multiwayCLR {parafac4microbiome}R Documentation

Perform a centered log-ratio transform over a multi-way array

Description

Note: Propagates NAs corresponding to missing samples.

Usage

multiwayCLR(X, pseudocount = 1)

Arguments

X

Multi-way array of counts

pseudocount

Pseudocount value to use (default 1).

Value

CLRed cube

Examples

cubeCLR = multiwayCLR(Fujita2023$data)

[Package parafac4microbiome version 1.0.3 Index]