%global __brp_check_rpaths %{nil}
%global __requires_exclude ^libmpi
%global packname  qrNLMM
%global packver   3.4
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          3.4
Release:          1%{?dist}%{?buildtag}
Summary:          Quantile Regression for Nonlinear Mixed-Effects Models

License:          GPL (>= 2)
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel
Requires:         R-core
BuildArch:        noarch
BuildRequires:    R-CRAN-mvtnorm 
BuildRequires:    R-CRAN-lqr 
BuildRequires:    R-CRAN-quantreg 
BuildRequires:    R-CRAN-psych 
BuildRequires:    R-CRAN-ald 
BuildRequires:    R-CRAN-progress 
Requires:         R-CRAN-mvtnorm 
Requires:         R-CRAN-lqr 
Requires:         R-CRAN-quantreg 
Requires:         R-CRAN-psych 
Requires:         R-CRAN-ald 
Requires:         R-CRAN-progress 

%description
Quantile regression (QR) for Nonlinear Mixed-Effects Models via the
asymmetric Laplace distribution (ALD). It uses the Stochastic
Approximation of the EM (SAEM) algorithm for deriving exact maximum
likelihood estimates and full inference results for the fixed-effects and
variance components. It also provides prediction and graphical summaries
for assessing the algorithm convergence and fitting results.

%prep
%setup -q -c -n %{packname}

# fix end of executable files
find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
# prevent binary stripping
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
[ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \
  sed -i 's@-g0@@g' {} \; || true
# don't allow local prefix in executable scripts
find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;

%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
# remove buildroot from installed files
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;

%files
%{rlibdir}/%{packname}