Fujita2023 {parafac4microbiome} | R Documentation |
Fujita2023 longitudinal microbiome data
Description
The Fujita2023 longitudinal microbiome dataset as a three-dimensional array, with replicates in mode 1, microbial abundances in mode 2 and time in mode 3.
Usage
Fujita2023
Format
Fujita2023
A list object with three elements:
- data
Array object of the data cube
- mode1
Dataframe with all the subject metadata, ordered the same as the rows in the data cube.
- mode2
Taxonomic classification of the microbiota, ordered the same as the columns in the data cube.
- mode3
Dataframe with the time metadata, ordered the same as the third dimension in the array.
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Source
doi:10.1186/s40168-023-01474-5
[Package parafac4microbiome version 1.0.3 Index]