scdeco.pg.noxc {scDECO} | R Documentation |
ZENCO fitting function when no secondary covariate is provided
Description
ZENCO fitting function when no secondary covariate is provided
Usage
scdeco.pg.noxc(
dat,
b0,
b1,
adapt_iter = 10000,
update_iter = 5000,
coda_iter = 50000,
coda_thin = 20,
coda_burnin = 10000
)
Arguments
dat |
matrix containing expression values as first two columns and covariate as third column |
b0 |
intercept of zinf parameter |
b1 |
slope of zinf parameter |
adapt_iter |
number of adaptation iterations in the jags.model function |
update_iter |
update iterations in the update function |
coda_iter |
number of iterations for the coda.sample function |
coda_thin |
how much to thin the resulting MCMC output |
coda_burnin |
how many iterations to burn before beginning coda sample collection |
Value
MCMC samples that have been adapted, burned, and thinned
[Package scDECO version 0.1.0 Index]