%global __brp_check_rpaths %{nil}
%global __requires_exclude ^libmpi
%global packname  WhiteStripe
%global packver   2.4.3
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          2.4.3
Release:          1%{?dist}%{?buildtag}
Summary:          White Matter Normalization for Magnetic Resonance Images

License:          GPL-3
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel >= 2.10
Requires:         R-core >= 2.10
BuildArch:        noarch
BuildRequires:    R-CRAN-oro.nifti >= 0.5.0
BuildRequires:    R-methods 
BuildRequires:    R-graphics 
BuildRequires:    R-stats 
BuildRequires:    R-utils 
BuildRequires:    R-CRAN-mgcv 
BuildRequires:    R-CRAN-neurobase 
Requires:         R-CRAN-oro.nifti >= 0.5.0
Requires:         R-methods 
Requires:         R-graphics 
Requires:         R-stats 
Requires:         R-utils 
Requires:         R-CRAN-mgcv 
Requires:         R-CRAN-neurobase 

%description
Shinohara (2014) <doi:10.1016/j.nicl.2014.08.008> introduced
'WhiteStripe', an intensity-based normalization of T1 and T2 images, where
normal appearing white matter performs well, but requires segmentation.
This method performs white matter mean and standard deviation estimates on
data that has been rigidly-registered to the 'MNI' template and uses
histogram-based methods.

%prep
%setup -q -c -n %{packname}

# fix end of executable files
find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
# prevent binary stripping
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
[ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \
  sed -i 's@-g0@@g' {} \; || true
# don't allow local prefix in executable scripts
find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;

%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
# remove buildroot from installed files
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;

%files
%{rlibdir}/%{packname}