supercell_plot_tSNE {SuperCell} | R Documentation |
Plot super-cell tSNE (Use supercell_DimPlot instead) Plots super-cell tSNE (result of supercell_tSNE)
Description
Plot super-cell tSNE (Use supercell_DimPlot instead) Plots super-cell tSNE (result of supercell_tSNE)
Usage
supercell_plot_tSNE(
SC,
groups,
tSNE_name = "SC_tSNE",
color.use = NULL,
asp = 1,
alpha = 0.7,
title = NULL
)
Arguments
SC |
super-cell structure (output of SCimplify) with a field |
groups |
coloring metacells by groups |
tSNE_name |
the mane of the field containing tSNE result |
color.use |
colors of groups |
asp |
plot aspect ratio |
alpha |
transparency of |
title |
title of the plot |
Value
[Package SuperCell version 1.0 Index]