>>> Running trigger-install scriptlet: fontconfig-0:2.15.0-4.fc40.x86_64
>>> Stop trigger-install scriptlet: fontconfig-0:2.15.0-4.fc40.x86_64
Warning: skipped PGP checks for 139 package(s).
Finish: build setup for R-CRAN-Seurat-5.1.0-1.fc40.copr7435327.src.rpm
Start: rpmbuild R-CRAN-Seurat-5.1.0-1.fc40.copr7435327.src.rpm
warning: source_date_epoch_from_changelog set but %changelog is missing
Building target platforms: x86_64
Building for target x86_64
Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.IMZAiN
+ umask 022
+ cd /builddir/build/BUILD
+ cd /builddir/build/BUILD
+ rm -rf Seurat
+ /usr/bin/mkdir -p Seurat
+ cd Seurat
+ /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/Seurat_5.1.0.tar.gz
+ STATUS=0
+ '[' 0 -ne 0 ']'
+ rm -rf /builddir/build/BUILD/Seurat-SPECPARTS
+ /usr/bin/mkdir -p /builddir/build/BUILD/Seurat-SPECPARTS
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w .
+ find -type f -executable -exec grep -Iq . '{}' ';' -exec sed -i -e '$a\' '{}' ';'
+ '[' -d Seurat/src ']'
+ find Seurat/src -type f -exec sed -i s@/usr/bin/strip@/usr/bin/true@g '{}' ';'
+ '[' -d Seurat/src ']'
+ find Seurat/src/Makevars -type f -exec sed -i s@-g0@@g '{}' ';'
+ find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' '{}' ';'
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.SeaCMh
+ umask 022
+ cd /builddir/build/BUILD
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd Seurat
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.CaqFIO
+ umask 022
+ cd /builddir/build/BUILD
+ '[' /builddir/build/BUILDROOT/R-CRAN-Seurat-5.1.0-1.fc40.copr7435327.x86_64 '!=' / ']'
+ rm -rf /builddir/build/BUILDROOT/R-CRAN-Seurat-5.1.0-1.fc40.copr7435327.x86_64
++ dirname /builddir/build/BUILDROOT/R-CRAN-Seurat-5.1.0-1.fc40.copr7435327.x86_64
+ mkdir -p /builddir/build/BUILDROOT
+ mkdir /builddir/build/BUILDROOT/R-CRAN-Seurat-5.1.0-1.fc40.copr7435327.x86_64
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd Seurat
+ mkdir -p /builddir/build/BUILDROOT/R-CRAN-Seurat-5.1.0-1.fc40.copr7435327.x86_64/usr/local/lib/R/library
+ /usr/bin/R CMD INSTALL -l /builddir/build/BUILDROOT/R-CRAN-Seurat-5.1.0-1.fc40.copr7435327.x86_64/usr/local/lib/R/library Seurat
* installing *source* package ‘Seurat’ ...
files ‘tests/testdata/visium_hd/binned_outputs/square_008um/spatial/scalefactors_json.json’, ‘tests/testdata/visium_hd/binned_outputs/square_016um/spatial/scalefactors_json.json’ have the wrong MD5 checksums
** using staged installation
** libs
using C compiler: ‘gcc (GCC) 14.0.1 20240411 (Red Hat 14.0.1-0)’
using C++ compiler: ‘g++ (GCC) 14.0.1 20240411 (Red Hat 14.0.1-0)’
using C++17
g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG  -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppEigen/include' -I'/usr/local/lib/R/library/RcppProgress/include' -I/usr/local/include    -fpic  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer    -c ModularityOptimizer.cpp -o ModularityOptimizer.o
ModularityOptimizer.cpp: In constructor ‘ModularityOptimizer::Network::Network(int, DVector*, std::vector<std::vector<int> >&, DVector*)’:
ModularityOptimizer.cpp:204:3: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation]
  204 |   for (size_t j = 0; j < edge[0].size(); j++)
      |   ^~~
ModularityOptimizer.cpp:216:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’
  216 |     for (; i <= nNodes; i++)
      |     ^~~
ModularityOptimizer.cpp: In member function ‘ModularityOptimizer::Clustering ModularityOptimizer::Network::identifyComponents()’:
ModularityOptimizer.cpp:387:9: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation]
  387 |         for (int l = firstNeighborIndex[node[k]]; l < firstNeighborIndex[node[k] + 1]; l++)
      |         ^~~
ModularityOptimizer.cpp:395:11: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’
  395 |           k++;
      |           ^
ModularityOptimizer.cpp:377:3: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation]
  377 |   for (int i = 0; i < nNodes; i++)
      |   ^~~
ModularityOptimizer.cpp:399:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’
  399 |     clustering.orderClustersByNNodes();
      |     ^~~~~~~~~~
ModularityOptimizer.cpp: In member function ‘ModularityOptimizer::Network ModularityOptimizer::Network::createSubnetwork(const ModularityOptimizer::Clustering&, int, IVector&, IVector&, IVector&, DVector&) const’:
ModularityOptimizer.cpp:429:7: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation]
  429 |       for (int k = firstNeighborIndex[j]; k < firstNeighborIndex[j + 1]; k++)
      |       ^~~
ModularityOptimizer.cpp:436:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’
  436 |         subnetwork.firstNeighborIndex[i + 1] = subnetwork.nEdges;
      |         ^~~~~~~~~~
ModularityOptimizer.cpp: In member function ‘int ModularityOptimizer::VOSClusteringTechnique::removeCluster(int)’:
ModularityOptimizer.cpp:710:3: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation]
  710 |   for (int j = 0; j < clustering->nClusters; j++)
      |   ^~~
ModularityOptimizer.cpp:721:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’
  721 |     if (i >= 0)
      |     ^~
ModularityOptimizer.cpp:723:7: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation]
  723 |       for (int j = 0; j < network->nNodes; j++)
      |       ^~~
ModularityOptimizer.cpp:726:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’
  726 |         if (cluster == clustering->nClusters - 1)
      |         ^~
ModularityOptimizer.cpp: In member function ‘void ModularityOptimizer::VOSClusteringTechnique::removeSmallClusters(int)’:
ModularityOptimizer.cpp:740:5: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation]
  740 |     for (int k = 0; k < vosClusteringTechnique.clustering->nClusters; k++)
      |     ^~~
ModularityOptimizer.cpp:747:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’
  747 |       if (i >= 0)
      |       ^~
ModularityOptimizer.cpp: In function ‘std::shared_ptr<ModularityOptimizer::Network> ModularityOptimizer::matrixToNetwork(IVector&, IVector&, DVector&, int, int)’:
ModularityOptimizer.cpp:764:3: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation]
  764 |   for (size_t i = 0; i < node1.size(); i++)
      |   ^~~
ModularityOptimizer.cpp:771:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’
  771 |     IVector firstNeighborIndex(nNodes + 1);
      |     ^~~~~~~
ModularityOptimizer.cpp:783:5: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation]
  783 |     for (size_t i = 0; i < node1.size(); i++)
      |     ^~~
ModularityOptimizer.cpp:796:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’
  796 |       if (modularityFunction == 1)
      |       ^~
ModularityOptimizer.cpp:761:7: warning: unused variable ‘n1_max’ [-Wunused-variable]
  761 |   int n1_max = *std::max_element(node1.cbegin(), node1.cend());
      |       ^~~~~~
ModularityOptimizer.cpp:762:7: warning: unused variable ‘n2_max’ [-Wunused-variable]
  762 |   int n2_max = *std::max_element(node2.cbegin(), node2.cend());
      |       ^~~~~~
g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG  -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppEigen/include' -I'/usr/local/lib/R/library/RcppProgress/include' -I/usr/local/include    -fpic  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer    -c RModularityOptimizer.cpp -o RModularityOptimizer.o
In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:205,
                 from /usr/local/lib/R/library/RcppEigen/include/Eigen/Dense:1,
                 from /usr/local/lib/R/library/RcppEigen/include/RcppEigenForward.h:28,
                 from /usr/local/lib/R/library/RcppEigen/include/RcppEigen.h:25,
                 from RModularityOptimizer.cpp:9:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
   46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i;
      |                                        ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
   47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b;
      |                                        ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes]
   49 | template<> struct is_arithmetic<__m128>  { enum { value = true }; };
      |                                       ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
   50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; };
      |                                        ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes]
   51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; };
      |                                        ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
  222 | template<> struct unpacket_traits<Packet4f> {
      |                                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
  228 | template<> struct unpacket_traits<Packet2d> {
      |                                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
 1124 | ptranspose(PacketBlock<Packet4f,4>& kernel) {
      |                                  ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
 1129 | ptranspose(PacketBlock<Packet2d,2>& kernel) {
      |                                  ^
In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:174:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
   16 |   struct conj_helper<PACKET_REAL, PACKET_CPLX, false, false> {          \
      |                                                            ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
   29 |   struct conj_helper<PACKET_CPLX, PACKET_REAL, false, false> {          \
      |                                                            ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
   16 |   struct conj_helper<PACKET_REAL, PACKET_CPLX, false, false> {          \
      |                                                            ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
   29 |   struct conj_helper<PACKET_CPLX, PACKET_REAL, false, false> {          \
      |                                                            ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:165:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<float, 4>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits<Eigen::Matrix<float, 4, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning:    22 |   typedef typename find_best_packet<_Scalar,size>::type PacketScalar;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning:       |                                                         ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49:   required from ‘struct Eigen::internal::traits<Eigen::Quaternion<float> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning:   266 |     Alignment = internal::traits<Coefficients>::Alignment,
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning:       |                                                 ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning:    24 |     ResAlignment = traits<Quaternion<float> >::Alignment
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning:       |                                              ^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
  208 |   typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
      |                                                                                        ^~~~
In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:271:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:   302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 3>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:   555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<float, 4, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<float, 4, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<float, 4, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<float, 4, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:   178 | class Matrix
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50:   required from ‘class Eigen::QuaternionBase<Eigen::Quaternion<float> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    46 |   typedef typename Coefficients::CoeffReturnType CoeffReturnType;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |                                                  ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7:   required from ‘class Eigen::Quaternion<float>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:   273 | class Quaternion : public QuaternionBase<Quaternion<_Scalar,_Options> >
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    27 |   {
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |   ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 4>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 4, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    22 |   typedef typename find_best_packet<_Scalar,size>::type PacketScalar;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                         ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49:   required from ‘struct Eigen::internal::traits<Eigen::Quaternion<double> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   266 |     Alignment = internal::traits<Coefficients>::Alignment,
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                 ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    98 |     ResAlignment = traits<Quaternion<double> >::Alignment
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                               ^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  208 |   typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
      |                                                                                        ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:   302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 3>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:   555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<double, 4, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, 4, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, 4, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<double, 4, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:   178 | class Matrix
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50:   required from ‘class Eigen::QuaternionBase<Eigen::Quaternion<double> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    46 |   typedef typename Coefficients::CoeffReturnType CoeffReturnType;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |                                                  ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7:   required from ‘class Eigen::Quaternion<double>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:   273 | class Quaternion : public QuaternionBase<Quaternion<_Scalar,_Options> >
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:   102 |   {
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |   ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/SparseCore:37,
                 from /usr/local/lib/R/library/RcppEigen/include/Eigen/Sparse:26,
                 from /usr/local/lib/R/library/RcppEigen/include/RcppEigenForward.h:29:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::SparseMatrix<double, 0, int> >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7:   required from ‘class Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 0, int> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    36 | class SparseCompressedBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7:   required from ‘class Eigen::SparseMatrix<double, 0, int>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    96 | class SparseMatrix
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    61 |   typedef Triplet<double> T;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                         ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   47 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
RModularityOptimizer.cpp: In function ‘Rcpp::IntegerVector RunModularityClusteringCpp(Eigen::SparseMatrix<double, 0, int>, int, double, int, int, int, int, bool, std::string)’:
RModularityOptimizer.cpp:163:5: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation]
  163 |     else
      |     ^~~~
RModularityOptimizer.cpp:165:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’
  165 |       Rprintf("Number of communities: %d\n", clustering->getNClusters());
      |       ^~~~~~~
g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG  -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppEigen/include' -I'/usr/local/lib/R/library/RcppProgress/include' -I/usr/local/include    -fpic  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer    -c RcppExports.cpp -o RcppExports.o
In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:205,
                 from /usr/local/lib/R/library/RcppEigen/include/Eigen/Dense:1,
                 from /usr/local/lib/R/library/RcppEigen/include/RcppEigenForward.h:28,
                 from /usr/local/lib/R/library/RcppEigen/include/RcppEigen.h:25,
                 from RcppExports.cpp:4:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
   46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i;
      |                                        ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
   47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b;
      |                                        ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes]
   49 | template<> struct is_arithmetic<__m128>  { enum { value = true }; };
      |                                       ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
   50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; };
      |                                        ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes]
   51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; };
      |                                        ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
  222 | template<> struct unpacket_traits<Packet4f> {
      |                                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
  228 | template<> struct unpacket_traits<Packet2d> {
      |                                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
 1124 | ptranspose(PacketBlock<Packet4f,4>& kernel) {
      |                                  ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
 1129 | ptranspose(PacketBlock<Packet2d,2>& kernel) {
      |                                  ^
In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:174:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
   16 |   struct conj_helper<PACKET_REAL, PACKET_CPLX, false, false> {          \
      |                                                            ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
   29 |   struct conj_helper<PACKET_CPLX, PACKET_REAL, false, false> {          \
      |                                                            ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
   16 |   struct conj_helper<PACKET_REAL, PACKET_CPLX, false, false> {          \
      |                                                            ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
   29 |   struct conj_helper<PACKET_CPLX, PACKET_REAL, false, false> {          \
      |                                                            ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:165:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<float, 4>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits<Eigen::Matrix<float, 4, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning:    22 |   typedef typename find_best_packet<_Scalar,size>::type PacketScalar;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning:       |                                                         ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49:   required from ‘struct Eigen::internal::traits<Eigen::Quaternion<float> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning:   266 |     Alignment = internal::traits<Coefficients>::Alignment,
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning:       |                                                 ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning:    24 |     ResAlignment = traits<Quaternion<float> >::Alignment
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning:       |                                              ^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
  208 |   typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
      |                                                                                        ^~~~
In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:271:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:   302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 3>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:   555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<float, 4, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<float, 4, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<float, 4, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<float, 4, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:   178 | class Matrix
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50:   required from ‘class Eigen::QuaternionBase<Eigen::Quaternion<float> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    46 |   typedef typename Coefficients::CoeffReturnType CoeffReturnType;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |                                                  ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7:   required from ‘class Eigen::Quaternion<float>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:   273 | class Quaternion : public QuaternionBase<Quaternion<_Scalar,_Options> >
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    27 |   {
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |   ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 4>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 4, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    22 |   typedef typename find_best_packet<_Scalar,size>::type PacketScalar;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                         ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49:   required from ‘struct Eigen::internal::traits<Eigen::Quaternion<double> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   266 |     Alignment = internal::traits<Coefficients>::Alignment,
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                 ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    98 |     ResAlignment = traits<Quaternion<double> >::Alignment
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                               ^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  208 |   typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
      |                                                                                        ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:   302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 3>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:   555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<double, 4, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, 4, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, 4, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<double, 4, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:   178 | class Matrix
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50:   required from ‘class Eigen::QuaternionBase<Eigen::Quaternion<double> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    46 |   typedef typename Coefficients::CoeffReturnType CoeffReturnType;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |                                                  ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7:   required from ‘class Eigen::Quaternion<double>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:   273 | class Quaternion : public QuaternionBase<Quaternion<_Scalar,_Options> >
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:   102 |   {
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |   ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/SparseCore:37,
                 from /usr/local/lib/R/library/RcppEigen/include/Eigen/Sparse:26,
                 from /usr/local/lib/R/library/RcppEigen/include/RcppEigenForward.h:29:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::SparseMatrix<double, 0, int> >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7:   required from ‘class Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 0, int> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    36 | class SparseCompressedBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7:   required from ‘class Eigen::SparseMatrix<double, 0, int>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    96 | class SparseMatrix
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    61 |   typedef Triplet<double> T;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                         ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   47 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::SparseMatrix<double, 1> >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7:   required from ‘class Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:    36 | class SparseCompressedBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7:   required from ‘class Eigen::SparseMatrix<double, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:    96 | class SparseMatrix
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |       ^~~~~~~~~~~~
RcppExports.cpp:71:105:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:    71 |     rcpp_result_gen = Rcpp::wrap(RowMergeMatrices(mat1, mat2, mat1_rownames, mat2_rownames, all_rownames));
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |                                                                                                         ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   47 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, -1>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, -1, -1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:    22 |   typedef typename find_best_packet<_Scalar,size>::type PacketScalar;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |                                                         ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Map.h:18:8:   required from ‘struct Eigen::internal::traits<Eigen::Map<Eigen::Matrix<double, -1, -1> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:    18 | struct traits<Map<PlainObjectType, MapOptions, StrideType> >
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:32:48:   required from ‘struct Eigen::internal::accessors_level<Eigen::Map<Eigen::Matrix<double, -1, -1> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:    32 |   enum { has_direct_access = (traits<Derived>::Flags & DirectAccessBit) ? 1 : 0,
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |                                                ^~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:111:75:   required from ‘class Eigen::Map<Eigen::Matrix<double, -1, -1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:   111 |          int Level = internal::accessors_level<Derived>::has_write_access ? WriteAccessors : ReadOnlyAccessors
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |                                                          ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RcppExports.cpp:94:67:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:    94 |     rcpp_result_gen = Rcpp::wrap(Standardize(mat, display_progress));
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |                                                                   ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  208 |   typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
      |                                                                                        ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1>, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:   302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1>, 3>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:   555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<double, -1, -1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, -1, -1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, -1, -1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<double, -1, -1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:   178 | class Matrix
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Map.h:24:49:   required from ‘struct Eigen::internal::traits<Eigen::Map<Eigen::Matrix<double, -1, -1> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    24 |                              ? PlainObjectType::ColsAtCompileTime
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |                                                 ^~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:32:48:   required from ‘struct Eigen::internal::accessors_level<Eigen::Map<Eigen::Matrix<double, -1, -1> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    32 |   enum { has_direct_access = (traits<Derived>::Flags & DirectAccessBit) ? 1 : 0,
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |                                                ^~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:111:75:   required from ‘class Eigen::Map<Eigen::Matrix<double, -1, -1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:   111 |          int Level = internal::accessors_level<Derived>::has_write_access ? WriteAccessors : ReadOnlyAccessors
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |                                                          ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RcppExports.cpp:94:67:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    94 |     rcpp_result_gen = Rcpp::wrap(Standardize(mat, display_progress));
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |                                                                   ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 3>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Map<Eigen::Matrix<double, -1, -1> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<double, -1, -1> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34:   required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34:   required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   223 | template<typename Derived> class MapBase<Derived, WriteAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79:   required from ‘class Eigen::Map<Eigen::Matrix<double, -1, -1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    94 | template<typename PlainObjectType, int MapOptions, typename StrideType> class Map
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                                               ^~~
RcppExports.cpp:94:67:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    94 |     rcpp_result_gen = Rcpp::wrap(Standardize(mat, display_progress));
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                                   ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, 1>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, 1>, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, 1>, 3>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<double, -1, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, -1, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, -1, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<double, -1, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   178 | class Matrix
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~
RcppExports.cpp:169:45:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   169 |     rcpp_result_gen = Rcpp::wrap(FastExpMean(mat, display_progress));
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::SparseMatrix<double, 0, int>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:336:80:   required from ‘struct Eigen::internal::evaluator<Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 0, int> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   336 |   typedef typename DenseCoeffsBase<Derived,ReadOnlyAccessors>::CoeffReturnType CoeffReturnType;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                                                ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1505:8:   required from ‘struct Eigen::internal::evaluator<Eigen::SparseMatrix<double, 0, int> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:  1505 | struct evaluator<SparseMatrix<_Scalar,_Options,_StorageIndex> >
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseAssign.h:77:20:   required from ‘void Eigen::internal::assign_sparse_to_sparse(DstXprType&, const SrcXprType&) [with DstXprType = Eigen::SparseMatrix<double, 0, int>; SrcXprType = Eigen::SparseMatrix<double, 0, int>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    77 |   SrcEvaluatorType srcEvaluator(src);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                    ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseAssign.h:132:28:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Sparse2Sparse>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<typename DstXprType::Scalar, typename SrcXprType::Scalar>&) [with DstXprType = Eigen::SparseMatrix<double, 0, int>; SrcXprType = Eigen::SparseMatrix<double, 0, int>; Functor = Eigen::internal::assign_op<double, double>; typename DstXprType::Scalar = double; typename SrcXprType::Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   132 |     assign_sparse_to_sparse(dst.derived(), src.derived());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |     ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::SparseMatrix<double, 0, int>; Src = Eigen::SparseMatrix<double, 0, int>; Func = assign_op<double, double>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:917:27:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:713:13:   required from ‘Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::SparseMatrix(const Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>&) [with _Scalar = double; int _Options = 0; _StorageIndex = int]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   713 |       *this = other.derived();
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ~~~~~~^~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/RcppEigenWrap.h:387:24:   required from ‘Eigen::SparseMatrix<Scalar> Rcpp::traits::Exporter<Eigen::SparseMatrix<Scalar> >::get() [with T = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   387 |                 return ans;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                        ^~~
/usr/local/lib/R/library/Rcpp/include/Rcpp/as.h:89:32:   required from ‘T Rcpp::internal::as(SEXP, Rcpp::traits::r_type_generic_tag) [with T = Eigen::SparseMatrix<double, 0, int>; SEXP = SEXPREC*]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    89 |             return exporter.get();
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                    ~~~~~~~~~~~~^~
/usr/local/lib/R/library/Rcpp/include/Rcpp/as.h:152:31:   required from ‘T Rcpp::as(SEXP) [with T = Eigen::SparseMatrix<double, 0, int>; SEXP = SEXPREC*]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   152 |         return internal::as<T>(x, typename traits::r_type_traits<T>::r_category());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/Rcpp/include/Rcpp/InputParameter.h:34:43:   required from ‘Rcpp::InputParameter<T>::operator T() [with T = Eigen::SparseMatrix<double, 0, int>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    34 |         inline operator T() { return as<T>(x) ; }
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                      ~~~~~^~~
RcppExports.cpp:29:60:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    29 |     rcpp_result_gen = Rcpp::wrap(RunModularityClusteringCpp(SNN, modularityFunction, resolution, algorithm, nRandomStarts, nIterations, randomSeed, printOutput, edgefilename));
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::SparseMatrix<double, 1>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:336:80:   required from ‘struct Eigen::internal::evaluator<Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 1> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   336 |   typedef typename DenseCoeffsBase<Derived,ReadOnlyAccessors>::CoeffReturnType CoeffReturnType;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                                                ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1505:8:   required from ‘struct Eigen::internal::evaluator<Eigen::SparseMatrix<double, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:  1505 | struct evaluator<SparseMatrix<_Scalar,_Options,_StorageIndex> >
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseAssign.h:77:20:   required from ‘void Eigen::internal::assign_sparse_to_sparse(DstXprType&, const SrcXprType&) [with DstXprType = Eigen::SparseMatrix<double, 1>; SrcXprType = Eigen::SparseMatrix<double, 1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    77 |   SrcEvaluatorType srcEvaluator(src);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                    ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseAssign.h:132:28:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Sparse2Sparse>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<typename DstXprType::Scalar, typename SrcXprType::Scalar>&) [with DstXprType = Eigen::SparseMatrix<double, 1>; SrcXprType = Eigen::SparseMatrix<double, 1>; Functor = Eigen::internal::assign_op<double, double>; typename DstXprType::Scalar = double; typename SrcXprType::Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   132 |     assign_sparse_to_sparse(dst.derived(), src.derived());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |     ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::SparseMatrix<double, 1>; Src = Eigen::SparseMatrix<double, 1>; Func = assign_op<double, double>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:917:27:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:713:13:   required from ‘Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::SparseMatrix(const Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>&) [with _Scalar = double; int _Options = 1; _StorageIndex = int]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   713 |       *this = other.derived();
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ~~~~~~^~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/RcppEigenWrap.h:412:24:   required from ‘Eigen::SparseMatrix<_Scalar, 1> Rcpp::traits::Exporter<Eigen::SparseMatrix<_Scalar, 1> >::get() [with T = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   412 |                 return ans;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                        ^~~
/usr/local/lib/R/library/Rcpp/include/Rcpp/as.h:89:32:   required from ‘T Rcpp::internal::as(SEXP, Rcpp::traits::r_type_generic_tag) [with T = Eigen::SparseMatrix<double, 1>; SEXP = SEXPREC*]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    89 |             return exporter.get();
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                    ~~~~~~~~~~~~^~
/usr/local/lib/R/library/Rcpp/include/Rcpp/as.h:152:31:   required from ‘T Rcpp::as(SEXP) [with T = Eigen::SparseMatrix<double, 1>; SEXP = SEXPREC*]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   152 |         return internal::as<T>(x, typename traits::r_type_traits<T>::r_category());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/Rcpp/include/Rcpp/InputParameter.h:34:43:   required from ‘Rcpp::InputParameter<T>::operator T() [with T = Eigen::SparseMatrix<double, 1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    34 |         inline operator T() { return as<T>(x) ; }
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                      ~~~~~^~~
RcppExports.cpp:71:50:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    71 |     rcpp_result_gen = Rcpp::wrap(RowMergeMatrices(mat1, mat2, mat1_rownames, mat2_rownames, all_rownames));
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG  -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppEigen/include' -I'/usr/local/lib/R/library/RcppProgress/include' -I/usr/local/include    -fpic  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer    -c data_manipulation.cpp -o data_manipulation.o
In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:205,
                 from /usr/local/lib/R/library/RcppEigen/include/Eigen/Dense:1,
                 from /usr/local/lib/R/library/RcppEigen/include/RcppEigenForward.h:28,
                 from /usr/local/lib/R/library/RcppEigen/include/RcppEigen.h:25,
                 from data_manipulation.cpp:1:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
   46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i;
      |                                        ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
   47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b;
      |                                        ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes]
   49 | template<> struct is_arithmetic<__m128>  { enum { value = true }; };
      |                                       ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
   50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; };
      |                                        ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes]
   51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; };
      |                                        ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
  222 | template<> struct unpacket_traits<Packet4f> {
      |                                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
  228 | template<> struct unpacket_traits<Packet2d> {
      |                                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
 1124 | ptranspose(PacketBlock<Packet4f,4>& kernel) {
      |                                  ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
 1129 | ptranspose(PacketBlock<Packet2d,2>& kernel) {
      |                                  ^
In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:174:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
   16 |   struct conj_helper<PACKET_REAL, PACKET_CPLX, false, false> {          \
      |                                                            ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
   29 |   struct conj_helper<PACKET_CPLX, PACKET_REAL, false, false> {          \
      |                                                            ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
   16 |   struct conj_helper<PACKET_REAL, PACKET_CPLX, false, false> {          \
      |                                                            ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
   29 |   struct conj_helper<PACKET_CPLX, PACKET_REAL, false, false> {          \
      |                                                            ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:165:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<float, 4>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits<Eigen::Matrix<float, 4, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning:    22 |   typedef typename find_best_packet<_Scalar,size>::type PacketScalar;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning:       |                                                         ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49:   required from ‘struct Eigen::internal::traits<Eigen::Quaternion<float> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning:   266 |     Alignment = internal::traits<Coefficients>::Alignment,
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning:       |                                                 ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning:    24 |     ResAlignment = traits<Quaternion<float> >::Alignment
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning:       |                                              ^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
  208 |   typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
      |                                                                                        ^~~~
In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:271:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:   302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 3>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:   555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<float, 4, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<float, 4, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<float, 4, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<float, 4, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:   178 | class Matrix
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50:   required from ‘class Eigen::QuaternionBase<Eigen::Quaternion<float> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    46 |   typedef typename Coefficients::CoeffReturnType CoeffReturnType;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |                                                  ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7:   required from ‘class Eigen::Quaternion<float>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:   273 | class Quaternion : public QuaternionBase<Quaternion<_Scalar,_Options> >
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    27 |   {
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |   ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 4>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 4, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    22 |   typedef typename find_best_packet<_Scalar,size>::type PacketScalar;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                         ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49:   required from ‘struct Eigen::internal::traits<Eigen::Quaternion<double> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   266 |     Alignment = internal::traits<Coefficients>::Alignment,
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                 ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    98 |     ResAlignment = traits<Quaternion<double> >::Alignment
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                               ^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  208 |   typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
      |                                                                                        ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:   302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 3>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:   555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<double, 4, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, 4, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, 4, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<double, 4, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:   178 | class Matrix
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50:   required from ‘class Eigen::QuaternionBase<Eigen::Quaternion<double> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    46 |   typedef typename Coefficients::CoeffReturnType CoeffReturnType;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |                                                  ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7:   required from ‘class Eigen::Quaternion<double>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:   273 | class Quaternion : public QuaternionBase<Quaternion<_Scalar,_Options> >
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:   102 |   {
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |   ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/SparseCore:37,
                 from /usr/local/lib/R/library/RcppEigen/include/Eigen/Sparse:26,
                 from /usr/local/lib/R/library/RcppEigen/include/RcppEigenForward.h:29:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::SparseMatrix<double, 0, int> >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7:   required from ‘class Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 0, int> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    36 | class SparseCompressedBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7:   required from ‘class Eigen::SparseMatrix<double, 0, int>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    96 | class SparseMatrix
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    61 |   typedef Triplet<double> T;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                         ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   47 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, -1>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, -1, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:    22 |   typedef typename find_best_packet<_Scalar,size>::type PacketScalar;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |                                                         ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, -1, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:    98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |       ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<double, -1, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:   178 | class Matrix
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |       ^~~~~~
data_manipulation.cpp:18:21:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:    18 |     Eigen::VectorXd colSums = data.transpose() * Eigen::VectorXd::Ones(data.rows());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |                     ^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  208 |   typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
      |                                                                                        ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, 1>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, 1>, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:   302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, 1>, 3>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:   555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<double, -1, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, -1, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, -1, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<double, -1, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:   178 | class Matrix
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~
data_manipulation.cpp:18:21:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    18 |     Eigen::VectorXd colSums = data.transpose() * Eigen::VectorXd::Ones(data.rows());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |                     ^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> > >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7:   required from ‘class Eigen::SparseCompressedBase<Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    36 | class SparseCompressedBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseTranspose.h:22:9:   required from ‘class Eigen::internal::SparseTransposeImpl<Eigen::SparseMatrix<double, 0, int>, 1024>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    22 |   class SparseTransposeImpl<MatrixType,CompressedAccessBit>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseTranspose.h:45:37:   required from ‘class Eigen::TransposeImpl<Eigen::SparseMatrix<double, 0, int>, Eigen::Sparse>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    45 | template<typename MatrixType> class TransposeImpl<MatrixType,Sparse>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37:   required from ‘class Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    52 | template<typename MatrixType> class Transpose
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                     ^~~~~~~~~
data_manipulation.cpp:18:45:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    18 |     Eigen::VectorXd colSums = data.transpose() * Eigen::VectorXd::Ones(data.rows());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                               ~~~~~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   47 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, 1> >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, 1> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, 1> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7:   required from ‘class Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:    60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp<NullaryOp, PlainObjectType> >::type, internal::no_assignment_operator
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |       ^~~~~~~~~~~~~~
data_manipulation.cpp:18:71:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:    18 |     Eigen::VectorXd colSums = data.transpose() * Eigen::VectorXd::Ones(data.rows());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |                                                  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Product<Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >, Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, 1> >, 0>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Product<Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >, Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, 1> >, 0> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Product<Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >, Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, 1> >, 0> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7:   required from ‘class Eigen::internal::dense_product_base<Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >, Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, 1> >, 0, 7>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   120 | class dense_product_base
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7:   required from ‘class Eigen::ProductImpl<Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >, Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, 1> >, 0, Eigen::Dense>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   152 | class ProductImpl<Lhs,Rhs,Option,Dense>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7:   required from ‘class Eigen::Product<Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >, Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, 1> >, 0>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    71 | class Product : public ProductImpl<_Lhs,_Rhs,Option,
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~
data_manipulation.cpp:18:83:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    18 |     Eigen::VectorXd colSums = data.transpose() * Eigen::VectorXd::Ones(data.rows());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                                                   ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::SparseMatrix<double, 1, int> >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7:   required from ‘class Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 1, int> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    36 | class SparseCompressedBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7:   required from ‘class Eigen::SparseMatrix<double, 1, int>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    96 | class SparseMatrix
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~
data_manipulation.cpp:75:127:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    75 |                                              std::vector< std::string > mat2_rownames, std::vector< std::string > all_rownames){
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                                                                                               ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   47 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1>, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:   302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1>, 3>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:   555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<double, -1, -1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, -1, -1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, -1, -1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:    98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |       ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<double, -1, -1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:   178 | class Matrix
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |       ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Map.h:24:49:   required from ‘struct Eigen::internal::traits<Eigen::Map<Eigen::Matrix<double, -1, -1> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:    24 |                              ? PlainObjectType::ColsAtCompileTime
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |                                                 ^~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:32:48:   required from ‘struct Eigen::internal::accessors_level<Eigen::Map<Eigen::Matrix<double, -1, -1> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:    32 |   enum { has_direct_access = (traits<Derived>::Flags & DirectAccessBit) ? 1 : 0,
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |                                                ^~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:111:75:   required from ‘class Eigen::Map<Eigen::Matrix<double, -1, -1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:   111 |          int Level = internal::accessors_level<Derived>::has_write_access ? WriteAccessors : ReadOnlyAccessors
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |                                                          ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
data_manipulation.cpp:131:88:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:   131 | NumericMatrix Standardize(Eigen::Map<Eigen::MatrixXd> mat, bool display_progress = true){
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |                                                                                        ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 3>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Map<Eigen::Matrix<double, -1, -1> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<double, -1, -1> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34:   required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34:   required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   223 | template<typename Derived> class MapBase<Derived, WriteAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79:   required from ‘class Eigen::Map<Eigen::Matrix<double, -1, -1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    94 | template<typename PlainObjectType, int MapOptions, typename StrideType> class Map
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                                               ^~~
data_manipulation.cpp:131:88:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   131 | NumericMatrix Standardize(Eigen::Map<Eigen::MatrixXd> mat, bool display_progress = true){
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                                                        ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, -1, 1>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, -1, 1>, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, -1, 1>, 3>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Array<double, -1, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34:   required from ‘class Eigen::ArrayBase<Eigen::Array<double, -1, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    39 | template<typename Derived> class ArrayBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, -1, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7:   required from ‘class Eigen::Array<double, -1, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    45 | class Array
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~
data_manipulation.cpp:136:20:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   136 |     Eigen::ArrayXd r = mat.col(i).array();
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                    ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true>, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true>, 3>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34:   required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true>, 0>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34:   required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true>, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   223 | template<typename Derived> class MapBase<Derived, WriteAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7:   required from ‘class Eigen::internal::BlockImpl_dense<Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true, true>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   329 | class BlockImpl_dense<XprType,BlockRows,BlockCols, InnerPanel,true>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7:   required from ‘class Eigen::BlockImpl<Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true, Eigen::Dense>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   154 | class BlockImpl<XprType, BlockRows, BlockCols, InnerPanel, Dense>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81:   required from ‘class Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   103 | template<typename XprType, int BlockRows, int BlockCols, bool InnerPanel> class Block
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                                                 ^~~~~
data_manipulation.cpp:136:31:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   136 |     Eigen::ArrayXd r = mat.col(i).array();
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                        ~~~~~~~^~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> >, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> >, 3>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34:   required from ‘class Eigen::ArrayBase<Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    39 | template<typename Derived> class ArrayBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7:   required from ‘class Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    42 | class ArrayWrapper : public ArrayBase<ArrayWrapper<ExpressionType> >
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~
data_manipulation.cpp:136:40:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   136 |     Eigen::ArrayXd r = mat.col(i).array();
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                        ~~~~~~~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34:   required from ‘class Eigen::ArrayBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    39 | template<typename Derived> class ArrayBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7:   required from ‘class Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp<NullaryOp, PlainObjectType> >::type, internal::no_assignment_operator
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28:   required from ‘struct Eigen::internal::traits<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    38 |                    >::type Scalar;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                            ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> >, Eigen::Dense>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   148 | class CwiseBinaryOpImpl
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    77 | class CwiseBinaryOp :
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~
data_manipulation.cpp:138:32:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   138 |     double colSdev = sqrt((r - colMean).square().sum() / (mat.rows() - 1));
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                ^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34:   required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    39 | template<typename Derived> class ArrayBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> >, Eigen::Dense>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   148 | class CwiseBinaryOpImpl
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    77 | class CwiseBinaryOp :
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~
data_manipulation.cpp:138:32:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   138 |     double colSdev = sqrt((r - colMean).square().sum() / (mat.rows() - 1));
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                ^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > > >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > > > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34:   required from ‘class Eigen::ArrayBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > > > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    39 | template<typename Derived> class ArrayBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7:   required from ‘class Eigen::CwiseUnaryOpImpl<Eigen::internal::scalar_square_op<double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >, Eigen::Dense>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    94 | class CwiseUnaryOpImpl
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7:   required from ‘class Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    55 | class CwiseUnaryOp : public CwiseUnaryOpImpl<UnaryOp, XprType, typename internal::traits<XprType>::StorageKind>, internal::no_assignment_operator
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~
data_manipulation.cpp:138:47:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   138 |     double colSdev = sqrt((r - colMean).square().sum() / (mat.rows() - 1));
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                           ~~~~~~~~~~~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::Block<Eigen::SparseMatrix<double, 0, int>, -1, 1, true> >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7:   required from ‘class Eigen::SparseCompressedBase<Eigen::Block<Eigen::SparseMatrix<double, 0, int>, -1, 1, true> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    36 | class SparseCompressedBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseBlock.h:96:7:   required from ‘class Eigen::internal::sparse_matrix_block_impl<Eigen::SparseMatrix<double, 0, int>, -1, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    96 | class sparse_matrix_block_impl
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseBlock.h:287:7:   required from ‘class Eigen::BlockImpl<Eigen::SparseMatrix<double, 0, int>, -1, 1, true, Eigen::Sparse>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   287 | class BlockImpl<SparseMatrix<_Scalar, _Options, _StorageIndex>,BlockRows,BlockCols,true,Sparse>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81:   required from ‘class Eigen::Block<Eigen::SparseMatrix<double, 0, int>, -1, 1, true>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   103 | template<typename XprType, int BlockRows, int BlockCols, bool InnerPanel> class Block
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                                                 ^~~~~
data_manipulation.cpp:186:50:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   186 |     Eigen::VectorXd col = Eigen::VectorXd(mat.col(k));
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                           ~~~~~~~^~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   47 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:   302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, 3>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:   555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34:   required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, 0>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:    37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34:   required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:   223 | template<typename Derived> class MapBase<Derived, WriteAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7:   required from ‘class Eigen::internal::BlockImpl_dense<Eigen::Matrix<double, -1, -1>, -1, 1, true, true>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:   329 | class BlockImpl_dense<XprType,BlockRows,BlockCols, InnerPanel,true>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7:   required from ‘class Eigen::BlockImpl<Eigen::Matrix<double, -1, -1>, -1, 1, true, Eigen::Dense>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:   154 | class BlockImpl<XprType, BlockRows, BlockCols, InnerPanel, Dense>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81:   required from ‘class Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:   103 | template<typename XprType, int BlockRows, int BlockCols, bool InnerPanel> class Block
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |                                                                                 ^~~~~
data_manipulation.cpp:187:19:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:   187 |     scaled_mat.col(k) = (col.array() - colMean) / colSdev;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |     ~~~~~~~~~~~~~~^~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<Eigen::Matrix<double, -1, 1> >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<Eigen::Matrix<double, -1, 1> >, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<Eigen::Matrix<double, -1, 1> >, 3>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::ArrayWrapper<Eigen::Matrix<double, -1, 1> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34:   required from ‘class Eigen::ArrayBase<Eigen::ArrayWrapper<Eigen::Matrix<double, -1, 1> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    39 | template<typename Derived> class ArrayBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7:   required from ‘class Eigen::ArrayWrapper<Eigen::Matrix<double, -1, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    42 | class ArrayWrapper : public ArrayBase<ArrayWrapper<ExpressionType> >
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~
data_manipulation.cpp:187:35:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   187 |     scaled_mat.col(k) = (col.array() - colMean) / colSdev;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                          ~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, 1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, 1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34:   required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, 1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    39 | template<typename Derived> class ArrayBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_difference_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, 1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> >, Eigen::Dense>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   148 | class CwiseBinaryOpImpl
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, 1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    77 | class CwiseBinaryOp :
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~
data_manipulation.cpp:187:40:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   187 |     scaled_mat.col(k) = (col.array() - colMean) / colSdev;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                        ^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, 1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, 1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34:   required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, 1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    39 | template<typename Derived> class ArrayBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, 1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> >, Eigen::Dense>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   148 | class CwiseBinaryOpImpl
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, 1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    77 | class CwiseBinaryOp :
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~
data_manipulation.cpp:187:51:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   187 |     scaled_mat.col(k) = (col.array() - colMean) / colSdev;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                   ^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 3>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37:   required from ‘class Eigen::TransposeImpl<Eigen::Matrix<double, -1, -1>, Eigen::Dense>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   118 | template<typename MatrixType> class TransposeImpl<MatrixType,Dense>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37:   required from ‘class Eigen::Transpose<Eigen::Matrix<double, -1, -1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    52 | template<typename MatrixType> class Transpose
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                     ^~~~~~~~~
data_manipulation.cpp:194:30:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   194 |   return scaled_mat.transpose();
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |          ~~~~~~~~~~~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:56:7:   required from ‘class Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    56 | class PartialReduxExpr : public internal::dense_xpr_base< PartialReduxExpr<MatrixType, MemberOp, Direction> >::type,
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28:   required from ‘struct Eigen::internal::traits<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    38 |                    >::type Scalar;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                            ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> >, Eigen::Dense>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   148 | class CwiseBinaryOpImpl
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    77 | class CwiseBinaryOp :
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~
data_manipulation.cpp:229:45:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   229 |     mat = mat.rowwise() - mat.colwise().mean();
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                           ~~~~~~~~~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7:   required from ‘class Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp<NullaryOp, PlainObjectType> >::type, internal::no_assignment_operator
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28:   required from ‘struct Eigen::internal::traits<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    38 |                    >::type Scalar;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                            ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> >, Eigen::Dense>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   148 | class CwiseBinaryOpImpl
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    77 | class CwiseBinaryOp :
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~
data_manipulation.cpp:229:45:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   229 |     mat = mat.rowwise() - mat.colwise().mean();
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                           ~~~~~~~~~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> >, Eigen::Dense>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   148 | class CwiseBinaryOpImpl
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    77 | class CwiseBinaryOp :
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~
data_manipulation.cpp:229:45:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   229 |     mat = mat.rowwise() - mat.colwise().mean();
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                           ~~~~~~~~~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 1, -1>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 1, -1>, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 1, -1>, 3>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<double, 1, -1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, 1, -1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, 1, -1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<double, 1, -1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   178 | class Matrix
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~
data_manipulation.cpp:229:46:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   229 |     mat = mat.rowwise() - mat.colwise().mean();
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                              ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Replicate<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > >, -1, 1>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Replicate<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > >, -1, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Replicate<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > >, -1, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Replicate.h:61:65:   required from ‘class Eigen::Replicate<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > >, -1, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    61 | template<typename MatrixType,int RowFactor,int ColFactor> class Replicate
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                                 ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28:   required from ‘struct Eigen::internal::traits<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Replicate<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > >, -1, 1> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    38 |                    >::type Scalar;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                            ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Replicate<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > >, -1, 1>, Eigen::Dense>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   148 | class CwiseBinaryOpImpl
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Replicate<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > >, -1, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    77 | class CwiseBinaryOp :
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~
data_manipulation.cpp:229:46:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   229 |     mat = mat.rowwise() - mat.colwise().mean();
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                              ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Replicate<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > >, -1, 1> >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Replicate<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > >, -1, 1> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Replicate<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > >, -1, 1> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Replicate<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > >, -1, 1>, Eigen::Dense>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   148 | class CwiseBinaryOpImpl
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Replicate<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > >, -1, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    77 | class CwiseBinaryOp :
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~
data_manipulation.cpp:229:46:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   229 |     mat = mat.rowwise() - mat.colwise().mean();
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                              ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 2>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   481 | class DenseCoeffsBase<Derived, DirectAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37:   required from ‘class Eigen::TransposeImpl<const Eigen::Matrix<double, -1, -1>, Eigen::Dense>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   118 | template<typename MatrixType> class TransposeImpl<MatrixType,Dense>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37:   required from ‘class Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    52 | template<typename MatrixType> class Transpose
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                     ^~~~~~~~~
data_manipulation.cpp:231:37:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                          ~~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7:   required from ‘class Eigen::internal::dense_product_base<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0, 8>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   120 | class dense_product_base
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7:   required from ‘class Eigen::ProductImpl<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0, Eigen::Dense>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   152 | class ProductImpl<Lhs,Rhs,Option,Dense>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7:   required from ‘class Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    71 | class Product : public ProductImpl<_Lhs,_Rhs,Option,
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~
data_manipulation.cpp:231:42:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                          ^~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7:   required from ‘class Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp<NullaryOp, PlainObjectType> >::type, internal::no_assignment_operator
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28:   required from ‘struct Eigen::internal::traits<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    38 |                    >::type Scalar;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                            ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> >, Eigen::Dense>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   148 | class CwiseBinaryOpImpl
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    77 | class CwiseBinaryOp :
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~
data_manipulation.cpp:231:70:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> >, Eigen::Dense>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   148 | class CwiseBinaryOpImpl
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    77 | class CwiseBinaryOp :
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~
data_manipulation.cpp:231:70:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false>, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false>, 3>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34:   required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false>, 0>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34:   required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false>, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   223 | template<typename Derived> class MapBase<Derived, WriteAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7:   required from ‘class Eigen::internal::BlockImpl_dense<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false, true>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   329 | class BlockImpl_dense<XprType,BlockRows,BlockCols, InnerPanel,true>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7:   required from ‘class Eigen::BlockImpl<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false, Eigen::Dense>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   154 | class BlockImpl<XprType, BlockRows, BlockCols, InnerPanel, Dense>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81:   required from ‘class Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   103 | template<typename XprType, int BlockRows, int BlockCols, bool InnerPanel> class Block
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                                                 ^~~~~
data_manipulation.cpp:368:29:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   368 |     Eigen::ArrayXd r = x.row(i).array();
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                        ~~~~~^~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> >, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> >, 3>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34:   required from ‘class Eigen::ArrayBase<Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    39 | template<typename Derived> class ArrayBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7:   required from ‘class Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    42 | class ArrayWrapper : public ArrayBase<ArrayWrapper<ExpressionType> >
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~
data_manipulation.cpp:368:38:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   368 |     Eigen::ArrayXd r = x.row(i).array();
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                        ~~~~~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::SparseMatrix<double, 0, int>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:336:80:   required from ‘struct Eigen::internal::evaluator<Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 0, int> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   336 |   typedef typename DenseCoeffsBase<Derived,ReadOnlyAccessors>::CoeffReturnType CoeffReturnType;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                                                ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1505:8:   required from ‘struct Eigen::internal::evaluator<Eigen::SparseMatrix<double, 0, int> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:  1505 | struct evaluator<SparseMatrix<_Scalar,_Options,_StorageIndex> >
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseTranspose.h:58:63:   required from ‘struct Eigen::internal::unary_evaluator<Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >, Eigen::internal::IteratorBased, double>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    58 |     typedef typename evaluator<ArgType>::InnerIterator        EvalIterator;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                               ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8:   required from ‘struct Eigen::internal::evaluator<Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    90 | struct evaluator : public unary_evaluator<T>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |        ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1181:93:   required from ‘Eigen::SparseMatrix<_Scalar, _Options, _StorageIndex>& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::operator=(const Eigen::SparseMatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >; _Scalar = double; int _Options = 0; _StorageIndex = int]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:  1181 |   const bool needToTranspose = (Flags & RowMajorBit) != (internal::evaluator<OtherDerived>::Flags & RowMajorBit);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                                                             ^~~~~
data_manipulation.cpp:150:23:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   150 |   mat = mat.transpose();
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                       ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, 3>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34:   required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, 0>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34:   required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   223 | template<typename Derived> class MapBase<Derived, WriteAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7:   required from ‘class Eigen::internal::BlockImpl_dense<Eigen::Matrix<double, -1, -1>, -1, -1, false, true>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   329 | class BlockImpl_dense<XprType,BlockRows,BlockCols, InnerPanel,true>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7:   required from ‘class Eigen::BlockImpl<Eigen::Matrix<double, -1, -1>, -1, -1, false, Eigen::Dense>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   154 | class BlockImpl<XprType, BlockRows, BlockCols, InnerPanel, Dense>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81:   required from ‘class Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   103 | template<typename XprType, int BlockRows, int BlockCols, bool InnerPanel> class Block
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                                                 ^~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CommaInitializer.h:99:21:   required from ‘Eigen::CommaInitializer<MatrixType>& Eigen::CommaInitializer<MatrixType>::operator,(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Matrix<double, -1, -1>; XprType = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    98 |     m_xpr.template block<OtherDerived::RowsAtCompileTime, OtherDerived::ColsAtCompileTime>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
      99 |                     (m_row, m_col, other.rows(), other.cols()) = other;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
data_manipulation.cpp:249:17:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   249 |   mat3 << mat1, mat2;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                 ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::SparseMatrix<double, 1, int>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:336:80:   required from ‘struct Eigen::internal::evaluator<Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 1, int> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   336 |   typedef typename DenseCoeffsBase<Derived,ReadOnlyAccessors>::CoeffReturnType CoeffReturnType;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                                                ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1505:8:   required from ‘struct Eigen::internal::evaluator<Eigen::SparseMatrix<double, 1, int> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:  1505 | struct evaluator<SparseMatrix<_Scalar,_Options,_StorageIndex> >
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1181:93:   required from ‘Eigen::SparseMatrix<_Scalar, _Options, _StorageIndex>& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::operator=(const Eigen::SparseMatrixBase<OtherDerived>&) [with OtherDerived = Eigen::SparseMatrix<double, 1, int>; _Scalar = double; int _Options = 0; _StorageIndex = int]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:  1181 |   const bool needToTranspose = (Flags & RowMajorBit) != (internal::evaluator<OtherDerived>::Flags & RowMajorBit);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                                                             ^~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1063:7:   required from ‘void Eigen::internal::set_from_triplets(const InputIterator&, const InputIterator&, SparseMatrixType&, DupFunctor) [with InputIterator = __gnu_cxx::__normal_iterator<Eigen::Triplet<double>*, std::vector<Eigen::Triplet<double> > >; SparseMatrixType = Eigen::SparseMatrix<double, 0, int>; DupFunctor = scalar_sum_op<double, double>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:  1063 |   mat = trMat;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |   ~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1110:92:   required from ‘void Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::setFromTriplets(const InputIterators&, const InputIterators&) [with InputIterators = __gnu_cxx::__normal_iterator<Eigen::Triplet<double>*, std::vector<Eigen::Triplet<double> > >; _Scalar = double; int _Options = 0; _StorageIndex = int]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:  1110 |   internal::set_from_triplets<InputIterators, SparseMatrix<Scalar,_Options,_StorageIndex> >(begin, end, *this, internal::scalar_sum_op<Scalar,Scalar>());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
data_manipulation.cpp:110:31:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   110 |   combined_mat.setFromTriplets(tripletList.begin(), tripletList.end());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::Ref<const Eigen::SparseMatrix<double, 0, int>, 0, Eigen::OuterStride<> > >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7:   required from ‘class Eigen::SparseCompressedBase<Eigen::Ref<const Eigen::SparseMatrix<double, 0, int>, 0, Eigen::OuterStride<> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    36 | class SparseCompressedBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:50:7:   required from ‘class Eigen::SparseMapBase<Eigen::Ref<const Eigen::SparseMatrix<double, 0, int>, 0, Eigen::OuterStride<> >, 0>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    50 | class SparseMapBase<Derived,ReadOnlyAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseRef.h:83:34:   required from ‘class Eigen::internal::SparseRefBase<Eigen::Ref<const Eigen::SparseMatrix<double, 0, int>, 0, Eigen::OuterStride<> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    83 | template<typename Derived> class SparseRefBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseRef.h:177:7:   required from ‘class Eigen::Ref<const Eigen::SparseMatrix<double, 0, int>, 0, Eigen::OuterStride<> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   177 | class Ref<const SparseMatrix<MatScalar,MatOptions,MatIndex>, Options, StrideType>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseBlock.h:128:88:   required from ‘Eigen::internal::sparse_matrix_block_impl<SparseMatrixType, BlockRows, BlockCols>::BlockType& Eigen::internal::sparse_matrix_block_impl<SparseMatrixType, BlockRows, BlockCols>::operator=(const Eigen::SparseMatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Block<Eigen::SparseMatrix<double, 0, int>, -1, 1, true>; SparseMatrixType = Eigen::SparseMatrix<double, 0, int>; int BlockRows = -1; int BlockCols = 1; BlockType = Eigen::Block<Eigen::SparseMatrix<double, 0, int>, -1, 1, true>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   128 |       Ref<const SparseMatrix<Scalar, IsRowMajor ? RowMajor : ColMajor, StorageIndex> > tmp(other.derived());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                                                        ^~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseBlock.h:216:34:   required from ‘Eigen::internal::sparse_matrix_block_impl<SparseMatrixType, BlockRows, BlockCols>::BlockType& Eigen::internal::sparse_matrix_block_impl<SparseMatrixType, BlockRows, BlockCols>::operator=(const BlockType&) [with SparseMatrixType = Eigen::SparseMatrix<double, 0, int>; int BlockRows = -1; int BlockCols = 1; BlockType = Eigen::Block<Eigen::SparseMatrix<double, 0, int>, -1, 1, true>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   216 |       return operator=<BlockType>(other);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |              ~~~~~~~~~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:111:5:   required from ‘Eigen::Block<XprType, BlockRows, BlockCols, InnerPanel>& Eigen::Block<XprType, BlockRows, BlockCols, InnerPanel>::operator=(const Eigen::Block<XprType, BlockRows, BlockCols, InnerPanel>&) [with XprType = Eigen::SparseMatrix<double, 0, int>; int BlockRows = -1; int BlockCols = 1; bool InnerPanel = true]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:  1207 |       Base::operator=(other); \
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ~~~~~~~~~~~~~~~^~~~~~~
data_manipulation.cpp:409:42:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   409 |     mat.col(ci) = replacement.col(rep_idx);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                          ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   47 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::Block<Eigen::Ref<const Eigen::SparseMatrix<double, 0, int>, 0, Eigen::OuterStride<> >, -1, 1, true> >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseBlock.h:17:7:   required from ‘class Eigen::BlockImpl<Eigen::Ref<const Eigen::SparseMatrix<double, 0, int>, 0, Eigen::OuterStride<> >, -1, 1, true, Eigen::Sparse>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:    17 | class BlockImpl<XprType,BlockRows,BlockCols,true,Sparse>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81:   required from ‘class Eigen::Block<Eigen::Ref<const Eigen::SparseMatrix<double, 0, int>, 0, Eigen::OuterStride<> >, -1, 1, true>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:   103 | template<typename XprType, int BlockRows, int BlockCols, bool InnerPanel> class Block
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |                                                                                 ^~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseBlock.h:194:85:   required from ‘Eigen::internal::sparse_matrix_block_impl<SparseMatrixType, BlockRows, BlockCols>::BlockType& Eigen::internal::sparse_matrix_block_impl<SparseMatrixType, BlockRows, BlockCols>::operator=(const Eigen::SparseMatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Block<Eigen::SparseMatrix<double, 0, int>, -1, 1, true>; SparseMatrixType = Eigen::SparseMatrix<double, 0, int>; int BlockRows = -1; int BlockCols = 1; BlockType = Eigen::Block<Eigen::SparseMatrix<double, 0, int>, -1, 1, true>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:   194 |           StorageIndex nnz_k = internal::convert_index<StorageIndex>(tmp.innerVector(k).nonZeros());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |                                                                      ~~~~~~~~~~~~~~~^~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseBlock.h:216:34:   required from ‘Eigen::internal::sparse_matrix_block_impl<SparseMatrixType, BlockRows, BlockCols>::BlockType& Eigen::internal::sparse_matrix_block_impl<SparseMatrixType, BlockRows, BlockCols>::operator=(const BlockType&) [with SparseMatrixType = Eigen::SparseMatrix<double, 0, int>; int BlockRows = -1; int BlockCols = 1; BlockType = Eigen::Block<Eigen::SparseMatrix<double, 0, int>, -1, 1, true>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:   216 |       return operator=<BlockType>(other);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |              ~~~~~~~~~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:111:5:   required from ‘Eigen::Block<XprType, BlockRows, BlockCols, InnerPanel>& Eigen::Block<XprType, BlockRows, BlockCols, InnerPanel>::operator=(const Eigen::Block<XprType, BlockRows, BlockCols, InnerPanel>&) [with XprType = Eigen::SparseMatrix<double, 0, int>; int BlockRows = -1; int BlockCols = 1; bool InnerPanel = true]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:  1207 |       Base::operator=(other); \
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |       ~~~~~~~~~~~~~~~^~~~~~~
data_manipulation.cpp:409:42:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:   409 |     mat.col(ci) = replacement.col(rep_idx);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |                                          ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   47 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase<Derived>&) [with Derived = Eigen::Array<double, -1, 1>; Eigen::Index = long int]’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:243:63:   required from ‘static Eigen::internal::redux_impl<Func, Evaluator, 3, 0>::Scalar Eigen::internal::redux_impl<Func, Evaluator, 3, 0>::run(const Evaluator&, const Func&, const XprType&) [with XprType = Eigen::Array<double, -1, 1>; Func = Eigen::internal::scalar_sum_op<double, double>; Evaluator = Eigen::internal::redux_evaluator<Eigen::Array<double, -1, 1> >; Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:   243 |     const Index alignedStart = internal::first_default_aligned(xpr);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |                                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56:   required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::Array<double, -1, 1>; typename Eigen::internal::traits<T>::Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:   418 |   return internal::redux_impl<Func, ThisEvaluator>::run(thisEval, func, derived());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:478:32:   required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::mean() const [with Derived = Eigen::Array<double, -1, 1>; typename Eigen::internal::traits<T>::Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:   478 |   return Scalar(derived().redux(Eigen::internal::scalar_sum_op<Scalar,Scalar>())) / Scalar(this->size());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |                 ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
data_manipulation.cpp:137:28:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:   137 |     double colMean = r.mean();
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |                      ~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  654 |   return internal::first_aligned<int(unpacket_traits<DefaultPacketType>::alignment),Derived>(m);
      |                                                                          ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase<Derived>&) [with Derived = Eigen::CwiseUnaryOp<scalar_square_op<double>, const Eigen::CwiseBinaryOp<scalar_difference_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > > >; Eigen::Index = long int]’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:243:63:   required from ‘static Eigen::internal::redux_impl<Func, Evaluator, 3, 0>::Scalar Eigen::internal::redux_impl<Func, Evaluator, 3, 0>::run(const Evaluator&, const Func&, const XprType&) [with XprType = Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > > >; Func = Eigen::internal::scalar_sum_op<double, double>; Evaluator = Eigen::internal::redux_evaluator<Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > > > >; Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:   243 |     const Index alignedStart = internal::first_default_aligned(xpr);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:       |                                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56:   required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > > >; typename Eigen::internal::traits<T>::Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:   418 |   return internal::redux_impl<Func, ThisEvaluator>::run(thisEval, func, derived());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:       |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25:   required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > > >; typename Eigen::internal::traits<T>::Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:   463 |   return derived().redux(Eigen::internal::scalar_sum_op<Scalar,Scalar>());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:       |          ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
data_manipulation.cpp:138:53:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:   138 |     double colSdev = sqrt((r - colMean).square().sum() / (mat.rows() - 1));
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:       |                           ~~~~~~~~~~~~~~~~~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  654 |   return internal::first_aligned<int(unpacket_traits<DefaultPacketType>::alignment),Derived>(m);
      |                                                                          ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Array<double, -1, 1> >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Array<double, -1, 1> >, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:   302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Array<double, -1, 1> >, 3>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:   555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Transpose<Eigen::Array<double, -1, 1> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34:   required from ‘class Eigen::ArrayBase<Eigen::Transpose<Eigen::Array<double, -1, 1> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:    39 | template<typename Derived> class ArrayBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37:   required from ‘class Eigen::TransposeImpl<Eigen::Array<double, -1, 1>, Eigen::Dense>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:   118 | template<typename MatrixType> class TransposeImpl<MatrixType,Dense>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:       |                                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37:   required from ‘class Eigen::Transpose<Eigen::Array<double, -1, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:    52 | template<typename MatrixType> class Transpose
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:       |                                     ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:883:17:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Array<double, -1, 1>; Src = Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> >; Func = assign_op<double, double>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:   883 |   ActualDstType actualDst(dst);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:       |                 ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> >; Derived = Eigen::Array<double, -1, 1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:   797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> >; Derived = Eigen::Array<double, -1, 1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:   594 |       _set_noalias(other);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:       |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Array.h:288:29:   required from ‘Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Array(const Eigen::EigenBase<OtherDerived>&, typename Eigen::internal::enable_if<std::is_convertible<typename OtherDerived::Scalar, typename Eigen::internal::traits<Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols> >::Scalar>::value, PrivateType>::type) [with OtherDerived = Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1; typename Eigen::internal::enable_if<std::is_convertible<typename OtherDerived::Scalar, typename Eigen::internal::traits<Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols> >::Scalar>::value, PrivateType>::type = Eigen::Array<double, -1, 1>::PrivateType; typename OtherDerived::Scalar = double; typename Eigen::internal::traits<Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols> >::Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:   288 |       : Base(other.derived())
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:       |                             ^
data_manipulation.cpp:368:39:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:   368 |     Eigen::ArrayXd r = x.row(i).array();
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:       |                                       ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Ref<const Eigen::SparseMatrix<double, 0, int>, 0, Eigen::OuterStride<> >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:336:80:   required from ‘struct Eigen::internal::evaluator<Eigen::SparseCompressedBase<Eigen::Ref<const Eigen::SparseMatrix<double, 0, int>, 0, Eigen::OuterStride<> > > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   336 |   typedef typename DenseCoeffsBase<Derived,ReadOnlyAccessors>::CoeffReturnType CoeffReturnType;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                                                ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseRef.h:364:8:   required from ‘struct Eigen::internal::evaluator<Eigen::Ref<const Eigen::SparseMatrix<double, 0, int>, 0, Eigen::OuterStride<> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   364 | struct evaluator<Ref<const SparseMatrix<MatScalar,MatOptions,MatIndex>, Options, StrideType> >
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseBlock.h:45:21:   required from ‘Eigen::Index Eigen::BlockImpl<XprType, BlockRows, BlockCols, true, Eigen::Sparse>::nonZeros() const [with XprType = Eigen::Ref<const Eigen::SparseMatrix<double, 0, int>, 0, Eigen::OuterStride<> >; int BlockRows = -1; int BlockCols = 1; Eigen::Index = long int]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    45 |       EvaluatorType matEval(m_matrix);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                     ^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseBlock.h:194:97:   required from ‘Eigen::internal::sparse_matrix_block_impl<SparseMatrixType, BlockRows, BlockCols>::BlockType& Eigen::internal::sparse_matrix_block_impl<SparseMatrixType, BlockRows, BlockCols>::operator=(const Eigen::SparseMatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Block<Eigen::SparseMatrix<double, 0, int>, -1, 1, true>; SparseMatrixType = Eigen::SparseMatrix<double, 0, int>; int BlockRows = -1; int BlockCols = 1; BlockType = Eigen::Block<Eigen::SparseMatrix<double, 0, int>, -1, 1, true>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   194 |           StorageIndex nnz_k = internal::convert_index<StorageIndex>(tmp.innerVector(k).nonZeros());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseBlock.h:216:34:   required from ‘Eigen::internal::sparse_matrix_block_impl<SparseMatrixType, BlockRows, BlockCols>::BlockType& Eigen::internal::sparse_matrix_block_impl<SparseMatrixType, BlockRows, BlockCols>::operator=(const BlockType&) [with SparseMatrixType = Eigen::SparseMatrix<double, 0, int>; int BlockRows = -1; int BlockCols = 1; BlockType = Eigen::Block<Eigen::SparseMatrix<double, 0, int>, -1, 1, true>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   216 |       return operator=<BlockType>(other);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |              ~~~~~~~~~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:111:5:   required from ‘Eigen::Block<XprType, BlockRows, BlockCols, InnerPanel>& Eigen::Block<XprType, BlockRows, BlockCols, InnerPanel>::operator=(const Eigen::Block<XprType, BlockRows, BlockCols, InnerPanel>&) [with XprType = Eigen::SparseMatrix<double, 0, int>; int BlockRows = -1; int BlockCols = 1; bool InnerPanel = true]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:  1207 |       Base::operator=(other); \
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ~~~~~~~~~~~~~~~^~~~~~~
data_manipulation.cpp:409:42:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   409 |     mat.col(ci) = replacement.col(rep_idx);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                          ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:277:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1384:41:   required from ‘struct Eigen::internal::evaluator_wrapper_base<Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:  1384 |     CoeffReadCost = evaluator<ArgType>::CoeffReadCost,
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                         ^~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1464:8:   required from ‘struct Eigen::internal::unary_evaluator<Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> >, Eigen::internal::IndexBased, double>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:  1464 | struct unary_evaluator<ArrayWrapper<TArgType> >
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8:   required from ‘struct Eigen::internal::evaluator<Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    90 | struct evaluator : public unary_evaluator<T>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |        ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:774:20:   required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Array<double, -1, 1>; SrcXprType = Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> >; Functor = assign_op<double, double>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   774 |   SrcEvaluatorType srcEvaluator(src);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                    ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Array<double, -1, 1>; SrcXprType = Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   954 |     call_dense_assignment_loop(dst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Array<double, -1, 1>; Src = Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> >; Func = assign_op<double, double>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> >; Derived = Eigen::Array<double, -1, 1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> >; Derived = Eigen::Array<double, -1, 1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   594 |       _set_noalias(other);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Array.h:288:29:   required from ‘Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Array(const Eigen::EigenBase<OtherDerived>&, typename Eigen::internal::enable_if<std::is_convertible<typename OtherDerived::Scalar, typename Eigen::internal::traits<Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols> >::Scalar>::value, PrivateType>::type) [with OtherDerived = Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1; typename Eigen::internal::enable_if<std::is_convertible<typename OtherDerived::Scalar, typename Eigen::internal::traits<Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols> >::Scalar>::value, PrivateType>::type = Eigen::Array<double, -1, 1>::PrivateType; typename OtherDerived::Scalar = double; typename Eigen::internal::traits<Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols> >::Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   288 |       : Base(other.derived())
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                             ^
data_manipulation.cpp:136:41:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   136 |     Eigen::ArrayXd r = mat.col(i).array();
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                         ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
 1071 |     PacketAlignment = unpacket_traits<PacketScalar>::alignment,
      |                                                      ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:780:20:   required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>; SrcXprType = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::CwiseBinaryOp<scalar_difference_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, 1> >, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >; Functor = assign_op<double, double>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   780 |   DstEvaluatorType dstEvaluator(dst);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |                    ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, 1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   954 |     call_dense_assignment_loop(dst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::CwiseBinaryOp<scalar_difference_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, 1> >, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >; Func = assign_op<double, double>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:858:27:   required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing<Src>::value), void*>::type) [with Dst = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::CwiseBinaryOp<scalar_difference_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, 1> >, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >; Func = assign_op<double, double>; typename enable_if<(! evaluator_assume_aliasing<Src>::value), void*>::type = void*; typename evaluator_traits<SrcXprType>::Shape = Eigen::DenseShape]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   858 |   call_assignment_no_alias(dst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |   ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18:   required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::CwiseBinaryOp<scalar_difference_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, 1> >, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   836 |   call_assignment(dst, src, internal::assign_op<typename Dst::Scalar,typename Src::Scalar>());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |   ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Assign.h:66:28:   required from ‘Derived& Eigen::MatrixBase<Derived>::operator=(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, 1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >; Derived = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:    66 |   internal::call_assignment(derived(), other.derived());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |   ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
data_manipulation.cpp:187:51:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   187 |     scaled_mat.col(k) = (col.array() - colMean) / colSdev;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |                                                   ^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
 1071 |     PacketAlignment = unpacket_traits<PacketScalar>::alignment,
      |                                                      ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1384:41:   required from ‘struct Eigen::internal::evaluator_wrapper_base<Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:  1384 |     CoeffReadCost = evaluator<ArgType>::CoeffReadCost,
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |                                         ^~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1464:8:   required from ‘struct Eigen::internal::unary_evaluator<Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> >, Eigen::internal::IndexBased, double>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:  1464 | struct unary_evaluator<ArrayWrapper<TArgType> >
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8:   required from ‘struct Eigen::internal::evaluator<Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:    90 | struct evaluator : public unary_evaluator<T>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |        ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:774:20:   required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Transpose<Eigen::Array<double, -1, 1> >; SrcXprType = Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> >; Functor = assign_op<double, double>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   774 |   SrcEvaluatorType srcEvaluator(src);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |                    ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Transpose<Eigen::Array<double, -1, 1> >; SrcXprType = Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   954 |     call_dense_assignment_loop(dst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Array<double, -1, 1>; Src = Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> >; Func = assign_op<double, double>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> >; Derived = Eigen::Array<double, -1, 1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> >; Derived = Eigen::Array<double, -1, 1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   594 |       _set_noalias(other);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Array.h:288:29:   required from ‘Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Array(const Eigen::EigenBase<OtherDerived>&, typename Eigen::internal::enable_if<std::is_convertible<typename OtherDerived::Scalar, typename Eigen::internal::traits<Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols> >::Scalar>::value, PrivateType>::type) [with OtherDerived = Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1; typename Eigen::internal::enable_if<std::is_convertible<typename OtherDerived::Scalar, typename Eigen::internal::traits<Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols> >::Scalar>::value, PrivateType>::type = Eigen::Array<double, -1, 1>::PrivateType; typename OtherDerived::Scalar = double; typename Eigen::internal::traits<Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols> >::Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   288 |       : Base(other.derived())
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |                             ^
data_manipulation.cpp:368:39:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   368 |     Eigen::ArrayXd r = x.row(i).array();
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |                                       ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
 1071 |     PacketAlignment = unpacket_traits<PacketScalar>::alignment,
      |                                                      ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::SparseMatrix<double, 0, int>, -1, 1, true>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:336:80:   required from ‘struct Eigen::internal::evaluator<Eigen::SparseCompressedBase<Eigen::Block<Eigen::SparseMatrix<double, 0, int>, -1, 1, true> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   336 |   typedef typename DenseCoeffsBase<Derived,ReadOnlyAccessors>::CoeffReturnType CoeffReturnType;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |                                                                                ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseBlock.h:549:8:   required from ‘struct Eigen::internal::unary_evaluator<Eigen::Block<Eigen::SparseMatrix<double, 0, int>, -1, 1, true>, Eigen::internal::IteratorBased, double>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   549 | struct unary_evaluator<Block<SparseMatrix<_Scalar, _Options, _StorageIndex>,BlockRows,BlockCols,true>, IteratorBased>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1087:8:   required from ‘struct Eigen::internal::block_evaluator<Eigen::SparseMatrix<double, 0, int>, -1, 1, true, false>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:  1087 | struct block_evaluator<ArgType, BlockRows, BlockCols, InnerPanel, /*HasDirectAccess*/ false>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1034:8:   required from ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::SparseMatrix<double, 0, int>, -1, 1, true> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:  1034 | struct evaluator<Block<ArgType, BlockRows, BlockCols, InnerPanel> >
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:687:97:   required from ‘Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::SparseMatrix(const Eigen::SparseMatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Block<Eigen::SparseMatrix<double, 0, int>, -1, 1, true>; _Scalar = double; int _Options = 0; _StorageIndex = int]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   687 |       const bool needToTranspose = (Flags & RowMajorBit) != (internal::evaluator<OtherDerived>::Flags & RowMajorBit);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |                                                                                                 ^~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseRef.h:217:9:   required from ‘void Eigen::Ref<const Eigen::SparseMatrix<_Scalar, _Options, _StorageIndex>, _Options, _StrideType>::construct(const Expression&, Eigen::internal::true_type) [with Expression = Eigen::Block<Eigen::SparseMatrix<double, 0, int>, -1, 1, true>; MatScalar = double; int MatOptions = 0; MatIndex = int; int Options = 0; StrideType = Eigen::OuterStride<>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   217 |         ::new (obj) TPlainObjectType(expr);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseRef.h:190:16:   required from ‘Eigen::Ref<const Eigen::SparseMatrix<_Scalar, _Options, _StorageIndex>, _Options, _StrideType>::Ref(const Eigen::SparseMatrixBase<OtherDerived>&) [with Derived = Eigen::Block<Eigen::SparseMatrix<double, 0, int>, -1, 1, true>; MatScalar = double; int MatOptions = 0; MatIndex = int; int Options = 0; StrideType = Eigen::OuterStride<>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   190 |       construct(expr.derived(), typename Traits::template match<Derived>::type());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |       ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseBlock.h:128:88:   required from ‘Eigen::internal::sparse_matrix_block_impl<SparseMatrixType, BlockRows, BlockCols>::BlockType& Eigen::internal::sparse_matrix_block_impl<SparseMatrixType, BlockRows, BlockCols>::operator=(const Eigen::SparseMatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Block<Eigen::SparseMatrix<double, 0, int>, -1, 1, true>; SparseMatrixType = Eigen::SparseMatrix<double, 0, int>; int BlockRows = -1; int BlockCols = 1; BlockType = Eigen::Block<Eigen::SparseMatrix<double, 0, int>, -1, 1, true>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   128 |       Ref<const SparseMatrix<Scalar, IsRowMajor ? RowMajor : ColMajor, StorageIndex> > tmp(other.derived());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |                                                                                        ^~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseBlock.h:216:34:   required from ‘Eigen::internal::sparse_matrix_block_impl<SparseMatrixType, BlockRows, BlockCols>::BlockType& Eigen::internal::sparse_matrix_block_impl<SparseMatrixType, BlockRows, BlockCols>::operator=(const BlockType&) [with SparseMatrixType = Eigen::SparseMatrix<double, 0, int>; int BlockRows = -1; int BlockCols = 1; BlockType = Eigen::Block<Eigen::SparseMatrix<double, 0, int>, -1, 1, true>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   216 |       return operator=<BlockType>(other);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |              ~~~~~~~~~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:111:5:   required from ‘Eigen::Block<XprType, BlockRows, BlockCols, InnerPanel>& Eigen::Block<XprType, BlockRows, BlockCols, InnerPanel>::operator=(const Eigen::Block<XprType, BlockRows, BlockCols, InnerPanel>&) [with XprType = Eigen::SparseMatrix<double, 0, int>; int BlockRows = -1; int BlockCols = 1; bool InnerPanel = true]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:  1207 |       Base::operator=(other); \
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |       ~~~~~~~~~~~~~~~^~~~~~~
data_manipulation.cpp:409:42:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   409 |     mat.col(ci) = replacement.col(rep_idx);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |                                          ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::SparseMatrix<double, 0, int>, -1, 1, true> >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:687:97:   required from ‘Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::SparseMatrix(const Eigen::SparseMatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Block<Eigen::SparseMatrix<double, 0, int>, -1, 1, true>; _Scalar = double; int _Options = 0; _StorageIndex = int]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   687 |       const bool needToTranspose = (Flags & RowMajorBit) != (internal::evaluator<OtherDerived>::Flags & RowMajorBit);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                                                                 ^~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseRef.h:217:9:   required from ‘void Eigen::Ref<const Eigen::SparseMatrix<_Scalar, _Options, _StorageIndex>, _Options, _StrideType>::construct(const Expression&, Eigen::internal::true_type) [with Expression = Eigen::Block<Eigen::SparseMatrix<double, 0, int>, -1, 1, true>; MatScalar = double; int MatOptions = 0; MatIndex = int; int Options = 0; StrideType = Eigen::OuterStride<>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   217 |         ::new (obj) TPlainObjectType(expr);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseRef.h:190:16:   required from ‘Eigen::Ref<const Eigen::SparseMatrix<_Scalar, _Options, _StorageIndex>, _Options, _StrideType>::Ref(const Eigen::SparseMatrixBase<OtherDerived>&) [with Derived = Eigen::Block<Eigen::SparseMatrix<double, 0, int>, -1, 1, true>; MatScalar = double; int MatOptions = 0; MatIndex = int; int Options = 0; StrideType = Eigen::OuterStride<>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   190 |       construct(expr.derived(), typename Traits::template match<Derived>::type());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseBlock.h:128:88:   required from ‘Eigen::internal::sparse_matrix_block_impl<SparseMatrixType, BlockRows, BlockCols>::BlockType& Eigen::internal::sparse_matrix_block_impl<SparseMatrixType, BlockRows, BlockCols>::operator=(const Eigen::SparseMatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Block<Eigen::SparseMatrix<double, 0, int>, -1, 1, true>; SparseMatrixType = Eigen::SparseMatrix<double, 0, int>; int BlockRows = -1; int BlockCols = 1; BlockType = Eigen::Block<Eigen::SparseMatrix<double, 0, int>, -1, 1, true>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   128 |       Ref<const SparseMatrix<Scalar, IsRowMajor ? RowMajor : ColMajor, StorageIndex> > tmp(other.derived());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                                                        ^~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseBlock.h:216:34:   required from ‘Eigen::internal::sparse_matrix_block_impl<SparseMatrixType, BlockRows, BlockCols>::BlockType& Eigen::internal::sparse_matrix_block_impl<SparseMatrixType, BlockRows, BlockCols>::operator=(const BlockType&) [with SparseMatrixType = Eigen::SparseMatrix<double, 0, int>; int BlockRows = -1; int BlockCols = 1; BlockType = Eigen::Block<Eigen::SparseMatrix<double, 0, int>, -1, 1, true>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   216 |       return operator=<BlockType>(other);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |              ~~~~~~~~~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:111:5:   required from ‘Eigen::Block<XprType, BlockRows, BlockCols, InnerPanel>& Eigen::Block<XprType, BlockRows, BlockCols, InnerPanel>::operator=(const Eigen::Block<XprType, BlockRows, BlockCols, InnerPanel>&) [with XprType = Eigen::SparseMatrix<double, 0, int>; int BlockRows = -1; int BlockCols = 1; bool InnerPanel = true]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:  1207 |       Base::operator=(other); \
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ~~~~~~~~~~~~~~~^~~~~~~
data_manipulation.cpp:409:42:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   409 |     mat.col(ci) = replacement.col(rep_idx);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                          ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
 1071 |     PacketAlignment = unpacket_traits<PacketScalar>::alignment,
      |                                                      ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false> >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:780:20:   required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>; SrcXprType = Eigen::Matrix<double, -1, -1>; Functor = assign_op<double, double>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   780 |   DstEvaluatorType dstEvaluator(dst);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |                    ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>; SrcXprType = Eigen::Matrix<double, -1, -1>; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   954 |     call_dense_assignment_loop(dst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>; Src = Eigen::Matrix<double, -1, -1>; Func = assign_op<double, double>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:858:27:   required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing<Src>::value), void*>::type) [with Dst = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>; Src = Eigen::Matrix<double, -1, -1>; Func = assign_op<double, double>; typename enable_if<(! evaluator_assume_aliasing<Src>::value), void*>::type = void*; typename evaluator_traits<SrcXprType>::Shape = Eigen::DenseShape]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   858 |   call_assignment_no_alias(dst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |   ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18:   required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>; Src = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   836 |   call_assignment(dst, src, internal::assign_op<typename Dst::Scalar,typename Src::Scalar>());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |   ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Assign.h:66:28:   required from ‘Derived& Eigen::MatrixBase<Derived>::operator=(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Matrix<double, -1, -1>; Derived = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:    66 |   internal::call_assignment(derived(), other.derived());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |   ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CommaInitializer.h:99:64:   required from ‘Eigen::CommaInitializer<MatrixType>& Eigen::CommaInitializer<MatrixType>::operator,(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Matrix<double, -1, -1>; XprType = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:    98 |     m_xpr.template block<OtherDerived::RowsAtCompileTime, OtherDerived::ColsAtCompileTime>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
      99 |                     (m_row, m_col, other.rows(), other.cols()) = other;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~
data_manipulation.cpp:249:17:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   249 |   mat3 << mat1, mat2;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |                 ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
 1071 |     PacketAlignment = unpacket_traits<PacketScalar>::alignment,
      |                                                      ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, 0>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, 0> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, 0> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7:   required from ‘class Eigen::internal::dense_product_base<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, 0, 7>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   120 | class dense_product_base
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |       ^~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7:   required from ‘class Eigen::ProductImpl<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, 0, Eigen::Dense>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   152 | class ProductImpl<Lhs,Rhs,Option,Dense>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7:   required from ‘class Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, 0>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:    71 | class Product : public ProductImpl<_Lhs,_Rhs,Option,
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |       ^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:345:45:   [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   954 |     call_dense_assignment_loop(dst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   594 |       _set_noalias(other);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   423 |       : Base(other.derived())
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |                             ^
data_manipulation.cpp:231:70:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, 2>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   481 | class DenseCoeffsBase<Derived, DirectAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34:   required from ‘class Eigen::MapBase<Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, 0>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7:   required from ‘class Eigen::internal::BlockImpl_dense<const Eigen::Matrix<double, -1, -1>, -1, 1, true, true>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   329 | class BlockImpl_dense<XprType,BlockRows,BlockCols, InnerPanel,true>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7:   [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   954 |     call_dense_assignment_loop(dst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   594 |       _set_noalias(other);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   423 |       : Base(other.derived())
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                             ^
data_manipulation.cpp:231:70:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8:   required from ‘struct Eigen::internal::evaluator<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   100 | struct evaluator<const T>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |        ^~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:372:102:   required from ‘struct Eigen::internal::plain_object_eval<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, Eigen::Dense>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   372 |   typedef typename plain_matrix_type_dense<T,typename traits<T>::XprKind, evaluator<T>::Flags>::type type;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                                                                      ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:370:45:   required from ‘struct Eigen::internal::generic_product_impl<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, Eigen::DenseShape, Eigen::DenseShape, 7>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   370 |   typedef typename nested_eval<Rhs,1>::type RhsNested;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                             ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:479:24:   required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, -1>; Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   478 |       return internal::generic_product_impl<Lhs,typename Rhs::ConstColXpr,DenseShape,DenseShape,GemvProduct>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
     479 |         ::scaleAndAddTo(dst_vec, a_lhs, a_rhs.col(0), alpha);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |         ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:445:20:   required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   445 |       scaleAndAddTo(dst, lhs, rhs, Scalar(1));
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:124:75:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   954 |     call_dense_assignment_loop(dst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   594 |       _set_noalias(other);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   423 |       : Base(other.derived())
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                             ^
data_manipulation.cpp:231:70:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
 1071 |     PacketAlignment = unpacket_traits<PacketScalar>::alignment,
      |                                                      ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 3>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34:   required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 0>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:    37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34:   [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   954 |     call_dense_assignment_loop(dst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   594 |       _set_noalias(other);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   423 |       : Base(other.derived())
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |                             ^
data_manipulation.cpp:231:70:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Product<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, Eigen::Matrix<double, -1, -1>, 0>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Product<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, Eigen::Matrix<double, -1, -1>, 0> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Product<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, Eigen::Matrix<double, -1, -1>, 0> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7:   required from ‘class Eigen::internal::dense_product_base<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, Eigen::Matrix<double, -1, -1>, 0, 7>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   120 | class dense_product_base
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7:   required from ‘class Eigen::ProductImpl<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, Eigen::Matrix<double, -1, -1>, 0, Eigen::Dense>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   152 | class ProductImpl<Lhs,Rhs,Option,Dense>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7:   required from ‘class Eigen::Product<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, Eigen::Matrix<double, -1, -1>, 0>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    71 | class Product : public ProductImpl<_Lhs,_Rhs,Option,
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:345:45:   [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   954 |     call_dense_assignment_loop(dst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   594 |       _set_noalias(other);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   423 |       : Base(other.derived())
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                             ^
data_manipulation.cpp:231:70:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 2>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   481 | class DenseCoeffsBase<Derived, DirectAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34:   required from ‘class Eigen::MapBase<Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 0>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7:   required from ‘class Eigen::internal::BlockImpl_dense<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true, true>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   329 | class BlockImpl_dense<XprType,BlockRows,BlockCols, InnerPanel,true>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7:   [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   954 |     call_dense_assignment_loop(dst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   594 |       _set_noalias(other);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   423 |       : Base(other.derived())
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                             ^
data_manipulation.cpp:231:70:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8:   required from ‘struct Eigen::internal::evaluator<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   100 | struct evaluator<const T>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |        ^~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:372:102:   required from ‘struct Eigen::internal::plain_object_eval<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, Eigen::Dense>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   372 |   typedef typename plain_matrix_type_dense<T,typename traits<T>::XprKind, evaluator<T>::Flags>::type type;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                                                                      ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:369:45:   required from ‘struct Eigen::internal::generic_product_impl<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, Eigen::Matrix<double, -1, -1>, Eigen::DenseShape, Eigen::DenseShape, 7>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   369 |   typedef typename nested_eval<Lhs,1>::type LhsNested;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                             ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:486:24:   required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, -1>; Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   485 |       return internal::generic_product_impl<typename Lhs::ConstRowXpr,Rhs,DenseShape,DenseShape,GemvProduct>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
     486 |         ::scaleAndAddTo(dst_vec, a_lhs.row(0), a_rhs, alpha);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |         ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:445:20:   required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   445 |       scaleAndAddTo(dst, lhs, rhs, Scalar(1));
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:124:75:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   954 |     call_dense_assignment_loop(dst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   594 |       _set_noalias(other);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   423 |       : Base(other.derived())
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                             ^
data_manipulation.cpp:231:70:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
 1071 |     PacketAlignment = unpacket_traits<PacketScalar>::alignment,
      |                                                      ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 1>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7:   required from ‘class Eigen::internal::dense_product_base<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 1, 8>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   120 | class dense_product_base
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |       ^~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7:   required from ‘class Eigen::ProductImpl<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 1, Eigen::Dense>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   152 | class ProductImpl<Lhs,Rhs,Option,Dense>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7:   required from ‘class Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:    71 | class Product : public ProductImpl<_Lhs,_Rhs,Option,
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |       ^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:462:68:   [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   954 |     call_dense_assignment_loop(dst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   594 |       _set_noalias(other);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   423 |       : Base(other.derived())
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |                             ^
data_manipulation.cpp:231:70:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, -1> >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, -1> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, -1> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7:   required from ‘class Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, -1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp<NullaryOp, PlainObjectType> >::type, internal::no_assignment_operator
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:347:30:   required from ‘Derived& Eigen::DenseBase<Derived>::setConstant(const Scalar&) [with Derived = Eigen::Matrix<double, -1, -1>; Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   347 |   return derived() = Constant(rows(), cols(), val);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                      ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:548:10:   required from ‘Derived& Eigen::DenseBase<Derived>::setZero() [with Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   548 |   return setConstant(Scalar(0));
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |          ^~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:444:18:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   954 |     call_dense_assignment_loop(dst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   594 |       _set_noalias(other);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   423 |       : Base(other.derived())
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                             ^
data_manipulation.cpp:231:70:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true>, 2>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   481 | class DenseCoeffsBase<Derived, DirectAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Block<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Block<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34:   required from ‘class Eigen::MapBase<Eigen::Block<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true>, 0>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7:   required from ‘class Eigen::internal::BlockImpl_dense<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true, true>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   329 | class BlockImpl_dense<XprType,BlockRows,BlockCols, InnerPanel,true>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7:   [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   954 |     call_dense_assignment_loop(dst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   594 |       _set_noalias(other);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   423 |       : Base(other.derived())
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                             ^
data_manipulation.cpp:231:70:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true>, 2>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   481 | class DenseCoeffsBase<Derived, DirectAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Block<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Block<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34:   required from ‘class Eigen::MapBase<Eigen::Block<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true>, 0>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7:   required from ‘class Eigen::internal::BlockImpl_dense<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true, true>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   329 | class BlockImpl_dense<XprType,BlockRows,BlockCols, InnerPanel,true>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7:   [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   954 |     call_dense_assignment_loop(dst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   594 |       _set_noalias(other);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   423 |       : Base(other.derived())
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                             ^
data_manipulation.cpp:231:70:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >, 3>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34:   required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >, 0>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34:   [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   954 |     call_dense_assignment_loop(dst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   594 |       _set_noalias(other);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   423 |       : Base(other.derived())
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                             ^
data_manipulation.cpp:231:70:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:333:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h: In instantiation of ‘class Eigen::internal::gemv_traits<double, double, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:306:38:   required from ‘struct Eigen::internal::general_matrix_vector_product<long int, double, Eigen::internal::const_blas_data_mapper<double, long int, 1>, 1, false, double, Eigen::internal::const_blas_data_mapper<double, long int, 0>, false, 0>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   306 |   typedef typename Traits::LhsPacket LhsPacket;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                      ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:347:132:   required from ‘static void Eigen::internal::gemv_dense_selector<2, 1, true>::run(const Lhs&, const Rhs&, Dest&, const typename Dest::Scalar&) [with Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>; Dest = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>; typename Dest::Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   346 |     general_matrix_vector_product
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~                                                                                                   
     347 |         <Index,LhsScalar,LhsMapper,RowMajor,LhsBlasTraits::NeedToConjugate,RhsScalar,RhsMapper,RhsBlasTraits::NeedToConjugate>::run(
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
     348 |         actualLhs.rows(), actualLhs.cols(),
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~                                                                                         
     349 |         LhsMapper(actualLhs.data(), actualLhs.outerStride()),
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~                                                                       
     350 |         RhsMapper(actualRhsPtr, 1),
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~                                                                                                 
     351 |         dest.data(), dest.col(0).innerStride(), //NOTE  if dest is not a vector at compile-time, then dest.innerStride() might be wrong. (bug 1166)
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
     352 |         actualAlpha);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |         ~~~~~~~~~~~~                                                                                                                
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:388:34:   required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 7>::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>; Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>; Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   385 |     internal::gemv_dense_selector<Side,
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
     386 |                             (int(MatrixType::Flags)&RowMajorBit) ? RowMajor : ColMajor,
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
     387 |                             bool(internal::blas_traits<MatrixType>::HasUsableDirectAccess)
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
     388 |                            >::run(actual_lhs, actual_rhs, dst, alpha);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                            ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:479:24:   required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, -1>; Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   478 |       return internal::generic_product_impl<Lhs,typename Rhs::ConstColXpr,DenseShape,DenseShape,GemvProduct>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
     479 |         ::scaleAndAddTo(dst_vec, a_lhs, a_rhs.col(0), alpha);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |         ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:445:20:   required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   445 |       scaleAndAddTo(dst, lhs, rhs, Scalar(1));
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:124:75:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   954 |     call_dense_assignment_loop(dst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   594 |       _set_noalias(other);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   423 |       : Base(other.derived())
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                             ^
data_manipulation.cpp:231:70:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   44 |   PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   44 |   PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   44 |   PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   44 |   PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   45 |   PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   45 |   PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   45 |   PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   45 |   PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   46 |   PACKET_DECL_COND_PREFIX(_, Res, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   46 |   PACKET_DECL_COND_PREFIX(_, Res, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   46 |   PACKET_DECL_COND_PREFIX(_, Res, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   46 |   PACKET_DECL_COND_PREFIX(_, Res, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   51 |         Vectorizable = unpacket_traits<_LhsPacket>::vectorizable &&
      |                                                     ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   52 |         unpacket_traits<_RhsPacket>::vectorizable &&
      |                                      ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   53 |         int(unpacket_traits<_LhsPacket>::size)==int(unpacket_traits<_RhsPacket>::size),
      |                                          ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   53 |         int(unpacket_traits<_LhsPacket>::size)==int(unpacket_traits<_RhsPacket>::size),
      |                                                                                  ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   54 |         LhsPacketSize = Vectorizable ? unpacket_traits<_LhsPacket>::size : 1,
      |                                                                     ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   55 |         RhsPacketSize = Vectorizable ? unpacket_traits<_RhsPacket>::size : 1,
      |                                                                     ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |         ResPacketSize = Vectorizable ? unpacket_traits<_ResPacket>::size : 1
      |                                                                     ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   59 |   typedef typename conditional<Vectorizable,_LhsPacket,LhsScalar>::type LhsPacket;
      |                                                                         ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   60 |   typedef typename conditional<Vectorizable,_RhsPacket,RhsScalar>::type RhsPacket;
      |                                                                         ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   61 |   typedef typename conditional<Vectorizable,_ResPacket,ResScalar>::type ResPacket;
      |                                                                         ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h: In instantiation of ‘class Eigen::internal::gemv_traits<double, double, 1>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:310:42:   required from ‘struct Eigen::internal::general_matrix_vector_product<long int, double, Eigen::internal::const_blas_data_mapper<double, long int, 1>, 1, false, double, Eigen::internal::const_blas_data_mapper<double, long int, 0>, false, 0>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:   310 |   typedef typename HalfTraits::LhsPacket LhsPacketHalf;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:       |                                          ^~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:347:132:   required from ‘static void Eigen::internal::gemv_dense_selector<2, 1, true>::run(const Lhs&, const Rhs&, Dest&, const typename Dest::Scalar&) [with Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>; Dest = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>; typename Dest::Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:   346 |     general_matrix_vector_product
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~                                                                                                   
     347 |         <Index,LhsScalar,LhsMapper,RowMajor,LhsBlasTraits::NeedToConjugate,RhsScalar,RhsMapper,RhsBlasTraits::NeedToConjugate>::run(
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
     348 |         actualLhs.rows(), actualLhs.cols(),
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~                                                                                         
     349 |         LhsMapper(actualLhs.data(), actualLhs.outerStride()),
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~                                                                       
     350 |         RhsMapper(actualRhsPtr, 1),
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~                                                                                                 
     351 |         dest.data(), dest.col(0).innerStride(), //NOTE  if dest is not a vector at compile-time, then dest.innerStride() might be wrong. (bug 1166)
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
     352 |         actualAlpha);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:       |         ~~~~~~~~~~~~                                                                                                                
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:388:34:   required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 7>::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>; Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>; Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:   385 |     internal::gemv_dense_selector<Side,
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
     386 |                             (int(MatrixType::Flags)&RowMajorBit) ? RowMajor : ColMajor,
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:       |                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
     387 |                             bool(internal::blas_traits<MatrixType>::HasUsableDirectAccess)
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:       |                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
     388 |                            >::run(actual_lhs, actual_rhs, dst, alpha);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:       |                            ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:479:24:   required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, -1>; Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:   478 |       return internal::generic_product_impl<Lhs,typename Rhs::ConstColXpr,DenseShape,DenseShape,GemvProduct>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:       |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
     479 |         ::scaleAndAddTo(dst_vec, a_lhs, a_rhs.col(0), alpha);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:       |         ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:445:20:   required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:   445 |       scaleAndAddTo(dst, lhs, rhs, Scalar(1));
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:       |       ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:124:75:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:   954 |     call_dense_assignment_loop(dst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:   890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:       |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:   797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:   594 |       _set_noalias(other);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:       |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:   423 |       : Base(other.derived())
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:       |                             ^
data_manipulation.cpp:231:70:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:   231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:       |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   44 |   PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   44 |   PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   44 |   PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   44 |   PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   45 |   PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   45 |   PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   45 |   PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   45 |   PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   46 |   PACKET_DECL_COND_PREFIX(_, Res, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   46 |   PACKET_DECL_COND_PREFIX(_, Res, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   46 |   PACKET_DECL_COND_PREFIX(_, Res, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   46 |   PACKET_DECL_COND_PREFIX(_, Res, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   51 |         Vectorizable = unpacket_traits<_LhsPacket>::vectorizable &&
      |                                                     ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   52 |         unpacket_traits<_RhsPacket>::vectorizable &&
      |                                      ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   53 |         int(unpacket_traits<_LhsPacket>::size)==int(unpacket_traits<_RhsPacket>::size),
      |                                          ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   53 |         int(unpacket_traits<_LhsPacket>::size)==int(unpacket_traits<_RhsPacket>::size),
      |                                                                                  ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   54 |         LhsPacketSize = Vectorizable ? unpacket_traits<_LhsPacket>::size : 1,
      |                                                                     ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   55 |         RhsPacketSize = Vectorizable ? unpacket_traits<_RhsPacket>::size : 1,
      |                                                                     ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |         ResPacketSize = Vectorizable ? unpacket_traits<_ResPacket>::size : 1
      |                                                                     ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   59 |   typedef typename conditional<Vectorizable,_LhsPacket,LhsScalar>::type LhsPacket;
      |                                                                         ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   60 |   typedef typename conditional<Vectorizable,_RhsPacket,RhsScalar>::type RhsPacket;
      |                                                                         ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   61 |   typedef typename conditional<Vectorizable,_ResPacket,ResScalar>::type ResPacket;
      |                                                                         ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h: In instantiation of ‘class Eigen::internal::gemv_traits<double, double, 2>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:314:45:   required from ‘struct Eigen::internal::general_matrix_vector_product<long int, double, Eigen::internal::const_blas_data_mapper<double, long int, 1>, 1, false, double, Eigen::internal::const_blas_data_mapper<double, long int, 0>, false, 0>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:   314 |   typedef typename QuarterTraits::LhsPacket LhsPacketQuarter;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:       |                                             ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:347:132:   required from ‘static void Eigen::internal::gemv_dense_selector<2, 1, true>::run(const Lhs&, const Rhs&, Dest&, const typename Dest::Scalar&) [with Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>; Dest = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>; typename Dest::Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:   346 |     general_matrix_vector_product
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~                                                                                                   
     347 |         <Index,LhsScalar,LhsMapper,RowMajor,LhsBlasTraits::NeedToConjugate,RhsScalar,RhsMapper,RhsBlasTraits::NeedToConjugate>::run(
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
     348 |         actualLhs.rows(), actualLhs.cols(),
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~                                                                                         
     349 |         LhsMapper(actualLhs.data(), actualLhs.outerStride()),
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~                                                                       
     350 |         RhsMapper(actualRhsPtr, 1),
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~                                                                                                 
     351 |         dest.data(), dest.col(0).innerStride(), //NOTE  if dest is not a vector at compile-time, then dest.innerStride() might be wrong. (bug 1166)
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
     352 |         actualAlpha);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:       |         ~~~~~~~~~~~~                                                                                                                
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:388:34:   required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 7>::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>; Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>; Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:   385 |     internal::gemv_dense_selector<Side,
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
     386 |                             (int(MatrixType::Flags)&RowMajorBit) ? RowMajor : ColMajor,
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:       |                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
     387 |                             bool(internal::blas_traits<MatrixType>::HasUsableDirectAccess)
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:       |                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
     388 |                            >::run(actual_lhs, actual_rhs, dst, alpha);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:       |                            ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:479:24:   required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, -1>; Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:   478 |       return internal::generic_product_impl<Lhs,typename Rhs::ConstColXpr,DenseShape,DenseShape,GemvProduct>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:       |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
     479 |         ::scaleAndAddTo(dst_vec, a_lhs, a_rhs.col(0), alpha);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:       |         ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:445:20:   required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:   445 |       scaleAndAddTo(dst, lhs, rhs, Scalar(1));
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:       |       ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:124:75:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:   954 |     call_dense_assignment_loop(dst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:   890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:       |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:   797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:   594 |       _set_noalias(other);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:       |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:   423 |       : Base(other.derived())
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:       |                             ^
data_manipulation.cpp:231:70:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:   231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:       |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   44 |   PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   44 |   PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   44 |   PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   44 |   PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   45 |   PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   45 |   PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   45 |   PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   45 |   PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   46 |   PACKET_DECL_COND_PREFIX(_, Res, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   46 |   PACKET_DECL_COND_PREFIX(_, Res, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   46 |   PACKET_DECL_COND_PREFIX(_, Res, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   46 |   PACKET_DECL_COND_PREFIX(_, Res, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   51 |         Vectorizable = unpacket_traits<_LhsPacket>::vectorizable &&
      |                                                     ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   52 |         unpacket_traits<_RhsPacket>::vectorizable &&
      |                                      ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   53 |         int(unpacket_traits<_LhsPacket>::size)==int(unpacket_traits<_RhsPacket>::size),
      |                                          ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   53 |         int(unpacket_traits<_LhsPacket>::size)==int(unpacket_traits<_RhsPacket>::size),
      |                                                                                  ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   54 |         LhsPacketSize = Vectorizable ? unpacket_traits<_LhsPacket>::size : 1,
      |                                                                     ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   55 |         RhsPacketSize = Vectorizable ? unpacket_traits<_RhsPacket>::size : 1,
      |                                                                     ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |         ResPacketSize = Vectorizable ? unpacket_traits<_ResPacket>::size : 1
      |                                                                     ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   59 |   typedef typename conditional<Vectorizable,_LhsPacket,LhsScalar>::type LhsPacket;
      |                                                                         ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   60 |   typedef typename conditional<Vectorizable,_RhsPacket,RhsScalar>::type RhsPacket;
      |                                                                         ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   61 |   typedef typename conditional<Vectorizable,_ResPacket,ResScalar>::type ResPacket;
      |                                                                         ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true>, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:   302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true>, 3>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:   555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34:   required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true>, 0>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:    37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:       |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34:   [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:   954 |     call_dense_assignment_loop(dst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:   890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:       |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:   797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:   594 |       _set_noalias(other);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:       |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:   423 |       : Base(other.derived())
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:       |                             ^
data_manipulation.cpp:231:70:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:   231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning:       |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >, 3>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Transpose<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Transpose<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37:   required from ‘class Eigen::TransposeImpl<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, Eigen::Dense>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   118 | template<typename MatrixType> class TransposeImpl<MatrixType,Dense>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37:   [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   954 |     call_dense_assignment_loop(dst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   594 |       _set_noalias(other);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   423 |       : Base(other.derived())
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                             ^
data_manipulation.cpp:231:70:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, 2>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   481 | class DenseCoeffsBase<Derived, DirectAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37:   required from ‘class Eigen::TransposeImpl<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, Eigen::Dense>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   118 | template<typename MatrixType> class TransposeImpl<MatrixType,Dense>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37:   required from ‘class Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    52 | template<typename MatrixType> class Transpose
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                     ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:207:43:   [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   954 |     call_dense_assignment_loop(dst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   594 |       _set_noalias(other);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   423 |       : Base(other.derived())
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                             ^
data_manipulation.cpp:231:70:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, const Eigen::Block<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true> >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, const Eigen::Block<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, const Eigen::Block<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, const Eigen::Block<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true>, Eigen::Dense>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   148 | class CwiseBinaryOpImpl
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, const Eigen::Block<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    77 | class CwiseBinaryOp :
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:50:56:   required from ‘static Eigen::internal::dot_nocheck<T, U, true>::ResScalar Eigen::internal::dot_nocheck<T, U, true>::run(const Eigen::MatrixBase<Derived>&, const Eigen::MatrixBase<U>&) [with T = Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>; U = Eigen::Block<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true>; ResScalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    50 |     return a.transpose().template binaryExpr<conj_prod>(b).sum();
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:84:58:   [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   954 |     call_dense_assignment_loop(dst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   594 |       _set_noalias(other);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   423 |       : Base(other.derived())
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                             ^
data_manipulation.cpp:231:70:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true> >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true> >, 2>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   481 | class DenseCoeffsBase<Derived, DirectAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37:   required from ‘class Eigen::TransposeImpl<const Eigen::Block<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true>, Eigen::Dense>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   118 | template<typename MatrixType> class TransposeImpl<MatrixType,Dense>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37:   required from ‘class Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    52 | template<typename MatrixType> class Transpose
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                     ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:50:23:   [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   954 |     call_dense_assignment_loop(dst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   594 |       _set_noalias(other);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   423 |       : Base(other.derived())
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                             ^
data_manipulation.cpp:231:70:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, Eigen::Dense>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   148 | class CwiseBinaryOpImpl
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    77 | class CwiseBinaryOp :
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:50:56:   required from ‘static Eigen::internal::dot_nocheck<T, U, true>::ResScalar Eigen::internal::dot_nocheck<T, U, true>::run(const Eigen::MatrixBase<Derived>&, const Eigen::MatrixBase<U>&) [with T = Eigen::Block<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true>; U = Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>; ResScalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    50 |     return a.transpose().template binaryExpr<conj_prod>(b).sum();
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:84:58:   [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   954 |     call_dense_assignment_loop(dst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   594 |       _set_noalias(other);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   423 |       : Base(other.derived())
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                             ^
data_manipulation.cpp:231:70:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Transpose<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >, -1, 1, true>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Transpose<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >, -1, 1, true>, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Transpose<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >, -1, 1, true>, 3>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Transpose<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >, -1, 1, true> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Transpose<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >, -1, 1, true> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34:   required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Transpose<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >, -1, 1, true>, 0>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34:   [ skipping 16 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   954 |     call_dense_assignment_loop(dst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   594 |       _set_noalias(other);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   423 |       : Base(other.derived())
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                             ^
data_manipulation.cpp:231:70:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:330:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of ‘class Eigen::internal::gebp_traits<double, double, false, false, 1, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:147:40:   required from ‘void Eigen::internal::evaluateProductBlockingSizesHeuristic(Index&, Index&, Index&, Index) [with LhsScalar = double; RhsScalar = double; int KcFactor = 1; Index = long int]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   147 |     typedef typename Traits::ResScalar ResScalar;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                        ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:342:81:   required from ‘void Eigen::internal::computeProductBlockingSizes(Index&, Index&, Index&, Index) [with LhsScalar = double; RhsScalar = double; int KcFactor = 1; Index = long int]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   342 |     evaluateProductBlockingSizesHeuristic<LhsScalar, RhsScalar, KcFactor, Index>(k, m, n, num_threads);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:355:66:   required from ‘Eigen::internal::gemm_blocking_space<StorageOrder, _LhsScalar, _RhsScalar, MaxRows, MaxCols, MaxDepth, KcFactor, false>::gemm_blocking_space(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, bool) [with int StorageOrder = 0; _LhsScalar = double; _RhsScalar = double; int MaxRows = -1; int MaxCols = -1; int MaxDepth = -1; int KcFactor = 1; Eigen::Index = long int]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   355 |         computeProductBlockingSizes<LhsScalar,RhsScalar,KcFactor>(this->m_kc, this->m_mc, this->m_nc, num_threads);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:507:18:   required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, -1>; Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   507 |     BlockingType blocking(dst.rows(), dst.cols(), lhs.cols(), 1, true);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                  ^~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:445:20:   required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   445 |       scaleAndAddTo(dst, lhs, rhs, Scalar(1));
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:124:75:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   954 |     call_dense_assignment_loop(dst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   594 |       _set_noalias(other);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   423 |       : Base(other.derived())
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                             ^
data_manipulation.cpp:231:70:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:425:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  425 |   PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:425:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  425 |   PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:425:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  425 |   PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:425:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  425 |   PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:426:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  426 |   PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:426:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  426 |   PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:426:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  426 |   PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:426:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  426 |   PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:427:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  427 |   PACKET_DECL_COND_PREFIX(_, Res, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:427:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  427 |   PACKET_DECL_COND_PREFIX(_, Res, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:427:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  427 |   PACKET_DECL_COND_PREFIX(_, Res, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:427:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  427 |   PACKET_DECL_COND_PREFIX(_, Res, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:49: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  432 |     Vectorizable = unpacket_traits<_LhsPacket>::vectorizable && unpacket_traits<_RhsPacket>::vectorizable,
      |                                                 ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:49: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:49: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:49: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:94: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  432 |     Vectorizable = unpacket_traits<_LhsPacket>::vectorizable && unpacket_traits<_RhsPacket>::vectorizable,
      |                                                                                              ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:94: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:94: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:94: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:433:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  433 |     LhsPacketSize = Vectorizable ? unpacket_traits<_LhsPacket>::size : 1,
      |                                                                 ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:433:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:433:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:433:65: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:434:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  434 |     RhsPacketSize = Vectorizable ? unpacket_traits<_RhsPacket>::size : 1,
      |                                                                 ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:434:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:434:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:434:65: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:435:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  435 |     ResPacketSize = Vectorizable ? unpacket_traits<_ResPacket>::size : 1,
      |                                                                 ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:435:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:435:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:435:65: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:460:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  460 |   typedef typename conditional<Vectorizable,_LhsPacket,LhsScalar>::type LhsPacket;
      |                                                                         ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:460:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:460:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:460:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:461:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  461 |   typedef typename conditional<Vectorizable,_RhsPacket,RhsScalar>::type RhsPacket;
      |                                                                         ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:461:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:461:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:461:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:462:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  462 |   typedef typename conditional<Vectorizable,_ResPacket,ResScalar>::type ResPacket;
      |                                                                         ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:462:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:462:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:462:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  465 |   typedef QuadPacket<RhsPacket> RhsPacketx4;
      |                                 ^~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of ‘class Eigen::internal::gebp_traits<double, double, false, false, 1, 1>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1080:42:   required from ‘struct Eigen::internal::gebp_kernel<double, double, long int, Eigen::internal::blas_data_mapper<double, long int, 0, 0, 1>, 4, 4, false, false>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:  1080 |   typedef typename HalfTraits::LhsPacket LhsPacketHalf;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:       |                                          ^~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:82:107:   required from ‘static void Eigen::internal::general_matrix_matrix_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, ResInnerStride>::run(Index, Index, Index, const LhsScalar*, Index, const RhsScalar*, Index, ResScalar*, Index, Index, ResScalar, Eigen::internal::level3_blocking<LhsScalar, RhsScalar>&, Eigen::internal::GemmParallelInfo<Index>*) [with Index = long int; LhsScalar = double; int LhsStorageOrder = 1; bool ConjugateLhs = false; RhsScalar = double; int RhsStorageOrder = 0; bool ConjugateRhs = false; int ResInnerStride = 1; ResScalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:    82 |   gebp_kernel<LhsScalar, RhsScalar, Index, ResMapper, Traits::mr, Traits::nr, ConjugateLhs, ConjugateRhs> gebp;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:       |                                                                                                           ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:230:14:   required from ‘void Eigen::internal::gemm_functor<Scalar, Index, Gemm, Lhs, Rhs, Dest, BlockingType>::operator()(Index, Index, Index, Index, Eigen::internal::GemmParallelInfo<Index>*) const [with Scalar = double; Index = long int; Gemm = Eigen::internal::general_matrix_matrix_product<long int, double, 1, false, double, 0, false, 0, 1>; Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, -1>; Dest = Eigen::Matrix<double, -1, -1>; BlockingType = Eigen::internal::gemm_blocking_space<0, double, double, -1, -1, -1, 1, false>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:   230 |     Gemm::run(rows, cols, m_lhs.cols(),
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
     231 |               &m_lhs.coeffRef(row,0), m_lhs.outerStride(),
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
     232 |               &m_rhs.coeffRef(0,col), m_rhs.outerStride(),
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
     233 |               (Scalar*)&(m_dest.coeffRef(row,col)), m_dest.innerStride(), m_dest.outerStride(),
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
     234 |               m_actualAlpha, m_blocking, info);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/Parallelizer.h:114:7:   required from ‘void Eigen::internal::parallelize_gemm(const Functor&, Index, Index, Index, bool) [with bool Condition = true; Functor = gemm_functor<double, long int, general_matrix_matrix_product<long int, double, 1, false, double, 0, false, 0, 1>, Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, Eigen::Matrix<double, -1, -1>, gemm_blocking_space<0, double, double, -1, -1, -1, 1, false> >; Index = long int]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:   114 |   func(0,rows, 0,cols);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:       |   ~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:509:9:   required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, -1>; Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:   508 |     internal::parallelize_gemm<(Dest::MaxRowsAtCompileTime>32 || Dest::MaxRowsAtCompileTime==Dynamic)>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
     509 |         (GemmFunctor(lhs, rhs, dst, actualAlpha, blocking), a_lhs.rows(), a_rhs.cols(), a_lhs.cols(), Dest::Flags&RowMajorBit);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:       |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:445:20:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:   954 |     call_dense_assignment_loop(dst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:   890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:       |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:   797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:   594 |       _set_noalias(other);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:       |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:   423 |       : Base(other.derived())
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:       |                             ^
data_manipulation.cpp:231:70:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:   231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:       |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:425:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  425 |   PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:425:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  425 |   PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:425:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  425 |   PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:425:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  425 |   PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:426:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  426 |   PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:426:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  426 |   PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:426:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  426 |   PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:426:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  426 |   PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:427:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  427 |   PACKET_DECL_COND_PREFIX(_, Res, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:427:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  427 |   PACKET_DECL_COND_PREFIX(_, Res, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:427:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  427 |   PACKET_DECL_COND_PREFIX(_, Res, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:427:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  427 |   PACKET_DECL_COND_PREFIX(_, Res, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:49: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  432 |     Vectorizable = unpacket_traits<_LhsPacket>::vectorizable && unpacket_traits<_RhsPacket>::vectorizable,
      |                                                 ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:49: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:49: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:49: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:94: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  432 |     Vectorizable = unpacket_traits<_LhsPacket>::vectorizable && unpacket_traits<_RhsPacket>::vectorizable,
      |                                                                                              ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:94: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:94: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:94: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:433:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  433 |     LhsPacketSize = Vectorizable ? unpacket_traits<_LhsPacket>::size : 1,
      |                                                                 ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:433:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:433:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:433:65: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:434:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  434 |     RhsPacketSize = Vectorizable ? unpacket_traits<_RhsPacket>::size : 1,
      |                                                                 ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:434:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:434:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:434:65: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:435:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  435 |     ResPacketSize = Vectorizable ? unpacket_traits<_ResPacket>::size : 1,
      |                                                                 ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:435:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:435:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:435:65: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:460:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  460 |   typedef typename conditional<Vectorizable,_LhsPacket,LhsScalar>::type LhsPacket;
      |                                                                         ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:460:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:460:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:460:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:461:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  461 |   typedef typename conditional<Vectorizable,_RhsPacket,RhsScalar>::type RhsPacket;
      |                                                                         ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:461:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:461:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:461:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:462:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  462 |   typedef typename conditional<Vectorizable,_ResPacket,ResScalar>::type ResPacket;
      |                                                                         ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:462:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:462:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:462:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  465 |   typedef QuadPacket<RhsPacket> RhsPacketx4;
      |                                 ^~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of ‘class Eigen::internal::gebp_traits<double, double, false, false, 1, 2>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1085:45:   required from ‘struct Eigen::internal::gebp_kernel<double, double, long int, Eigen::internal::blas_data_mapper<double, long int, 0, 0, 1>, 4, 4, false, false>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:  1085 |   typedef typename QuarterTraits::LhsPacket LhsPacketQuarter;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:       |                                             ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:82:107:   required from ‘static void Eigen::internal::general_matrix_matrix_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, ResInnerStride>::run(Index, Index, Index, const LhsScalar*, Index, const RhsScalar*, Index, ResScalar*, Index, Index, ResScalar, Eigen::internal::level3_blocking<LhsScalar, RhsScalar>&, Eigen::internal::GemmParallelInfo<Index>*) [with Index = long int; LhsScalar = double; int LhsStorageOrder = 1; bool ConjugateLhs = false; RhsScalar = double; int RhsStorageOrder = 0; bool ConjugateRhs = false; int ResInnerStride = 1; ResScalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:    82 |   gebp_kernel<LhsScalar, RhsScalar, Index, ResMapper, Traits::mr, Traits::nr, ConjugateLhs, ConjugateRhs> gebp;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:       |                                                                                                           ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:230:14:   required from ‘void Eigen::internal::gemm_functor<Scalar, Index, Gemm, Lhs, Rhs, Dest, BlockingType>::operator()(Index, Index, Index, Index, Eigen::internal::GemmParallelInfo<Index>*) const [with Scalar = double; Index = long int; Gemm = Eigen::internal::general_matrix_matrix_product<long int, double, 1, false, double, 0, false, 0, 1>; Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, -1>; Dest = Eigen::Matrix<double, -1, -1>; BlockingType = Eigen::internal::gemm_blocking_space<0, double, double, -1, -1, -1, 1, false>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:   230 |     Gemm::run(rows, cols, m_lhs.cols(),
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
     231 |               &m_lhs.coeffRef(row,0), m_lhs.outerStride(),
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
     232 |               &m_rhs.coeffRef(0,col), m_rhs.outerStride(),
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
     233 |               (Scalar*)&(m_dest.coeffRef(row,col)), m_dest.innerStride(), m_dest.outerStride(),
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
     234 |               m_actualAlpha, m_blocking, info);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/Parallelizer.h:114:7:   required from ‘void Eigen::internal::parallelize_gemm(const Functor&, Index, Index, Index, bool) [with bool Condition = true; Functor = gemm_functor<double, long int, general_matrix_matrix_product<long int, double, 1, false, double, 0, false, 0, 1>, Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, Eigen::Matrix<double, -1, -1>, gemm_blocking_space<0, double, double, -1, -1, -1, 1, false> >; Index = long int]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:   114 |   func(0,rows, 0,cols);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:       |   ~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:509:9:   required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, -1>; Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:   508 |     internal::parallelize_gemm<(Dest::MaxRowsAtCompileTime>32 || Dest::MaxRowsAtCompileTime==Dynamic)>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
     509 |         (GemmFunctor(lhs, rhs, dst, actualAlpha, blocking), a_lhs.rows(), a_rhs.cols(), a_lhs.cols(), Dest::Flags&RowMajorBit);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:       |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:445:20:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:   954 |     call_dense_assignment_loop(dst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:   890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:       |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:   797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:   594 |       _set_noalias(other);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:       |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:   423 |       : Base(other.derived())
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:       |                             ^
data_manipulation.cpp:231:70:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:   231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:       |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:425:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  425 |   PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:425:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  425 |   PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:425:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  425 |   PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:425:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  425 |   PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:426:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  426 |   PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:426:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  426 |   PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:426:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  426 |   PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:426:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  426 |   PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:427:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  427 |   PACKET_DECL_COND_PREFIX(_, Res, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:427:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  427 |   PACKET_DECL_COND_PREFIX(_, Res, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:427:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  427 |   PACKET_DECL_COND_PREFIX(_, Res, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:427:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  427 |   PACKET_DECL_COND_PREFIX(_, Res, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:49: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  432 |     Vectorizable = unpacket_traits<_LhsPacket>::vectorizable && unpacket_traits<_RhsPacket>::vectorizable,
      |                                                 ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:49: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:49: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:49: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:94: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  432 |     Vectorizable = unpacket_traits<_LhsPacket>::vectorizable && unpacket_traits<_RhsPacket>::vectorizable,
      |                                                                                              ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:94: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:94: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:94: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:433:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  433 |     LhsPacketSize = Vectorizable ? unpacket_traits<_LhsPacket>::size : 1,
      |                                                                 ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:433:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:433:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:433:65: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:434:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  434 |     RhsPacketSize = Vectorizable ? unpacket_traits<_RhsPacket>::size : 1,
      |                                                                 ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:434:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:434:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:434:65: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:435:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  435 |     ResPacketSize = Vectorizable ? unpacket_traits<_ResPacket>::size : 1,
      |                                                                 ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:435:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:435:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:435:65: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:460:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  460 |   typedef typename conditional<Vectorizable,_LhsPacket,LhsScalar>::type LhsPacket;
      |                                                                         ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:460:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:460:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:460:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:461:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  461 |   typedef typename conditional<Vectorizable,_RhsPacket,RhsScalar>::type RhsPacket;
      |                                                                         ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:461:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:461:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:461:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:462:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  462 |   typedef typename conditional<Vectorizable,_ResPacket,ResScalar>::type ResPacket;
      |                                                                         ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:462:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:462:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:462:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  465 |   typedef QuadPacket<RhsPacket> RhsPacketx4;
      |                                 ^~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of ‘void Eigen::internal::gemm_pack_lhs<Scalar, Index, DataMapper, Pack1, Pack2, Packet, 1, Conjugate, PanelMode>::operator()(Scalar*, const DataMapper&, Index, Index, Index, Index) [with Scalar = double; Index = long int; DataMapper = Eigen::internal::const_blas_data_mapper<double, long int, 1>; int Pack1 = 4; int Pack2 = 2; Packet = __vector(2) double; bool Conjugate = false; bool PanelMode = false]’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:184:17:   required from ‘static void Eigen::internal::general_matrix_matrix_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, ResInnerStride>::run(Index, Index, Index, const LhsScalar*, Index, const RhsScalar*, Index, ResScalar*, Index, Index, ResScalar, Eigen::internal::level3_blocking<LhsScalar, RhsScalar>&, Eigen::internal::GemmParallelInfo<Index>*) [with Index = long int; LhsScalar = double; int LhsStorageOrder = 1; bool ConjugateLhs = false; RhsScalar = double; int RhsStorageOrder = 0; bool ConjugateRhs = false; int ResInnerStride = 1; ResScalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:   184 |         pack_lhs(blockA, lhs.getSubMapper(i2,k2), actual_kc, actual_mc);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:       |         ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:230:14:   required from ‘void Eigen::internal::gemm_functor<Scalar, Index, Gemm, Lhs, Rhs, Dest, BlockingType>::operator()(Index, Index, Index, Index, Eigen::internal::GemmParallelInfo<Index>*) const [with Scalar = double; Index = long int; Gemm = Eigen::internal::general_matrix_matrix_product<long int, double, 1, false, double, 0, false, 0, 1>; Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, -1>; Dest = Eigen::Matrix<double, -1, -1>; BlockingType = Eigen::internal::gemm_blocking_space<0, double, double, -1, -1, -1, 1, false>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:   230 |     Gemm::run(rows, cols, m_lhs.cols(),
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
     231 |               &m_lhs.coeffRef(row,0), m_lhs.outerStride(),
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
     232 |               &m_rhs.coeffRef(0,col), m_rhs.outerStride(),
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
     233 |               (Scalar*)&(m_dest.coeffRef(row,col)), m_dest.innerStride(), m_dest.outerStride(),
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
     234 |               m_actualAlpha, m_blocking, info);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/Parallelizer.h:114:7:   required from ‘void Eigen::internal::parallelize_gemm(const Functor&, Index, Index, Index, bool) [with bool Condition = true; Functor = gemm_functor<double, long int, general_matrix_matrix_product<long int, double, 1, false, double, 0, false, 0, 1>, Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, Eigen::Matrix<double, -1, -1>, gemm_blocking_space<0, double, double, -1, -1, -1, 1, false> >; Index = long int]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:   114 |   func(0,rows, 0,cols);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:       |   ~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:509:9:   required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, -1>; Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:   508 |     internal::parallelize_gemm<(Dest::MaxRowsAtCompileTime>32 || Dest::MaxRowsAtCompileTime==Dynamic)>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
     509 |         (GemmFunctor(lhs, rhs, dst, actualAlpha, blocking), a_lhs.rows(), a_rhs.cols(), a_lhs.cols(), Dest::Flags&RowMajorBit);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:       |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:445:20:   required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:   445 |       scaleAndAddTo(dst, lhs, rhs, Scalar(1));
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:       |       ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:124:75:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:   954 |     call_dense_assignment_loop(dst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:   890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:       |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:   797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:   594 |       _set_noalias(other);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:       |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:   423 |       : Base(other.derived())
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:       |                             ^
data_manipulation.cpp:231:70:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:   231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning:       |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2256:82: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
 2256 |   typedef typename unpacket_traits<typename unpacket_traits<Packet>::half>::half QuarterPacket;
      |                                                                                  ^~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2258:56: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
 2258 |          HalfPacketSize = unpacket_traits<HalfPacket>::size,
      |                                                        ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2259:62: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
 2259 |          QuarterPacketSize = unpacket_traits<QuarterPacket>::size,
      |                                                              ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2259:62: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2298:39: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
 2298 |               PacketBlock<HalfPacket> kernel_half;
      |                                       ^~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2298:39: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2304:42: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
 2304 |               PacketBlock<QuarterPacket> kernel_quarter;
      |                                          ^~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2304:42: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2304:42: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2304:42: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of ‘void Eigen::internal::gemm_pack_rhs<Scalar, Index, DataMapper, nr, 0, Conjugate, PanelMode>::operator()(Scalar*, const DataMapper&, Index, Index, Index, Index) [with Scalar = double; Index = long int; DataMapper = Eigen::internal::const_blas_data_mapper<double, long int, 0>; int nr = 4; bool Conjugate = false; bool PanelMode = false]’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:195:21:   required from ‘static void Eigen::internal::general_matrix_matrix_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, ResInnerStride>::run(Index, Index, Index, const LhsScalar*, Index, const RhsScalar*, Index, ResScalar*, Index, Index, ResScalar, Eigen::internal::level3_blocking<LhsScalar, RhsScalar>&, Eigen::internal::GemmParallelInfo<Index>*) [with Index = long int; LhsScalar = double; int LhsStorageOrder = 1; bool ConjugateLhs = false; RhsScalar = double; int RhsStorageOrder = 0; bool ConjugateRhs = false; int ResInnerStride = 1; ResScalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2304:42: warning:   195 |             pack_rhs(blockB, rhs.getSubMapper(k2,j2), actual_kc, actual_nc);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2304:42: warning:       |             ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:230:14:   required from ‘void Eigen::internal::gemm_functor<Scalar, Index, Gemm, Lhs, Rhs, Dest, BlockingType>::operator()(Index, Index, Index, Index, Eigen::internal::GemmParallelInfo<Index>*) const [with Scalar = double; Index = long int; Gemm = Eigen::internal::general_matrix_matrix_product<long int, double, 1, false, double, 0, false, 0, 1>; Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, -1>; Dest = Eigen::Matrix<double, -1, -1>; BlockingType = Eigen::internal::gemm_blocking_space<0, double, double, -1, -1, -1, 1, false>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2304:42: warning:   230 |     Gemm::run(rows, cols, m_lhs.cols(),
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2304:42: warning:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
     231 |               &m_lhs.coeffRef(row,0), m_lhs.outerStride(),
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2304:42: warning:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
     232 |               &m_rhs.coeffRef(0,col), m_rhs.outerStride(),
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2304:42: warning:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
     233 |               (Scalar*)&(m_dest.coeffRef(row,col)), m_dest.innerStride(), m_dest.outerStride(),
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2304:42: warning:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
     234 |               m_actualAlpha, m_blocking, info);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2304:42: warning:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/Parallelizer.h:114:7:   required from ‘void Eigen::internal::parallelize_gemm(const Functor&, Index, Index, Index, bool) [with bool Condition = true; Functor = gemm_functor<double, long int, general_matrix_matrix_product<long int, double, 1, false, double, 0, false, 0, 1>, Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, Eigen::Matrix<double, -1, -1>, gemm_blocking_space<0, double, double, -1, -1, -1, 1, false> >; Index = long int]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2304:42: warning:   114 |   func(0,rows, 0,cols);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2304:42: warning:       |   ~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:509:9:   required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, -1>; Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2304:42: warning:   508 |     internal::parallelize_gemm<(Dest::MaxRowsAtCompileTime>32 || Dest::MaxRowsAtCompileTime==Dynamic)>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2304:42: warning:       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
     509 |         (GemmFunctor(lhs, rhs, dst, actualAlpha, blocking), a_lhs.rows(), a_rhs.cols(), a_lhs.cols(), Dest::Flags&RowMajorBit);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2304:42: warning:       |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:445:20:   required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2304:42: warning:   445 |       scaleAndAddTo(dst, lhs, rhs, Scalar(1));
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2304:42: warning:       |       ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:124:75:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2304:42: warning:   954 |     call_dense_assignment_loop(dst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2304:42: warning:       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2304:42: warning:   890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2304:42: warning:       |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2304:42: warning:   797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2304:42: warning:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2304:42: warning:   594 |       _set_noalias(other);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2304:42: warning:       |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2304:42: warning:   423 |       : Base(other.derived())
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2304:42: warning:       |                             ^
data_manipulation.cpp:231:70:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2304:42: warning:   231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2304:42: warning:       |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2459:62: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
 2459 |           PacketBlock<Packet,(PacketSize%4)==0?4:PacketSize> kernel;
      |                                                              ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of ‘void Eigen::internal::gebp_kernel<LhsScalar, RhsScalar, Index, DataMapper, mr, nr, ConjugateLhs, ConjugateRhs>::operator()(const DataMapper&, const LhsScalar*, const RhsScalar*, Index, Index, Index, ResScalar, Index, Index, Index, Index) [with LhsScalar = double; RhsScalar = double; Index = long int; DataMapper = Eigen::internal::blas_data_mapper<double, long int, 0, 0, 1>; int mr = 4; int nr = 4; bool ConjugateLhs = false; bool ConjugateRhs = false; ResScalar = double]’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:198:15:   required from ‘static void Eigen::internal::general_matrix_matrix_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, ResInnerStride>::run(Index, Index, Index, const LhsScalar*, Index, const RhsScalar*, Index, ResScalar*, Index, Index, ResScalar, Eigen::internal::level3_blocking<LhsScalar, RhsScalar>&, Eigen::internal::GemmParallelInfo<Index>*) [with Index = long int; LhsScalar = double; int LhsStorageOrder = 1; bool ConjugateLhs = false; RhsScalar = double; int RhsStorageOrder = 0; bool ConjugateRhs = false; int ResInnerStride = 1; ResScalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2459:62: warning:   198 |           gebp(res.getSubMapper(i2, j2), blockA, blockB, actual_mc, actual_kc, actual_nc, alpha);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2459:62: warning:       |           ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:230:14:   required from ‘void Eigen::internal::gemm_functor<Scalar, Index, Gemm, Lhs, Rhs, Dest, BlockingType>::operator()(Index, Index, Index, Index, Eigen::internal::GemmParallelInfo<Index>*) const [with Scalar = double; Index = long int; Gemm = Eigen::internal::general_matrix_matrix_product<long int, double, 1, false, double, 0, false, 0, 1>; Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, -1>; Dest = Eigen::Matrix<double, -1, -1>; BlockingType = Eigen::internal::gemm_blocking_space<0, double, double, -1, -1, -1, 1, false>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2459:62: warning:   230 |     Gemm::run(rows, cols, m_lhs.cols(),
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2459:62: warning:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
     231 |               &m_lhs.coeffRef(row,0), m_lhs.outerStride(),
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2459:62: warning:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
     232 |               &m_rhs.coeffRef(0,col), m_rhs.outerStride(),
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2459:62: warning:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
     233 |               (Scalar*)&(m_dest.coeffRef(row,col)), m_dest.innerStride(), m_dest.outerStride(),
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2459:62: warning:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
     234 |               m_actualAlpha, m_blocking, info);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2459:62: warning:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/Parallelizer.h:114:7:   required from ‘void Eigen::internal::parallelize_gemm(const Functor&, Index, Index, Index, bool) [with bool Condition = true; Functor = gemm_functor<double, long int, general_matrix_matrix_product<long int, double, 1, false, double, 0, false, 0, 1>, Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, Eigen::Matrix<double, -1, -1>, gemm_blocking_space<0, double, double, -1, -1, -1, 1, false> >; Index = long int]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2459:62: warning:   114 |   func(0,rows, 0,cols);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2459:62: warning:       |   ~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:509:9:   required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, -1>; Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2459:62: warning:   508 |     internal::parallelize_gemm<(Dest::MaxRowsAtCompileTime>32 || Dest::MaxRowsAtCompileTime==Dynamic)>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2459:62: warning:       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
     509 |         (GemmFunctor(lhs, rhs, dst, actualAlpha, blocking), a_lhs.rows(), a_rhs.cols(), a_lhs.cols(), Dest::Flags&RowMajorBit);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2459:62: warning:       |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:445:20:   required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2459:62: warning:   445 |       scaleAndAddTo(dst, lhs, rhs, Scalar(1));
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2459:62: warning:       |       ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:124:75:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2459:62: warning:   954 |     call_dense_assignment_loop(dst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2459:62: warning:       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2459:62: warning:   890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2459:62: warning:       |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2459:62: warning:   797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2459:62: warning:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2459:62: warning:   594 |       _set_noalias(other);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2459:62: warning:       |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2459:62: warning:   423 |       : Base(other.derived())
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2459:62: warning:       |                             ^
data_manipulation.cpp:231:70:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2459:62: warning:   231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2459:62: warning:       |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1920:103: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
 1920 |           const int SResPacketHalfSize = unpacket_traits<typename unpacket_traits<SResPacket>::half>::size;
      |                                                                                                       ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1921:138: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
 1921 |           const int SResPacketQuarterSize = unpacket_traits<typename unpacket_traits<typename unpacket_traits<SResPacket>::half>::half>::size;
      |                                                                                                                                          ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1921:138: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1977:135: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
 1977 |               typedef typename conditional<SwappedTraits::LhsProgress>=8,typename unpacket_traits<SResPacket>::half,SResPacket>::type SResPacketHalf;
      |                                                                                                                                       ^~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1978:135: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
 1978 |               typedef typename conditional<SwappedTraits::LhsProgress>=8,typename unpacket_traits<SLhsPacket>::half,SLhsPacket>::type SLhsPacketHalf;
      |                                                                                                                                       ^~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1979:135: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
 1979 |               typedef typename conditional<SwappedTraits::LhsProgress>=8,typename unpacket_traits<SRhsPacket>::half,SRhsPacket>::type SRhsPacketHalf;
      |                                                                                                                                       ^~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1980:135: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
 1980 |               typedef typename conditional<SwappedTraits::LhsProgress>=8,typename unpacket_traits<SAccPacket>::half,SAccPacket>::type SAccPacketHalf;
      |                                                                                                                                       ^~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true> >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8:   required from ‘struct Eigen::internal::evaluator<const Eigen::Block<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1980:135: warning:   100 | struct evaluator<const T>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1980:135: warning:       |        ^~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:78:   required from ‘struct Eigen::internal::binary_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, const Eigen::Block<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1980:135: warning:   739 |     CoeffReadCost = int(evaluator<Lhs>::CoeffReadCost) + int(evaluator<Rhs>::CoeffReadCost) + int(functor_traits<BinaryOp>::Cost),
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1980:135: warning:       |                                                                              ^~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8:   required from ‘struct Eigen::internal::evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, const Eigen::Block<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1980:135: warning:   722 | struct evaluator<CwiseBinaryOp<BinaryOp, Lhs, Rhs> >
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1980:135: warning:       |        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:357:7:   required from ‘class Eigen::internal::redux_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, const Eigen::Block<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1980:135: warning:   357 | class redux_evaluator : public internal::evaluator<_XprType>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1980:135: warning:       |       ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:414:17:   required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, const Eigen::Block<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true> >; typename Eigen::internal::traits<T>::Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1980:135: warning:   414 |   ThisEvaluator thisEval(derived());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1980:135: warning:       |                 ^~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25:   [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1980:135: warning:   954 |     call_dense_assignment_loop(dst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1980:135: warning:       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1980:135: warning:   890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1980:135: warning:       |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1980:135: warning:   797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1980:135: warning:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1980:135: warning:   594 |       _set_noalias(other);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1980:135: warning:       |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1980:135: warning:   423 |       : Base(other.derived())
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1980:135: warning:       |                             ^
data_manipulation.cpp:231:70:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1980:135: warning:   231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1980:135: warning:       |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
 1071 |     PacketAlignment = unpacket_traits<PacketScalar>::alignment,
      |                                                      ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true> >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8:   required from ‘struct Eigen::internal::evaluator<const Eigen::Block<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   100 | struct evaluator<const T>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |        ^~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:311:41:   required from ‘struct Eigen::internal::unary_evaluator<Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true> >, Eigen::internal::IndexBased, double>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   311 |     CoeffReadCost = evaluator<ArgType>::CoeffReadCost,
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |                                         ^~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8:   required from ‘struct Eigen::internal::evaluator<Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:    90 | struct evaluator : public unary_evaluator<T>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |        ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8:   required from ‘struct Eigen::internal::evaluator<const Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   100 | struct evaluator<const T>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |        ^~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:41:   required from ‘struct Eigen::internal::binary_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   739 |     CoeffReadCost = int(evaluator<Lhs>::CoeffReadCost) + int(evaluator<Rhs>::CoeffReadCost) + int(functor_traits<BinaryOp>::Cost),
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |                                         ^~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8:   [ skipping 16 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   954 |     call_dense_assignment_loop(dst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   594 |       _set_noalias(other);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   423 |       : Base(other.derived())
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |                             ^
data_manipulation.cpp:231:70:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
 1071 |     PacketAlignment = unpacket_traits<PacketScalar>::alignment,
      |                                                      ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, Eigen::Dense>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   148 | class CwiseBinaryOpImpl
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |       ^~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:    77 | class CwiseBinaryOp :
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |       ^~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:606:52:   required from ‘const Eigen::internal::product_evaluator<Eigen::Product<Lhs, Rhs, 1>, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::CoeffReturnType Eigen::internal::product_evaluator<Eigen::Product<Lhs, Rhs, 1>, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::coeff(Eigen::Index, Eigen::Index) const [with Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, -1>; int ProductTag = 8; typename Eigen::internal::traits<typename Eigen::Product<Lhs, Rhs, 1>::Lhs>::Scalar = double; typename Eigen::Product<Lhs, Rhs, 1>::Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; typename Eigen::internal::traits<typename Eigen::Product<Lhs, Rhs, 1>::Rhs>::Scalar = double; typename Eigen::Product<Lhs, Rhs, 1>::Rhs = Eigen::Matrix<double, -1, -1>; CoeffReturnType = double; Eigen::Index = long int]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   606 |     return (m_lhs.row(row).transpose().cwiseProduct( m_rhs.col(col) )).sum();
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:654:63:   [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   954 |     call_dense_assignment_loop(dst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   594 |       _set_noalias(other);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   423 |       : Base(other.derived())
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |                             ^
data_manipulation.cpp:231:70:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase<Derived>&) [with Derived = Eigen::CwiseBinaryOp<scalar_conj_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, const Eigen::Block<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true> >; Eigen::Index = long int]’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:243:63:   required from ‘static Eigen::internal::redux_impl<Func, Evaluator, 3, 0>::Scalar Eigen::internal::redux_impl<Func, Evaluator, 3, 0>::run(const Evaluator&, const Func&, const XprType&) [with XprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, const Eigen::Block<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true> >; Func = Eigen::internal::scalar_sum_op<double, double>; Evaluator = Eigen::internal::redux_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, const Eigen::Block<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true> > >; Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   243 |     const Index alignedStart = internal::first_default_aligned(xpr);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56:   required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, const Eigen::Block<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true> >; typename Eigen::internal::traits<T>::Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   418 |   return internal::redux_impl<Func, ThisEvaluator>::run(thisEval, func, derived());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25:   required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, const Eigen::Block<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true> >; typename Eigen::internal::traits<T>::Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   463 |   return derived().redux(Eigen::internal::scalar_sum_op<Scalar,Scalar>());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |          ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:50:63:   required from ‘static Eigen::internal::dot_nocheck<T, U, true>::ResScalar Eigen::internal::dot_nocheck<T, U, true>::run(const Eigen::MatrixBase<Derived>&, const Eigen::MatrixBase<U>&) [with T = Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>; U = Eigen::Block<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true>; ResScalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    50 |     return a.transpose().template binaryExpr<conj_prod>(b).sum();
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:84:58:   required from ‘typename Eigen::ScalarBinaryOpTraits<typename Eigen::internal::traits<T>::Scalar, typename Eigen::internal::traits<OtherDerived>::Scalar>::ReturnType Eigen::MatrixBase<Derived>::dot(const Eigen::MatrixBase<OtherDerived>&) const [with OtherDerived = Eigen::Block<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true>; Derived = Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>; typename Eigen::ScalarBinaryOpTraits<typename Eigen::internal::traits<T>::Scalar, typename Eigen::internal::traits<OtherDerived>::Scalar>::ReturnType = double; typename Eigen::internal::traits<T>::Scalar = double; typename Eigen::internal::traits<OtherDerived>::Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    84 |   return internal::dot_nocheck<Derived,OtherDerived>::run(*this, other);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:380:62:   [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   954 |     call_dense_assignment_loop(dst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   594 |       _set_noalias(other);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   423 |       : Base(other.derived())
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                             ^
data_manipulation.cpp:231:70:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  654 |   return internal::first_aligned<int(unpacket_traits<DefaultPacketType>::alignment),Derived>(m);
      |                                                                          ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase<Derived>&) [with Derived = Eigen::CwiseBinaryOp<scalar_conj_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >; Eigen::Index = long int]’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:243:63:   required from ‘static Eigen::internal::redux_impl<Func, Evaluator, 3, 0>::Scalar Eigen::internal::redux_impl<Func, Evaluator, 3, 0>::run(const Evaluator&, const Func&, const XprType&) [with XprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >; Func = Eigen::internal::scalar_sum_op<double, double>; Evaluator = Eigen::internal::redux_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> > >; Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:   243 |     const Index alignedStart = internal::first_default_aligned(xpr);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:       |                                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56:   required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >; typename Eigen::internal::traits<T>::Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:   418 |   return internal::redux_impl<Func, ThisEvaluator>::run(thisEval, func, derived());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:       |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25:   required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >; typename Eigen::internal::traits<T>::Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:   463 |   return derived().redux(Eigen::internal::scalar_sum_op<Scalar,Scalar>());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:       |          ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:50:63:   required from ‘static Eigen::internal::dot_nocheck<T, U, true>::ResScalar Eigen::internal::dot_nocheck<T, U, true>::run(const Eigen::MatrixBase<Derived>&, const Eigen::MatrixBase<U>&) [with T = Eigen::Block<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true>; U = Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>; ResScalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:    50 |     return a.transpose().template binaryExpr<conj_prod>(b).sum();
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:       |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:84:58:   required from ‘typename Eigen::ScalarBinaryOpTraits<typename Eigen::internal::traits<T>::Scalar, typename Eigen::internal::traits<OtherDerived>::Scalar>::ReturnType Eigen::MatrixBase<Derived>::dot(const Eigen::MatrixBase<OtherDerived>&) const [with OtherDerived = Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>; Derived = Eigen::Block<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true>; typename Eigen::ScalarBinaryOpTraits<typename Eigen::internal::traits<T>::Scalar, typename Eigen::internal::traits<OtherDerived>::Scalar>::ReturnType = double; typename Eigen::internal::traits<T>::Scalar = double; typename Eigen::internal::traits<OtherDerived>::Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:    84 |   return internal::dot_nocheck<Derived,OtherDerived>::run(*this, other);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:       |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:380:62:   [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:   954 |     call_dense_assignment_loop(dst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:   890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:       |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:   797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:   594 |       _set_noalias(other);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:       |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:   423 |       : Base(other.derived())
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:       |                             ^
data_manipulation.cpp:231:70:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:   231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:       |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  654 |   return internal::first_aligned<int(unpacket_traits<DefaultPacketType>::alignment),Derived>(m);
      |                                                                          ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase<Derived>&) [with Derived = Eigen::CwiseBinaryOp<scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >; Eigen::Index = long int]’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:243:63:   required from ‘static Eigen::internal::redux_impl<Func, Evaluator, 3, 0>::Scalar Eigen::internal::redux_impl<Func, Evaluator, 3, 0>::run(const Evaluator&, const Func&, const XprType&) [with XprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >; Func = Eigen::internal::scalar_sum_op<double, double>; Evaluator = Eigen::internal::redux_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> > >; Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:   243 |     const Index alignedStart = internal::first_default_aligned(xpr);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:       |                                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56:   required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >; typename Eigen::internal::traits<T>::Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:   418 |   return internal::redux_impl<Func, ThisEvaluator>::run(thisEval, func, derived());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:       |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25:   required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >; typename Eigen::internal::traits<T>::Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:   463 |   return derived().redux(Eigen::internal::scalar_sum_op<Scalar,Scalar>());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:       |          ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:606:75:   required from ‘const Eigen::internal::product_evaluator<Eigen::Product<Lhs, Rhs, 1>, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::CoeffReturnType Eigen::internal::product_evaluator<Eigen::Product<Lhs, Rhs, 1>, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::coeff(Eigen::Index, Eigen::Index) const [with Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, -1>; int ProductTag = 8; typename Eigen::internal::traits<typename Eigen::Product<Lhs, Rhs, 1>::Lhs>::Scalar = double; typename Eigen::Product<Lhs, Rhs, 1>::Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; typename Eigen::internal::traits<typename Eigen::Product<Lhs, Rhs, 1>::Rhs>::Scalar = double; typename Eigen::Product<Lhs, Rhs, 1>::Rhs = Eigen::Matrix<double, -1, -1>; CoeffReturnType = double; Eigen::Index = long int]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:   606 |     return (m_lhs.row(row).transpose().cwiseProduct( m_rhs.col(col) )).sum();
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:       |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:654:63:   required from ‘void Eigen::internal::generic_dense_assignment_kernel<DstEvaluatorTypeT, SrcEvaluatorTypeT, Functor, Version>::assignCoeff(Eigen::Index, Eigen::Index) [with DstEvaluatorTypeT = Eigen::internal::evaluator<Eigen::Matrix<double, -1, -1> >; SrcEvaluatorTypeT = Eigen::internal::evaluator<Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 1> >; Functor = Eigen::internal::assign_op<double, double>; int Version = 1; Eigen::Index = long int]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:   654 |     m_functor.assignCoeff(m_dst.coeffRef(row,col), m_src.coeff(row,col));
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:       |                                                    ~~~~~~~~~~~^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:668:16:   [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:   954 |     call_dense_assignment_loop(dst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:   890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:       |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:   797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:   594 |       _set_noalias(other);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:       |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:   423 |       : Base(other.derived())
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:       |                             ^
data_manipulation.cpp:231:70:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:   231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:       |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  654 |   return internal::first_aligned<int(unpacket_traits<DefaultPacketType>::alignment),Derived>(m);
      |                                                                          ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase<Derived>&) [with Derived = Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>; Eigen::Index = long int]’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:243:63:   required from ‘static Eigen::internal::redux_impl<Func, Evaluator, 3, 0>::Scalar Eigen::internal::redux_impl<Func, Evaluator, 3, 0>::run(const Evaluator&, const Func&, const XprType&) [with XprType = Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>; Func = Eigen::internal::scalar_sum_op<double, double>; Evaluator = Eigen::internal::redux_evaluator<Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >; Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:   243 |     const Index alignedStart = internal::first_default_aligned(xpr);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:       |                                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56:   required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>; typename Eigen::internal::traits<T>::Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:   418 |   return internal::redux_impl<Func, ThisEvaluator>::run(thisEval, func, derived());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:       |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25:   required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>; typename Eigen::internal::traits<T>::Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:   463 |   return derived().redux(Eigen::internal::scalar_sum_op<Scalar,Scalar>());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:       |          ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:114:1:   required from ‘ResultType Eigen::internal::member_sum<ResultType, Scalar>::operator()(const XprType&) const [with XprType = Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>; ResultType = double; Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:    97 |     { return mat.MEMBER(); }                                                                \
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:       |              ~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PartialReduxEvaluator.h:183:21:   required from ‘const Eigen::internal::evaluator<Eigen::PartialReduxExpr<MatrixType, MemberOp, Direction> >::Scalar Eigen::internal::evaluator<Eigen::PartialReduxExpr<MatrixType, MemberOp, Direction> >::coeff(Eigen::Index) const [with ArgType = Eigen::Matrix<double, -1, -1>; MemberOp = Eigen::internal::member_sum<double, double>; int Direction = 0; Scalar = double; Eigen::Index = long int]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:   183 |     return m_functor(m_arg.template subVector<DirectionType(Direction)>(index));
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:       |            ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:775:40:   [ skipping 17 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Replicate<Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, member_sum<double, double>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > >, -1, 1> >; Func = assign_op<double, double>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:   890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:       |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:858:27:   required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing<Src>::value), void*>::type) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Replicate<Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, member_sum<double, double>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > >, -1, 1> >; Func = assign_op<double, double>; typename enable_if<(! evaluator_assume_aliasing<Src>::value), void*>::type = void*; typename evaluator_traits<SrcXprType>::Shape = Eigen::DenseShape]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:   858 |   call_assignment_no_alias(dst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:       |   ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18:   required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Replicate<Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, member_sum<double, double>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > >, -1, 1> >]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:   836 |   call_assignment(dst, src, internal::assign_op<typename Dst::Scalar,typename Src::Scalar>());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:       |   ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Replicate<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > >, -1, 1> >; Derived = Eigen::Matrix<double, -1, -1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:   779 |       internal::call_assignment(this->derived(), other.derived());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Replicate<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > >, -1, 1> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:   225 |       return Base::_set(other);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:       |              ~~~~~~~~~~^~~~~~~
data_manipulation.cpp:229:46:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:   229 |     mat = mat.rowwise() - mat.colwise().mean();
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:       |                                              ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  654 |   return internal::first_aligned<int(unpacket_traits<DefaultPacketType>::alignment),Derived>(m);
      |                                                                          ^~~~~~~~~
g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG  -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppEigen/include' -I'/usr/local/lib/R/library/RcppProgress/include' -I/usr/local/include    -fpic  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer    -c fast_NN_dist.cpp -o fast_NN_dist.o
fast_NN_dist.cpp: In function ‘Rcpp::List fast_dist(Rcpp::NumericMatrix, Rcpp::NumericMatrix, Rcpp::List)’:
fast_NN_dist.cpp:37:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   37 |   if (x.nrow() != ngraph_size) { return List(); }
      |       ~~~~~~~~~^~~~~~~~~~~~~~
fast_NN_dist.cpp:51:23: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare]
   51 |     for (size_t j=0; j<neighbors.size(); ++j) {
      |                      ~^~~~~~~~~~~~~~~~~
g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG  -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppEigen/include' -I'/usr/local/lib/R/library/RcppProgress/include' -I/usr/local/include    -fpic  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer    -c integration.cpp -o integration.o
In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:205,
                 from /usr/local/lib/R/library/RcppEigen/include/Eigen/Dense:1,
                 from /usr/local/lib/R/library/RcppEigen/include/RcppEigenForward.h:28,
                 from /usr/local/lib/R/library/RcppEigen/include/RcppEigen.h:25,
                 from integration.cpp:1:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
   46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i;
      |                                        ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
   47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b;
      |                                        ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes]
   49 | template<> struct is_arithmetic<__m128>  { enum { value = true }; };
      |                                       ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
   50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; };
      |                                        ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes]
   51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; };
      |                                        ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
  222 | template<> struct unpacket_traits<Packet4f> {
      |                                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
  228 | template<> struct unpacket_traits<Packet2d> {
      |                                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
 1124 | ptranspose(PacketBlock<Packet4f,4>& kernel) {
      |                                  ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
 1129 | ptranspose(PacketBlock<Packet2d,2>& kernel) {
      |                                  ^
In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:174:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
   16 |   struct conj_helper<PACKET_REAL, PACKET_CPLX, false, false> {          \
      |                                                            ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
   29 |   struct conj_helper<PACKET_CPLX, PACKET_REAL, false, false> {          \
      |                                                            ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
   16 |   struct conj_helper<PACKET_REAL, PACKET_CPLX, false, false> {          \
      |                                                            ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
   29 |   struct conj_helper<PACKET_CPLX, PACKET_REAL, false, false> {          \
      |                                                            ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:165:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<float, 4>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits<Eigen::Matrix<float, 4, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning:    22 |   typedef typename find_best_packet<_Scalar,size>::type PacketScalar;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning:       |                                                         ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49:   required from ‘struct Eigen::internal::traits<Eigen::Quaternion<float> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning:   266 |     Alignment = internal::traits<Coefficients>::Alignment,
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning:       |                                                 ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning:    24 |     ResAlignment = traits<Quaternion<float> >::Alignment
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning:       |                                              ^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
  208 |   typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
      |                                                                                        ^~~~
In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:271:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:   302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 3>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:   555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<float, 4, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<float, 4, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<float, 4, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<float, 4, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:   178 | class Matrix
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50:   required from ‘class Eigen::QuaternionBase<Eigen::Quaternion<float> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    46 |   typedef typename Coefficients::CoeffReturnType CoeffReturnType;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |                                                  ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7:   required from ‘class Eigen::Quaternion<float>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:   273 | class Quaternion : public QuaternionBase<Quaternion<_Scalar,_Options> >
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    27 |   {
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |   ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 4>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 4, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    22 |   typedef typename find_best_packet<_Scalar,size>::type PacketScalar;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                         ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49:   required from ‘struct Eigen::internal::traits<Eigen::Quaternion<double> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   266 |     Alignment = internal::traits<Coefficients>::Alignment,
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                 ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    98 |     ResAlignment = traits<Quaternion<double> >::Alignment
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                               ^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  208 |   typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
      |                                                                                        ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:   302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 3>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:   555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<double, 4, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, 4, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, 4, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<double, 4, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:   178 | class Matrix
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50:   required from ‘class Eigen::QuaternionBase<Eigen::Quaternion<double> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    46 |   typedef typename Coefficients::CoeffReturnType CoeffReturnType;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |                                                  ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7:   required from ‘class Eigen::Quaternion<double>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:   273 | class Quaternion : public QuaternionBase<Quaternion<_Scalar,_Options> >
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:   102 |   {
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |   ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/SparseCore:37,
                 from /usr/local/lib/R/library/RcppEigen/include/Eigen/Sparse:26,
                 from /usr/local/lib/R/library/RcppEigen/include/RcppEigenForward.h:29:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::SparseMatrix<double, 0, int> >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7:   required from ‘class Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 0, int> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    36 | class SparseCompressedBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7:   required from ‘class Eigen::SparseMatrix<double, 0, int>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    96 | class SparseMatrix
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    61 |   typedef Triplet<double> T;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                         ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   47 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, -1>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, -1, -1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:    22 |   typedef typename find_best_packet<_Scalar,size>::type PacketScalar;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |                                                         ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, -1, -1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:    98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |       ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<double, -1, -1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:   178 | class Matrix
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |       ^~~~~~
integration.cpp:23:1:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:    23 | ) {
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       | ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  208 |   typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
      |                                                                                        ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1>, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:   302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1>, 3>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:   555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<double, -1, -1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, -1, -1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, -1, -1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<double, -1, -1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:   178 | class Matrix
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~
integration.cpp:23:1:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    23 | ) {
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       | ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, 1>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, 1>, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, 1>, 3>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<double, -1, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, -1, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, -1, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<double, -1, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   178 | class Matrix
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~
integration.cpp:23:1:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    23 | ) {
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       | ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
integration.cpp: In function ‘Eigen::SparseMatrix<double, 0, int> FindWeightsC(Rcpp::NumericVector, Eigen::MatrixXd, std::vector<std::__cxx11::basic_string<char> >, std::vector<std::__cxx11::basic_string<char> >, Eigen::MatrixXd, Eigen::VectorXd, double, double, bool)’:
integration.cpp:29:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   29 |   for(int i=0; i<anchor_cells2.size(); ++i){
      |                ~^~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 1>’
integration.cpp:29:17: warning:   302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
integration.cpp:29:17: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 3>’
integration.cpp:29:17: warning:   555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
integration.cpp:29:17: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >’
integration.cpp:29:17: warning:    41 | template<typename Derived> class DenseBase
integration.cpp:29:17: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >’
integration.cpp:29:17: warning:    48 | template<typename Derived> class MatrixBase
integration.cpp:29:17: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34:   required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 0>’
integration.cpp:29:17: warning:    37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors>
integration.cpp:29:17: warning:       |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34:   required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 1>’
integration.cpp:29:17: warning:   223 | template<typename Derived> class MapBase<Derived, WriteAccessors>
integration.cpp:29:17: warning:       |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7:   required from ‘class Eigen::internal::BlockImpl_dense<Eigen::Matrix<double, -1, -1>, 1, -1, false, true>’
integration.cpp:29:17: warning:   329 | class BlockImpl_dense<XprType,BlockRows,BlockCols, InnerPanel,true>
integration.cpp:29:17: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7:   required from ‘class Eigen::BlockImpl<Eigen::Matrix<double, -1, -1>, 1, -1, false, Eigen::Dense>’
integration.cpp:29:17: warning:   154 | class BlockImpl<XprType, BlockRows, BlockCols, InnerPanel, Dense>
integration.cpp:29:17: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81:   required from ‘class Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>’
integration.cpp:29:17: warning:   103 | template<typename XprType, int BlockRows, int BlockCols, bool InnerPanel> class Block
integration.cpp:29:17: warning:       |                                                                                 ^~~~~
integration.cpp:43:41:   required from here
integration.cpp:29:17: warning:    43 |     Eigen::VectorXd dist = distances.row(cell);
integration.cpp:29:17: warning:       |                            ~~~~~~~~~~~~~^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
integration.cpp:48:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   48 |       for(int j=0; j<mnn_idx.size() && k<indices.size(); ++j){
      |                    ~^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> > >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7:   required from ‘class Eigen::SparseCompressedBase<Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> > >’
integration.cpp:48:21: warning:    36 | class SparseCompressedBase
integration.cpp:48:21: warning:       |       ^~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseTranspose.h:22:9:   required from ‘class Eigen::internal::SparseTransposeImpl<Eigen::SparseMatrix<double, 0, int>, 1024>’
integration.cpp:48:21: warning:    22 |   class SparseTransposeImpl<MatrixType,CompressedAccessBit>
integration.cpp:48:21: warning:       |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseTranspose.h:45:37:   required from ‘class Eigen::TransposeImpl<Eigen::SparseMatrix<double, 0, int>, Eigen::Sparse>’
integration.cpp:48:21: warning:    45 | template<typename MatrixType> class TransposeImpl<MatrixType,Sparse>
integration.cpp:48:21: warning:       |                                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37:   required from ‘class Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >’
integration.cpp:48:21: warning:    52 | template<typename MatrixType> class Transpose
integration.cpp:48:21: warning:       |                                     ^~~~~~~~~
integration.cpp:60:53:   required from here
integration.cpp:48:21: warning:    60 |     Eigen::VectorXd colSums = dist_weights.transpose() * Eigen::VectorXd::Ones(dist_weights.rows());
integration.cpp:48:21: warning:       |                               ~~~~~~~~~~~~~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   47 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, 1> >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, 1> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, 1> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7:   required from ‘class Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:    60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp<NullaryOp, PlainObjectType> >::type, internal::no_assignment_operator
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |       ^~~~~~~~~~~~~~
integration.cpp:60:79:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:    60 |     Eigen::VectorXd colSums = dist_weights.transpose() * Eigen::VectorXd::Ones(dist_weights.rows());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |                                                          ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Product<Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >, Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, 1> >, 0>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Product<Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >, Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, 1> >, 0> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Product<Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >, Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, 1> >, 0> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7:   required from ‘class Eigen::internal::dense_product_base<Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >, Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, 1> >, 0, 7>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   120 | class dense_product_base
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7:   required from ‘class Eigen::ProductImpl<Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >, Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, 1> >, 0, Eigen::Dense>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   152 | class ProductImpl<Lhs,Rhs,Option,Dense>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7:   required from ‘class Eigen::Product<Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >, Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, 1> >, 0>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    71 | class Product : public ProductImpl<_Lhs,_Rhs,Option,
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~
integration.cpp:60:99:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    60 |     Eigen::VectorXd colSums = dist_weights.transpose() * Eigen::VectorXd::Ones(dist_weights.rows());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                                                                   ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, -1> >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, -1> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, -1> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7:   required from ‘class Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, -1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp<NullaryOp, PlainObjectType> >::type, internal::no_assignment_operator
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~
integration.cpp:68:61:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    68 |     Eigen::MatrixXd dist_weights = Eigen::MatrixXd::Constant(integration_matrix_rownames.size(), cells2.size(), min_dist);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:56:7:   required from ‘class Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    56 | class PartialReduxExpr : public internal::dense_xpr_base< PartialReduxExpr<MatrixType, MemberOp, Direction> >::type,
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~
integration.cpp:77:57:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    77 |     Eigen::VectorXd colSums = dist_weights.colwise().sum();
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                               ~~~~~~~~~~~~~~~~~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::SparseView<Eigen::Matrix<double, -1, -1> > >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseView.h:45:7:   required from ‘class Eigen::SparseView<Eigen::Matrix<double, -1, -1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    45 | class SparseView : public SparseMatrixBase<SparseView<MatrixType> >
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~
integration.cpp:83:41:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    83 |     return_mat = dist_weights.sparseView();
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                  ~~~~~~~~~~~~~~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   47 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::Product<Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >, Eigen::SparseMatrix<double, 0, int>, 2> >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:145:7:   required from ‘class Eigen::ProductImpl<Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >, Eigen::SparseMatrix<double, 0, int>, 2, Eigen::Sparse>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:   145 | class ProductImpl : public internal::generic_xpr_base<Product<Lhs,Rhs,Option>, MatrixXpr, StorageKind>::type
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |       ^~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7:   required from ‘class Eigen::Product<Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >, Eigen::SparseMatrix<double, 0, int>, 2>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:    71 | class Product : public ProductImpl<_Lhs,_Rhs,Option,
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |       ^~~~~~~
integration.cpp:94:85:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:    94 |   Eigen::SparseMatrix<double> corrected = expression_cells2 - weights.transpose() * integration_matrix;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |                                                                                     ^~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   47 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::SparseMatrix<double, 0, int>, const Eigen::Product<Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >, Eigen::SparseMatrix<double, 0, int>, 2> > >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCwiseBinaryOp.h:36:7:   required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_difference_op<double, double>, const Eigen::SparseMatrix<double, 0, int>, const Eigen::Product<Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >, Eigen::SparseMatrix<double, 0, int>, 2>, Eigen::Sparse>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:    36 | class CwiseBinaryOpImpl<BinaryOp, Lhs, Rhs, Sparse>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::SparseMatrix<double, 0, int>, const Eigen::Product<Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >, Eigen::SparseMatrix<double, 0, int>, 2> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:    77 | class CwiseBinaryOp :
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |       ^~~~~~~~~~~~~
integration.cpp:94:85:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:    94 |   Eigen::SparseMatrix<double> corrected = expression_cells2 - weights.transpose() * integration_matrix;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |                                                                                     ^~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   47 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
integration.cpp: In function ‘std::vector<double> ScoreHelper(Eigen::SparseMatrix<double, 0, int>, Eigen::MatrixXd, Eigen::MatrixXd, Eigen::MatrixXd, int, bool, bool)’:
integration.cpp:135:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<long unsigned int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  135 |     if (k_snn_i > nonzero_order.size()) k_snn_i = nonzero_order.size();
      |         ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
integration.cpp:136:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<long unsigned int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  136 |     for (int j = 0; j < nonzero_order.size(); ++j) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~
integration.cpp:139:26: warning: comparison of integer expressions of different signedness: ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  139 |       if(bw_dists.size() < k_snn_i || nonzero[nonzero_order[j]] == nonzero[nonzero_order[k_snn_i-1]]) {
      |          ~~~~~~~~~~~~~~~~^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, 1>’
integration.cpp:139:26: warning:   302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
integration.cpp:139:26: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, 3>’
integration.cpp:139:26: warning:   555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
integration.cpp:139:26: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> >’
integration.cpp:139:26: warning:    41 | template<typename Derived> class DenseBase
integration.cpp:139:26: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> >’
integration.cpp:139:26: warning:    48 | template<typename Derived> class MatrixBase
integration.cpp:139:26: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34:   required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, 0>’
integration.cpp:139:26: warning:    37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors>
integration.cpp:139:26: warning:       |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34:   required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, 1>’
integration.cpp:139:26: warning:   223 | template<typename Derived> class MapBase<Derived, WriteAccessors>
integration.cpp:139:26: warning:       |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7:   required from ‘class Eigen::internal::BlockImpl_dense<Eigen::Matrix<double, -1, -1>, -1, 1, true, true>’
integration.cpp:139:26: warning:   329 | class BlockImpl_dense<XprType,BlockRows,BlockCols, InnerPanel,true>
integration.cpp:139:26: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7:   required from ‘class Eigen::BlockImpl<Eigen::Matrix<double, -1, -1>, -1, 1, true, Eigen::Dense>’
integration.cpp:139:26: warning:   154 | class BlockImpl<XprType, BlockRows, BlockCols, InnerPanel, Dense>
integration.cpp:139:26: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81:   required from ‘class Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>’
integration.cpp:139:26: warning:   103 | template<typename XprType, int BlockRows, int BlockCols, bool InnerPanel> class Block
integration.cpp:139:26: warning:       |                                                                                 ^~~~~
integration.cpp:140:36:   required from here
integration.cpp:139:26: warning:   140 |         double res = (query_pca.col(cell) - query_pca.col(i)).norm();
integration.cpp:139:26: warning:       |                       ~~~~~~~~~~~~~^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, Eigen::Dense>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   148 | class CwiseBinaryOpImpl
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    77 | class CwiseBinaryOp :
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~
integration.cpp:140:60:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   140 |         double res = (query_pca.col(cell) - query_pca.col(i)).norm();
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                            ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
integration.cpp:148:25: warning: comparison of integer expressions of different signedness: ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  148 |     if (bw_dists.size() > k_snn_i) {
      |         ~~~~~~~~~~~~~~~~^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::SparseMatrix<double, 0, int>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:336:80:   required from ‘struct Eigen::internal::evaluator<Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 0, int> > >’
integration.cpp:148:25: warning:   336 |   typedef typename DenseCoeffsBase<Derived,ReadOnlyAccessors>::CoeffReturnType CoeffReturnType;
integration.cpp:148:25: warning:       |                                                                                ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1505:8:   required from ‘struct Eigen::internal::evaluator<Eigen::SparseMatrix<double, 0, int> >’
integration.cpp:148:25: warning:  1505 | struct evaluator<SparseMatrix<_Scalar,_Options,_StorageIndex> >
integration.cpp:148:25: warning:       |        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8:   required from ‘struct Eigen::internal::evaluator<const Eigen::SparseMatrix<double, 0, int> >’
integration.cpp:148:25: warning:   100 | struct evaluator<const T>
integration.cpp:148:25: warning:       |        ^~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCwiseBinaryOp.h:64:51:   required from ‘struct Eigen::internal::binary_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::SparseMatrix<double, 0, int>, const Eigen::Product<Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >, Eigen::SparseMatrix<double, 0, int>, 2> >, Eigen::internal::IteratorBased, Eigen::internal::IteratorBased, double, double>’
integration.cpp:148:25: warning:    64 |   typedef typename evaluator<Lhs>::InnerIterator  LhsIterator;
integration.cpp:148:25: warning:       |                                                   ^~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8:   required from ‘struct Eigen::internal::evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::SparseMatrix<double, 0, int>, const Eigen::Product<Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >, Eigen::SparseMatrix<double, 0, int>, 2> > >’
integration.cpp:148:25: warning:   722 | struct evaluator<CwiseBinaryOp<BinaryOp, Lhs, Rhs> >
integration.cpp:148:25: warning:       |        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:687:97:   required from ‘Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::SparseMatrix(const Eigen::SparseMatrixBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::SparseMatrix<double, 0, int>, const Eigen::Product<Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >, Eigen::SparseMatrix<double, 0, int>, 2> >; _Scalar = double; int _Options = 0; _StorageIndex = int]’
integration.cpp:148:25: warning:   687 |       const bool needToTranspose = (Flags & RowMajorBit) != (internal::evaluator<OtherDerived>::Flags & RowMajorBit);
integration.cpp:148:25: warning:       |                                                                                                 ^~~~~
integration.cpp:94:85:   required from here
integration.cpp:148:25: warning:    94 |   Eigen::SparseMatrix<double> corrected = expression_cells2 - weights.transpose() * integration_matrix;
integration.cpp:148:25: warning:       |                                                                                     ^~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::SparseMatrix<double, 1> >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7:   required from ‘class Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    36 | class SparseCompressedBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7:   required from ‘class Eigen::SparseMatrix<double, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    96 | class SparseMatrix
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1040:66:   required from ‘void Eigen::internal::set_from_triplets(const InputIterator&, const InputIterator&, SparseMatrixType&, DupFunctor) [with InputIterator = __gnu_cxx::__normal_iterator<Eigen::Triplet<double>*, std::vector<Eigen::Triplet<double> > >; SparseMatrixType = Eigen::SparseMatrix<double, 0, int>; DupFunctor = FindWeightsC(Rcpp::NumericVector, Eigen::MatrixXd, std::vector<std::__cxx11::basic_string<char> >, std::vector<std::__cxx11::basic_string<char> >, Eigen::MatrixXd, Eigen::VectorXd, double, double, bool)::<lambda(const double&, const double&)>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:  1040 |   SparseMatrix<Scalar,IsRowMajor?ColMajor:RowMajor,StorageIndex> trMat(mat.rows(),mat.cols());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                                  ^~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1126:103:   required from ‘void Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::setFromTriplets(const InputIterators&, const InputIterators&, DupFunctor) [with InputIterators = __gnu_cxx::__normal_iterator<Eigen::Triplet<double>*, std::vector<Eigen::Triplet<double> > >; DupFunctor = FindWeightsC(Rcpp::NumericVector, Eigen::MatrixXd, std::vector<std::__cxx11::basic_string<char> >, std::vector<std::__cxx11::basic_string<char> >, Eigen::MatrixXd, Eigen::VectorXd, double, double, bool)::<lambda(const double&, const double&)>; _Scalar = double; int _Options = 0; _StorageIndex = int]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:  1126 |   internal::set_from_triplets<InputIterators, SparseMatrix<Scalar,_Options,_StorageIndex>, DupFunctor>(begin, end, *this, dup_func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
integration.cpp:59:33:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    59 |     dist_weights.setFromTriplets(tripletList.begin(), tripletList.end(), [] (const double&, const double &b) { return b; });
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   47 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> > >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> > > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> > > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7:   required from ‘class Eigen::CwiseUnaryOpImpl<Eigen::internal::scalar_abs2_op<double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> >, Eigen::Dense>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:    94 | class CwiseUnaryOpImpl
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |       ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7:   required from ‘class Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:    55 | class CwiseUnaryOp : public CwiseUnaryOpImpl<UnaryOp, XprType, typename internal::traits<XprType>::StorageKind>, internal::no_assignment_operator
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |       ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:98:40:   required from ‘typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real Eigen::MatrixBase<Derived>::squaredNorm() const [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> >; typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real = double; typename Eigen::internal::traits<T>::Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:    98 |   return numext::real((*this).cwiseAbs2().sum());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |                       ~~~~~~~~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:110:23:   required from ‘typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real Eigen::MatrixBase<Derived>::norm() const [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> >; typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real = double; typename Eigen::internal::traits<T>::Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:   110 |   return numext::sqrt(squaredNorm());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |                       ^~~~~~~~~~~
integration.cpp:140:67:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:   140 |         double res = (query_pca.col(cell) - query_pca.col(i)).norm();
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::SparseMatrix<double, 1>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:336:80:   required from ‘struct Eigen::internal::evaluator<Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 1> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   336 |   typedef typename DenseCoeffsBase<Derived,ReadOnlyAccessors>::CoeffReturnType CoeffReturnType;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                                                ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1505:8:   required from ‘struct Eigen::internal::evaluator<Eigen::SparseMatrix<double, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:  1505 | struct evaluator<SparseMatrix<_Scalar,_Options,_StorageIndex> >
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1181:93:   required from ‘Eigen::SparseMatrix<_Scalar, _Options, _StorageIndex>& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::operator=(const Eigen::SparseMatrixBase<OtherDerived>&) [with OtherDerived = Eigen::SparseMatrix<double, 1>; _Scalar = double; int _Options = 0; _StorageIndex = int]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:  1181 |   const bool needToTranspose = (Flags & RowMajorBit) != (internal::evaluator<OtherDerived>::Flags & RowMajorBit);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                                                             ^~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1063:7:   required from ‘void Eigen::internal::set_from_triplets(const InputIterator&, const InputIterator&, SparseMatrixType&, DupFunctor) [with InputIterator = __gnu_cxx::__normal_iterator<Eigen::Triplet<double>*, std::vector<Eigen::Triplet<double> > >; SparseMatrixType = Eigen::SparseMatrix<double, 0, int>; DupFunctor = FindWeightsC(Rcpp::NumericVector, Eigen::MatrixXd, std::vector<std::__cxx11::basic_string<char> >, std::vector<std::__cxx11::basic_string<char> >, Eigen::MatrixXd, Eigen::VectorXd, double, double, bool)::<lambda(const double&, const double&)>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:  1063 |   mat = trMat;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |   ~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1126:103:   required from ‘void Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::setFromTriplets(const InputIterators&, const InputIterators&, DupFunctor) [with InputIterators = __gnu_cxx::__normal_iterator<Eigen::Triplet<double>*, std::vector<Eigen::Triplet<double> > >; DupFunctor = FindWeightsC(Rcpp::NumericVector, Eigen::MatrixXd, std::vector<std::__cxx11::basic_string<char> >, std::vector<std::__cxx11::basic_string<char> >, Eigen::MatrixXd, Eigen::VectorXd, double, double, bool)::<lambda(const double&, const double&)>; _Scalar = double; int _Options = 0; _StorageIndex = int]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:  1126 |   internal::set_from_triplets<InputIterators, SparseMatrix<Scalar,_Options,_StorageIndex>, DupFunctor>(begin, end, *this, dup_func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
integration.cpp:59:33:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    59 |     dist_weights.setFromTriplets(tripletList.begin(), tripletList.end(), [] (const double&, const double &b) { return b; });
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Matrix<double, -1, 1> >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Matrix<double, -1, 1> >, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Matrix<double, -1, 1> >, 3>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Transpose<Eigen::Matrix<double, -1, 1> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Transpose<Eigen::Matrix<double, -1, 1> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37:   required from ‘class Eigen::TransposeImpl<Eigen::Matrix<double, -1, 1>, Eigen::Dense>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   118 | template<typename MatrixType> class TransposeImpl<MatrixType,Dense>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37:   required from ‘class Eigen::Transpose<Eigen::Matrix<double, -1, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    52 | template<typename MatrixType> class Transpose
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                     ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:883:17:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, 1>; Src = Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>; Func = assign_op<double, double>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   883 |   ActualDstType actualDst(dst);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                 ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>; Derived = Eigen::Matrix<double, -1, 1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>; Derived = Eigen::Matrix<double, -1, 1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   594 |       _set_noalias(other);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   423 |       : Base(other.derived())
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                             ^
integration.cpp:43:46:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    43 |     Eigen::VectorXd dist = distances.row(cell);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                              ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:277:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8:   required from ‘struct Eigen::internal::evaluator<const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   100 | struct evaluator<const T>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |        ^~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:41:   required from ‘struct Eigen::internal::binary_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   739 |     CoeffReadCost = int(evaluator<Lhs>::CoeffReadCost) + int(evaluator<Rhs>::CoeffReadCost) + int(functor_traits<BinaryOp>::Cost),
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                         ^~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8:   required from ‘struct Eigen::internal::evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   722 | struct evaluator<CwiseBinaryOp<BinaryOp, Lhs, Rhs> >
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8:   required from ‘struct Eigen::internal::evaluator<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   100 | struct evaluator<const T>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |        ^~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:564:45:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:357:7:   required from ‘class Eigen::internal::redux_evaluator<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> > > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   357 | class redux_evaluator : public internal::evaluator<_XprType>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:414:17:   required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> > >; typename Eigen::internal::traits<T>::Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   414 |   ThisEvaluator thisEval(derived());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                 ^~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25:   required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> > >; typename Eigen::internal::traits<T>::Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   463 |   return derived().redux(Eigen::internal::scalar_sum_op<Scalar,Scalar>());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |          ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:98:46:   required from ‘typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real Eigen::MatrixBase<Derived>::squaredNorm() const [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> >; typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real = double; typename Eigen::internal::traits<T>::Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    98 |   return numext::real((*this).cwiseAbs2().sum());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                       ~~~~~~~~~~~~~~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:110:23:   required from ‘typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real Eigen::MatrixBase<Derived>::norm() const [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> >; typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real = double; typename Eigen::internal::traits<T>::Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   110 |   return numext::sqrt(squaredNorm());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                       ^~~~~~~~~~~
integration.cpp:140:67:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   140 |         double res = (query_pca.col(cell) - query_pca.col(i)).norm();
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
 1071 |     PacketAlignment = unpacket_traits<PacketScalar>::alignment,
      |                                                      ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:774:20:   required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Transpose<Eigen::Matrix<double, -1, 1> >; SrcXprType = Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>; Functor = assign_op<double, double>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   774 |   SrcEvaluatorType srcEvaluator(src);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |                    ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Transpose<Eigen::Matrix<double, -1, 1> >; SrcXprType = Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   954 |     call_dense_assignment_loop(dst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, 1>; Src = Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>; Func = assign_op<double, double>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>; Derived = Eigen::Matrix<double, -1, 1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>; Derived = Eigen::Matrix<double, -1, 1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   594 |       _set_noalias(other);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   423 |       : Base(other.derived())
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |                             ^
integration.cpp:43:46:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:    43 |     Eigen::VectorXd dist = distances.row(cell);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |                                              ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
 1071 |     PacketAlignment = unpacket_traits<PacketScalar>::alignment,
      |                                                      ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase<Derived>&) [with Derived = Eigen::CwiseUnaryOp<scalar_abs2_op<double>, const Eigen::CwiseBinaryOp<scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> > >; Eigen::Index = long int]’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:243:63:   required from ‘static Eigen::internal::redux_impl<Func, Evaluator, 3, 0>::Scalar Eigen::internal::redux_impl<Func, Evaluator, 3, 0>::run(const Evaluator&, const Func&, const XprType&) [with XprType = Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> > >; Func = Eigen::internal::scalar_sum_op<double, double>; Evaluator = Eigen::internal::redux_evaluator<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> > > >; Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   243 |     const Index alignedStart = internal::first_default_aligned(xpr);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |                                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56:   required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> > >; typename Eigen::internal::traits<T>::Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   418 |   return internal::redux_impl<Func, ThisEvaluator>::run(thisEval, func, derived());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25:   required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> > >; typename Eigen::internal::traits<T>::Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   463 |   return derived().redux(Eigen::internal::scalar_sum_op<Scalar,Scalar>());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |          ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:98:46:   required from ‘typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real Eigen::MatrixBase<Derived>::squaredNorm() const [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> >; typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real = double; typename Eigen::internal::traits<T>::Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:    98 |   return numext::real((*this).cwiseAbs2().sum());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |                       ~~~~~~~~~~~~~~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:110:23:   required from ‘typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real Eigen::MatrixBase<Derived>::norm() const [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> >; typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real = double; typename Eigen::internal::traits<T>::Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   110 |   return numext::sqrt(squaredNorm());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |                       ^~~~~~~~~~~
integration.cpp:140:67:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   140 |         double res = (query_pca.col(cell) - query_pca.col(i)).norm();
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  654 |   return internal::first_aligned<int(unpacket_traits<DefaultPacketType>::alignment),Derived>(m);
      |                                                                          ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, 2>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:   481 | class DenseCoeffsBase<Derived, DirectAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34:   required from ‘class Eigen::MapBase<Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, 0>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:    37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:       |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7:   required from ‘class Eigen::internal::BlockImpl_dense<const Eigen::Matrix<double, -1, -1>, -1, 1, true, true>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:   329 | class BlockImpl_dense<XprType,BlockRows,BlockCols, InnerPanel,true>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Transpose<Eigen::Matrix<double, -1, 1> >; SrcXprType = Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:   954 |     call_dense_assignment_loop(dst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, 1>; Src = Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, member_sum<double, double>, 0>; Func = assign_op<double, double>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:   890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:       |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>; Derived = Eigen::Matrix<double, -1, 1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:   797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>; Derived = Eigen::Matrix<double, -1, 1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:   594 |       _set_noalias(other);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:       |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:   423 |       : Base(other.derived())
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:       |                             ^
integration.cpp:77:58:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:    77 |     Eigen::VectorXd colSums = dist_weights.colwise().sum();
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning:       |                                                          ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:357:7:   required from ‘class Eigen::internal::redux_evaluator<Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   357 | class redux_evaluator : public internal::evaluator<_XprType>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:414:17:   required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>; typename Eigen::internal::traits<T>::Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   414 |   ThisEvaluator thisEval(derived());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                 ^~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25:   required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>; typename Eigen::internal::traits<T>::Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   463 |   return derived().redux(Eigen::internal::scalar_sum_op<Scalar,Scalar>());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |          ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:114:1:   required from ‘ResultType Eigen::internal::member_sum<ResultType, Scalar>::operator()(const XprType&) const [with XprType = Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>; ResultType = double; Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    97 |     { return mat.MEMBER(); }                                                                \
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |              ~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PartialReduxEvaluator.h:183:21:   required from ‘const Eigen::internal::evaluator<Eigen::PartialReduxExpr<MatrixType, MemberOp, Direction> >::Scalar Eigen::internal::evaluator<Eigen::PartialReduxExpr<MatrixType, MemberOp, Direction> >::coeff(Eigen::Index) const [with ArgType = Eigen::Matrix<double, -1, -1>; MemberOp = Eigen::internal::member_sum<double, double>; int Direction = 0; Scalar = double; Eigen::Index = long int]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   183 |     return m_functor(m_arg.template subVector<DirectionType(Direction)>(index));
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |            ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:660:61:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Transpose<Eigen::Matrix<double, -1, 1> >; SrcXprType = Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   954 |     call_dense_assignment_loop(dst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, 1>; Src = Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, member_sum<double, double>, 0>; Func = assign_op<double, double>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>; Derived = Eigen::Matrix<double, -1, 1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>; Derived = Eigen::Matrix<double, -1, 1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   594 |       _set_noalias(other);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   423 |       : Base(other.derived())
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                             ^
integration.cpp:77:58:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    77 |     Eigen::VectorXd colSums = dist_weights.colwise().sum();
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                          ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
 1071 |     PacketAlignment = unpacket_traits<PacketScalar>::alignment,
      |                                                      ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase<Derived>&) [with Derived = Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>; Eigen::Index = long int]’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:243:63:   required from ‘static Eigen::internal::redux_impl<Func, Evaluator, 3, 0>::Scalar Eigen::internal::redux_impl<Func, Evaluator, 3, 0>::run(const Evaluator&, const Func&, const XprType&) [with XprType = Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>; Func = Eigen::internal::scalar_sum_op<double, double>; Evaluator = Eigen::internal::redux_evaluator<Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >; Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   243 |     const Index alignedStart = internal::first_default_aligned(xpr);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |                                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56:   required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>; typename Eigen::internal::traits<T>::Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   418 |   return internal::redux_impl<Func, ThisEvaluator>::run(thisEval, func, derived());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25:   required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>; typename Eigen::internal::traits<T>::Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   463 |   return derived().redux(Eigen::internal::scalar_sum_op<Scalar,Scalar>());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |          ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:114:1:   required from ‘ResultType Eigen::internal::member_sum<ResultType, Scalar>::operator()(const XprType&) const [with XprType = Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>; ResultType = double; Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:    97 |     { return mat.MEMBER(); }                                                                \
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |              ~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PartialReduxEvaluator.h:183:21:   required from ‘const Eigen::internal::evaluator<Eigen::PartialReduxExpr<MatrixType, MemberOp, Direction> >::Scalar Eigen::internal::evaluator<Eigen::PartialReduxExpr<MatrixType, MemberOp, Direction> >::coeff(Eigen::Index) const [with ArgType = Eigen::Matrix<double, -1, -1>; MemberOp = Eigen::internal::member_sum<double, double>; int Direction = 0; Scalar = double; Eigen::Index = long int]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   183 |     return m_functor(m_arg.template subVector<DirectionType(Direction)>(index));
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |            ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:660:61:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Transpose<Eigen::Matrix<double, -1, 1> >; SrcXprType = Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   954 |     call_dense_assignment_loop(dst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, 1>; Src = Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, member_sum<double, double>, 0>; Func = assign_op<double, double>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>; Derived = Eigen::Matrix<double, -1, 1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>; Derived = Eigen::Matrix<double, -1, 1>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   594 |       _set_noalias(other);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:   423 |       : Base(other.derived())
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |                             ^
integration.cpp:77:58:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:    77 |     Eigen::VectorXd colSums = dist_weights.colwise().sum();
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning:       |                                                          ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  654 |   return internal::first_aligned<int(unpacket_traits<DefaultPacketType>::alignment),Derived>(m);
      |                                                                          ^~~~~~~~~
g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG  -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppEigen/include' -I'/usr/local/lib/R/library/RcppProgress/include' -I/usr/local/include    -fpic  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer    -c snn.cpp -o snn.o
In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:205,
                 from /usr/local/lib/R/library/RcppEigen/include/Eigen/Dense:1,
                 from /usr/local/lib/R/library/RcppEigen/include/RcppEigenForward.h:28,
                 from /usr/local/lib/R/library/RcppEigen/include/RcppEigen.h:25,
                 from snn.cpp:1:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
   46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i;
      |                                        ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
   47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b;
      |                                        ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes]
   49 | template<> struct is_arithmetic<__m128>  { enum { value = true }; };
      |                                       ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
   50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; };
      |                                        ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes]
   51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; };
      |                                        ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
  222 | template<> struct unpacket_traits<Packet4f> {
      |                                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
  228 | template<> struct unpacket_traits<Packet2d> {
      |                                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
 1124 | ptranspose(PacketBlock<Packet4f,4>& kernel) {
      |                                  ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
 1129 | ptranspose(PacketBlock<Packet2d,2>& kernel) {
      |                                  ^
In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:174:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
   16 |   struct conj_helper<PACKET_REAL, PACKET_CPLX, false, false> {          \
      |                                                            ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
   29 |   struct conj_helper<PACKET_CPLX, PACKET_REAL, false, false> {          \
      |                                                            ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
   16 |   struct conj_helper<PACKET_REAL, PACKET_CPLX, false, false> {          \
      |                                                            ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
   29 |   struct conj_helper<PACKET_CPLX, PACKET_REAL, false, false> {          \
      |                                                            ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:165:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<float, 4>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits<Eigen::Matrix<float, 4, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning:    22 |   typedef typename find_best_packet<_Scalar,size>::type PacketScalar;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning:       |                                                         ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49:   required from ‘struct Eigen::internal::traits<Eigen::Quaternion<float> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning:   266 |     Alignment = internal::traits<Coefficients>::Alignment,
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning:       |                                                 ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning:    24 |     ResAlignment = traits<Quaternion<float> >::Alignment
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning:       |                                              ^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
  208 |   typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
      |                                                                                        ^~~~
In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:271:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:   302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 3>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:   555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<float, 4, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<float, 4, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<float, 4, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<float, 4, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:   178 | class Matrix
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50:   required from ‘class Eigen::QuaternionBase<Eigen::Quaternion<float> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    46 |   typedef typename Coefficients::CoeffReturnType CoeffReturnType;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |                                                  ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7:   required from ‘class Eigen::Quaternion<float>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:   273 | class Quaternion : public QuaternionBase<Quaternion<_Scalar,_Options> >
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    27 |   {
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |   ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 4>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 4, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    22 |   typedef typename find_best_packet<_Scalar,size>::type PacketScalar;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                         ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49:   required from ‘struct Eigen::internal::traits<Eigen::Quaternion<double> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   266 |     Alignment = internal::traits<Coefficients>::Alignment,
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                 ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    98 |     ResAlignment = traits<Quaternion<double> >::Alignment
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                               ^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  208 |   typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
      |                                                                                        ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:   302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 3>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:   555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<double, 4, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, 4, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, 4, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<double, 4, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:   178 | class Matrix
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50:   required from ‘class Eigen::QuaternionBase<Eigen::Quaternion<double> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    46 |   typedef typename Coefficients::CoeffReturnType CoeffReturnType;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |                                                  ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7:   required from ‘class Eigen::Quaternion<double>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:   273 | class Quaternion : public QuaternionBase<Quaternion<_Scalar,_Options> >
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:   102 |   {
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |   ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/SparseCore:37,
                 from /usr/local/lib/R/library/RcppEigen/include/Eigen/Sparse:26,
                 from /usr/local/lib/R/library/RcppEigen/include/RcppEigenForward.h:29:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::SparseMatrix<double, 0, int> >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7:   required from ‘class Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 0, int> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    36 | class SparseCompressedBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7:   required from ‘class Eigen::SparseMatrix<double, 0, int>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    96 | class SparseMatrix
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    61 |   typedef Triplet<double> T;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                         ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   47 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, -1>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, -1, -1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:    22 |   typedef typename find_best_packet<_Scalar,size>::type PacketScalar;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |                                                         ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, -1, -1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:    98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |       ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<double, -1, -1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:   178 | class Matrix
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |       ^~~~~~
snn.cpp:16:79:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:    16 | Eigen::SparseMatrix<double> ComputeSNN(Eigen::MatrixXd nn_ranked, double prune) {
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |                                                                               ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  208 |   typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
      |                                                                                        ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1>, 1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:   302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1>, 3>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:   555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<double, -1, -1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, -1, -1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, -1, -1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<double, -1, -1>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:   178 | class Matrix
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |       ^~~~~~
snn.cpp:16:79:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:    16 | Eigen::SparseMatrix<double> ComputeSNN(Eigen::MatrixXd nn_ranked, double prune) {
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning:       |                                                                               ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> > >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7:   required from ‘class Eigen::SparseCompressedBase<Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    36 | class SparseCompressedBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseTranspose.h:22:9:   required from ‘class Eigen::internal::SparseTransposeImpl<Eigen::SparseMatrix<double, 0, int>, 1024>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    22 |   class SparseTransposeImpl<MatrixType,CompressedAccessBit>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseTranspose.h:45:37:   required from ‘class Eigen::TransposeImpl<Eigen::SparseMatrix<double, 0, int>, Eigen::Sparse>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    45 | template<typename MatrixType> class TransposeImpl<MatrixType,Sparse>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37:   required from ‘class Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    52 | template<typename MatrixType> class Transpose
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                     ^~~~~~~~~
snn.cpp:27:29:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    27 |   SNN = SNN * (SNN.transpose());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                ~~~~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   47 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::Product<Eigen::SparseMatrix<double, 0, int>, Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >, 2> >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:145:7:   required from ‘class Eigen::ProductImpl<Eigen::SparseMatrix<double, 0, int>, Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >, 2, Eigen::Sparse>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:   145 | class ProductImpl : public internal::generic_xpr_base<Product<Lhs,Rhs,Option>, MatrixXpr, StorageKind>::type
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |       ^~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7:   required from ‘class Eigen::Product<Eigen::SparseMatrix<double, 0, int>, Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >, 2>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:    71 | class Product : public ProductImpl<_Lhs,_Rhs,Option,
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |       ^~~~~~~
snn.cpp:27:31:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:    27 |   SNN = SNN * (SNN.transpose());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |                               ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   47 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
snn.cpp: In function ‘std::vector<double> SNN_SmallestNonzero_Dist(Eigen::SparseMatrix<double, 0, int>, Eigen::MatrixXd, int, std::vector<double>)’:
snn.cpp:99:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<long unsigned int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   99 |     if (n_i > nonzero_order.size()) n_i = nonzero_order.size();
      |         ~~~~^~~~~~~~~~~~~~~~~~~~~~
snn.cpp:101:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<long unsigned int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  101 |     for (int j = 0; j < nonzero_order.size(); ++j) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~
snn.cpp:105:23: warning: comparison of integer expressions of different signedness: ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  105 |       if(dists.size() < n_i  || nonzero[nonzero_order[j]] == nonzero[nonzero_order[n_i-1]]) {
      |          ~~~~~~~~~~~~~^~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 1>’
snn.cpp:105:23: warning:   302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
snn.cpp:105:23: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 3>’
snn.cpp:105:23: warning:   555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
snn.cpp:105:23: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >’
snn.cpp:105:23: warning:    41 | template<typename Derived> class DenseBase
snn.cpp:105:23: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >’
snn.cpp:105:23: warning:    48 | template<typename Derived> class MatrixBase
snn.cpp:105:23: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34:   required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 0>’
snn.cpp:105:23: warning:    37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors>
snn.cpp:105:23: warning:       |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34:   required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 1>’
snn.cpp:105:23: warning:   223 | template<typename Derived> class MapBase<Derived, WriteAccessors>
snn.cpp:105:23: warning:       |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7:   required from ‘class Eigen::internal::BlockImpl_dense<Eigen::Matrix<double, -1, -1>, 1, -1, false, true>’
snn.cpp:105:23: warning:   329 | class BlockImpl_dense<XprType,BlockRows,BlockCols, InnerPanel,true>
snn.cpp:105:23: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7:   required from ‘class Eigen::BlockImpl<Eigen::Matrix<double, -1, -1>, 1, -1, false, Eigen::Dense>’
snn.cpp:105:23: warning:   154 | class BlockImpl<XprType, BlockRows, BlockCols, InnerPanel, Dense>
snn.cpp:105:23: warning:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81:   required from ‘class Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>’
snn.cpp:105:23: warning:   103 | template<typename XprType, int BlockRows, int BlockCols, bool InnerPanel> class Block
snn.cpp:105:23: warning:       |                                                                                 ^~~~~
snn.cpp:106:30:   required from here
snn.cpp:105:23: warning:   106 |         double res = (mat.row(cell) - mat.row(i)).norm();
snn.cpp:105:23: warning:       |                       ~~~~~~~^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, Eigen::Dense>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   148 | class CwiseBinaryOpImpl
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    77 | class CwiseBinaryOp :
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~
snn.cpp:106:48:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   106 |         double res = (mat.row(cell) - mat.row(i)).norm();
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
snn.cpp:117:22: warning: comparison of integer expressions of different signedness: ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  117 |     if (dists.size() > n_i) {
      |         ~~~~~~~~~~~~~^~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::SparseMatrix<double, 1> >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7:   required from ‘class Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 1> >’
snn.cpp:117:22: warning:    36 | class SparseCompressedBase
snn.cpp:117:22: warning:       |       ^~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7:   required from ‘class Eigen::SparseMatrix<double, 1>’
snn.cpp:117:22: warning:    96 | class SparseMatrix
snn.cpp:117:22: warning:       |       ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1040:66:   required from ‘void Eigen::internal::set_from_triplets(const InputIterator&, const InputIterator&, SparseMatrixType&, DupFunctor) [with InputIterator = __gnu_cxx::__normal_iterator<Eigen::Triplet<double>*, std::vector<Eigen::Triplet<double> > >; SparseMatrixType = Eigen::SparseMatrix<double, 0, int>; DupFunctor = scalar_sum_op<double, double>]’
snn.cpp:117:22: warning:  1040 |   SparseMatrix<Scalar,IsRowMajor?ColMajor:RowMajor,StorageIndex> trMat(mat.rows(),mat.cols());
snn.cpp:117:22: warning:       |                                                                  ^~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1110:92:   required from ‘void Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::setFromTriplets(const InputIterators&, const InputIterators&) [with InputIterators = __gnu_cxx::__normal_iterator<Eigen::Triplet<double>*, std::vector<Eigen::Triplet<double> > >; _Scalar = double; int _Options = 0; _StorageIndex = int]’
snn.cpp:117:22: warning:  1110 |   internal::set_from_triplets<InputIterators, SparseMatrix<Scalar,_Options,_StorageIndex> >(begin, end, *this, internal::scalar_sum_op<Scalar,Scalar>());
snn.cpp:117:22: warning:       |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
snn.cpp:26:22:   required from here
snn.cpp:117:22: warning:    26 |   SNN.setFromTriplets(tripletList.begin(), tripletList.end());
snn.cpp:117:22: warning:       |   ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   47 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> > >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> > > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:    41 | template<typename Derived> class DenseBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> > > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:    48 | template<typename Derived> class MatrixBase
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7:   required from ‘class Eigen::CwiseUnaryOpImpl<Eigen::internal::scalar_abs2_op<double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >, Eigen::Dense>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:    94 | class CwiseUnaryOpImpl
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |       ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7:   required from ‘class Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:    55 | class CwiseUnaryOp : public CwiseUnaryOpImpl<UnaryOp, XprType, typename internal::traits<XprType>::StorageKind>, internal::no_assignment_operator
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |       ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:98:40:   required from ‘typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real Eigen::MatrixBase<Derived>::squaredNorm() const [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >; typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real = double; typename Eigen::internal::traits<T>::Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:    98 |   return numext::real((*this).cwiseAbs2().sum());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |                       ~~~~~~~~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:110:23:   required from ‘typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real Eigen::MatrixBase<Derived>::norm() const [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >; typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real = double; typename Eigen::internal::traits<T>::Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:   110 |   return numext::sqrt(squaredNorm());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |                       ^~~~~~~~~~~
snn.cpp:106:55:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:   106 |         double res = (mat.row(cell) - mat.row(i)).norm();
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning:       |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::SparseMatrix<double, 1>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:336:80:   required from ‘struct Eigen::internal::evaluator<Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 1> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   336 |   typedef typename DenseCoeffsBase<Derived,ReadOnlyAccessors>::CoeffReturnType CoeffReturnType;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                                                ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1505:8:   required from ‘struct Eigen::internal::evaluator<Eigen::SparseMatrix<double, 1> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:  1505 | struct evaluator<SparseMatrix<_Scalar,_Options,_StorageIndex> >
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1181:93:   required from ‘Eigen::SparseMatrix<_Scalar, _Options, _StorageIndex>& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::operator=(const Eigen::SparseMatrixBase<OtherDerived>&) [with OtherDerived = Eigen::SparseMatrix<double, 1>; _Scalar = double; int _Options = 0; _StorageIndex = int]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:  1181 |   const bool needToTranspose = (Flags & RowMajorBit) != (internal::evaluator<OtherDerived>::Flags & RowMajorBit);
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                                                             ^~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1063:7:   required from ‘void Eigen::internal::set_from_triplets(const InputIterator&, const InputIterator&, SparseMatrixType&, DupFunctor) [with InputIterator = __gnu_cxx::__normal_iterator<Eigen::Triplet<double>*, std::vector<Eigen::Triplet<double> > >; SparseMatrixType = Eigen::SparseMatrix<double, 0, int>; DupFunctor = scalar_sum_op<double, double>]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:  1063 |   mat = trMat;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |   ~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1110:92:   required from ‘void Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::setFromTriplets(const InputIterators&, const InputIterators&) [with InputIterators = __gnu_cxx::__normal_iterator<Eigen::Triplet<double>*, std::vector<Eigen::Triplet<double> > >; _Scalar = double; int _Options = 0; _StorageIndex = int]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:  1110 |   internal::set_from_triplets<InputIterators, SparseMatrix<Scalar,_Options,_StorageIndex> >(begin, end, *this, internal::scalar_sum_op<Scalar,Scalar>());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
snn.cpp:26:22:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    26 |   SNN.setFromTriplets(tripletList.begin(), tripletList.end());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |   ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::SparseMatrix<double, 0, int>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:336:80:   required from ‘struct Eigen::internal::evaluator<Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 0, int> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   336 |   typedef typename DenseCoeffsBase<Derived,ReadOnlyAccessors>::CoeffReturnType CoeffReturnType;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                                                ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1505:8:   required from ‘struct Eigen::internal::evaluator<Eigen::SparseMatrix<double, 0, int> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:  1505 | struct evaluator<SparseMatrix<_Scalar,_Options,_StorageIndex> >
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseUtil.h:121:8:   required from ‘struct Eigen::internal::plain_object_eval<Eigen::SparseMatrix<double, 0, int>, Eigen::Sparse>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   121 | struct plain_object_eval<T,Sparse>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |        ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseProduct.h:71:53:   required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::SparseShape, Eigen::SparseShape, ProductType>::evalTo(Dest&, const Lhs&, const Rhs&, Eigen::SparseShape) [with Dest = Eigen::SparseMatrix<double, 0, int>; Lhs = Eigen::SparseMatrix<double, 0, int>; Rhs = Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >; int ProductType = 8]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    71 |     typedef typename nested_eval<Lhs,Dynamic>::type LhsNested;
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                                     ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseProduct.h:43:11:   required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::SparseShape, Eigen::SparseShape, ProductType>::evalTo(Dest&, const Lhs&, const Rhs&) [with Dest = Eigen::SparseMatrix<double, 0, int>; Lhs = Eigen::SparseMatrix<double, 0, int>; Rhs = Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >; int ProductType = 8]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    43 |     evalTo(dst, lhs, rhs, typename evaluator_traits<Dest>::Shape());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseProduct.h:174:51:   required from ‘Eigen::SparseMatrix<_Scalar, _Options, _StorageIndex>& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::operator=(const Eigen::Product<Lhs, Rhs, 2>&) [with Lhs = Eigen::SparseMatrix<double, 0, int>; Rhs = Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >; _Scalar = double; int _Options = 0; _StorageIndex = int]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   174 |   internal::generic_product_impl<Lhs, Rhs>::evalTo(dst,src.lhs(),src.rhs());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
snn.cpp:27:31:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    27 |   SNN = SNN * (SNN.transpose());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                               ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:277:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8:   required from ‘struct Eigen::internal::evaluator<const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   100 | struct evaluator<const T>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |        ^~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:41:   required from ‘struct Eigen::internal::binary_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   739 |     CoeffReadCost = int(evaluator<Lhs>::CoeffReadCost) + int(evaluator<Rhs>::CoeffReadCost) + int(functor_traits<BinaryOp>::Cost),
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                                         ^~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8:   required from ‘struct Eigen::internal::evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   722 | struct evaluator<CwiseBinaryOp<BinaryOp, Lhs, Rhs> >
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8:   required from ‘struct Eigen::internal::evaluator<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   100 | struct evaluator<const T>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |        ^~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:564:45:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:357:7:   required from ‘class Eigen::internal::redux_evaluator<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> > > >’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   357 | class redux_evaluator : public internal::evaluator<_XprType>
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |       ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:414:17:   required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> > >; typename Eigen::internal::traits<T>::Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   414 |   ThisEvaluator thisEval(derived());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                 ^~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25:   required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> > >; typename Eigen::internal::traits<T>::Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   463 |   return derived().redux(Eigen::internal::scalar_sum_op<Scalar,Scalar>());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |          ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:98:46:   required from ‘typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real Eigen::MatrixBase<Derived>::squaredNorm() const [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >; typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real = double; typename Eigen::internal::traits<T>::Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:    98 |   return numext::real((*this).cwiseAbs2().sum());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                       ~~~~~~~~~~~~~~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:110:23:   required from ‘typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real Eigen::MatrixBase<Derived>::norm() const [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >; typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real = double; typename Eigen::internal::traits<T>::Scalar = double]’
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   110 |   return numext::sqrt(squaredNorm());
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                       ^~~~~~~~~~~
snn.cpp:106:55:   required from here
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:   106 |         double res = (mat.row(cell) - mat.row(i)).norm();
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning:       |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
 1071 |     PacketAlignment = unpacket_traits<PacketScalar>::alignment,
      |                                                      ^~~~~~~~~
g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG  -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppEigen/include' -I'/usr/local/lib/R/library/RcppProgress/include' -I/usr/local/include    -fpic  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer    -c stats.cpp -o stats.o
gcc -I"/usr/include/R" -DNDEBUG  -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppEigen/include' -I'/usr/local/lib/R/library/RcppProgress/include' -I/usr/local/include    -fpic  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer   -c valid_pointer.c -o valid_pointer.o
g++ -std=gnu++17 -shared -L/usr/lib64/R/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o Seurat.so ModularityOptimizer.o RModularityOptimizer.o RcppExports.o data_manipulation.o fast_NN_dist.o integration.o snn.o stats.o valid_pointer.o -L/usr/lib64/R/lib -lR
installing to /builddir/build/BUILDROOT/R-CRAN-Seurat-5.1.0-1.fc40.copr7435327.x86_64/usr/local/lib/R/library/00LOCK-Seurat/00new/Seurat/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘Seurat’
    finding HTML links ... done
    AddAzimuthResults                       html  
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    finding level-2 HTML links ... done

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** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (Seurat)
+ test -d Seurat/src
+ cd Seurat/src
+ rm -f ModularityOptimizer.o RModularityOptimizer.o RcppExports.o data_manipulation.o fast_NN_dist.o integration.o snn.o stats.o valid_pointer.o Seurat.so
+ rm -f /builddir/build/BUILDROOT/R-CRAN-Seurat-5.1.0-1.fc40.copr7435327.x86_64/usr/local/lib/R/library/R.css
+ find /builddir/build/BUILDROOT/R-CRAN-Seurat-5.1.0-1.fc40.copr7435327.x86_64/usr/local/lib/R/library -type f -exec sed -i s@/builddir/build/BUILDROOT/R-CRAN-Seurat-5.1.0-1.fc40.copr7435327.x86_64@@g '{}' ';'
+ /usr/bin/find-debuginfo -j2 --strict-build-id -m -i --build-id-seed 5.1.0-1.fc40.copr7435327 --unique-debug-suffix -5.1.0-1.fc40.copr7435327.x86_64 --unique-debug-src-base R-CRAN-Seurat-5.1.0-1.fc40.copr7435327.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/Seurat
find-debuginfo: starting
Extracting debug info from 1 files
DWARF-compressing 1 files
sepdebugcrcfix: Updated 1 CRC32s, 0 CRC32s did match.
Creating .debug symlinks for symlinks to ELF files
Copying sources found by 'debugedit -l' to /usr/src/debug/R-CRAN-Seurat-5.1.0-1.fc40.copr7435327.x86_64
201 blocks
find-debuginfo: done
+ /usr/lib/rpm/check-buildroot
+ /usr/lib/rpm/redhat/brp-ldconfig
+ /usr/lib/rpm/brp-compress
+ /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip
+ /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip
+ /usr/lib/rpm/redhat/brp-mangle-shebangs
+ /usr/lib/rpm/brp-remove-la-files
+ env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j2
+ /usr/lib/rpm/redhat/brp-python-hardlink
Processing files: R-CRAN-Seurat-5.1.0-1.fc40.copr7435327.x86_64
Provides: R-CRAN-Seurat = 5.1.0-1.fc40.copr7435327 R-CRAN-Seurat(x86-64) = 5.1.0-1.fc40.copr7435327
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: libR.so()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.11)(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libm.so.6(GLIBC_2.38)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.15)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.19)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) rtld(GNU_HASH)
Processing files: R-CRAN-Seurat-debugsource-5.1.0-1.fc40.copr7435327.x86_64
Provides: R-CRAN-Seurat-debugsource = 5.1.0-1.fc40.copr7435327 R-CRAN-Seurat-debugsource(x86-64) = 5.1.0-1.fc40.copr7435327
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: R-CRAN-Seurat-debuginfo-5.1.0-1.fc40.copr7435327.x86_64
Provides: R-CRAN-Seurat-debuginfo = 5.1.0-1.fc40.copr7435327 R-CRAN-Seurat-debuginfo(x86-64) = 5.1.0-1.fc40.copr7435327 debuginfo(build-id) = 66fd8f694530abbaeb1b16e49f289efd7ac30073
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: R-CRAN-Seurat-debugsource(x86-64) = 5.1.0-1.fc40.copr7435327
Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/R-CRAN-Seurat-5.1.0-1.fc40.copr7435327.x86_64
Wrote: /builddir/build/RPMS/R-CRAN-Seurat-5.1.0-1.fc40.copr7435327.x86_64.rpm
Wrote: /builddir/build/RPMS/R-CRAN-Seurat-debugsource-5.1.0-1.fc40.copr7435327.x86_64.rpm
Wrote: /builddir/build/RPMS/R-CRAN-Seurat-debuginfo-5.1.0-1.fc40.copr7435327.x86_64.rpm
Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.yuHW1a
+ umask 022
+ cd /builddir/build/BUILD
+ cd Seurat
+ /usr/bin/rm -rf /builddir/build/BUILDROOT/R-CRAN-Seurat-5.1.0-1.fc40.copr7435327.x86_64
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.o55YpX
+ umask 022
+ cd /builddir/build/BUILD
+ rm -rf /builddir/build/BUILD/Seurat-SPECPARTS
+ rm -rf Seurat Seurat.gemspec
+ RPM_EC=0
++ jobs -p
+ exit 0

RPM build warnings:
    source_date_epoch_from_changelog set but %changelog is missing
Finish: rpmbuild R-CRAN-Seurat-5.1.0-1.fc40.copr7435327.src.rpm
Finish: build phase for R-CRAN-Seurat-5.1.0-1.fc40.copr7435327.src.rpm
INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan
INFO: /var/lib/mock/fedora-40-x86_64-1715391297.000742/root/var/log/dnf5.log
INFO: Done(/var/lib/copr-rpmbuild/results/R-CRAN-Seurat-5.1.0-1.fc40.copr7435327.src.rpm) Config(child) 2 minutes 8 seconds
INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results
INFO: Cleaning up build root ('cleanup_on_success=True')
Start: clean chroot
INFO: unmounting tmpfs.
Finish: clean chroot
Finish: run
Running RPMResults tool
Package info:
{
    "packages": [
        {
            "name": "R-CRAN-Seurat-debugsource",
            "epoch": null,
            "version": "5.1.0",
            "release": "1.fc40.copr7435327",
            "arch": "x86_64"
        },
        {
            "name": "R-CRAN-Seurat",
            "epoch": null,
            "version": "5.1.0",
            "release": "1.fc40.copr7435327",
            "arch": "src"
        },
        {
            "name": "R-CRAN-Seurat-debuginfo",
            "epoch": null,
            "version": "5.1.0",
            "release": "1.fc40.copr7435327",
            "arch": "x86_64"
        },
        {
            "name": "R-CRAN-Seurat",
            "epoch": null,
            "version": "5.1.0",
            "release": "1.fc40.copr7435327",
            "arch": "x86_64"
        }
    ]
}
RPMResults finished