Warning: Permanently added '2620:52:3:1:dead:beef:cafe:c119' (ED25519) to the list of known hosts. Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-crnqoomp/R-CRAN-fdarep/R-CRAN-fdarep.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-crnqoomp/R-CRAN-fdarep --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1727861822.563446 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 5.6 starting (python version = 3.12.1, NVR = mock-5.6-1.fc39), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-crnqoomp/R-CRAN-fdarep/R-CRAN-fdarep.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-crnqoomp/R-CRAN-fdarep --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1727861822.563446 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-crnqoomp/R-CRAN-fdarep/R-CRAN-fdarep.spec) Config(fedora-40-x86_64) Start: clean chroot Finish: clean chroot Mock Version: 5.6 INFO: Mock Version: 5.6 Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-40-x86_64-1727861822.563446/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf5 detected and used (fallback) INFO: Buildroot is handled by package management from host and used with --installroot: rpm-4.19.1.1-1.fc39.x86_64 rpm-sequoia-1.6.0-1.fc39.x86_64 python3-dnf-4.21.1-1.fc39.noarch python3-dnf-plugins-core-4.9.0-1.fc39.noarch yum-4.21.1-1.fc39.noarch dnf5-5.1.17-2.fc39.x86_64 dnf5-plugins-5.1.17-2.fc39.x86_64 Start: installing minimal buildroot with dnf5 Updating and loading repositories: updates 100% | 22.1 MiB/s | 11.7 MiB | 00m01s fedora 100% | 15.1 MiB/s | 20.8 MiB | 00m01s Copr repository 100% | 33.2 MiB/s | 12.5 MiB | 00m00s Repositories loaded. Package Arch Version Repository Size Installing group/module packages: bash x86_64 5.2.26-3.fc40 fedora 8.1 MiB bzip2 x86_64 1.0.8-18.fc40 fedora 91.7 KiB coreutils x86_64 9.4-8.fc40 updates 5.8 MiB cpio x86_64 2.15-1.fc40 fedora 1.1 MiB diffutils x86_64 3.10-5.fc40 fedora 1.6 MiB fedora-release-common noarch 40-39 updates 19.1 KiB findutils x86_64 1:4.9.0-9.fc40 updates 1.5 MiB gawk x86_64 5.3.0-3.fc40 fedora 1.7 MiB glibc-minimal-langpack x86_64 2.39-22.fc40 updates 0.0 B grep x86_64 3.11-7.fc40 fedora 1.0 MiB gzip x86_64 1.13-1.fc40 fedora 385.0 KiB info x86_64 7.1-2.fc40 fedora 357.8 KiB patch x86_64 2.7.6-24.fc40 fedora 262.8 KiB redhat-rpm-config noarch 288-1.fc40 updates 185.2 KiB rpm-build x86_64 4.19.1.1-1.fc40 fedora 173.7 KiB sed x86_64 4.9-1.fc40 fedora 861.5 KiB shadow-utils x86_64 2:4.15.1-3.fc40 updates 4.1 MiB tar x86_64 2:1.35-3.fc40 fedora 2.9 MiB unzip x86_64 6.0-63.fc40 fedora 382.8 KiB util-linux x86_64 2.40.1-1.fc40 updates 3.7 MiB which x86_64 2.21-41.fc40 fedora 80.2 KiB xz x86_64 1:5.4.6-3.fc40 fedora 2.0 MiB Installing dependencies: alternatives x86_64 1.27-1.fc40 updates 66.3 KiB ansible-srpm-macros noarch 1-14.fc40 fedora 35.7 KiB audit-libs x86_64 4.0.2-1.fc40 updates 327.4 KiB authselect x86_64 1.5.0-5.fc40 fedora 153.6 KiB authselect-libs x86_64 1.5.0-5.fc40 fedora 818.3 KiB basesystem noarch 11-20.fc40 fedora 0.0 B binutils x86_64 2.41-37.fc40 updates 26.4 MiB binutils-gold x86_64 2.41-37.fc40 updates 2.0 MiB bzip2-libs x86_64 1.0.8-18.fc40 fedora 80.7 KiB ca-certificates noarch 2024.2.69_v8.0.401-1.0.fc40 updates 2.4 MiB coreutils-common x86_64 9.4-8.fc40 updates 11.4 MiB cracklib x86_64 2.9.11-5.fc40 fedora 238.9 KiB crypto-policies noarch 20240725-1.git28d3e2d.fc40 updates 153.3 KiB curl x86_64 8.6.0-10.fc40 updates 738.6 KiB cyrus-sasl-lib x86_64 2.1.28-19.fc40 fedora 2.3 MiB debugedit x86_64 5.0-14.fc40 fedora 199.0 KiB dwz x86_64 0.15-6.fc40 fedora 290.9 KiB ed x86_64 1.20.2-1.fc40 updates 146.9 KiB efi-srpm-macros noarch 5-11.fc40 fedora 40.1 KiB elfutils x86_64 0.191-4.fc40 fedora 2.5 MiB elfutils-debuginfod-client x86_64 0.191-4.fc40 fedora 64.9 KiB elfutils-default-yama-scope noarch 0.191-4.fc40 fedora 1.8 KiB elfutils-libelf x86_64 0.191-4.fc40 fedora 1.2 MiB elfutils-libs x86_64 0.191-4.fc40 fedora 646.1 KiB fedora-gpg-keys noarch 40-2 updates 124.7 KiB fedora-release noarch 40-39 updates 0.0 B fedora-release-identity-basic noarch 40-39 updates 654.0 B fedora-repos noarch 40-2 updates 4.9 KiB file x86_64 5.45-4.fc40 fedora 103.5 KiB file-libs x86_64 5.45-4.fc40 fedora 9.9 MiB filesystem x86_64 3.18-8.fc40 fedora 106.0 B fonts-srpm-macros noarch 1:2.0.5-14.fc40 fedora 55.3 KiB forge-srpm-macros noarch 0.3.2-1.fc40 updates 39.0 KiB fpc-srpm-macros noarch 1.3-12.fc40 fedora 144.0 B gdb-minimal x86_64 15.1-1.fc40 updates 13.0 MiB gdbm x86_64 1:1.23-6.fc40 fedora 460.9 KiB gdbm-libs x86_64 1:1.23-6.fc40 fedora 121.9 KiB ghc-srpm-macros noarch 1.9-1.fc40 fedora 716.0 B glibc x86_64 2.39-22.fc40 updates 6.6 MiB glibc-common x86_64 2.39-22.fc40 updates 1.0 MiB glibc-gconv-extra x86_64 2.39-22.fc40 updates 7.8 MiB gmp x86_64 1:6.2.1-8.fc40 fedora 794.6 KiB gnat-srpm-macros noarch 6-5.fc40 fedora 1.0 KiB go-srpm-macros noarch 3.5.0-1.fc40 fedora 60.6 KiB jansson x86_64 2.13.1-9.fc40 fedora 88.3 KiB kernel-srpm-macros noarch 1.0-23.fc40 fedora 1.9 KiB keyutils-libs x86_64 1.6.3-3.fc40 fedora 54.4 KiB krb5-libs x86_64 1.21.3-1.fc40 updates 2.3 MiB libacl x86_64 2.3.2-1.fc40 fedora 40.0 KiB libarchive x86_64 3.7.2-4.fc40 updates 914.6 KiB libattr x86_64 2.5.2-3.fc40 fedora 28.5 KiB libblkid x86_64 2.40.1-1.fc40 updates 258.5 KiB libbrotli x86_64 1.1.0-3.fc40 fedora 829.5 KiB libcap x86_64 2.69-8.fc40 updates 219.8 KiB libcap-ng x86_64 0.8.4-4.fc40 fedora 73.1 KiB libcom_err x86_64 1.47.0-5.fc40 fedora 67.2 KiB libcurl x86_64 8.6.0-10.fc40 updates 776.8 KiB libeconf x86_64 0.6.2-2.fc40 updates 58.0 KiB libevent x86_64 2.1.12-12.fc40 fedora 895.6 KiB libfdisk x86_64 2.40.1-1.fc40 updates 362.9 KiB libffi x86_64 3.4.4-7.fc40 fedora 81.6 KiB libgcc x86_64 14.2.1-3.fc40 updates 274.6 KiB libgomp x86_64 14.2.1-3.fc40 updates 523.6 KiB libidn2 x86_64 2.3.7-1.fc40 fedora 329.1 KiB libmount x86_64 2.40.1-1.fc40 updates 351.8 KiB libnghttp2 x86_64 1.59.0-3.fc40 updates 166.1 KiB libnsl2 x86_64 2.0.1-1.fc40 fedora 57.9 KiB libpkgconf x86_64 2.1.1-2.fc40 updates 74.2 KiB libpsl x86_64 0.21.5-3.fc40 fedora 80.5 KiB libpwquality x86_64 1.4.5-9.fc40 fedora 417.8 KiB libselinux x86_64 3.7-5.fc40 updates 177.0 KiB libsemanage x86_64 3.7-2.fc40 updates 293.5 KiB libsepol x86_64 3.7-2.fc40 updates 817.9 KiB libsmartcols x86_64 2.40.1-1.fc40 updates 180.4 KiB libssh x86_64 0.10.6-5.fc40 fedora 509.3 KiB libssh-config noarch 0.10.6-5.fc40 fedora 277.0 B libstdc++ x86_64 14.2.1-3.fc40 updates 2.8 MiB libtasn1 x86_64 4.19.0-6.fc40 fedora 175.7 KiB libtirpc x86_64 1.3.5-0.fc40 updates 202.7 KiB libtool-ltdl x86_64 2.4.7-10.fc40 fedora 66.2 KiB libunistring x86_64 1.1-7.fc40 fedora 1.7 MiB libutempter x86_64 1.2.1-13.fc40 fedora 57.7 KiB libuuid x86_64 2.40.1-1.fc40 updates 37.4 KiB libverto x86_64 0.3.2-8.fc40 fedora 29.5 KiB libxcrypt x86_64 4.4.36-5.fc40 fedora 262.8 KiB libxml2 x86_64 2.12.8-1.fc40 updates 1.7 MiB libzstd x86_64 1.5.6-1.fc40 updates 787.9 KiB lua-libs x86_64 5.4.6-5.fc40 fedora 281.1 KiB lua-srpm-macros noarch 1-13.fc40 fedora 1.3 KiB lz4-libs x86_64 1.9.4-6.fc40 fedora 129.4 KiB mpfr x86_64 4.2.1-4.fc40 updates 832.0 KiB ncurses-base noarch 6.4-12.20240127.fc40 fedora 326.2 KiB ncurses-libs x86_64 6.4-12.20240127.fc40 fedora 963.2 KiB ocaml-srpm-macros noarch 9-3.fc40 fedora 1.9 KiB openblas-srpm-macros noarch 2-16.fc40 fedora 104.0 B openldap x86_64 2.6.7-1.fc40 fedora 635.1 KiB openssl-libs x86_64 1:3.2.2-3.fc40 updates 7.8 MiB p11-kit x86_64 0.25.5-1.fc40 updates 2.2 MiB p11-kit-trust x86_64 0.25.5-1.fc40 updates 391.4 KiB package-notes-srpm-macros noarch 0.5-11.fc40 fedora 1.6 KiB pam x86_64 1.6.1-3.fc40 updates 1.8 MiB pam-libs x86_64 1.6.1-3.fc40 updates 135.0 KiB pcre2 x86_64 10.44-1.fc40 updates 653.5 KiB pcre2-syntax noarch 10.44-1.fc40 updates 251.6 KiB perl-srpm-macros noarch 1-53.fc40 fedora 861.0 B pkgconf x86_64 2.1.1-2.fc40 updates 82.9 KiB pkgconf-m4 noarch 2.1.1-2.fc40 updates 13.9 KiB pkgconf-pkg-config x86_64 2.1.1-2.fc40 updates 989.0 B popt x86_64 1.19-6.fc40 fedora 136.9 KiB publicsuffix-list-dafsa noarch 20240107-3.fc40 fedora 67.5 KiB pyproject-srpm-macros noarch 1.15.0-1.fc40 updates 1.9 KiB python-srpm-macros noarch 3.12-8.fc40 updates 50.6 KiB qt5-srpm-macros noarch 5.15.15-1.fc40 updates 500.0 B qt6-srpm-macros noarch 6.7.2-2.fc40 updates 456.0 B readline x86_64 8.2-8.fc40 fedora 489.2 KiB rpm x86_64 4.19.1.1-1.fc40 fedora 3.0 MiB rpm-build-libs x86_64 4.19.1.1-1.fc40 fedora 198.4 KiB rpm-libs x86_64 4.19.1.1-1.fc40 fedora 709.9 KiB rpm-sequoia x86_64 1.7.0-1.fc40 updates 2.4 MiB rust-srpm-macros noarch 26.3-1.fc40 updates 4.8 KiB setup noarch 2.14.5-2.fc40 fedora 720.4 KiB sqlite-libs x86_64 3.45.1-2.fc40 fedora 1.4 MiB systemd-libs x86_64 255.12-1.fc40 updates 1.9 MiB util-linux-core x86_64 2.40.1-1.fc40 updates 1.5 MiB xxhash-libs x86_64 0.8.2-2.fc40 fedora 88.5 KiB xz-libs x86_64 1:5.4.6-3.fc40 fedora 209.8 KiB zig-srpm-macros noarch 1-2.fc40 fedora 1.1 KiB zip x86_64 3.0-40.fc40 fedora 703.2 KiB zlib-ng-compat x86_64 2.1.7-2.fc40 updates 134.0 KiB zstd x86_64 1.5.6-1.fc40 updates 1.7 MiB Installing groups: Buildsystem building group Transaction Summary: Installing: 152 packages Total size of inbound packages is 53 MiB. Need to download 53 MiB. After this operation 179 MiB will be used (install 179 MiB, remove 0 B). [ 1/152] bzip2-0:1.0.8-18.fc40.x86_64 100% | 934.9 KiB/s | 52.4 KiB | 00m00s [ 2/152] cpio-0:2.15-1.fc40.x86_64 100% | 2.1 MiB/s | 292.2 KiB | 00m00s [ 3/152] diffutils-0:3.10-5.fc40.x86_6 100% | 4.4 MiB/s | 405.6 KiB | 00m00s [ 4/152] grep-0:3.11-7.fc40.x86_64 100% | 4.2 MiB/s | 300.2 KiB | 00m00s [ 5/152] gzip-0:1.13-1.fc40.x86_64 100% | 2.6 MiB/s | 170.6 KiB | 00m00s [ 6/152] patch-0:2.7.6-24.fc40.x86_64 100% | 2.5 MiB/s | 130.7 KiB | 00m00s [ 7/152] info-0:7.1-2.fc40.x86_64 100% | 2.6 MiB/s | 182.3 KiB | 00m00s [ 8/152] rpm-build-0:4.19.1.1-1.fc40.x 100% | 1.1 MiB/s | 78.2 KiB | 00m00s [ 9/152] bash-0:5.2.26-3.fc40.x86_64 100% | 5.3 MiB/s | 1.8 MiB | 00m00s [ 10/152] sed-0:4.9-1.fc40.x86_64 100% | 3.3 MiB/s | 318.2 KiB | 00m00s [ 11/152] which-0:2.21-41.fc40.x86_64 100% | 702.5 KiB/s | 41.4 KiB | 00m00s [ 12/152] unzip-0:6.0-63.fc40.x86_64 100% | 576.7 KiB/s | 184.5 KiB | 00m00s [ 13/152] tar-2:1.35-3.fc40.x86_64 100% | 2.0 MiB/s | 856.6 KiB | 00m00s [ 14/152] fedora-release-common-0:40-39 100% | 70.5 KiB/s | 21.3 KiB | 00m00s [ 15/152] xz-1:5.4.6-3.fc40.x86_64 100% | 661.2 KiB/s | 557.4 KiB | 00m01s [ 16/152] findutils-1:4.9.0-9.fc40.x86_ 100% | 733.5 KiB/s | 491.4 KiB | 00m01s [ 17/152] coreutils-0:9.4-8.fc40.x86_64 100% | 978.1 KiB/s | 1.1 MiB | 00m01s [ 18/152] glibc-minimal-langpack-0:2.39 100% | 713.5 KiB/s | 106.3 KiB | 00m00s [ 19/152] redhat-rpm-config-0:288-1.fc4 100% | 774.5 KiB/s | 82.1 KiB | 00m00s [ 20/152] gawk-0:5.3.0-3.fc40.x86_64 100% | 1.4 MiB/s | 1.1 MiB | 00m01s [ 21/152] util-linux-0:2.40.1-1.fc40.x8 100% | 4.0 MiB/s | 1.2 MiB | 00m00s [ 22/152] ncurses-libs-0:6.4-12.2024012 100% | 5.4 MiB/s | 332.5 KiB | 00m00s [ 23/152] bzip2-libs-0:1.0.8-18.fc40.x8 100% | 1.3 MiB/s | 40.9 KiB | 00m00s [ 24/152] libattr-0:2.5.2-3.fc40.x86_64 100% | 409.0 KiB/s | 18.0 KiB | 00m00s [ 25/152] filesystem-0:3.18-8.fc40.x86_ 100% | 2.5 MiB/s | 1.1 MiB | 00m00s [ 26/152] debugedit-0:5.0-14.fc40.x86_6 100% | 1.5 MiB/s | 78.7 KiB | 00m00s [ 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40/152] dwz-0:0.15-6.fc40.x86_64 100% | 2.5 MiB/s | 137.8 KiB | 00m00s [ 41/152] coreutils-common-0:9.4-8.fc40 100% | 11.0 MiB/s | 2.1 MiB | 00m00s [ 42/152] efi-srpm-macros-0:5-11.fc40.n 100% | 474.4 KiB/s | 22.3 KiB | 00m00s [ 43/152] fonts-srpm-macros-1:2.0.5-14. 100% | 646.8 KiB/s | 26.5 KiB | 00m00s [ 44/152] fpc-srpm-macros-0:1.3-12.fc40 100% | 270.1 KiB/s | 7.8 KiB | 00m00s [ 45/152] ghc-srpm-macros-0:1.9-1.fc40. 100% | 301.7 KiB/s | 8.7 KiB | 00m00s [ 46/152] gnat-srpm-macros-0:6-5.fc40.n 100% | 339.4 KiB/s | 8.8 KiB | 00m00s [ 47/152] glibc-common-0:2.39-22.fc40.x 100% | 1.5 MiB/s | 390.4 KiB | 00m00s [ 48/152] go-srpm-macros-0:3.5.0-1.fc40 100% | 918.3 KiB/s | 27.5 KiB | 00m00s [ 49/152] kernel-srpm-macros-0:1.0-23.f 100% | 324.3 KiB/s | 9.7 KiB | 00m00s [ 50/152] ocaml-srpm-macros-0:9-3.fc40. 100% | 394.5 KiB/s | 9.1 KiB | 00m00s [ 51/152] lua-srpm-macros-0:1-13.fc40.n 100% | 323.4 KiB/s | 8.7 KiB | 00m00s [ 52/152] openblas-srpm-macros-0:2-16.f 100% | 234.4 KiB/s | 7.5 KiB | 00m00s [ 53/152] package-notes-srpm-macros-0:0 100% | 414.3 KiB/s | 9.9 KiB | 00m00s [ 54/152] perl-srpm-macros-0:1-53.fc40. 100% | 310.4 KiB/s | 8.4 KiB | 00m00s [ 55/152] zig-srpm-macros-0:1-2.fc40.no 100% | 321.6 KiB/s | 8.0 KiB | 00m00s [ 56/152] setup-0:2.14.5-2.fc40.noarch 100% | 2.9 MiB/s | 154.7 KiB | 00m00s [ 57/152] libxcrypt-0:4.4.36-5.fc40.x86 100% | 1.9 MiB/s | 118.1 KiB | 00m00s [ 58/152] zip-0:3.0-40.fc40.x86_64 100% | 3.3 MiB/s | 264.8 KiB | 00m00s [ 59/152] libutempter-0:1.2.1-13.fc40.x 100% | 538.9 KiB/s | 26.4 KiB | 00m00s [ 60/152] libcap-ng-0:0.8.4-4.fc40.x86_ 100% | 518.2 KiB/s | 32.6 KiB | 00m00s [ 61/152] util-linux-core-0:2.40.1-1.fc 100% | 5.8 MiB/s | 537.0 KiB | 00m00s [ 62/152] ncurses-base-0:6.4-12.2024012 100% | 2.0 MiB/s | 88.8 KiB | 00m00s [ 63/152] elfutils-debuginfod-client-0: 100% | 1.1 MiB/s | 38.5 KiB | 00m00s [ 64/152] elfutils-libs-0:0.191-4.fc40. 100% | 3.1 MiB/s | 259.9 KiB | 00m00s [ 65/152] lua-libs-0:5.4.6-5.fc40.x86_6 100% | 2.4 MiB/s | 131.9 KiB | 00m00s [ 66/152] file-libs-0:5.45-4.fc40.x86_6 100% | 9.7 MiB/s | 762.7 KiB | 00m00s [ 67/152] elfutils-default-yama-scope-0 100% | 615.3 KiB/s | 13.5 KiB | 00m00s [ 68/152] sqlite-libs-0:3.45.1-2.fc40.x 100% | 9.1 MiB/s | 705.1 KiB | 00m00s [ 69/152] basesystem-0:11-20.fc40.noarc 100% | 194.3 KiB/s | 7.2 KiB | 00m00s [ 70/152] glibc-0:2.39-22.fc40.x86_64 100% | 16.7 MiB/s | 2.2 MiB | 00m00s [ 71/152] libsepol-0:3.7-2.fc40.x86_64 100% | 1.8 MiB/s | 342.2 KiB | 00m00s [ 72/152] zlib-ng-compat-0:2.1.7-2.fc40 100% | 959.0 KiB/s | 77.7 KiB | 00m00s [ 73/152] libcap-0:2.69-8.fc40.x86_64 100% | 1.0 MiB/s | 85.7 KiB | 00m00s [ 74/152] libzstd-0:1.5.6-1.fc40.x86_64 100% | 3.4 MiB/s | 309.2 KiB | 00m00s [ 75/152] libselinux-0:3.7-5.fc40.x86_6 100% | 168.8 KiB/s | 88.0 KiB | 00m01s [ 76/152] rpm-sequoia-0:1.7.0-1.fc40.x8 100% | 4.4 MiB/s | 892.8 KiB | 00m00s [ 77/152] glibc-gconv-extra-0:2.39-22.f 100% | 2.2 MiB/s | 1.7 MiB | 00m01s [ 78/152] libgcc-0:14.2.1-3.fc40.x86_64 100% | 620.0 KiB/s | 133.3 KiB | 00m00s [ 79/152] libgomp-0:14.2.1-3.fc40.x86_6 100% | 3.8 MiB/s | 353.9 KiB | 00m00s [ 80/152] jansson-0:2.13.1-9.fc40.x86_6 100% | 513.7 KiB/s | 44.2 KiB | 00m00s [ 81/152] pkgconf-pkg-config-0:2.1.1-2. 100% | 113.2 KiB/s | 9.8 KiB | 00m00s [ 82/152] pkgconf-0:2.1.1-2.fc40.x86_64 100% | 465.4 KiB/s | 43.7 KiB | 00m00s [ 83/152] pkgconf-m4-0:2.1.1-2.fc40.noa 100% | 157.8 KiB/s | 14.0 KiB | 00m00s [ 84/152] zstd-0:1.5.6-1.fc40.x86_64 100% | 5.3 MiB/s | 479.4 KiB | 00m00s [ 85/152] lz4-libs-0:1.9.4-6.fc40.x86_6 100% | 1.2 MiB/s | 67.2 KiB | 00m00s [ 86/152] libpkgconf-0:2.1.1-2.fc40.x86 100% | 146.5 KiB/s | 37.9 KiB | 00m00s [ 87/152] libarchive-0:3.7.2-4.fc40.x86 100% | 1.7 MiB/s | 406.7 KiB | 00m00s [ 88/152] ed-0:1.20.2-1.fc40.x86_64 100% | 450.1 KiB/s | 81.9 KiB | 00m00s [ 89/152] pcre2-0:10.44-1.fc40.x86_64 100% | 2.1 MiB/s | 242.9 KiB | 00m00s [ 90/152] curl-0:8.6.0-10.fc40.x86_64 100% | 473.5 KiB/s | 299.2 KiB | 00m01s [ 91/152] pcre2-syntax-0:10.44-1.fc40.n 100% | 1.4 MiB/s | 149.8 KiB | 00m00s [ 92/152] forge-srpm-macros-0:0.3.2-1.f 100% | 242.8 KiB/s | 19.7 KiB | 00m00s [ 93/152] mpfr-0:4.2.1-4.fc40.x86_64 100% | 1.6 MiB/s | 348.9 KiB | 00m00s [ 94/152] libstdc++-0:14.2.1-3.fc40.x86 100% | 3.7 MiB/s | 886.5 KiB | 00m00s [ 95/152] libuuid-0:2.40.1-1.fc40.x86_6 100% | 309.2 KiB/s | 28.4 KiB | 00m00s [ 96/152] libblkid-0:2.40.1-1.fc40.x86_ 100% | 675.3 KiB/s | 124.3 KiB | 00m00s [ 97/152] libmount-0:2.40.1-1.fc40.x86_ 100% | 1.5 MiB/s | 154.6 KiB | 00m00s [ 98/152] libsmartcols-0:2.40.1-1.fc40. 100% | 744.0 KiB/s | 83.3 KiB | 00m00s [ 99/152] systemd-libs-0:255.12-1.fc40. 100% | 3.7 MiB/s | 707.2 KiB | 00m00s [100/152] audit-libs-0:4.0.2-1.fc40.x86 100% | 975.0 KiB/s | 125.8 KiB | 00m00s [101/152] libfdisk-0:2.40.1-1.fc40.x86_ 100% | 1.4 MiB/s | 159.4 KiB | 00m00s [102/152] pam-libs-0:1.6.1-3.fc40.x86_6 100% | 601.0 KiB/s | 57.1 KiB | 00m00s [103/152] pam-0:1.6.1-3.fc40.x86_64 100% | 1.5 MiB/s | 553.4 KiB | 00m00s [104/152] binutils-0:2.41-37.fc40.x86_6 100% | 2.9 MiB/s | 6.2 MiB | 00m02s [105/152] gdbm-libs-1:1.23-6.fc40.x86_6 100% | 1.2 MiB/s | 56.2 KiB | 00m00s [106/152] libnsl2-0:2.0.1-1.fc40.x86_64 100% | 821.4 KiB/s | 29.6 KiB | 00m00s [107/152] libpwquality-0:1.4.5-9.fc40.x 100% | 2.2 MiB/s | 119.7 KiB | 00m00s [108/152] authselect-libs-0:1.5.0-5.fc4 100% | 3.1 MiB/s | 218.6 KiB | 00m00s [109/152] cracklib-0:2.9.11-5.fc40.x86_ 100% | 1.8 MiB/s | 92.5 KiB | 00m00s [110/152] authselect-0:1.5.0-5.fc40.x86 100% | 418.8 KiB/s | 146.2 KiB | 00m00s [111/152] libeconf-0:0.6.2-2.fc40.x86_6 100% | 376.0 KiB/s | 32.0 KiB | 00m00s [112/152] libsemanage-0:3.7-2.fc40.x86_ 100% | 1.1 MiB/s | 116.1 KiB | 00m00s [113/152] pyproject-srpm-macros-0:1.15. 100% | 169.6 KiB/s | 13.6 KiB | 00m00s [114/152] python-srpm-macros-0:3.12-8.f 100% | 278.4 KiB/s | 23.4 KiB | 00m00s [115/152] qt5-srpm-macros-0:5.15.15-1.f 100% | 111.3 KiB/s | 8.9 KiB | 00m00s [116/152] qt6-srpm-macros-0:6.7.2-2.fc4 100% | 111.1 KiB/s | 9.0 KiB | 00m00s [117/152] rust-srpm-macros-0:26.3-1.fc4 100% | 156.4 KiB/s | 12.5 KiB | 00m00s [118/152] libcom_err-0:1.47.0-5.fc40.x8 100% | 768.3 KiB/s | 25.4 KiB | 00m00s [119/152] libtirpc-0:1.3.5-0.fc40.x86_6 100% | 931.4 KiB/s | 94.1 KiB | 00m00s [120/152] gdbm-1:1.23-6.fc40.x86_64 100% | 2.9 MiB/s | 152.5 KiB | 00m00s [121/152] crypto-policies-0:20240725-1. 100% | 972.6 KiB/s | 99.2 KiB | 00m00s [122/152] ca-certificates-0:2024.2.69_v 100% | 4.3 MiB/s | 871.2 KiB | 00m00s [123/152] keyutils-libs-0:1.6.3-3.fc40. 100% | 767.5 KiB/s | 31.5 KiB | 00m00s [124/152] libverto-0:0.3.2-8.fc40.x86_6 100% | 604.1 KiB/s | 20.5 KiB | 00m00s [125/152] openssl-libs-1:3.2.2-3.fc40.x 100% | 3.5 MiB/s | 2.3 MiB | 00m01s [126/152] krb5-libs-0:1.21.3-1.fc40.x86 100% | 3.1 MiB/s | 757.0 KiB | 00m00s [127/152] fedora-repos-0:40-2.noarch 100% | 112.9 KiB/s | 9.5 KiB | 00m00s [128/152] libxml2-0:2.12.8-1.fc40.x86_6 100% | 3.9 MiB/s | 687.1 KiB | 00m00s [129/152] fedora-gpg-keys-0:40-2.noarch 100% | 1.2 MiB/s | 132.1 KiB | 00m00s [130/152] libffi-0:3.4.4-7.fc40.x86_64 100% | 984.2 KiB/s | 39.4 KiB | 00m00s [131/152] libtasn1-0:4.19.0-6.fc40.x86_ 100% | 1.3 MiB/s | 73.7 KiB | 00m00s [132/152] p11-kit-0:0.25.5-1.fc40.x86_6 100% | 3.0 MiB/s | 491.2 KiB | 00m00s [133/152] p11-kit-trust-0:0.25.5-1.fc40 100% | 1.3 MiB/s | 132.0 KiB | 00m00s [134/152] alternatives-0:1.27-1.fc40.x8 100% | 473.6 KiB/s | 40.7 KiB | 00m00s [135/152] fedora-release-0:40-39.noarch 100% | 135.1 KiB/s | 10.8 KiB | 00m00s [136/152] xxhash-libs-0:0.8.2-2.fc40.x8 100% | 769.6 KiB/s | 36.9 KiB | 00m00s [137/152] binutils-gold-0:2.41-37.fc40. 100% | 3.9 MiB/s | 780.6 KiB | 00m00s [138/152] libbrotli-0:1.1.0-3.fc40.x86_ 100% | 4.1 MiB/s | 338.4 KiB | 00m00s [139/152] libcurl-0:8.6.0-10.fc40.x86_6 100% | 2.7 MiB/s | 344.8 KiB | 00m00s [140/152] libpsl-0:0.21.5-3.fc40.x86_64 100% | 1.6 MiB/s | 63.9 KiB | 00m00s [141/152] libidn2-0:2.3.7-1.fc40.x86_64 100% | 2.2 MiB/s | 118.7 KiB | 00m00s [142/152] libssh-0:0.10.6-5.fc40.x86_64 100% | 3.2 MiB/s | 210.6 KiB | 00m00s [143/152] openldap-0:2.6.7-1.fc40.x86_6 100% | 2.6 MiB/s | 254.3 KiB | 00m00s [144/152] gdb-minimal-0:15.1-1.fc40.x86 100% | 6.1 MiB/s | 4.3 MiB | 00m01s [145/152] libssh-config-0:0.10.6-5.fc40 100% | 392.6 KiB/s | 9.0 KiB | 00m00s [146/152] publicsuffix-list-dafsa-0:202 100% | 167.9 KiB/s | 58.1 KiB | 00m00s [147/152] libunistring-0:1.1-7.fc40.x86 100% | 1.3 MiB/s | 545.5 KiB | 00m00s [148/152] libtool-ltdl-0:2.4.7-10.fc40. 100% | 977.2 KiB/s | 36.2 KiB | 00m00s [149/152] libevent-0:2.1.12-12.fc40.x86 100% | 4.3 MiB/s | 257.2 KiB | 00m00s [150/152] cyrus-sasl-lib-0:2.1.28-19.fc 100% | 10.1 MiB/s | 789.3 KiB | 00m00s [151/152] fedora-release-identity-basic 100% | 146.7 KiB/s | 11.6 KiB | 00m00s [152/152] libnghttp2-0:1.59.0-3.fc40.x8 100% | 855.9 KiB/s | 75.3 KiB | 00m00s -------------------------------------------------------------------------------- [152/152] Total 100% | 6.4 MiB/s | 52.8 MiB | 00m08s Running transaction Importing PGP key 0xA15B79CC: Userid : "Fedora (40) " Fingerprint: 115DF9AEF857853EE8445D0A0727707EA15B79CC From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-40-primary The key was successfully imported. [ 1/154] Verify package files 100% | 598.0 B/s | 152.0 B | 00m00s >>> Running pre-transaction scriptlet: filesystem-0:3.18-8.fc40.x86_64 >>> Stop pre-transaction scriptlet: filesystem-0:3.18-8.fc40.x86_64 [ 2/154] Prepare transaction 100% | 1.3 KiB/s | 152.0 B | 00m00s [ 3/154] Installing libgcc-0:14.2.1-3. 100% | 67.5 MiB/s | 276.3 KiB | 00m00s >>> Running post-install scriptlet: libgcc-0:14.2.1-3.fc40.x86_64 >>> Stop post-install scriptlet: libgcc-0:14.2.1-3.fc40.x86_64 [ 4/154] Installing crypto-policies-0: 100% | 10.7 MiB/s | 185.9 KiB | 00m00s >>> Running post-install scriptlet: crypto-policies-0:20240725-1.git28d3e2d.fc40 >>> Stop post-install scriptlet: crypto-policies-0:20240725-1.git28d3e2d.fc40.no [ 5/154] Installing fedora-release-ide 100% | 890.6 KiB/s | 912.0 B | 00m00s [ 6/154] Installing fedora-gpg-keys-0: 100% | 12.7 MiB/s | 169.7 KiB | 00m00s [ 7/154] Installing fedora-repos-0:40- 100% | 5.6 MiB/s | 5.7 KiB | 00m00s [ 8/154] Installing fedora-release-com 100% | 7.6 MiB/s | 23.3 KiB | 00m00s [ 9/154] Installing fedora-release-0:4 100% | 121.1 KiB/s | 124.0 B | 00m00s [ 10/154] Installing setup-0:2.14.5-2.f 100% | 32.2 MiB/s | 725.8 KiB | 00m00s >>> Running post-install scriptlet: setup-0:2.14.5-2.fc40.noarch >>> Stop post-install scriptlet: setup-0:2.14.5-2.fc40.noarch [ 11/154] Installing filesystem-0:3.18- 100% | 1.2 MiB/s | 212.4 KiB | 00m00s [ 12/154] Installing basesystem-0:11-20 100% | 121.1 KiB/s | 124.0 B | 00m00s [ 13/154] Installing libssh-config-0:0. 100% | 796.9 KiB/s | 816.0 B | 00m00s [ 14/154] Installing publicsuffix-list- 100% | 66.7 MiB/s | 68.3 KiB | 00m00s [ 15/154] Installing rust-srpm-macros-0 100% | 5.4 MiB/s | 5.6 KiB | 00m00s [ 16/154] Installing qt6-srpm-macros-0: 100% | 714.8 KiB/s | 732.0 B | 00m00s [ 17/154] Installing qt5-srpm-macros-0: 100% | 757.8 KiB/s | 776.0 B | 00m00s [ 18/154] Installing pcre2-syntax-0:10. 100% | 82.7 MiB/s | 254.1 KiB | 00m00s [ 19/154] Installing pkgconf-m4-0:2.1.1 100% | 7.0 MiB/s | 14.3 KiB | 00m00s [ 20/154] Installing ncurses-base-0:6.4 100% | 22.9 MiB/s | 351.6 KiB | 00m00s [ 21/154] Installing glibc-minimal-lang 100% | 121.1 KiB/s | 124.0 B | 00m00s [ 22/154] Installing ncurses-libs-0:6.4 100% | 86.1 MiB/s | 969.7 KiB | 00m00s >>> Running pre-install scriptlet: glibc-0:2.39-22.fc40.x86_64 >>> Stop pre-install scriptlet: glibc-0:2.39-22.fc40.x86_64 [ 23/154] Installing glibc-0:2.39-22.fc 100% | 93.3 MiB/s | 6.6 MiB | 00m00s >>> Running post-install scriptlet: glibc-0:2.39-22.fc40.x86_64 >>> Stop post-install scriptlet: glibc-0:2.39-22.fc40.x86_64 [ 24/154] Installing bash-0:5.2.26-3.fc 100% | 233.2 MiB/s | 8.2 MiB | 00m00s >>> Running post-install scriptlet: bash-0:5.2.26-3.fc40.x86_64 >>> Stop post-install scriptlet: bash-0:5.2.26-3.fc40.x86_64 [ 25/154] Installing glibc-common-0:2.3 100% | 102.9 MiB/s | 1.0 MiB | 00m00s [ 26/154] Installing glibc-gconv-extra- 100% | 105.2 MiB/s | 7.9 MiB | 00m00s >>> Running post-install scriptlet: glibc-gconv-extra-0:2.39-22.fc40.x86_64 >>> Stop post-install scriptlet: glibc-gconv-extra-0:2.39-22.fc40.x86_64 [ 27/154] Installing zlib-ng-compat-0:2 100% | 131.6 MiB/s | 134.8 KiB | 00m00s [ 28/154] Installing xz-libs-1:5.4.6-3. 100% | 206.0 MiB/s | 210.9 KiB | 00m00s [ 29/154] Installing bzip2-libs-0:1.0.8 100% | 79.9 MiB/s | 81.8 KiB | 00m00s [ 30/154] Installing popt-0:1.19-6.fc40 100% | 9.3 MiB/s | 143.5 KiB | 00m00s [ 31/154] Installing readline-0:8.2-8.f 100% | 160.0 MiB/s | 491.4 KiB | 00m00s [ 32/154] Installing libzstd-0:1.5.6-1. 100% | 154.1 MiB/s | 789.2 KiB | 00m00s [ 33/154] Installing elfutils-libelf-0: 100% | 36.5 MiB/s | 1.2 MiB | 00m00s [ 34/154] Installing libstdc++-0:14.2.1 100% | 92.2 MiB/s | 2.8 MiB | 00m00s [ 35/154] Installing libuuid-0:2.40.1-1 100% | 37.5 MiB/s | 38.4 KiB | 00m00s [ 36/154] Installing libblkid-0:2.40.1- 100% | 126.8 MiB/s | 259.7 KiB | 00m00s [ 37/154] Installing libattr-0:2.5.2-3. 100% | 28.8 MiB/s | 29.5 KiB | 00m00s [ 38/154] Installing libacl-0:2.3.2-1.f 100% | 39.9 MiB/s | 40.8 KiB | 00m00s [ 39/154] Installing gmp-1:6.2.1-8.fc40 100% | 194.5 MiB/s | 796.8 KiB | 00m00s [ 40/154] Installing libxcrypt-0:4.4.36 100% | 129.7 MiB/s | 265.5 KiB | 00m00s [ 41/154] Installing lz4-libs-0:1.9.4-6 100% | 127.4 MiB/s | 130.5 KiB | 00m00s [ 42/154] Installing gdbm-libs-1:1.23-6 100% | 120.7 MiB/s | 123.6 KiB | 00m00s [ 43/154] Installing libeconf-0:0.6.2-2 100% | 58.3 MiB/s | 59.6 KiB | 00m00s [ 44/154] Installing mpfr-0:4.2.1-4.fc4 100% | 135.7 MiB/s | 833.7 KiB | 00m00s [ 45/154] Installing gawk-0:5.3.0-3.fc4 100% | 75.1 MiB/s | 1.7 MiB | 00m00s [ 46/154] Installing dwz-0:0.15-6.fc40. 100% | 142.7 MiB/s | 292.3 KiB | 00m00s [ 47/154] Installing unzip-0:6.0-63.fc4 100% | 125.8 MiB/s | 386.3 KiB | 00m00s [ 48/154] Installing file-libs-0:5.45-4 100% | 42.3 MiB/s | 9.9 MiB | 00m00s [ 49/154] Installing file-0:5.45-4.fc40 100% | 51.3 MiB/s | 105.0 KiB | 00m00s [ 50/154] Installing libcap-ng-0:0.8.4- 100% | 73.2 MiB/s | 75.0 KiB | 00m00s [ 51/154] Installing audit-libs-0:4.0.2 100% | 160.8 MiB/s | 329.3 KiB | 00m00s [ 52/154] Installing pam-libs-0:1.6.1-3 100% | 67.1 MiB/s | 137.4 KiB | 00m00s [ 53/154] Installing libcap-0:2.69-8.fc 100% | 54.9 MiB/s | 224.8 KiB | 00m00s [ 54/154] Installing systemd-libs-0:255 100% | 137.9 MiB/s | 1.9 MiB | 00m00s [ 55/154] Installing lua-libs-0:5.4.6-5 100% | 68.9 MiB/s | 282.3 KiB | 00m00s [ 56/154] Installing libsepol-0:3.7-2.f 100% | 266.5 MiB/s | 818.8 KiB | 00m00s [ 57/154] Installing jansson-0:2.13.1-9 100% | 87.6 MiB/s | 89.7 KiB | 00m00s [ 58/154] Installing pcre2-0:10.44-1.fc 100% | 127.9 MiB/s | 654.9 KiB | 00m00s [ 59/154] Installing libselinux-0:3.7-5 100% | 87.0 MiB/s | 178.3 KiB | 00m00s [ 60/154] Installing sed-0:4.9-1.fc40.x 100% | 106.2 MiB/s | 869.7 KiB | 00m00s [ 61/154] Installing grep-0:3.11-7.fc40 100% | 38.6 MiB/s | 1.0 MiB | 00m00s [ 62/154] Installing findutils-1:4.9.0- 100% | 133.3 MiB/s | 1.5 MiB | 00m00s [ 63/154] Installing xz-1:5.4.6-3.fc40. 100% | 117.8 MiB/s | 2.0 MiB | 00m00s [ 64/154] Installing libmount-0:2.40.1- 100% | 68.9 MiB/s | 352.8 KiB | 00m00s [ 65/154] Installing libsmartcols-0:2.4 100% | 88.6 MiB/s | 181.5 KiB | 00m00s [ 66/154] Installing libcom_err-0:1.47. 100% | 66.7 MiB/s | 68.3 KiB | 00m00s [ 67/154] Installing libffi-0:3.4.4-7.f 100% | 81.0 MiB/s | 83.0 KiB | 00m00s [ 68/154] Installing libtasn1-0:4.19.0- 100% | 86.7 MiB/s | 177.5 KiB | 00m00s [ 69/154] Installing p11-kit-0:0.25.5-1 100% | 105.1 MiB/s | 2.2 MiB | 00m00s [ 70/154] Installing alternatives-0:1.2 100% | 66.4 MiB/s | 68.0 KiB | 00m00s [ 71/154] Installing libunistring-0:1.1 100% | 173.1 MiB/s | 1.7 MiB | 00m00s [ 72/154] Installing libidn2-0:2.3.7-1. 100% | 65.4 MiB/s | 335.0 KiB | 00m00s [ 73/154] Installing libpsl-0:0.21.5-3. 100% | 79.7 MiB/s | 81.6 KiB | 00m00s [ 74/154] Installing p11-kit-trust-0:0. 100% | 17.5 MiB/s | 393.1 KiB | 00m00s >>> Running post-install scriptlet: p11-kit-trust-0:0.25.5-1.fc40.x86_64 >>> Stop post-install scriptlet: p11-kit-trust-0:0.25.5-1.fc40.x86_64 [ 75/154] Installing util-linux-core-0: 100% | 92.9 MiB/s | 1.5 MiB | 00m00s [ 76/154] Installing tar-2:1.35-3.fc40. 100% | 140.5 MiB/s | 3.0 MiB | 00m00s [ 77/154] Installing libsemanage-0:3.7- 100% | 96.1 MiB/s | 295.2 KiB | 00m00s [ 78/154] Installing shadow-utils-2:4.1 100% | 58.7 MiB/s | 4.2 MiB | 00m00s >>> Running pre-install scriptlet: libutempter-0:1.2.1-13.fc40.x86_64 >>> Stop pre-install scriptlet: libutempter-0:1.2.1-13.fc40.x86_64 [ 79/154] Installing libutempter-0:1.2. 100% | 19.4 MiB/s | 59.7 KiB | 00m00s [ 80/154] Installing zip-0:3.0-40.fc40. 100% | 86.3 MiB/s | 707.1 KiB | 00m00s [ 81/154] Installing gdbm-1:1.23-6.fc40 100% | 91.0 MiB/s | 465.8 KiB | 00m00s [ 82/154] Installing cyrus-sasl-lib-0:2 100% | 175.6 MiB/s | 2.3 MiB | 00m00s [ 83/154] Installing zstd-0:1.5.6-1.fc4 100% | 55.9 MiB/s | 1.7 MiB | 00m00s [ 84/154] Installing libfdisk-0:2.40.1- 100% | 88.9 MiB/s | 364.0 KiB | 00m00s [ 85/154] Installing bzip2-0:1.0.8-18.f 100% | 47.0 MiB/s | 96.2 KiB | 00m00s [ 86/154] Installing libxml2-0:2.12.8-1 100% | 142.7 MiB/s | 1.7 MiB | 00m00s [ 87/154] Installing sqlite-libs-0:3.45 100% | 46.7 MiB/s | 1.4 MiB | 00m00s [ 88/154] Installing elfutils-default-y 100% | 120.2 KiB/s | 2.0 KiB | 00m00s >>> Running post-install scriptlet: elfutils-default-yama-scope-0:0.191-4.fc40.n >>> Stop post-install scriptlet: elfutils-default-yama-scope-0:0.191-4.fc40.noar [ 89/154] Installing ed-0:1.20.2-1.fc40 100% | 48.6 MiB/s | 149.2 KiB | 00m00s [ 90/154] Installing patch-0:2.7.6-24.f 100% | 86.0 MiB/s | 264.3 KiB | 00m00s [ 91/154] Installing cpio-0:2.15-1.fc40 100% | 84.6 MiB/s | 1.1 MiB | 00m00s [ 92/154] Installing diffutils-0:3.10-5 100% | 69.0 MiB/s | 1.6 MiB | 00m00s [ 93/154] Installing libgomp-0:14.2.1-3 100% | 170.9 MiB/s | 525.0 KiB | 00m00s [ 94/154] Installing libpkgconf-0:2.1.1 100% | 73.5 MiB/s | 75.3 KiB | 00m00s [ 95/154] Installing pkgconf-0:2.1.1-2. 100% | 41.7 MiB/s | 85.4 KiB | 00m00s [ 96/154] Installing pkgconf-pkg-config 100% | 886.7 KiB/s | 1.8 KiB | 00m00s [ 97/154] Installing keyutils-libs-0:1. 100% | 54.5 MiB/s | 55.8 KiB | 00m00s [ 98/154] Installing libverto-0:0.3.2-8 100% | 30.5 MiB/s | 31.3 KiB | 00m00s [ 99/154] Installing xxhash-libs-0:0.8. 100% | 87.8 MiB/s | 89.9 KiB | 00m00s [100/154] Installing libbrotli-0:1.1.0- 100% | 135.4 MiB/s | 831.8 KiB | 00m00s [101/154] Installing libtool-ltdl-0:2.4 100% | 16.4 MiB/s | 67.3 KiB | 00m00s [102/154] Installing libnghttp2-0:1.59. 100% | 81.6 MiB/s | 167.2 KiB | 00m00s [103/154] Installing perl-srpm-macros-0 100% | 0.0 B/s | 1.1 KiB | 00m00s [104/154] Installing package-notes-srpm 100% | 2.0 MiB/s | 2.0 KiB | 00m00s [105/154] Installing openblas-srpm-macr 100% | 375.0 KiB/s | 384.0 B | 00m00s [106/154] Installing ocaml-srpm-macros- 100% | 2.1 MiB/s | 2.2 KiB | 00m00s [107/154] Installing kernel-srpm-macros 100% | 2.3 MiB/s | 2.3 KiB | 00m00s [108/154] Installing gnat-srpm-macros-0 100% | 0.0 B/s | 1.3 KiB | 00m00s [109/154] Installing ghc-srpm-macros-0: 100% | 0.0 B/s | 992.0 B | 00m00s [110/154] Installing fpc-srpm-macros-0: 100% | 410.2 KiB/s | 420.0 B | 00m00s [111/154] Installing ansible-srpm-macro 100% | 35.4 MiB/s | 36.2 KiB | 00m00s [112/154] Installing coreutils-common-0 100% | 92.5 MiB/s | 11.5 MiB | 00m00s [113/154] Installing openssl-libs-1:3.2 100% | 182.0 MiB/s | 7.8 MiB | 00m00s [114/154] Installing coreutils-0:9.4-8. 100% | 121.4 MiB/s | 5.8 MiB | 00m00s >>> Running pre-install scriptlet: ca-certificates-0:2024.2.69_v8.0.401-1.0.fc40 >>> Stop pre-install scriptlet: ca-certificates-0:2024.2.69_v8.0.401-1.0.fc40.no [115/154] Installing ca-certificates-0: 100% | 1.4 MiB/s | 2.4 MiB | 00m02s >>> Running post-install scriptlet: ca-certificates-0:2024.2.69_v8.0.401-1.0.fc4 >>> Stop post-install scriptlet: ca-certificates-0:2024.2.69_v8.0.401-1.0.fc40.n [116/154] Installing krb5-libs-0:1.21.3 100% | 164.2 MiB/s | 2.3 MiB | 00m00s [117/154] Installing libtirpc-0:1.3.5-0 100% | 66.6 MiB/s | 204.5 KiB | 00m00s [118/154] Installing gzip-0:1.13-1.fc40 100% | 95.4 MiB/s | 390.6 KiB | 00m00s [119/154] Installing authselect-libs-0: 100% | 81.4 MiB/s | 833.2 KiB | 00m00s [120/154] Installing libarchive-0:3.7.2 100% | 223.8 MiB/s | 916.6 KiB | 00m00s [121/154] Installing authselect-0:1.5.0 100% | 38.6 MiB/s | 157.9 KiB | 00m00s [122/154] Installing cracklib-0:2.9.11- 100% | 30.6 MiB/s | 250.3 KiB | 00m00s [123/154] Installing libpwquality-0:1.4 100% | 46.7 MiB/s | 430.1 KiB | 00m00s [124/154] Installing libnsl2-0:2.0.1-1. 100% | 28.8 MiB/s | 59.0 KiB | 00m00s [125/154] Installing pam-0:1.6.1-3.fc40 100% | 72.8 MiB/s | 1.8 MiB | 00m00s [126/154] Installing libssh-0:0.10.6-5. 100% | 166.5 MiB/s | 511.4 KiB | 00m00s [127/154] Installing rpm-sequoia-0:1.7. 100% | 263.1 MiB/s | 2.4 MiB | 00m00s [128/154] Installing rpm-libs-0:4.19.1. 100% | 173.7 MiB/s | 711.4 KiB | 00m00s [129/154] Installing libevent-0:2.1.12- 100% | 146.4 MiB/s | 899.4 KiB | 00m00s [130/154] Installing openldap-0:2.6.7-1 100% | 21.5 MiB/s | 638.9 KiB | 00m00s [131/154] Installing libcurl-0:8.6.0-10 100% | 151.9 MiB/s | 777.9 KiB | 00m00s [132/154] Installing elfutils-libs-0:0. 100% | 90.4 MiB/s | 648.0 KiB | 00m00s [133/154] Installing elfutils-debuginfo 100% | 21.8 MiB/s | 66.9 KiB | 00m00s [134/154] Installing binutils-0:2.41-37 100% | 128.2 MiB/s | 26.4 MiB | 00m00s >>> Running post-install scriptlet: binutils-0:2.41-37.fc40.x86_64 >>> Stop post-install scriptlet: binutils-0:2.41-37.fc40.x86_64 [135/154] Installing binutils-gold-0:2. 100% | 72.5 MiB/s | 2.0 MiB | 00m00s >>> Running post-install scriptlet: binutils-gold-0:2.41-37.fc40.x86_64 >>> Stop post-install scriptlet: binutils-gold-0:2.41-37.fc40.x86_64 [136/154] Installing elfutils-0:0.191-4 100% | 98.3 MiB/s | 2.6 MiB | 00m00s [137/154] Installing gdb-minimal-0:15.1 100% | 79.2 MiB/s | 13.0 MiB | 00m00s [138/154] Installing debugedit-0:5.0-14 100% | 49.2 MiB/s | 201.7 KiB | 00m00s [139/154] Installing rpm-build-libs-0:4 100% | 97.3 MiB/s | 199.2 KiB | 00m00s [140/154] Installing curl-0:8.6.0-10.fc 100% | 16.8 MiB/s | 740.9 KiB | 00m00s >>> Running pre-install scriptlet: rpm-0:4.19.1.1-1.fc40.x86_64 >>> Stop pre-install scriptlet: rpm-0:4.19.1.1-1.fc40.x86_64 [141/154] Installing rpm-0:4.19.1.1-1.f 100% | 61.5 MiB/s | 2.4 MiB | 00m00s [142/154] Installing efi-srpm-macros-0: 100% | 40.2 MiB/s | 41.2 KiB | 00m00s [143/154] Installing lua-srpm-macros-0: 100% | 1.9 MiB/s | 1.9 KiB | 00m00s [144/154] Installing zig-srpm-macros-0: 100% | 1.6 MiB/s | 1.7 KiB | 00m00s [145/154] Installing fonts-srpm-macros- 100% | 5.5 MiB/s | 56.5 KiB | 00m00s [146/154] Installing go-srpm-macros-0:3 100% | 60.2 MiB/s | 61.6 KiB | 00m00s [147/154] Installing forge-srpm-macros- 100% | 39.4 MiB/s | 40.4 KiB | 00m00s [148/154] Installing python-srpm-macros 100% | 50.6 MiB/s | 51.8 KiB | 00m00s [149/154] Installing redhat-rpm-config- 100% | 46.9 MiB/s | 191.9 KiB | 00m00s [150/154] Installing rpm-build-0:4.19.1 100% | 14.8 MiB/s | 182.0 KiB | 00m00s [151/154] Installing pyproject-srpm-mac 100% | 1.2 MiB/s | 2.5 KiB | 00m00s [152/154] Installing util-linux-0:2.40. 100% | 42.1 MiB/s | 3.7 MiB | 00m00s >>> Running post-install scriptlet: util-linux-0:2.40.1-1.fc40.x86_64 >>> Stop post-install scriptlet: util-linux-0:2.40.1-1.fc40.x86_64 [153/154] Installing which-0:2.21-41.fc 100% | 40.3 MiB/s | 82.4 KiB | 00m00s [154/154] Installing info-0:7.1-2.fc40. 100% | 203.9 KiB/s | 358.2 KiB | 00m02s >>> Running post-transaction scriptlet: filesystem-0:3.18-8.fc40.x86_64 >>> Stop post-transaction scriptlet: filesystem-0:3.18-8.fc40.x86_64 >>> Running post-transaction scriptlet: ca-certificates-0:2024.2.69_v8.0.401-1.0 >>> Stop post-transaction scriptlet: ca-certificates-0:2024.2.69_v8.0.401-1.0.fc >>> Running post-transaction scriptlet: authselect-libs-0:1.5.0-5.fc40.x86_64 >>> Stop post-transaction scriptlet: authselect-libs-0:1.5.0-5.fc40.x86_64 >>> Running post-transaction scriptlet: rpm-0:4.19.1.1-1.fc40.x86_64 >>> Stop post-transaction scriptlet: rpm-0:4.19.1.1-1.fc40.x86_64 >>> Running trigger-install scriptlet: glibc-common-0:2.39-22.fc40.x86_64 >>> Stop trigger-install scriptlet: glibc-common-0:2.39-22.fc40.x86_64 >>> Running trigger-install scriptlet: info-0:7.1-2.fc40.x86_64 >>> Stop trigger-install scriptlet: info-0:7.1-2.fc40.x86_64 Finish: installing minimal buildroot with dnf5 Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: alternatives-1.27-1.fc40.x86_64 ansible-srpm-macros-1-14.fc40.noarch audit-libs-4.0.2-1.fc40.x86_64 authselect-1.5.0-5.fc40.x86_64 authselect-libs-1.5.0-5.fc40.x86_64 basesystem-11-20.fc40.noarch bash-5.2.26-3.fc40.x86_64 binutils-2.41-37.fc40.x86_64 binutils-gold-2.41-37.fc40.x86_64 bzip2-1.0.8-18.fc40.x86_64 bzip2-libs-1.0.8-18.fc40.x86_64 ca-certificates-2024.2.69_v8.0.401-1.0.fc40.noarch coreutils-9.4-8.fc40.x86_64 coreutils-common-9.4-8.fc40.x86_64 cpio-2.15-1.fc40.x86_64 cracklib-2.9.11-5.fc40.x86_64 crypto-policies-20240725-1.git28d3e2d.fc40.noarch curl-8.6.0-10.fc40.x86_64 cyrus-sasl-lib-2.1.28-19.fc40.x86_64 debugedit-5.0-14.fc40.x86_64 diffutils-3.10-5.fc40.x86_64 dwz-0.15-6.fc40.x86_64 ed-1.20.2-1.fc40.x86_64 efi-srpm-macros-5-11.fc40.noarch elfutils-0.191-4.fc40.x86_64 elfutils-debuginfod-client-0.191-4.fc40.x86_64 elfutils-default-yama-scope-0.191-4.fc40.noarch elfutils-libelf-0.191-4.fc40.x86_64 elfutils-libs-0.191-4.fc40.x86_64 fedora-gpg-keys-40-2.noarch fedora-release-40-39.noarch fedora-release-common-40-39.noarch fedora-release-identity-basic-40-39.noarch fedora-repos-40-2.noarch file-5.45-4.fc40.x86_64 file-libs-5.45-4.fc40.x86_64 filesystem-3.18-8.fc40.x86_64 findutils-4.9.0-9.fc40.x86_64 fonts-srpm-macros-2.0.5-14.fc40.noarch forge-srpm-macros-0.3.2-1.fc40.noarch fpc-srpm-macros-1.3-12.fc40.noarch gawk-5.3.0-3.fc40.x86_64 gdb-minimal-15.1-1.fc40.x86_64 gdbm-1.23-6.fc40.x86_64 gdbm-libs-1.23-6.fc40.x86_64 ghc-srpm-macros-1.9-1.fc40.noarch glibc-2.39-22.fc40.x86_64 glibc-common-2.39-22.fc40.x86_64 glibc-gconv-extra-2.39-22.fc40.x86_64 glibc-minimal-langpack-2.39-22.fc40.x86_64 gmp-6.2.1-8.fc40.x86_64 gnat-srpm-macros-6-5.fc40.noarch go-srpm-macros-3.5.0-1.fc40.noarch gpg-pubkey-a15b79cc-63d04c2c grep-3.11-7.fc40.x86_64 gzip-1.13-1.fc40.x86_64 info-7.1-2.fc40.x86_64 jansson-2.13.1-9.fc40.x86_64 kernel-srpm-macros-1.0-23.fc40.noarch keyutils-libs-1.6.3-3.fc40.x86_64 krb5-libs-1.21.3-1.fc40.x86_64 libacl-2.3.2-1.fc40.x86_64 libarchive-3.7.2-4.fc40.x86_64 libattr-2.5.2-3.fc40.x86_64 libblkid-2.40.1-1.fc40.x86_64 libbrotli-1.1.0-3.fc40.x86_64 libcap-2.69-8.fc40.x86_64 libcap-ng-0.8.4-4.fc40.x86_64 libcom_err-1.47.0-5.fc40.x86_64 libcurl-8.6.0-10.fc40.x86_64 libeconf-0.6.2-2.fc40.x86_64 libevent-2.1.12-12.fc40.x86_64 libfdisk-2.40.1-1.fc40.x86_64 libffi-3.4.4-7.fc40.x86_64 libgcc-14.2.1-3.fc40.x86_64 libgomp-14.2.1-3.fc40.x86_64 libidn2-2.3.7-1.fc40.x86_64 libmount-2.40.1-1.fc40.x86_64 libnghttp2-1.59.0-3.fc40.x86_64 libnsl2-2.0.1-1.fc40.x86_64 libpkgconf-2.1.1-2.fc40.x86_64 libpsl-0.21.5-3.fc40.x86_64 libpwquality-1.4.5-9.fc40.x86_64 libselinux-3.7-5.fc40.x86_64 libsemanage-3.7-2.fc40.x86_64 libsepol-3.7-2.fc40.x86_64 libsmartcols-2.40.1-1.fc40.x86_64 libssh-0.10.6-5.fc40.x86_64 libssh-config-0.10.6-5.fc40.noarch libstdc++-14.2.1-3.fc40.x86_64 libtasn1-4.19.0-6.fc40.x86_64 libtirpc-1.3.5-0.fc40.x86_64 libtool-ltdl-2.4.7-10.fc40.x86_64 libunistring-1.1-7.fc40.x86_64 libutempter-1.2.1-13.fc40.x86_64 libuuid-2.40.1-1.fc40.x86_64 libverto-0.3.2-8.fc40.x86_64 libxcrypt-4.4.36-5.fc40.x86_64 libxml2-2.12.8-1.fc40.x86_64 libzstd-1.5.6-1.fc40.x86_64 lua-libs-5.4.6-5.fc40.x86_64 lua-srpm-macros-1-13.fc40.noarch lz4-libs-1.9.4-6.fc40.x86_64 mpfr-4.2.1-4.fc40.x86_64 ncurses-base-6.4-12.20240127.fc40.noarch ncurses-libs-6.4-12.20240127.fc40.x86_64 ocaml-srpm-macros-9-3.fc40.noarch openblas-srpm-macros-2-16.fc40.noarch openldap-2.6.7-1.fc40.x86_64 openssl-libs-3.2.2-3.fc40.x86_64 p11-kit-0.25.5-1.fc40.x86_64 p11-kit-trust-0.25.5-1.fc40.x86_64 package-notes-srpm-macros-0.5-11.fc40.noarch pam-1.6.1-3.fc40.x86_64 pam-libs-1.6.1-3.fc40.x86_64 patch-2.7.6-24.fc40.x86_64 pcre2-10.44-1.fc40.x86_64 pcre2-syntax-10.44-1.fc40.noarch perl-srpm-macros-1-53.fc40.noarch pkgconf-2.1.1-2.fc40.x86_64 pkgconf-m4-2.1.1-2.fc40.noarch pkgconf-pkg-config-2.1.1-2.fc40.x86_64 popt-1.19-6.fc40.x86_64 publicsuffix-list-dafsa-20240107-3.fc40.noarch pyproject-srpm-macros-1.15.0-1.fc40.noarch python-srpm-macros-3.12-8.fc40.noarch qt5-srpm-macros-5.15.15-1.fc40.noarch qt6-srpm-macros-6.7.2-2.fc40.noarch readline-8.2-8.fc40.x86_64 redhat-rpm-config-288-1.fc40.noarch rpm-4.19.1.1-1.fc40.x86_64 rpm-build-4.19.1.1-1.fc40.x86_64 rpm-build-libs-4.19.1.1-1.fc40.x86_64 rpm-libs-4.19.1.1-1.fc40.x86_64 rpm-sequoia-1.7.0-1.fc40.x86_64 rust-srpm-macros-26.3-1.fc40.noarch sed-4.9-1.fc40.x86_64 setup-2.14.5-2.fc40.noarch shadow-utils-4.15.1-3.fc40.x86_64 sqlite-libs-3.45.1-2.fc40.x86_64 systemd-libs-255.12-1.fc40.x86_64 tar-1.35-3.fc40.x86_64 unzip-6.0-63.fc40.x86_64 util-linux-2.40.1-1.fc40.x86_64 util-linux-core-2.40.1-1.fc40.x86_64 which-2.21-41.fc40.x86_64 xxhash-libs-0.8.2-2.fc40.x86_64 xz-5.4.6-3.fc40.x86_64 xz-libs-5.4.6-3.fc40.x86_64 zig-srpm-macros-1-2.fc40.noarch zip-3.0-40.fc40.x86_64 zlib-ng-compat-2.1.7-2.fc40.x86_64 zstd-1.5.6-1.fc40.x86_64 Start: buildsrpm Start: rpmbuild -bs warning: source_date_epoch_from_changelog set but %changelog is missing Building target platforms: x86_64 Building for target x86_64 Wrote: /builddir/build/SRPMS/R-CRAN-fdarep-0.1.1-1.fc40.copr8100731.src.rpm RPM build warnings: source_date_epoch_from_changelog set but %changelog is missing Finish: rpmbuild -bs cp: preserving permissions for ‘/var/lib/copr-rpmbuild/results/chroot_scan/var/lib/mock/fedora-40-x86_64-1727861822.563446/root/var/log’: No such file or directory INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-40-x86_64-1727861822.563446/root/var/log/dnf5.log Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-crnqoomp/R-CRAN-fdarep/R-CRAN-fdarep.spec) Config(child) 0 minutes 33 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/R-CRAN-fdarep-0.1.1-1.fc40.copr8100731.src.rpm) Config(fedora-40-x86_64) Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-40-x86_64-1727861822.563446/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management from host and used with --installroot: rpm-4.19.1.1-1.fc39.x86_64 rpm-sequoia-1.6.0-1.fc39.x86_64 python3-dnf-4.21.1-1.fc39.noarch python3-dnf-plugins-core-4.9.0-1.fc39.noarch yum-4.21.1-1.fc39.noarch dnf5-5.1.17-2.fc39.x86_64 dnf5-plugins-5.1.17-2.fc39.x86_64 Finish: chroot init Start: build phase for R-CRAN-fdarep-0.1.1-1.fc40.copr8100731.src.rpm Start: build setup for R-CRAN-fdarep-0.1.1-1.fc40.copr8100731.src.rpm warning: source_date_epoch_from_changelog set but %changelog is missing Building target platforms: x86_64 Building for target x86_64 Wrote: /builddir/build/SRPMS/R-CRAN-fdarep-0.1.1-1.fc40.copr8100731.src.rpm RPM build warnings: source_date_epoch_from_changelog set but %changelog is missing Updating and loading repositories: updates 100% | 917.8 KiB/s | 28.5 KiB | 00m00s fedora 100% | 988.8 KiB/s | 30.7 KiB | 00m00s Copr repository 100% | 37.5 KiB/s | 1.5 KiB | 00m00s Copr repository 100% | 34.6 MiB/s | 12.5 MiB | 00m00s Repositories loaded. Package Arch Version Repository Size Installing: R-CRAN-Hmisc x86_64 5.1.3-1.fc40.copr7501288 copr_base 5.2 MiB R-CRAN-MASS x86_64 7.3.61-1.fc40.copr7613806 copr_base 1.8 MiB R-CRAN-Matrix x86_64 1.7.0-1.fc40.copr7382390 copr_base 8.0 MiB R-CRAN-Rcpp x86_64 1.0.13-1.fc40.copr7745410 copr_base 8.4 MiB R-CRAN-RcppEigen x86_64 0.3.4.0.2-1.fc40.copr8100507 copr_base 9.0 MiB R-CRAN-fdapace x86_64 0.6.0-1.fc40.copr8100627 copr_base 2.3 MiB R-CRAN-numDeriv noarch 2016.8.1.1-3.fc40.copr7350037 copr_base 151.0 KiB R-CRAN-pracma noarch 2.4.4-1.fc40.copr7350224 copr_base 2.8 MiB R-core x86_64 4.4.1-5.fc40 updates 101.6 MiB R-devel x86_64 4.4.1-5.fc40 updates 0.0 B Installing dependencies: R-CRAN-Formula noarch 1.2.5-1.fc40.copr7350002 copr_base 205.4 KiB R-CRAN-R6 noarch 2.5.1-1.fc40.copr7349938 copr_base 115.9 KiB R-CRAN-RColorBrewer noarch 1.1.3-1.fc40.copr7349948 copr_base 63.6 KiB R-CRAN-backports x86_64 1.5.0-1.fc40.copr7483453 copr_base 211.8 KiB R-CRAN-base64enc x86_64 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java-21-openjdk-headless x86_64 1:21.0.4.0.7-2.fc40 updates 204.9 MiB javapackages-filesystem noarch 6.2.0-9.fc40 fedora 1.9 KiB jbigkit-libs x86_64 2.1-29.fc40 fedora 117.6 KiB kernel-headers x86_64 6.10.3-200.fc40 updates 6.3 MiB less x86_64 643-6.fc40 updates 372.6 KiB libICE x86_64 1.1.1-3.fc40 fedora 181.2 KiB libRmath x86_64 4.4.1-5.fc40 updates 246.8 KiB libRmath-devel x86_64 4.4.1-5.fc40 updates 17.4 KiB libSM x86_64 1.2.4-3.fc40 fedora 97.3 KiB libX11 x86_64 1.8.10-2.fc40 updates 1.3 MiB libX11-common noarch 1.8.10-2.fc40 updates 1.1 MiB libX11-devel x86_64 1.8.10-2.fc40 updates 1.0 MiB libX11-xcb x86_64 1.8.10-2.fc40 updates 15.0 KiB libXau x86_64 1.0.11-6.fc40 fedora 66.9 KiB libXau-devel x86_64 1.0.11-6.fc40 fedora 6.4 KiB libXcomposite x86_64 0.4.6-3.fc40 fedora 44.5 KiB libXext x86_64 1.3.6-1.fc40 fedora 90.1 KiB libXext-devel x86_64 1.3.6-1.fc40 fedora 98.9 KiB libXft x86_64 2.3.8-6.fc40 fedora 164.5 KiB libXft-devel x86_64 2.3.8-6.fc40 fedora 31.7 KiB libXi x86_64 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x86_64 2:1.6.40-3.fc40 fedora 881.5 KiB libquadmath x86_64 14.2.1-3.fc40 updates 325.9 KiB libquadmath-devel x86_64 14.2.1-3.fc40 updates 21.9 KiB libselinux-devel x86_64 3.7-5.fc40 updates 126.4 KiB libsepol-devel x86_64 3.7-2.fc40 updates 120.3 KiB libstdc++-devel x86_64 14.2.1-3.fc40 updates 15.4 MiB libtextstyle x86_64 0.22.5-4.fc40 updates 195.6 KiB libthai x86_64 0.1.29-8.fc40 fedora 783.5 KiB libtiff x86_64 4.6.0-2.fc40 fedora 1.1 MiB libtirpc-devel x86_64 1.3.5-0.fc40 updates 251.6 KiB libwebp x86_64 1.3.2-5.fc40 fedora 793.6 KiB libxcb x86_64 1.17.0-1.fc40 updates 1.1 MiB libxcb-devel x86_64 1.17.0-1.fc40 updates 2.7 MiB libxcrypt-devel x86_64 4.4.36-5.fc40 fedora 30.3 KiB libxml2-devel x86_64 2.12.8-1.fc40 updates 3.4 MiB lksctp-tools x86_64 1.0.19-6.fc40 fedora 269.6 KiB lua x86_64 5.4.6-5.fc40 fedora 597.8 KiB lua-posix x86_64 36.2.1-6.fc40 fedora 599.7 KiB make x86_64 1:4.4.1-6.fc40 fedora 1.8 MiB mkfontscale x86_64 1.2.2-6.fc40 fedora 49.2 KiB mpdecimal x86_64 2.5.1-9.fc40 fedora 200.9 KiB nettle x86_64 3.9.1-6.fc40 fedora 790.1 KiB nspr x86_64 4.35.0-29.fc40 updates 316.4 KiB nss x86_64 3.104.0-1.fc40 updates 1.9 MiB nss-softokn x86_64 3.104.0-1.fc40 updates 1.9 MiB nss-softokn-freebl x86_64 3.104.0-1.fc40 updates 803.7 KiB nss-sysinit x86_64 3.104.0-1.fc40 updates 18.2 KiB nss-util x86_64 3.104.0-1.fc40 updates 230.2 KiB openblas x86_64 0.3.26-4.fc40 fedora 96.0 KiB openblas-openmp x86_64 0.3.26-4.fc40 fedora 38.9 MiB openblas-openmp64 x86_64 0.3.26-4.fc40 fedora 39.1 MiB pango x86_64 1.54.0-1.fc40 updates 996.2 KiB pcre2-devel x86_64 10.44-1.fc40 updates 2.0 MiB pcre2-utf16 x86_64 10.44-1.fc40 updates 590.0 KiB pcre2-utf32 x86_64 10.44-1.fc40 updates 562.0 KiB pixman x86_64 0.43.4-1.fc40 updates 710.1 KiB pixman-devel x86_64 0.43.4-1.fc40 updates 49.4 KiB python-pip-wheel noarch 23.3.2-1.fc40 fedora 1.5 MiB python3 x86_64 3.12.6-1.fc40 updates 31.5 KiB python3-libs x86_64 3.12.6-1.fc40 updates 41.3 MiB python3-packaging noarch 23.2-4.fc40 fedora 421.1 KiB sysprof-capture-devel x86_64 46.0-1.fc40 fedora 252.8 KiB tcl x86_64 1:8.6.13-2.fc40 fedora 4.2 MiB tcl-devel x86_64 1:8.6.13-2.fc40 fedora 809.0 KiB tk x86_64 1:8.6.13-3.fc40 fedora 3.6 MiB tk-devel x86_64 1:8.6.13-3.fc40 fedora 983.9 KiB tre x86_64 0.8.0-43.20140228gitc2f5d13.fc40 fedora 75.9 KiB tre-common noarch 0.8.0-43.20140228gitc2f5d13.fc40 fedora 81.0 KiB tre-devel x86_64 0.8.0-43.20140228gitc2f5d13.fc40 fedora 10.7 KiB ttmkfdir x86_64 3.0.9-70.fc40 fedora 122.7 KiB tzdata noarch 2024a-5.fc40 updates 1.6 MiB tzdata-java noarch 2024a-5.fc40 updates 101.7 KiB xdg-utils noarch 1.2.1-1.fc40 fedora 346.3 KiB xml-common noarch 0.6.3-63.fc40 fedora 78.4 KiB xorg-x11-fonts-Type1 noarch 7.5-38.fc40 fedora 863.3 KiB xorg-x11-proto-devel noarch 2024.1-2.fc40 updates 1.7 MiB xz-devel x86_64 1:5.4.6-3.fc40 fedora 255.8 KiB zlib-ng-compat-devel x86_64 2.1.7-2.fc40 updates 106.8 KiB Transaction Summary: Installing: 232 packages Total size of inbound packages is 349 MiB. Need to download 349 MiB. After this operation 1 GiB will be used (install 1 GiB, remove 0 B). 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00m00s [233/234] Installing gcc-plugin-annobin 100% | 1.4 MiB/s | 58.6 KiB | 00m00s >>> Running trigger-install scriptlet: redhat-rpm-config-0:288-1.fc40.noarch >>> Stop trigger-install scriptlet: redhat-rpm-config-0:288-1.fc40.noarch [234/234] Installing annobin-plugin-gcc 100% | 848.1 KiB/s | 977.9 KiB | 00m01s >>> Running trigger-install scriptlet: redhat-rpm-config-0:288-1.fc40.noarch >>> Stop trigger-install scriptlet: redhat-rpm-config-0:288-1.fc40.noarch >>> Running post-transaction scriptlet: crypto-policies-scripts-0:20240725-1.git >>> Stop post-transaction scriptlet: crypto-policies-scripts-0:20240725-1.git28d >>> Running post-transaction scriptlet: nss-0:3.104.0-1.fc40.x86_64 >>> Stop post-transaction scriptlet: nss-0:3.104.0-1.fc40.x86_64 >>> Running post-transaction scriptlet: copy-jdk-configs-0:4.1-5.fc40.noarch >>> Stop post-transaction scriptlet: copy-jdk-configs-0:4.1-5.fc40.noarch >>> Running post-transaction scriptlet: java-21-openjdk-headless-1:21.0.4.0.7-2. >>> 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Finish: build setup for R-CRAN-fdarep-0.1.1-1.fc40.copr8100731.src.rpm Start: rpmbuild R-CRAN-fdarep-0.1.1-1.fc40.copr8100731.src.rpm warning: source_date_epoch_from_changelog set but %changelog is missing Building target platforms: x86_64 Building for target x86_64 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.l6gv77 + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf fdarep + /usr/bin/mkdir -p fdarep + cd fdarep + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/fdarep_0.1.1.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + rm -rf /builddir/build/BUILD/fdarep-SPECPARTS + /usr/bin/mkdir -p /builddir/build/BUILD/fdarep-SPECPARTS + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + find -type f -executable -exec grep -Iq . '{}' ';' -exec sed -i -e '$a\' '{}' ';' + '[' -d fdarep/src ']' + find fdarep/src -type f -exec sed -i s@/usr/bin/strip@/usr/bin/true@g '{}' ';' + '[' -d fdarep/src ']' + find 'fdarep/src/Make*' -type f -exec sed -i s@-g0@@g '{}' ';' find: ‘fdarep/src/Make*’: No such file or directory + true + find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' '{}' ';' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.iVxQUL + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd fdarep + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.2aCVVc + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/R-CRAN-fdarep-0.1.1-1.fc40.copr8100731.x86_64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/R-CRAN-fdarep-0.1.1-1.fc40.copr8100731.x86_64 ++ dirname /builddir/build/BUILDROOT/R-CRAN-fdarep-0.1.1-1.fc40.copr8100731.x86_64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/R-CRAN-fdarep-0.1.1-1.fc40.copr8100731.x86_64 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd fdarep + mkdir -p /builddir/build/BUILDROOT/R-CRAN-fdarep-0.1.1-1.fc40.copr8100731.x86_64/usr/local/lib/R/library + /usr/bin/R CMD INSTALL -l /builddir/build/BUILDROOT/R-CRAN-fdarep-0.1.1-1.fc40.copr8100731.x86_64/usr/local/lib/R/library fdarep * installing *source* package ‘fdarep’ ... ** package ‘fdarep’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++ (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3)’ g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppEigen/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c GetIndCEScoresCPP.cpp -o GetIndCEScoresCPP.o In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:205, from /usr/local/lib/R/library/RcppEigen/include/Eigen/Dense:1, from /usr/local/lib/R/library/RcppEigen/include/RcppEigenForward.h:28, from /usr/local/lib/R/library/RcppEigen/include/RcppEigen.h:25, from GetIndCEScoresCPP.cpp:2: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes] 49 | template<> struct is_arithmetic<__m128> { enum { value = true }; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes] 51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 222 | template<> struct unpacket_traits { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 228 | template<> struct unpacket_traits { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 1124 | ptranspose(PacketBlock& kernel) { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 1129 | ptranspose(PacketBlock& kernel) { | ^ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:174: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:165: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46: required from here 24 | ResAlignment = traits >::Alignment | ^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:271: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3: required from here 27 | { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47: required from here 98 | ResAlignment = traits >::Alignment | ^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3: required from here 102 | { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/SparseCore:37, from /usr/local/lib/R/library/RcppEigen/include/Eigen/Sparse:26, from /usr/local/lib/R/library/RcppEigen/include/RcppEigenForward.h:29: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase >’ 36 | class SparseCompressedBase | ^~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from ‘class Eigen::SparseMatrix’ 96 | class SparseMatrix | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here 61 | typedef Triplet T; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Map.h:18:8: required from ‘struct Eigen::internal::traits > >’ 18 | struct traits > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:32:48: required from ‘struct Eigen::internal::accessors_level > >’ 32 | enum { has_direct_access = (traits::Flags & DirectAccessBit) ? 1 : 0, | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:111:75: required from ‘class Eigen::Map >’ 111 | int Level = internal::accessors_level::has_write_access ? WriteAccessors : ReadOnlyAccessors | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPP.cpp:15:40: required from here 15 | const unsigned int lenlamVec = lamVec.size(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Map.h:24:49: required from ‘struct Eigen::internal::traits > >’ 24 | ? PlainObjectType::ColsAtCompileTime | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:32:48: required from ‘struct Eigen::internal::accessors_level > >’ 32 | enum { has_direct_access = (traits::Flags & DirectAccessBit) ? 1 : 0, | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:111:75: required from ‘class Eigen::Map >’ 111 | int Level = internal::accessors_level::has_write_access ? WriteAccessors : ReadOnlyAccessors | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPP.cpp:15:40: required from here 15 | const unsigned int lenlamVec = lamVec.size(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase >, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase >, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase >, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: required from ‘class Eigen::MapBase >, 1>’ 223 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map >’ 94 | template class Map | ^~~ GetIndCEScoresCPP.cpp:15:40: required from here 15 | const unsigned int lenlamVec = lamVec.size(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ GetIndCEScoresCPP.cpp:17:19: required from here 17 | Eigen::MatrixXd xiVar = Eigen::MatrixXd::Constant(lenlamVec,lenlamVec,std::numeric_limits::quiet_NaN()); | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::Matrix > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, Eigen::Matrix > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp, Eigen::Matrix >’ 60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp >::type, internal::no_assignment_operator | ^~~~~~~~~~~~~~ GetIndCEScoresCPP.cpp:17:52: required from here 17 | Eigen::MatrixXd xiVar = Eigen::MatrixXd::Constant(lenlamVec,lenlamVec,std::numeric_limits::quiet_NaN()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase >, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase >, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase >, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: required from ‘class Eigen::MapBase >, 1>’ 223 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map >’ 94 | template class Map | ^~~ GetIndCEScoresCPP.cpp:21:56: required from here 21 | Eigen::MatrixXd LamPhi = lamVec.asDiagonal() * phiMat.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase > >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase > >, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase > > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase > > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl >, Eigen::Dense>’ 118 | template class TransposeImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose > >’ 52 | template class Transpose | ^~~~~~~~~ GetIndCEScoresCPP.cpp:21:66: required from here 21 | Eigen::MatrixXd LamPhi = lamVec.asDiagonal() * phiMat.transpose(); | ~~~~~~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase > >, Eigen::Transpose > >, 1>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase > >, Eigen::Transpose > >, 1> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase > >, Eigen::Transpose > >, 1> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base > >, Eigen::Transpose > >, 1, 8>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl > >, Eigen::Transpose > >, 1, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product > >, Eigen::Transpose > >, 1>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ GetIndCEScoresCPP.cpp:21:67: required from here 21 | Eigen::MatrixXd LamPhi = lamVec.asDiagonal() * phiMat.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Map >, const Eigen::Map > >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Map >, const Eigen::Map > > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Map >, const Eigen::Map > > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Map >, const Eigen::Map >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ GetIndCEScoresCPP.cpp:23:46: required from here 23 | xiEst = LamPhi * ldlt_SigmaYi.solve(yVec - muVec) ; // LamPhiSig * (yVec - muVec); | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:86:7: required from ‘class Eigen::SolveImpl, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > >, Eigen::Dense>’ 86 | class SolveImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:62:7: required from ‘class Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >’ 62 | class Solve : public SolveImpl::StorageKind> | ^~~~~ GetIndCEScoresCPP.cpp:23:38: required from here 23 | xiEst = LamPhi * ldlt_SigmaYi.solve(yVec - muVec) ; // LamPhiSig * (yVec - muVec); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0, 7>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ GetIndCEScoresCPP.cpp:23:51: required from here 23 | xiEst = LamPhi * ldlt_SigmaYi.solve(yVec - muVec) ; // LamPhiSig * (yVec - muVec); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Matrix > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Matrix > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl, const Eigen::Matrix, Eigen::Dense>’ 94 | class CwiseUnaryOpImpl | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp, const Eigen::Matrix >’ 55 | class CwiseUnaryOp : public CwiseUnaryOpImpl::StorageKind>, internal::no_assignment_operator | ^~~~~~~~~~~~ GetIndCEScoresCPP.cpp:24:12: required from here 24 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase >, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase >, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl, Eigen::Dense>’ 118 | template class TransposeImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose >’ 52 | template class Transpose | ^~~~~~~~~ GetIndCEScoresCPP.cpp:24:56: required from here 24 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ~~~~~~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:32:48: required from ‘struct Eigen::internal::accessors_level, 1>, Eigen::Transpose > > >’ 32 | enum { has_direct_access = (traits::Flags & DirectAccessBit) ? 1 : 0, | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 1>, Eigen::Transpose > > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1>, Eigen::Transpose > > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:86:7: required from ‘class Eigen::SolveImpl, 1>, Eigen::Transpose >, Eigen::Dense>’ 86 | class SolveImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:62:7: required from ‘class Eigen::Solve, 1>, Eigen::Transpose > >’ 62 | class Solve : public SolveImpl::StorageKind> | ^~~~~ GetIndCEScoresCPP.cpp:24:39: required from here 24 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 1>, Eigen::Transpose > >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 1>, Eigen::Transpose > > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1>, Eigen::Transpose > > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:86:7: required from ‘class Eigen::SolveImpl, 1>, Eigen::Transpose >, Eigen::Dense>’ 86 | class SolveImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:62:7: required from ‘class Eigen::Solve, 1>, Eigen::Transpose > >’ 62 | class Solve : public SolveImpl::StorageKind> | ^~~~~ GetIndCEScoresCPP.cpp:24:39: required from here 24 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0, 8>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ GetIndCEScoresCPP.cpp:24:58: required from here 24 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 0>, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 0>, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Diagonal.h:63:53: required from ‘class Eigen::Diagonal, 0>’ 63 | template class Diagonal | ^~~~~~~~ GetIndCEScoresCPP.cpp:26:17: required from here 26 | xiVar.diagonal() += lamVec; | ~~~~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase >, Eigen::Matrix, 0>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >, Eigen::Matrix, 0> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >, Eigen::Matrix, 0> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base >, Eigen::Matrix, 0, 8>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl >, Eigen::Matrix, 0, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product >, Eigen::Matrix, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ GetIndCEScoresCPP.cpp:27:30: required from here 27 | fittedY = muVec + phiMat * xiEst; | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0>, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ GetIndCEScoresCPP.cpp:27:30: required from here 27 | fittedY = muVec + phiMat * xiEst; | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, true>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, true>, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, true>, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, true> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, 1, true> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, -1, 1, true, true>’ 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from ‘class Eigen::BlockImpl, -1, 1, true, Eigen::Dense>’ 154 | class BlockImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block, -1, 1, true>’ 103 | template class Block | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:514:33: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 514 | abs_col_sum = m_matrix.col(col).tail(size - col).template lpNorm<1>() + m_matrix.row(col).head(col).template lpNorm<1>(); | ~~~~~~~~~~~~^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPP.cpp:22:52: required from here 22 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, false>, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, false>, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, true>, -1, 1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, 1, true>, -1, 1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, 1, true>, -1, 1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from ‘class Eigen::BlockImpl, -1, 1, true>, -1, 1, false, Eigen::Dense>’ 154 | class BlockImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block, -1, 1, true>, -1, 1, false>’ 103 | template class Block | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/VectorBlock.h:56:47: required from ‘class Eigen::VectorBlock, -1, 1, true>, -1>’ 56 | template class VectorBlock | ^~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:514:43: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 514 | abs_col_sum = m_matrix.col(col).tail(size - col).template lpNorm<1>() + m_matrix.row(col).head(col).template lpNorm<1>(); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPP.cpp:22:52: required from here 22 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 1, -1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1, -1, false>, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 1, -1, false>, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 1, -1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1, -1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, 1, -1, false, true>’ 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from ‘class Eigen::BlockImpl, 1, -1, false, Eigen::Dense>’ 154 | class BlockImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block, 1, -1, false>’ 103 | template class Block | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:514:91: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 514 | abs_col_sum = m_matrix.col(col).tail(size - col).template lpNorm<1>() + m_matrix.row(col).head(col).template lpNorm<1>(); | ~~~~~~~~~~~~^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPP.cpp:22:52: required from here 22 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 1, -1, false>, 1, -1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1, -1, false>, 1, -1, false>, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 1, -1, false>, 1, -1, false>, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 1, -1, false>, 1, -1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1, -1, false>, 1, -1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 1, -1, false>, 1, -1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from ‘class Eigen::BlockImpl, 1, -1, false>, 1, -1, false, Eigen::Dense>’ 154 | class BlockImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block, 1, -1, false>, 1, -1, false>’ 103 | template class Block | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/VectorBlock.h:56:47: required from ‘class Eigen::VectorBlock, 1, -1, false>, -1>’ 56 | template class VectorBlock | ^~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:514:101: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 514 | abs_col_sum = m_matrix.col(col).tail(size - col).template lpNorm<1>() + m_matrix.row(col).head(col).template lpNorm<1>(); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPP.cpp:22:52: required from here 22 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>, -1, 1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 0>, -1, 1, false>, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 0>, -1, 1, false>, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0>, -1, 1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0>, -1, 1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0>, -1, 1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block, 0>, -1, 1, false>’ 103 | template class Block | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/VectorBlock.h:56:47: required from ‘class Eigen::VectorBlock, 0>, -1>’ 56 | template class VectorBlock | ^~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:325:26: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 325 | mat.diagonal().tail(size-k).cwiseAbs().maxCoeff(&index_of_biggest_in_corner); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 526 | m_info = internal::ldlt_inplace::unblocked(m_matrix, m_transpositions, m_temporary, m_sign) ? Success : NumericalIssue; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPP.cpp:22:52: required from here 22 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Block, 0>, -1, 1, false> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Block, 0>, -1, 1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Block, 0>, -1, 1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl, const Eigen::Block, 0>, -1, 1, false>, Eigen::Dense>’ 94 | class CwiseUnaryOpImpl | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp, const Eigen::Block, 0>, -1, 1, false> >’ 55 | class CwiseUnaryOp : public CwiseUnaryOpImpl::StorageKind>, internal::no_assignment_operator | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:325:43: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 325 | mat.diagonal().tail(size-k).cwiseAbs().maxCoeff(&index_of_biggest_in_corner); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 526 | m_info = internal::ldlt_inplace::unblocked(m_matrix, m_transpositions, m_temporary, m_sign) ? Success : NumericalIssue; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPP.cpp:22:52: required from here 22 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, false>, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, false>, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, 1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, 1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from ‘class Eigen::BlockImpl, -1, 1, false, Eigen::Dense>’ 154 | class BlockImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block, -1, 1, false>’ 103 | template class Block | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:352:35: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 352 | Block A21(mat,k+1,k,rs,1); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 526 | m_info = internal::ldlt_inplace::unblocked(m_matrix, m_transpositions, m_temporary, m_sign) ? Success : NumericalIssue; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPP.cpp:22:52: required from here 22 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, -1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, -1, -1, false>, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, -1, -1, false>, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, -1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, -1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, -1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from ‘class Eigen::BlockImpl, -1, -1, false, Eigen::Dense>’ 154 | class BlockImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block, -1, -1, false>’ 103 | template class Block | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:354:41: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 354 | Block A20(mat,k+1,0,rs,k); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 526 | m_info = internal::ldlt_inplace::unblocked(m_matrix, m_transpositions, m_temporary, m_sign) ? Success : NumericalIssue; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPP.cpp:22:52: required from here 22 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, false>, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, false>, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, 1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, 1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block, -1, 1, false>’ 103 | template class Block | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/VectorBlock.h:56:47: required from ‘class Eigen::VectorBlock, -1>’ 56 | template class VectorBlock | ^~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:358:18: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 358 | temp.head(k) = mat.diagonal().real().head(k).asDiagonal() * A10.adjoint(); | ~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 526 | m_info = internal::ldlt_inplace::unblocked(m_matrix, m_transpositions, m_temporary, m_sign) ? Success : NumericalIssue; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPP.cpp:22:52: required from here 22 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 1, -1, false> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, 1, -1, false> >, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 1, -1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1, -1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl, 1, -1, false>, Eigen::Dense>’ 118 | template class TransposeImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose, 1, -1, false> >’ 52 | template class Transpose | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:358:80: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 358 | temp.head(k) = mat.diagonal().real().head(k).asDiagonal() * A10.adjoint(); | ~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 526 | m_info = internal::ldlt_inplace::unblocked(m_matrix, m_transpositions, m_temporary, m_sign) ? Success : NumericalIssue; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPP.cpp:22:52: required from here 22 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>, -1, 1, false> >, Eigen::Transpose, 1, -1, false> >, 1>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0>, -1, 1, false> >, Eigen::Transpose, 1, -1, false> >, 1> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0>, -1, 1, false> >, Eigen::Transpose, 1, -1, false> >, 1> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base, 0>, -1, 1, false> >, Eigen::Transpose, 1, -1, false> >, 1, 7>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl, 0>, -1, 1, false> >, Eigen::Transpose, 1, -1, false> >, 1, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, 0>, -1, 1, false> >, Eigen::Transpose, 1, -1, false> >, 1>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:358:67: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 358 | temp.head(k) = mat.diagonal().real().head(k).asDiagonal() * A10.adjoint(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 526 | m_info = internal::ldlt_inplace::unblocked(m_matrix, m_transpositions, m_temporary, m_sign) ? Success : NumericalIssue; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPP.cpp:22:52: required from here 22 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 1, -1, false>, Eigen::Block, -1, 1, false>, 0>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 1, -1, false>, Eigen::Block, -1, 1, false>, 0> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1, -1, false>, Eigen::Block, -1, 1, false>, 0> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:126:7: required from ‘class Eigen::internal::dense_product_base, 1, -1, false>, Eigen::Block, -1, 1, false>, 0, 6>’ 126 | class dense_product_base | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl, 1, -1, false>, Eigen::Block, -1, 1, false>, 0, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, 1, -1, false>, Eigen::Block, -1, 1, false>, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:359:35: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 359 | mat.coeffRef(k,k) -= (A10 * temp.head(k)).value(); | ~~~~~^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 526 | m_info = internal::ldlt_inplace::unblocked(m_matrix, m_transpositions, m_temporary, m_sign) ? Success : NumericalIssue; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPP.cpp:22:52: required from here 22 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:179:81: required from ‘class Eigen::DenseBase, 1, -1, false>, Eigen::Block, -1, 1, false>, 0> >’ 179 | typedef typename internal::find_best_packet::type PacketScalar; | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1, -1, false>, Eigen::Block, -1, 1, false>, 0> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:126:7: required from ‘class Eigen::internal::dense_product_base, 1, -1, false>, Eigen::Block, -1, 1, false>, 0, 6>’ 126 | class dense_product_base | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl, 1, -1, false>, Eigen::Block, -1, 1, false>, 0, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, 1, -1, false>, Eigen::Block, -1, 1, false>, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:359:35: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 359 | mat.coeffRef(k,k) -= (A10 * temp.head(k)).value(); | ~~~~~^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 526 | m_info = internal::ldlt_inplace::unblocked(m_matrix, m_transpositions, m_temporary, m_sign) ? Success : NumericalIssue; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPP.cpp:22:52: required from here 22 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, -1, false>, Eigen::Block, -1, 1, false>, 0> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, -1, false>, Eigen::Block, -1, 1, false>, 0> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base, -1, -1, false>, Eigen::Block, -1, 1, false>, 0, 7>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl, -1, -1, false>, Eigen::Block, -1, 1, false>, 0, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:361:32: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 361 | A21.noalias() -= A20 * temp.head(k); | ~~~~^~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 526 | m_info = internal::ldlt_inplace::unblocked(m_matrix, m_transpositions, m_temporary, m_sign) ? Success : NumericalIssue; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPP.cpp:22:52: required from here 22 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, false> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, false> >, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, false> >, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, true>, -1, 1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase, -1, 1, true>, -1, 1, false> > >’ 39 | template class ArrayBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from ‘class Eigen::ArrayWrapper, -1, 1, true>, -1, 1, false> >’ 42 | class ArrayWrapper : public ArrayBase > | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:379:56: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 379 | ret = ret && (mat.col(j).tail(size-j-1).array()==Scalar(0)).all(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 526 | m_info = internal::ldlt_inplace::unblocked(m_matrix, m_transpositions, m_temporary, m_sign) ? Success : NumericalIssue; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPP.cpp:22:52: required from here 22 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::Array >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::Array > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase, Eigen::Array > >’ 39 | template class ArrayBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp, Eigen::Array >’ 60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp >::type, internal::no_assignment_operator | ^~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28: required from ‘struct Eigen::internal::traits, const Eigen::ArrayWrapper, -1, 1, true>, -1, 1, false> >, const Eigen::CwiseNullaryOp, Eigen::Array > > >’ 38 | >::type Scalar; | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::ArrayWrapper, -1, 1, true>, -1, 1, false> >, const Eigen::CwiseNullaryOp, Eigen::Array >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, -1, 1, true>, -1, 1, false> >, const Eigen::CwiseNullaryOp, Eigen::Array > >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:379:58: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 379 | ret = ret && (mat.col(j).tail(size-j-1).array()==Scalar(0)).all(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 526 | m_info = internal::ldlt_inplace::unblocked(m_matrix, m_transpositions, m_temporary, m_sign) ? Success : NumericalIssue; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPP.cpp:22:52: required from here 22 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, false> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, false> >, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, false> >, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase, -1, 1, false> > >’ 39 | template class ArrayBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from ‘class Eigen::ArrayWrapper, -1, 1, false> >’ 42 | class ArrayWrapper : public ArrayBase > | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:387:32: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 387 | ret = ret && (A21.array()==Scalar(0)).all(); | ~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 526 | m_info = internal::ldlt_inplace::unblocked(m_matrix, m_transpositions, m_temporary, m_sign) ? Success : NumericalIssue; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPP.cpp:22:52: required from here 22 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Block, -1, 1, true>, -1, 1, false> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Block, -1, 1, true>, -1, 1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Block, -1, 1, true>, -1, 1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl, const Eigen::Block, -1, 1, true>, -1, 1, false>, Eigen::Dense>’ 94 | class CwiseUnaryOpImpl | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true>, -1, 1, false> >’ 55 | class CwiseUnaryOp : public CwiseUnaryOpImpl::StorageKind>, internal::no_assignment_operator | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:221:22: required from ‘static typename Eigen::NumTraits::Scalar>::Real Eigen::internal::lpNorm_selector::run(const Eigen::MatrixBase&) [with Derived = Eigen::Block, -1, 1, true>, -1, 1, false>; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]’ 221 | return m.cwiseAbs().sum(); | ~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:269:52: required from ‘typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::lpNorm() const [with int p = 1; Derived = Eigen::Block, -1, 1, true>, -1, 1, false>; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]’ 269 | return internal::lpNorm_selector::run(*this); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:514:74: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 514 | abs_col_sum = m_matrix.col(col).tail(size - col).template lpNorm<1>() + m_matrix.row(col).head(col).template lpNorm<1>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPP.cpp:22:52: required from here 22 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Block, 1, -1, false>, 1, -1, false> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Block, 1, -1, false>, 1, -1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Block, 1, -1, false>, 1, -1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl, const Eigen::Block, 1, -1, false>, 1, -1, false>, Eigen::Dense>’ 94 | class CwiseUnaryOpImpl | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp, const Eigen::Block, 1, -1, false>, 1, -1, false> >’ 55 | class CwiseUnaryOp : public CwiseUnaryOpImpl::StorageKind>, internal::no_assignment_operator | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:221:22: required from ‘static typename Eigen::NumTraits::Scalar>::Real Eigen::internal::lpNorm_selector::run(const Eigen::MatrixBase&) [with Derived = Eigen::Block, 1, -1, false>, 1, -1, false>; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]’ 221 | return m.cwiseAbs().sum(); | ~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:269:52: required from ‘typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::lpNorm() const [with int p = 1; Derived = Eigen::Block, 1, -1, false>, 1, -1, false>; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]’ 269 | return internal::lpNorm_selector::run(*this); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:514:125: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 514 | abs_col_sum = m_matrix.col(col).tail(size - col).template lpNorm<1>() + m_matrix.row(col).head(col).template lpNorm<1>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPP.cpp:22:52: required from here 22 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase >’ 39 | template class ArrayBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array’ 45 | class Array | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/../plugins/ArrayCwiseBinaryOps.h:219:1: required from ‘const Eigen::ArrayBase::CmpEQReturnType Eigen::ArrayBase::operator==(const Scalar&) const [with Derived = Eigen::ArrayWrapper, -1, 1, true>, -1, 1, false> >; CmpEQReturnType = Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, -1, 1, true>, -1, 1, false> >, const Eigen::CwiseNullaryOp, Eigen::Array > >; Scalar = double]’ 145 | return this->OP(Derived::PlainObject::Constant(rows(), cols(), s)); \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:379:58: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 379 | ret = ret && (mat.col(j).tail(size-j-1).array()==Scalar(0)).all(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 526 | m_info = internal::ldlt_inplace::unblocked(m_matrix, m_transpositions, m_temporary, m_sign) ? Success : NumericalIssue; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPP.cpp:22:52: required from here 22 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:277: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, 1, true> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1043:41: required from ‘struct Eigen::internal::evaluator, -1, 1, true>, -1, 1, false> >’ 1043 | CoeffReadCost = evaluator::CoeffReadCost, | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1384:41: required from ‘struct Eigen::internal::evaluator_wrapper_base, -1, 1, true>, -1, 1, false> > >’ 1384 | CoeffReadCost = evaluator::CoeffReadCost, | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1464:8: required from ‘struct Eigen::internal::unary_evaluator, -1, 1, true>, -1, 1, false> >, Eigen::internal::IndexBased, double>’ 1464 | struct unary_evaluator > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator, -1, 1, true>, -1, 1, false> > >’ 90 | struct evaluator : public unary_evaluator | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8: required from ‘struct Eigen::internal::evaluator, const Eigen::ArrayWrapper, -1, 1, true>, -1, 1, false> >, const Eigen::CwiseNullaryOp, Eigen::Array > > >’ 722 | struct evaluator > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/BooleanRedux.h:84:50: required from ‘bool Eigen::DenseBase::all() const [with Derived = Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, -1, 1, true>, -1, 1, false> >, const Eigen::CwiseNullaryOp, Eigen::Array > >]’ 84 | && SizeAtCompileTime * (int(Evaluator::CoeffReadCost) + int(NumTraits::AddCost)) <= EIGEN_UNROLLING_LIMIT | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:379:74: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 379 | ret = ret && (mat.col(j).tail(size-j-1).array()==Scalar(0)).all(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 526 | m_info = internal::ldlt_inplace::unblocked(m_matrix, m_transpositions, m_temporary, m_sign) ? Success : NumericalIssue; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPP.cpp:22:52: required from here 22 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, 1, true>, -1, 1, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1384:41: required from ‘struct Eigen::internal::evaluator_wrapper_base, -1, 1, true>, -1, 1, false> > >’ 1384 | CoeffReadCost = evaluator::CoeffReadCost, | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1464:8: required from ‘struct Eigen::internal::unary_evaluator, -1, 1, true>, -1, 1, false> >, Eigen::internal::IndexBased, double>’ 1464 | struct unary_evaluator > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator, -1, 1, true>, -1, 1, false> > >’ 90 | struct evaluator : public unary_evaluator | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, -1, 1, true>, -1, 1, false> > >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:41: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::ArrayWrapper, -1, 1, true>, -1, 1, false> >, const Eigen::CwiseNullaryOp, Eigen::Array > >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ 739 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8: required from ‘struct Eigen::internal::evaluator, const Eigen::ArrayWrapper, -1, 1, true>, -1, 1, false> >, const Eigen::CwiseNullaryOp, Eigen::Array > > >’ 722 | struct evaluator > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/BooleanRedux.h:84:50: required from ‘bool Eigen::DenseBase::all() const [with Derived = Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, -1, 1, true>, -1, 1, false> >, const Eigen::CwiseNullaryOp, Eigen::Array > >]’ 84 | && SizeAtCompileTime * (int(Evaluator::CoeffReadCost) + int(NumTraits::AddCost)) <= EIGEN_UNROLLING_LIMIT | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:379:74: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 379 | ret = ret && (mat.col(j).tail(size-j-1).array()==Scalar(0)).all(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 526 | m_info = internal::ldlt_inplace::unblocked(m_matrix, m_transpositions, m_temporary, m_sign) ? Success : NumericalIssue; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPP.cpp:22:52: required from here 22 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::Matrix > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, Eigen::Matrix > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp, Eigen::Matrix >’ 60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp >::type, internal::no_assignment_operator | ^~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/SelfCwiseBinaryOp.h:41:67: required from ‘Derived& Eigen::DenseBase::operator/=(const Scalar&) [with Derived = Eigen::Block, -1, 1, false>; Scalar = double]’ 41 | internal::call_assignment(this->derived(), PlainObject::Constant(rows(),cols(),other), internal::div_assign_op()); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:385:13: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 385 | A21 /= realAkk; | ~~~~^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 526 | m_info = internal::ldlt_inplace::unblocked(m_matrix, m_transpositions, m_temporary, m_sign) ? Success : NumericalIssue; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPP.cpp:22:52: required from here 22 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, 1, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1384:41: required from ‘struct Eigen::internal::evaluator_wrapper_base, -1, 1, false> > >’ 1384 | CoeffReadCost = evaluator::CoeffReadCost, | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1464:8: required from ‘struct Eigen::internal::unary_evaluator, -1, 1, false> >, Eigen::internal::IndexBased, double>’ 1464 | struct unary_evaluator > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator, -1, 1, false> > >’ 90 | struct evaluator : public unary_evaluator | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, -1, 1, false> > >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:41: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::ArrayWrapper, -1, 1, false> >, const Eigen::CwiseNullaryOp, Eigen::Array > >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ 739 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8: required from ‘struct Eigen::internal::evaluator, const Eigen::ArrayWrapper, -1, 1, false> >, const Eigen::CwiseNullaryOp, Eigen::Array > > >’ 722 | struct evaluator > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/BooleanRedux.h:84:50: required from ‘bool Eigen::DenseBase::all() const [with Derived = Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, -1, 1, false> >, const Eigen::CwiseNullaryOp, Eigen::Array > >]’ 84 | && SizeAtCompileTime * (int(Evaluator::CoeffReadCost) + int(NumTraits::AddCost)) <= EIGEN_UNROLLING_LIMIT | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:387:50: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 387 | ret = ret && (A21.array()==Scalar(0)).all(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 526 | m_info = internal::ldlt_inplace::unblocked(m_matrix, m_transpositions, m_temporary, m_sign) ? Success : NumericalIssue; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPP.cpp:22:52: required from here 22 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:167:44: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:175:24: required from ‘Eigen::ProductImpl::Scalar Eigen::ProductImpl::coeff(Eigen::Index, Eigen::Index) const [with Lhs = Eigen::Block, 1, -1, false>; Rhs = Eigen::Block, -1, 1, false>; int Option = 0; Scalar = double; Eigen::Index = long int]’ 175 | return internal::evaluator(derived()).coeff(row,col); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:530:29: required from ‘Eigen::DenseBase::CoeffReturnType Eigen::DenseBase::value() const [with Derived = Eigen::Product, 1, -1, false>, Eigen::Block, -1, 1, false>, 0>; CoeffReturnType = double]’ 530 | return derived().coeff(0,0); | ~~~~~~~~~~~~~~~^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:359:56: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 359 | mat.coeffRef(k,k) -= (A10 * temp.head(k)).value(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 526 | m_info = internal::ldlt_inplace::unblocked(m_matrix, m_transpositions, m_temporary, m_sign) ? Success : NumericalIssue; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPP.cpp:22:52: required from here 22 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 1, -1, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1043:41: required from ‘struct Eigen::internal::evaluator, 1, -1, false>, 1, -1, false> >’ 1043 | CoeffReadCost = evaluator::CoeffReadCost, | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, 1, -1, false>, 1, -1, false> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:564:45: required from ‘struct Eigen::internal::unary_evaluator, const Eigen::Block, 1, -1, false>, 1, -1, false> >, Eigen::internal::IndexBased, double>’ 564 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator, const Eigen::Block, 1, -1, false>, 1, -1, false> > >’ 90 | struct evaluator : public unary_evaluator | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:357:7: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseUnaryOp, const Eigen::Block, 1, -1, false>, 1, -1, false> >; typename Eigen::internal::traits::Scalar = double]’ 463 | return derived().redux(Eigen::internal::scalar_sum_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:221:28: required from ‘static typename Eigen::NumTraits::Scalar>::Real Eigen::internal::lpNorm_selector::run(const Eigen::MatrixBase&) [with Derived = Eigen::Block, 1, -1, false>, 1, -1, false>; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]’ 221 | return m.cwiseAbs().sum(); | ~~~~~~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:269:52: required from ‘typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::lpNorm() const [with int p = 1; Derived = Eigen::Block, 1, -1, false>, 1, -1, false>; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]’ 269 | return internal::lpNorm_selector::run(*this); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:514:125: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 514 | abs_col_sum = m_matrix.col(col).tail(size - col).template lpNorm<1>() + m_matrix.row(col).head(col).template lpNorm<1>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPP.cpp:22:52: required from here 22 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 1, -1, false>, 1, -1, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, 1, -1, false>, 1, -1, false> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:564:45: required from ‘struct Eigen::internal::unary_evaluator, const Eigen::Block, 1, -1, false>, 1, -1, false> >, Eigen::internal::IndexBased, double>’ 564 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator, const Eigen::Block, 1, -1, false>, 1, -1, false> > >’ 90 | struct evaluator : public unary_evaluator | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:357:7: required from ‘class Eigen::internal::redux_evaluator, const Eigen::Block, 1, -1, false>, 1, -1, false> > >’ 357 | class redux_evaluator : public internal::evaluator<_XprType> | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:414:17: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseUnaryOp, const Eigen::Block, 1, -1, false>, 1, -1, false> >; typename Eigen::internal::traits::Scalar = double]’ 414 | ThisEvaluator thisEval(derived()); | ^~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseUnaryOp, const Eigen::Block, 1, -1, false>, 1, -1, false> >; typename Eigen::internal::traits::Scalar = double]’ 463 | return derived().redux(Eigen::internal::scalar_sum_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:221:28: required from ‘static typename Eigen::NumTraits::Scalar>::Real Eigen::internal::lpNorm_selector::run(const Eigen::MatrixBase&) [with Derived = Eigen::Block, 1, -1, false>, 1, -1, false>; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]’ 221 | return m.cwiseAbs().sum(); | ~~~~~~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:269:52: required from ‘typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::lpNorm() const [with int p = 1; Derived = Eigen::Block, 1, -1, false>, 1, -1, false>; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]’ 269 | return internal::lpNorm_selector::run(*this); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:514:125: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 514 | abs_col_sum = m_matrix.col(col).tail(size - col).template lpNorm<1>() + m_matrix.row(col).head(col).template lpNorm<1>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPP.cpp:22:52: required from here 22 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 0>, -1, 1, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, 0>, -1, 1, false> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:564:45: required from ‘struct Eigen::internal::unary_evaluator, const Eigen::Block, 0>, -1, 1, false> >, Eigen::internal::IndexBased, double>’ 564 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator, const Eigen::Block, 0>, -1, 1, false> > >’ 90 | struct evaluator : public unary_evaluator | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Visitor.h:79:51: required from ‘class Eigen::internal::visitor_evaluator, const Eigen::Block, 0>, -1, 1, false> > >’ 79 | CoeffReadCost = internal::evaluator::CoeffReadCost | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Visitor.h:123:17: required from ‘void Eigen::DenseBase::visit(Visitor&) const [with Visitor = Eigen::internal::max_coeff_visitor, const Eigen::Block, 0>, -1, 1, false> >, 0>; Derived = Eigen::CwiseUnaryOp, const Eigen::Block, 0>, -1, 1, false> >]’ 123 | ThisEvaluator thisEval(derived()); | ^~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Visitor.h:374:14: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::maxCoeff(IndexType*) const [with int NaNPropagation = 0; IndexType = long int; Derived = Eigen::CwiseUnaryOp, const Eigen::Block, 0>, -1, 1, false> >; typename Eigen::internal::traits::Scalar = double]’ 374 | this->visit(maxVisitor); | ~~~~~~~~~~~^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:501:37: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::maxCoeff(IndexType*) const [with IndexType = long int; Derived = Eigen::CwiseUnaryOp, const Eigen::Block, 0>, -1, 1, false> >; typename Eigen::internal::traits::Scalar = double]’ 501 | return maxCoeff(index); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:325:54: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 325 | mat.diagonal().tail(size-k).cwiseAbs().maxCoeff(&index_of_biggest_in_corner); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 526 | m_info = internal::ldlt_inplace::unblocked(m_matrix, m_transpositions, m_temporary, m_sign) ? Success : NumericalIssue; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPP.cpp:22:52: required from here 22 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, -1, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:372:102: required from ‘struct Eigen::internal::plain_object_eval, -1, -1, false>, Eigen::Dense>’ 372 | typedef typename plain_matrix_type_dense::XprKind, evaluator::Flags>::type type; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:369:45: required from ‘struct Eigen::internal::generic_product_impl, -1, -1, false>, Eigen::Block, -1, 1, false>, Eigen::DenseShape, Eigen::DenseShape, 7>’ 369 | typedef typename nested_eval::type LhsNested; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:178:42: required from ‘static void Eigen::internal::Assignment, Eigen::internal::sub_assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::sub_assign_op&) [with DstXprType = Eigen::Block, -1, 1, false>; Lhs = Eigen::Block, -1, -1, false>; Rhs = Eigen::Block, -1, 1, false>; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>]’ 178 | generic_product_impl::subTo(dst, src.lhs(), src.rhs()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; Func = sub_assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/NoAlias.h:59:31: required from ‘ExpressionType& Eigen::NoAlias::operator-=(const StorageBase&) [with OtherDerived = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; ExpressionType = Eigen::Block, -1, 1, false>; StorageBase = Eigen::MatrixBase]’ 59 | call_assignment_no_alias(m_expression, other.derived(), internal::sub_assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:361:25: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 361 | A21.noalias() -= A20 * temp.head(k); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 526 | m_info = internal::ldlt_inplace::unblocked(m_matrix, m_transpositions, m_temporary, m_sign) ? Success : NumericalIssue; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPP.cpp:22:52: required from here 22 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, 1, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:372:102: required from ‘struct Eigen::internal::plain_object_eval, -1, 1, false>, Eigen::Dense>’ 372 | typedef typename plain_matrix_type_dense::XprKind, evaluator::Flags>::type type; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:370:45: required from ‘struct Eigen::internal::generic_product_impl, -1, -1, false>, Eigen::Block, -1, 1, false>, Eigen::DenseShape, Eigen::DenseShape, 7>’ 370 | typedef typename nested_eval::type RhsNested; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:178:42: required from ‘static void Eigen::internal::Assignment, Eigen::internal::sub_assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::sub_assign_op&) [with DstXprType = Eigen::Block, -1, 1, false>; Lhs = Eigen::Block, -1, -1, false>; Rhs = Eigen::Block, -1, 1, false>; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>]’ 178 | generic_product_impl::subTo(dst, src.lhs(), src.rhs()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; Func = sub_assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/NoAlias.h:59:31: required from ‘ExpressionType& Eigen::NoAlias::operator-=(const StorageBase&) [with OtherDerived = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; ExpressionType = Eigen::Block, -1, 1, false>; StorageBase = Eigen::MatrixBase]’ 59 | call_assignment_no_alias(m_expression, other.derived(), internal::sub_assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:361:25: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 361 | A21.noalias() -= A20 * temp.head(k); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 526 | m_info = internal::ldlt_inplace::unblocked(m_matrix, m_transpositions, m_temporary, m_sign) ? Success : NumericalIssue; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPP.cpp:22:52: required from here 22 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true>, -1, 1, false> >; Eigen::Index = long int]’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:243:63: required from ‘static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Evaluator&, const Func&, const XprType&) [with XprType = Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true>, -1, 1, false> >; Func = Eigen::internal::scalar_sum_op; Evaluator = Eigen::internal::redux_evaluator, const Eigen::Block, -1, 1, true>, -1, 1, false> > >; Scalar = double]’ 243 | const Index alignedStart = internal::first_default_aligned(xpr); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true>, -1, 1, false> >; typename Eigen::internal::traits::Scalar = double]’ 418 | return internal::redux_impl::run(thisEval, func, derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true>, -1, 1, false> >; typename Eigen::internal::traits::Scalar = double]’ 463 | return derived().redux(Eigen::internal::scalar_sum_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:221:28: required from ‘static typename Eigen::NumTraits::Scalar>::Real Eigen::internal::lpNorm_selector::run(const Eigen::MatrixBase&) [with Derived = Eigen::Block, -1, 1, true>, -1, 1, false>; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]’ 221 | return m.cwiseAbs().sum(); | ~~~~~~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:269:52: required from ‘typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::lpNorm() const [with int p = 1; Derived = Eigen::Block, -1, 1, true>, -1, 1, false>; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]’ 269 | return internal::lpNorm_selector::run(*this); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:514:74: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 514 | abs_col_sum = m_matrix.col(col).tail(size - col).template lpNorm<1>() + m_matrix.row(col).head(col).template lpNorm<1>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPP.cpp:22:52: required from here 22 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 654 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, false> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, false>, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, false> >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:251:54: required from ‘static void Eigen::internal::generic_product_impl::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix; Lhs = Eigen::Block, 1, -1, false>; Rhs = Eigen::Block, -1, 1, false>]’ 251 | dst.coeffRef(0,0) = (lhs.transpose().cwiseProduct(rhs)).sum(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:124:75: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:175:24: required from ‘Eigen::ProductImpl::Scalar Eigen::ProductImpl::coeff(Eigen::Index, Eigen::Index) const [with Lhs = Eigen::Block, 1, -1, false>; Rhs = Eigen::Block, -1, 1, false>; int Option = 0; Scalar = double; Eigen::Index = long int]’ 175 | return internal::evaluator(derived()).coeff(row,col); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:530:29: required from ‘Eigen::DenseBase::CoeffReturnType Eigen::DenseBase::value() const [with Derived = Eigen::Product, 1, -1, false>, Eigen::Block, -1, 1, false>, 0>; CoeffReturnType = double]’ 530 | return derived().coeff(0,0); | ~~~~~~~~~~~~~~~^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:359:56: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 359 | mat.coeffRef(k,k) -= (A10 * temp.head(k)).value(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 526 | m_info = internal::ldlt_inplace::unblocked(m_matrix, m_transpositions, m_temporary, m_sign) ? Success : NumericalIssue; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPP.cpp:22:52: required from here 22 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, -1, false>, 1, -1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, -1, -1, false>, 1, -1, false>, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, -1, false>, 1, -1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, -1, false>, 1, -1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, -1, false>, 1, -1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, -1, -1, false>, 1, -1, false, true>’ 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; Func = sub_assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/NoAlias.h:59:31: required from ‘ExpressionType& Eigen::NoAlias::operator-=(const StorageBase&) [with OtherDerived = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; ExpressionType = Eigen::Block, -1, 1, false>; StorageBase = Eigen::MatrixBase]’ 59 | call_assignment_no_alias(m_expression, other.derived(), internal::sub_assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:361:25: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 361 | A21.noalias() -= A20 * temp.head(k); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 526 | m_info = internal::ldlt_inplace::unblocked(m_matrix, m_transpositions, m_temporary, m_sign) ? Success : NumericalIssue; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPP.cpp:22:52: required from here 22 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, false>, -1, 1, true>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, false>, -1, 1, true>, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, false>, -1, 1, true> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, 1, false>, -1, 1, true> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, 1, false>, -1, 1, true>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, -1, 1, false>, -1, 1, true, true>’ 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; Func = sub_assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/NoAlias.h:59:31: required from ‘ExpressionType& Eigen::NoAlias::operator-=(const StorageBase&) [with OtherDerived = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; ExpressionType = Eigen::Block, -1, 1, false>; StorageBase = Eigen::MatrixBase]’ 59 | call_assignment_no_alias(m_expression, other.derived(), internal::sub_assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:361:25: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 361 | A21.noalias() -= A20 * temp.head(k); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 526 | m_info = internal::ldlt_inplace::unblocked(m_matrix, m_transpositions, m_temporary, m_sign) ? Success : NumericalIssue; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPP.cpp:22:52: required from here 22 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:333: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h: In instantiation of ‘class Eigen::internal::gemv_traits’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:87:38: required from ‘struct Eigen::internal::general_matrix_vector_product, 0, false, double, Eigen::internal::const_blas_data_mapper, false, 0>’ 87 | typedef typename Traits::LhsPacket LhsPacket; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:253:134: required from ‘static void Eigen::internal::gemv_dense_selector<2, 0, true>::run(const Lhs&, const Rhs&, Dest&, const typename Dest::Scalar&) [with Lhs = Eigen::Block, -1, -1, false>; Rhs = Eigen::Block, -1, 1, false>; Dest = Eigen::Block, -1, 1, false>; typename Dest::Scalar = double]’ 252 | general_matrix_vector_product | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 | ::run( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 254 | actualLhs.rows(), actualLhs.cols(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 | LhsMapper(actualLhs.data(), actualLhs.outerStride()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 | RhsMapper(actualRhs.data(), actualRhs.innerStride()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 | dest.data(), 1, | ~~~~~~~~~~~~~~~ 258 | compatibleAlpha); | ~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:388:34: required from ‘static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Block, -1, 1, false>; Lhs = Eigen::Block, -1, -1, false>; Rhs = Eigen::Block, -1, 1, false>; Scalar = double]’ 385 | internal::gemv_dense_selector::HasUsableDirectAccess) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 | >::run(actual_lhs, actual_rhs, dst, alpha); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:361:27: required from ‘static void Eigen::internal::generic_product_impl_base::scaleAndAddTo(Dst&, const Lhs&, const Rhs&, const Scalar&) [with Dst = Eigen::Block, -1, 1, false>; Lhs = Eigen::Block, -1, -1, false>; Rhs = Eigen::Block, -1, 1, false>; Derived = Eigen::internal::generic_product_impl, -1, -1, false>, Eigen::Block, -1, 1, false>, Eigen::DenseShape, Eigen::DenseShape, 7>; Scalar = double]’ 361 | { Derived::scaleAndAddTo(dst,lhs,rhs,alpha); } | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:357:18: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; Func = sub_assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/NoAlias.h:59:31: required from ‘ExpressionType& Eigen::NoAlias::operator-=(const StorageBase&) [with OtherDerived = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; ExpressionType = Eigen::Block, -1, 1, false>; StorageBase = Eigen::MatrixBase]’ 59 | call_assignment_no_alias(m_expression, other.derived(), internal::sub_assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:361:25: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 361 | A21.noalias() -= A20 * temp.head(k); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 526 | m_info = internal::ldlt_inplace::unblocked(m_matrix, m_transpositions, m_temporary, m_sign) ? Success : NumericalIssue; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPP.cpp:22:52: required from here 22 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 44 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 44 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 44 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 44 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 45 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 45 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 45 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 45 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 46 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 46 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 46 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 46 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 51 | Vectorizable = unpacket_traits<_LhsPacket>::vectorizable && | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 52 | unpacket_traits<_RhsPacket>::vectorizable && | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 53 | int(unpacket_traits<_LhsPacket>::size)==int(unpacket_traits<_RhsPacket>::size), | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 53 | int(unpacket_traits<_LhsPacket>::size)==int(unpacket_traits<_RhsPacket>::size), | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 54 | LhsPacketSize = Vectorizable ? unpacket_traits<_LhsPacket>::size : 1, | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 55 | RhsPacketSize = Vectorizable ? unpacket_traits<_RhsPacket>::size : 1, | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 56 | ResPacketSize = Vectorizable ? unpacket_traits<_ResPacket>::size : 1 | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 59 | typedef typename conditional::type LhsPacket; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 60 | typedef typename conditional::type RhsPacket; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 61 | typedef typename conditional::type ResPacket; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h: In instantiation of ‘class Eigen::internal::gemv_traits’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:91:42: required from ‘struct Eigen::internal::general_matrix_vector_product, 0, false, double, Eigen::internal::const_blas_data_mapper, false, 0>’ 91 | typedef typename HalfTraits::LhsPacket LhsPacketHalf; | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:253:134: required from ‘static void Eigen::internal::gemv_dense_selector<2, 0, true>::run(const Lhs&, const Rhs&, Dest&, const typename Dest::Scalar&) [with Lhs = Eigen::Block, -1, -1, false>; Rhs = Eigen::Block, -1, 1, false>; Dest = Eigen::Block, -1, 1, false>; typename Dest::Scalar = double]’ 252 | general_matrix_vector_product | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 | ::run( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 254 | actualLhs.rows(), actualLhs.cols(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 | LhsMapper(actualLhs.data(), actualLhs.outerStride()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 | RhsMapper(actualRhs.data(), actualRhs.innerStride()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 | dest.data(), 1, | ~~~~~~~~~~~~~~~ 258 | compatibleAlpha); | ~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:388:34: required from ‘static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Block, -1, 1, false>; Lhs = Eigen::Block, -1, -1, false>; Rhs = Eigen::Block, -1, 1, false>; Scalar = double]’ 385 | internal::gemv_dense_selector::HasUsableDirectAccess) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 | >::run(actual_lhs, actual_rhs, dst, alpha); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:361:27: required from ‘static void Eigen::internal::generic_product_impl_base::scaleAndAddTo(Dst&, const Lhs&, const Rhs&, const Scalar&) [with Dst = Eigen::Block, -1, 1, false>; Lhs = Eigen::Block, -1, -1, false>; Rhs = Eigen::Block, -1, 1, false>; Derived = Eigen::internal::generic_product_impl, -1, -1, false>, Eigen::Block, -1, 1, false>, Eigen::DenseShape, Eigen::DenseShape, 7>; Scalar = double]’ 361 | { Derived::scaleAndAddTo(dst,lhs,rhs,alpha); } | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:357:18: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; Func = sub_assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/NoAlias.h:59:31: required from ‘ExpressionType& Eigen::NoAlias::operator-=(const StorageBase&) [with OtherDerived = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; ExpressionType = Eigen::Block, -1, 1, false>; StorageBase = Eigen::MatrixBase]’ 59 | call_assignment_no_alias(m_expression, other.derived(), internal::sub_assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:361:25: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 361 | A21.noalias() -= A20 * temp.head(k); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 526 | m_info = internal::ldlt_inplace::unblocked(m_matrix, m_transpositions, m_temporary, m_sign) ? Success : NumericalIssue; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPP.cpp:22:52: required from here 22 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 44 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 44 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 44 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 44 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 45 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 45 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 45 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 45 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 46 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 46 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 46 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 46 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 51 | Vectorizable = unpacket_traits<_LhsPacket>::vectorizable && | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 52 | unpacket_traits<_RhsPacket>::vectorizable && | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 53 | int(unpacket_traits<_LhsPacket>::size)==int(unpacket_traits<_RhsPacket>::size), | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 53 | int(unpacket_traits<_LhsPacket>::size)==int(unpacket_traits<_RhsPacket>::size), | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 54 | LhsPacketSize = Vectorizable ? unpacket_traits<_LhsPacket>::size : 1, | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 55 | RhsPacketSize = Vectorizable ? unpacket_traits<_RhsPacket>::size : 1, | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 56 | ResPacketSize = Vectorizable ? unpacket_traits<_ResPacket>::size : 1 | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 59 | typedef typename conditional::type LhsPacket; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 60 | typedef typename conditional::type RhsPacket; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 61 | typedef typename conditional::type ResPacket; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h: In instantiation of ‘class Eigen::internal::gemv_traits’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:95:45: required from ‘struct Eigen::internal::general_matrix_vector_product, 0, false, double, Eigen::internal::const_blas_data_mapper, false, 0>’ 95 | typedef typename QuarterTraits::LhsPacket LhsPacketQuarter; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:253:134: required from ‘static void Eigen::internal::gemv_dense_selector<2, 0, true>::run(const Lhs&, const Rhs&, Dest&, const typename Dest::Scalar&) [with Lhs = Eigen::Block, -1, -1, false>; Rhs = Eigen::Block, -1, 1, false>; Dest = Eigen::Block, -1, 1, false>; typename Dest::Scalar = double]’ 252 | general_matrix_vector_product | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 | ::run( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 254 | actualLhs.rows(), actualLhs.cols(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 | LhsMapper(actualLhs.data(), actualLhs.outerStride()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 | RhsMapper(actualRhs.data(), actualRhs.innerStride()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 | dest.data(), 1, | ~~~~~~~~~~~~~~~ 258 | compatibleAlpha); | ~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:388:34: required from ‘static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Block, -1, 1, false>; Lhs = Eigen::Block, -1, -1, false>; Rhs = Eigen::Block, -1, 1, false>; Scalar = double]’ 385 | internal::gemv_dense_selector::HasUsableDirectAccess) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 | >::run(actual_lhs, actual_rhs, dst, alpha); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:361:27: required from ‘static void Eigen::internal::generic_product_impl_base::scaleAndAddTo(Dst&, const Lhs&, const Rhs&, const Scalar&) [with Dst = Eigen::Block, -1, 1, false>; Lhs = Eigen::Block, -1, -1, false>; Rhs = Eigen::Block, -1, 1, false>; Derived = Eigen::internal::generic_product_impl, -1, -1, false>, Eigen::Block, -1, 1, false>, Eigen::DenseShape, Eigen::DenseShape, 7>; Scalar = double]’ 361 | { Derived::scaleAndAddTo(dst,lhs,rhs,alpha); } | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:357:18: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; Func = sub_assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/NoAlias.h:59:31: required from ‘ExpressionType& Eigen::NoAlias::operator-=(const StorageBase&) [with OtherDerived = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; ExpressionType = Eigen::Block, -1, 1, false>; StorageBase = Eigen::MatrixBase]’ 59 | call_assignment_no_alias(m_expression, other.derived(), internal::sub_assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:361:25: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 361 | A21.noalias() -= A20 * temp.head(k); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 526 | m_info = internal::ldlt_inplace::unblocked(m_matrix, m_transpositions, m_temporary, m_sign) ? Success : NumericalIssue; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPP.cpp:22:52: required from here 22 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 44 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 44 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 44 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 44 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 45 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 45 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 45 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 45 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 46 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 46 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 46 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 46 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 51 | Vectorizable = unpacket_traits<_LhsPacket>::vectorizable && | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 52 | unpacket_traits<_RhsPacket>::vectorizable && | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 53 | int(unpacket_traits<_LhsPacket>::size)==int(unpacket_traits<_RhsPacket>::size), | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 53 | int(unpacket_traits<_LhsPacket>::size)==int(unpacket_traits<_RhsPacket>::size), | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 54 | LhsPacketSize = Vectorizable ? unpacket_traits<_LhsPacket>::size : 1, | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 55 | RhsPacketSize = Vectorizable ? unpacket_traits<_RhsPacket>::size : 1, | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 56 | ResPacketSize = Vectorizable ? unpacket_traits<_ResPacket>::size : 1 | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 59 | typedef typename conditional::type LhsPacket; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 60 | typedef typename conditional::type RhsPacket; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 61 | typedef typename conditional::type ResPacket; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 2, Eigen::Stride<0, 0> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 2, Eigen::Stride<0, 0> >, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 2, Eigen::Stride<0, 0> >, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 2, Eigen::Stride<0, 0> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 2, Eigen::Stride<0, 0> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 2, Eigen::Stride<0, 0> >, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; Func = sub_assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/NoAlias.h:59:31: required from ‘ExpressionType& Eigen::NoAlias::operator-=(const StorageBase&) [with OtherDerived = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; ExpressionType = Eigen::Block, -1, 1, false>; StorageBase = Eigen::MatrixBase]’ 59 | call_assignment_no_alias(m_expression, other.derived(), internal::sub_assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:361:25: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 361 | A21.noalias() -= A20 * temp.head(k); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 526 | m_info = internal::ldlt_inplace::unblocked(m_matrix, m_transpositions, m_temporary, m_sign) ? Success : NumericalIssue; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPP.cpp:22:52: required from here 22 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Matrix > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Matrix > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp, const Eigen::Matrix >’ 60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp >::type, internal::no_assignment_operator | ^~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28: required from ‘struct Eigen::internal::traits, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 2, Eigen::Stride<0, 0> > > >’ 38 | >::type Scalar; | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 2, Eigen::Stride<0, 0> >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; Func = sub_assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/NoAlias.h:59:31: required from ‘ExpressionType& Eigen::NoAlias::operator-=(const StorageBase&) [with OtherDerived = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; ExpressionType = Eigen::Block, -1, 1, false>; StorageBase = Eigen::MatrixBase]’ 59 | call_assignment_no_alias(m_expression, other.derived(), internal::sub_assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:361:25: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 361 | A21.noalias() -= A20 * temp.head(k); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 526 | m_info = internal::ldlt_inplace::unblocked(m_matrix, m_transpositions, m_temporary, m_sign) ? Success : NumericalIssue; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPP.cpp:22:52: required from here 22 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 2, Eigen::Stride<0, 0> > >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 2, Eigen::Stride<0, 0> > > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 2, Eigen::Stride<0, 0> > > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 2, Eigen::Stride<0, 0> >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 2, Eigen::Stride<0, 0> > >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:296:40: required from ‘static void Eigen::internal::gemv_dense_selector<2, 0, true>::run(const Lhs&, const Rhs&, Dest&, const typename Dest::Scalar&) [with Lhs = Eigen::Block, -1, -1, false>; Rhs = Eigen::Block, -1, 1, false>; Dest = Eigen::Block, -1, 1, false>; typename Dest::Scalar = double]’ 296 | dest.matrix() += actualAlpha * MappedDest(actualDestPtr, dest.size()); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:388:34: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; Func = sub_assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/NoAlias.h:59:31: required from ‘ExpressionType& Eigen::NoAlias::operator-=(const StorageBase&) [with OtherDerived = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; ExpressionType = Eigen::Block, -1, 1, false>; StorageBase = Eigen::MatrixBase]’ 59 | call_assignment_no_alias(m_expression, other.derived(), internal::sub_assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:361:25: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 361 | A21.noalias() -= A20 * temp.head(k); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 526 | m_info = internal::ldlt_inplace::unblocked(m_matrix, m_transpositions, m_temporary, m_sign) ? Success : NumericalIssue; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPP.cpp:22:52: required from here 22 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, -1, false>, 1, -1, false> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, -1, -1, false>, 1, -1, false> >, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, -1, false>, 1, -1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, -1, false>, 1, -1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl, -1, -1, false>, 1, -1, false>, Eigen::Dense>’ 118 | template class TransposeImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose, -1, -1, false>, 1, -1, false> >’ 52 | template class Transpose | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:50:23: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; Func = sub_assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/NoAlias.h:59:31: required from ‘ExpressionType& Eigen::NoAlias::operator-=(const StorageBase&) [with OtherDerived = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; ExpressionType = Eigen::Block, -1, 1, false>; StorageBase = Eigen::MatrixBase]’ 59 | call_assignment_no_alias(m_expression, other.derived(), internal::sub_assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:361:25: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 361 | A21.noalias() -= A20 * temp.head(k); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 526 | m_info = internal::ldlt_inplace::unblocked(m_matrix, m_transpositions, m_temporary, m_sign) ? Success : NumericalIssue; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPP.cpp:22:52: required from here 22 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Transpose, -1, -1, false>, 1, -1, false> >, const Eigen::Block, -1, 1, false>, -1, 1, true> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Transpose, -1, -1, false>, 1, -1, false> >, const Eigen::Block, -1, 1, false>, -1, 1, true> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Transpose, -1, -1, false>, 1, -1, false> >, const Eigen::Block, -1, 1, false>, -1, 1, true> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Transpose, -1, -1, false>, 1, -1, false> >, const Eigen::Block, -1, 1, false>, -1, 1, true>, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Transpose, -1, -1, false>, 1, -1, false> >, const Eigen::Block, -1, 1, false>, -1, 1, true> >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:50:56: required from ‘static Eigen::internal::dot_nocheck::ResScalar Eigen::internal::dot_nocheck::run(const Eigen::MatrixBase&, const Eigen::MatrixBase&) [with T = Eigen::Block, -1, -1, false>, 1, -1, false>; U = Eigen::Block, -1, 1, false>, -1, 1, true>; ResScalar = double]’ 50 | return a.transpose().template binaryExpr(b).sum(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:84:58: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; Func = sub_assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/NoAlias.h:59:31: required from ‘ExpressionType& Eigen::NoAlias::operator-=(const StorageBase&) [with OtherDerived = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; ExpressionType = Eigen::Block, -1, 1, false>; StorageBase = Eigen::MatrixBase]’ 59 | call_assignment_no_alias(m_expression, other.derived(), internal::sub_assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:361:25: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 361 | A21.noalias() -= A20 * temp.head(k); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 526 | m_info = internal::ldlt_inplace::unblocked(m_matrix, m_transpositions, m_temporary, m_sign) ? Success : NumericalIssue; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPP.cpp:22:52: required from here 22 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Matrix >, const Eigen::Block, 1>, Eigen::Transpose > >, -1, 1, false>, 0>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Matrix >, const Eigen::Block, 1>, Eigen::Transpose > >, -1, 1, false>, 0> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Matrix >, const Eigen::Block, 1>, Eigen::Transpose > >, -1, 1, false>, 0> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base, const Eigen::Matrix >, const Eigen::Block, 1>, Eigen::Transpose > >, -1, 1, false>, 0, 7>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl, const Eigen::Matrix >, const Eigen::Block, 1>, Eigen::Transpose > >, -1, 1, false>, 0, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, const Eigen::Matrix >, const Eigen::Block, 1>, Eigen::Transpose > >, -1, 1, false>, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:345:45: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:24:58: required from here 24 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 1>, Eigen::Transpose > >, -1, 1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 1>, Eigen::Transpose > >, -1, 1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1>, Eigen::Transpose > >, -1, 1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:172:103: required from ‘class Eigen::internal::BlockImpl_dense, 1>, Eigen::Transpose > >, -1, 1, false, false>’ 172 | template class BlockImpl_dense | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from ‘class Eigen::BlockImpl, 1>, Eigen::Transpose > >, -1, 1, false, Eigen::Dense>’ 154 | class BlockImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block, 1>, Eigen::Transpose > >, -1, 1, false>’ 103 | template class Block | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:114:15: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:24:58: required from here 24 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 1>, Eigen::Transpose > >, -1, 1, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, 1>, Eigen::Transpose > >, -1, 1, false> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:372:102: required from ‘struct Eigen::internal::plain_object_eval, 1>, Eigen::Transpose > >, -1, 1, false>, Eigen::Dense>’ 372 | typedef typename plain_matrix_type_dense::XprKind, evaluator::Flags>::type type; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:370:45: required from ‘struct Eigen::internal::generic_product_impl, const Eigen::Matrix >, const Eigen::Block, 1>, Eigen::Transpose > >, -1, 1, false>, Eigen::DenseShape, Eigen::DenseShape, 7>’ 370 | typedef typename nested_eval::type RhsNested; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:479:24: required from ‘static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix; Lhs = Eigen::CwiseUnaryOp, const Eigen::Matrix >; Rhs = Eigen::Solve, 1>, Eigen::Transpose > >; Scalar = double]’ 478 | return internal::generic_product_impl | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 | ::scaleAndAddTo(dst_vec, a_lhs, a_rhs.col(0), alpha); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:445:20: required from ‘static void Eigen::internal::generic_product_impl::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix; Lhs = Eigen::CwiseUnaryOp, const Eigen::Matrix >; Rhs = Eigen::Solve, 1>, Eigen::Transpose > >]’ 445 | scaleAndAddTo(dst, lhs, rhs, Scalar(1)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:24:58: required from here 24 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 1, -1, false>, Eigen::Solve, 1>, Eigen::Transpose > >, 0>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Matrix >, 1, -1, false>, Eigen::Solve, 1>, Eigen::Transpose > >, 0> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Matrix >, 1, -1, false>, Eigen::Solve, 1>, Eigen::Transpose > >, 0> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base, const Eigen::Matrix >, 1, -1, false>, Eigen::Solve, 1>, Eigen::Transpose > >, 0, 7>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl, const Eigen::Matrix >, 1, -1, false>, Eigen::Solve, 1>, Eigen::Transpose > >, 0, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, const Eigen::Matrix >, 1, -1, false>, Eigen::Solve, 1>, Eigen::Transpose > >, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:345:45: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:24:58: required from here 24 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 1, -1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Matrix >, 1, -1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Matrix >, 1, -1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:172:103: required from ‘class Eigen::internal::BlockImpl_dense, const Eigen::Matrix >, 1, -1, false, false>’ 172 | template class BlockImpl_dense | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from ‘class Eigen::BlockImpl, const Eigen::Matrix >, 1, -1, false, Eigen::Dense>’ 154 | class BlockImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block, const Eigen::Matrix >, 1, -1, false>’ 103 | template class Block | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:113:15: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:24:58: required from here 24 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, const Eigen::Matrix >, 1, -1, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, const Eigen::Matrix >, 1, -1, false> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:372:102: required from ‘struct Eigen::internal::plain_object_eval, const Eigen::Matrix >, 1, -1, false>, Eigen::Dense>’ 372 | typedef typename plain_matrix_type_dense::XprKind, evaluator::Flags>::type type; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:369:45: required from ‘struct Eigen::internal::generic_product_impl, const Eigen::Matrix >, 1, -1, false>, Eigen::Solve, 1>, Eigen::Transpose > >, Eigen::DenseShape, Eigen::DenseShape, 7>’ 369 | typedef typename nested_eval::type LhsNested; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:486:24: required from ‘static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix; Lhs = Eigen::CwiseUnaryOp, const Eigen::Matrix >; Rhs = Eigen::Solve, 1>, Eigen::Transpose > >; Scalar = double]’ 485 | return internal::generic_product_impl | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 486 | ::scaleAndAddTo(dst_vec, a_lhs.row(0), a_rhs, alpha); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:445:20: required from ‘static void Eigen::internal::generic_product_impl::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix; Lhs = Eigen::CwiseUnaryOp, const Eigen::Matrix >; Rhs = Eigen::Solve, 1>, Eigen::Transpose > >]’ 445 | scaleAndAddTo(dst, lhs, rhs, Scalar(1)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:24:58: required from here 24 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 1, -1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, 1, -1, false>, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 1, -1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1, -1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 1, -1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, 1, -1, false, true>’ 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:23:51: required from here 23 | xiEst = LamPhi * ldlt_SigmaYi.solve(yVec - muVec) ; // LamPhiSig * (yVec - muVec); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, -1, 1, true>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, -1, 1, true> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, -1, 1, true> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:172:103: required from ‘class Eigen::internal::BlockImpl_dense, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, -1, 1, true, false>’ 172 | template class BlockImpl_dense | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from ‘class Eigen::BlockImpl, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, -1, 1, true, Eigen::Dense>’ 154 | class BlockImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, -1, 1, true>’ 103 | template class Block | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:380:70: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:23:51: required from here 23 | xiEst = LamPhi * ldlt_SigmaYi.solve(yVec - muVec) ; // LamPhiSig * (yVec - muVec); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::Solve, 1>, Eigen::Transpose > >, 1>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::Solve, 1>, Eigen::Transpose > >, 1> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, Eigen::Solve, 1>, Eigen::Transpose > >, 1> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base, Eigen::Solve, 1>, Eigen::Transpose > >, 1, 8>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl, Eigen::Solve, 1>, Eigen::Transpose > >, 1, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, Eigen::Solve, 1>, Eigen::Transpose > >, 1>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:469:72: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:24:58: required from here 24 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Matrix > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Matrix > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp, const Eigen::Matrix >’ 60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp >::type, internal::no_assignment_operator | ^~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28: required from ‘struct Eigen::internal::traits, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Product, Eigen::Solve, 1>, Eigen::Transpose > >, 1> > >’ 38 | >::type Scalar; | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Product, Eigen::Solve, 1>, Eigen::Transpose > >, 1>, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:24:58: required from here 24 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Product, Eigen::Solve, 1>, Eigen::Transpose > >, 1> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Product, Eigen::Solve, 1>, Eigen::Transpose > >, 1> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Product, Eigen::Solve, 1>, Eigen::Transpose > >, 1> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Product, Eigen::Solve, 1>, Eigen::Transpose > >, 1>, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Product, Eigen::Solve, 1>, Eigen::Transpose > >, 1> >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:469:55: required from ‘static void Eigen::internal::generic_product_impl::eval_dynamic_impl(Dst&, const LhsT&, const RhsT&, const Func&, const Scalar&, Eigen::internal::true_type) [with Dst = Eigen::Matrix; LhsT = Eigen::Matrix; RhsT = Eigen::Solve, 1>, Eigen::Transpose > >; Func = Eigen::internal::assign_op; Scalar = double; Lhs = Eigen::CwiseUnaryOp, const Eigen::Matrix >; Rhs = Eigen::Solve, 1>, Eigen::Transpose > >]’ 469 | call_restricted_packet_assignment_no_alias(dst, s * lhs.lazyProduct(rhs), func); | ~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:446:22: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:24:58: required from here 24 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 1>, Eigen::Transpose > >, -1, 1, false>, -1, 1, true>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 1>, Eigen::Transpose > >, -1, 1, false>, -1, 1, true> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1>, Eigen::Transpose > >, -1, 1, false>, -1, 1, true> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:172:103: required from ‘class Eigen::internal::BlockImpl_dense, 1>, Eigen::Transpose > >, -1, 1, false>, -1, 1, true, false>’ 172 | template class BlockImpl_dense | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from ‘class Eigen::BlockImpl, 1>, Eigen::Transpose > >, -1, 1, false>, -1, 1, true, Eigen::Dense>’ 154 | class BlockImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block, 1>, Eigen::Transpose > >, -1, 1, false>, -1, 1, true>’ 103 | template class Block | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:380:70: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:24:58: required from here 24 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 1, -1, false>, 1, -1, true>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Matrix >, 1, -1, false>, 1, -1, true> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Matrix >, 1, -1, false>, 1, -1, true> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:172:103: required from ‘class Eigen::internal::BlockImpl_dense, const Eigen::Matrix >, 1, -1, false>, 1, -1, true, false>’ 172 | template class BlockImpl_dense | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from ‘class Eigen::BlockImpl, const Eigen::Matrix >, 1, -1, false>, 1, -1, true, Eigen::Dense>’ 154 | class BlockImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block, const Eigen::Matrix >, 1, -1, false>, 1, -1, true>’ 103 | template class Block | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:380:43: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:24:58: required from here 24 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, -1, false>, 1, -1, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, -1, -1, false>, 1, -1, false> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:311:41: required from ‘struct Eigen::internal::unary_evaluator, -1, -1, false>, 1, -1, false> >, Eigen::internal::IndexBased, double>’ 311 | CoeffReadCost = evaluator::CoeffReadCost, | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator, -1, -1, false>, 1, -1, false> > >’ 90 | struct evaluator : public unary_evaluator | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, -1, -1, false>, 1, -1, false> > >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:41: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::Transpose, -1, -1, false>, 1, -1, false> >, const Eigen::Block, -1, 1, false>, -1, 1, true> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ 739 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; Func = sub_assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/NoAlias.h:59:31: required from ‘ExpressionType& Eigen::NoAlias::operator-=(const StorageBase&) [with OtherDerived = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; ExpressionType = Eigen::Block, -1, 1, false>; StorageBase = Eigen::MatrixBase]’ 59 | call_assignment_no_alias(m_expression, other.derived(), internal::sub_assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:361:25: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 361 | A21.noalias() -= A20 * temp.head(k); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 526 | m_info = internal::ldlt_inplace::unblocked(m_matrix, m_transpositions, m_temporary, m_sign) ? Success : NumericalIssue; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPP.cpp:22:52: required from here 22 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, 1, false>, -1, 1, true> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, -1, 1, false>, -1, 1, true> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:78: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::Transpose, -1, -1, false>, 1, -1, false> >, const Eigen::Block, -1, 1, false>, -1, 1, true> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ 739 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8: required from ‘struct Eigen::internal::evaluator, const Eigen::Transpose, -1, -1, false>, 1, -1, false> >, const Eigen::Block, -1, 1, false>, -1, 1, true> > >’ 722 | struct evaluator > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:357:7: required from ‘class Eigen::internal::redux_evaluator, const Eigen::Transpose, -1, -1, false>, 1, -1, false> >, const Eigen::Block, -1, 1, false>, -1, 1, true> > >’ 357 | class redux_evaluator : public internal::evaluator<_XprType> | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:414:17: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseBinaryOp, const Eigen::Transpose, -1, -1, false>, 1, -1, false> >, const Eigen::Block, -1, 1, false>, -1, 1, true> >; typename Eigen::internal::traits::Scalar = double]’ 414 | ThisEvaluator thisEval(derived()); | ^~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; Func = sub_assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/NoAlias.h:59:31: required from ‘ExpressionType& Eigen::NoAlias::operator-=(const StorageBase&) [with OtherDerived = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; ExpressionType = Eigen::Block, -1, 1, false>; StorageBase = Eigen::MatrixBase]’ 59 | call_assignment_no_alias(m_expression, other.derived(), internal::sub_assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:361:25: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 361 | A21.noalias() -= A20 * temp.head(k); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 526 | m_info = internal::ldlt_inplace::unblocked(m_matrix, m_transpositions, m_temporary, m_sign) ? Success : NumericalIssue; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPP.cpp:22:52: required from here 22 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 1, -1, false> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1, -1, false> >, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 1, -1, false> >, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 1, -1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1, -1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl, 1, -1, false>, Eigen::Dense>’ 118 | template class TransposeImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:24:58: required from here 24 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase >, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl, Eigen::Dense>’ 118 | template class TransposeImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose >’ 52 | template class Transpose | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:207:26: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:24:58: required from here 24 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 1, -1, false> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Matrix >, 1, -1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Matrix >, 1, -1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl, const Eigen::Matrix >, 1, -1, false>, Eigen::Dense>’ 118 | template class TransposeImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose, const Eigen::Matrix >, 1, -1, false> >’ 52 | template class Transpose | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:207:43: required from ‘static void Eigen::internal::gemv_dense_selector<1, StorageOrder, BlasCompatible>::run(const Lhs&, const Rhs&, Dest&, const typename Dest::Scalar&) [with Lhs = Eigen::Block, const Eigen::Matrix >, 1, -1, false>; Rhs = Eigen::Matrix; Dest = Eigen::Block, 1, -1, false>; int StorageOrder = 1; bool BlasCompatible = true; typename Dest::Scalar = double]’ 207 | ::run(rhs.transpose(), lhs.transpose(), destT, alpha); | ~~~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:388:34: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:24:58: required from here 24 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, true>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, true>, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, true>, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, true> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, 1, true> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, 1, true>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:27:30: required from here 27 | fittedY = muVec + phiMat * xiEst; | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase >, const Eigen::Block, -1, 1, true>, 0>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >, const Eigen::Block, -1, 1, true>, 0> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >, const Eigen::Block, -1, 1, true>, 0> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base >, const Eigen::Block, -1, 1, true>, 0, 7>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl >, const Eigen::Block, -1, 1, true>, 0, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product >, const Eigen::Block, -1, 1, true>, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:345:45: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:27:30: required from here 27 | fittedY = muVec + phiMat * xiEst; | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, true>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, true>, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, true> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, 1, true> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, 1, true>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, -1, 1, true, true>’ 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:27:30: required from here 27 | fittedY = muVec + phiMat * xiEst; | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, 1, true> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, -1, 1, true> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:372:102: required from ‘struct Eigen::internal::plain_object_eval, -1, 1, true>, Eigen::Dense>’ 372 | typedef typename plain_matrix_type_dense::XprKind, evaluator::Flags>::type type; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:370:45: required from ‘struct Eigen::internal::generic_product_impl >, const Eigen::Block, -1, 1, true>, Eigen::DenseShape, Eigen::DenseShape, 7>’ 370 | typedef typename nested_eval::type RhsNested; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:479:24: required from ‘static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix; Lhs = Eigen::Map >; Rhs = Eigen::Matrix; Scalar = double]’ 478 | return internal::generic_product_impl | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 | ::scaleAndAddTo(dst_vec, a_lhs, a_rhs.col(0), alpha); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:455:20: required from ‘static void Eigen::internal::generic_product_impl::addTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix; Lhs = Eigen::Map >; Rhs = Eigen::Matrix]’ 455 | scaleAndAddTo(dst,lhs, rhs, Scalar(1)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:163:42: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:27:30: required from here 27 | fittedY = muVec + phiMat * xiEst; | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 1, 1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1, 1, false>, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 1, 1, false>, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 1, 1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1, 1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 1, 1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:27:30: required from here 27 | fittedY = muVec + phiMat * xiEst; | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase >, 1, -1, false>, Eigen::Matrix, 0>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >, 1, -1, false>, Eigen::Matrix, 0> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >, 1, -1, false>, Eigen::Matrix, 0> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base >, 1, -1, false>, Eigen::Matrix, 0, 7>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl >, 1, -1, false>, Eigen::Matrix, 0, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product >, 1, -1, false>, Eigen::Matrix, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:345:45: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:27:30: required from here 27 | fittedY = muVec + phiMat * xiEst; | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase >, 1, -1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase >, 1, -1, false>, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >, 1, -1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >, 1, -1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase >, 1, -1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense >, 1, -1, false, true>’ 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:27:30: required from here 27 | fittedY = muVec + phiMat * xiEst; | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator >, 1, -1, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator >, 1, -1, false> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:372:102: required from ‘struct Eigen::internal::plain_object_eval >, 1, -1, false>, Eigen::Dense>’ 372 | typedef typename plain_matrix_type_dense::XprKind, evaluator::Flags>::type type; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:369:45: required from ‘struct Eigen::internal::generic_product_impl >, 1, -1, false>, Eigen::Matrix, Eigen::DenseShape, Eigen::DenseShape, 7>’ 369 | typedef typename nested_eval::type LhsNested; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:486:24: required from ‘static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix; Lhs = Eigen::Map >; Rhs = Eigen::Matrix; Scalar = double]’ 485 | return internal::generic_product_impl | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 486 | ::scaleAndAddTo(dst_vec, a_lhs.row(0), a_rhs, alpha); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:455:20: required from ‘static void Eigen::internal::generic_product_impl::addTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix; Lhs = Eigen::Map >; Rhs = Eigen::Matrix]’ 455 | scaleAndAddTo(dst,lhs, rhs, Scalar(1)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:163:42: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:27:30: required from here 27 | fittedY = muVec + phiMat * xiEst; | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 1, -1, false> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, 1, -1, false> >, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 1, -1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1, -1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl, 1, -1, false>, Eigen::Dense>’ 118 | template class TransposeImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose, 1, -1, false> >’ 52 | template class Transpose | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:50:23: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:23:51: required from here 23 | xiEst = LamPhi * ldlt_SigmaYi.solve(yVec - muVec) ; // LamPhiSig * (yVec - muVec); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, -1, 1, true> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, -1, 1, true> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, -1, 1, true> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, -1, 1, true>, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, -1, 1, true> >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:50:56: required from ‘static Eigen::internal::dot_nocheck::ResScalar Eigen::internal::dot_nocheck::run(const Eigen::MatrixBase&, const Eigen::MatrixBase&) [with T = Eigen::Block, 1, -1, false>; U = Eigen::Block, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, -1, 1, true>; ResScalar = double]’ 50 | return a.transpose().template binaryExpr(b).sum(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:84:58: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:23:51: required from here 23 | xiEst = LamPhi * ldlt_SigmaYi.solve(yVec - muVec) ; // LamPhiSig * (yVec - muVec); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Transpose, const Eigen::Matrix >, 1, -1, false> >, const Eigen::Block, 1>, Eigen::Transpose > >, -1, 1, false>, -1, 1, true> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Transpose, const Eigen::Matrix >, 1, -1, false> >, const Eigen::Block, 1>, Eigen::Transpose > >, -1, 1, false>, -1, 1, true> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Transpose, const Eigen::Matrix >, 1, -1, false> >, const Eigen::Block, 1>, Eigen::Transpose > >, -1, 1, false>, -1, 1, true> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Transpose, const Eigen::Matrix >, 1, -1, false> >, const Eigen::Block, 1>, Eigen::Transpose > >, -1, 1, false>, -1, 1, true>, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Transpose, const Eigen::Matrix >, 1, -1, false> >, const Eigen::Block, 1>, Eigen::Transpose > >, -1, 1, false>, -1, 1, true> >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:50:56: required from ‘static Eigen::internal::dot_nocheck::ResScalar Eigen::internal::dot_nocheck::run(const Eigen::MatrixBase&, const Eigen::MatrixBase&) [with T = Eigen::Block, const Eigen::Matrix >, 1, -1, false>; U = Eigen::Block, 1>, Eigen::Transpose > >, -1, 1, false>, -1, 1, true>; ResScalar = double]’ 50 | return a.transpose().template binaryExpr(b).sum(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:84:58: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:24:58: required from here 24 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 1, -1, false>, 1, -1, true> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Matrix >, 1, -1, false>, 1, -1, true> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Matrix >, 1, -1, false>, 1, -1, true> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl, const Eigen::Matrix >, 1, -1, false>, 1, -1, true>, Eigen::Dense>’ 118 | template class TransposeImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose, const Eigen::Matrix >, 1, -1, false>, 1, -1, true> >’ 52 | template class Transpose | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:50:23: required from ‘static Eigen::internal::dot_nocheck::ResScalar Eigen::internal::dot_nocheck::run(const Eigen::MatrixBase&, const Eigen::MatrixBase&) [with T = Eigen::Block, const Eigen::Matrix >, 1, -1, false>, 1, -1, true>; U = Eigen::Block, 1>, Eigen::Transpose > >, -1, 1, false>; ResScalar = double]’ 50 | return a.transpose().template binaryExpr(b).sum(); | ~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:84:58: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:24:58: required from here 24 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Transpose, const Eigen::Matrix >, 1, -1, false>, 1, -1, true> >, const Eigen::Block, 1>, Eigen::Transpose > >, -1, 1, false> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Transpose, const Eigen::Matrix >, 1, -1, false>, 1, -1, true> >, const Eigen::Block, 1>, Eigen::Transpose > >, -1, 1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Transpose, const Eigen::Matrix >, 1, -1, false>, 1, -1, true> >, const Eigen::Block, 1>, Eigen::Transpose > >, -1, 1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Transpose, const Eigen::Matrix >, 1, -1, false>, 1, -1, true> >, const Eigen::Block, 1>, Eigen::Transpose > >, -1, 1, false>, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Transpose, const Eigen::Matrix >, 1, -1, false>, 1, -1, true> >, const Eigen::Block, 1>, Eigen::Transpose > >, -1, 1, false> >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:50:56: required from ‘static Eigen::internal::dot_nocheck::ResScalar Eigen::internal::dot_nocheck::run(const Eigen::MatrixBase&, const Eigen::MatrixBase&) [with T = Eigen::Block, const Eigen::Matrix >, 1, -1, false>, 1, -1, true>; U = Eigen::Block, 1>, Eigen::Transpose > >, -1, 1, false>; ResScalar = double]’ 50 | return a.transpose().template binaryExpr(b).sum(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:84:58: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:24:58: required from here 24 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:330: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of ‘class Eigen::internal::gebp_traits’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:147:40: required from ‘void Eigen::internal::evaluateProductBlockingSizesHeuristic(Index&, Index&, Index&, Index) [with LhsScalar = double; RhsScalar = double; int KcFactor = 1; Index = long int]’ 147 | typedef typename Traits::ResScalar ResScalar; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:342:81: required from ‘void Eigen::internal::computeProductBlockingSizes(Index&, Index&, Index&, Index) [with LhsScalar = double; RhsScalar = double; int KcFactor = 1; Index = long int]’ 342 | evaluateProductBlockingSizesHeuristic(k, m, n, num_threads); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:355:66: required from ‘Eigen::internal::gemm_blocking_space::gemm_blocking_space(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, bool) [with int StorageOrder = 0; _LhsScalar = double; _RhsScalar = double; int MaxRows = -1; int MaxCols = -1; int MaxDepth = -1; int KcFactor = 1; Eigen::Index = long int]’ 355 | computeProductBlockingSizes(this->m_kc, this->m_mc, this->m_nc, num_threads); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:507:18: required from ‘static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix; Lhs = Eigen::CwiseUnaryOp, const Eigen::Matrix >; Rhs = Eigen::Solve, 1>, Eigen::Transpose > >; Scalar = double]’ 507 | BlockingType blocking(dst.rows(), dst.cols(), lhs.cols(), 1, true); | ^~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:445:20: required from ‘static void Eigen::internal::generic_product_impl::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix; Lhs = Eigen::CwiseUnaryOp, const Eigen::Matrix >; Rhs = Eigen::Solve, 1>, Eigen::Transpose > >]’ 445 | scaleAndAddTo(dst, lhs, rhs, Scalar(1)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:24:58: required from here 24 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:425:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 425 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:425:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 425 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:425:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 425 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:425:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 425 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:426:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 426 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:426:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 426 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:426:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 426 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:426:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 426 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:427:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 427 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:427:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 427 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:427:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 427 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:427:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 427 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:49: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 432 | Vectorizable = unpacket_traits<_LhsPacket>::vectorizable && unpacket_traits<_RhsPacket>::vectorizable, | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:49: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:49: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:49: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:94: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 432 | Vectorizable = unpacket_traits<_LhsPacket>::vectorizable && unpacket_traits<_RhsPacket>::vectorizable, | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:94: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:94: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:94: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:433:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 433 | LhsPacketSize = Vectorizable ? unpacket_traits<_LhsPacket>::size : 1, | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:433:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:433:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:433:65: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:434:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 434 | RhsPacketSize = Vectorizable ? unpacket_traits<_RhsPacket>::size : 1, | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:434:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:434:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:434:65: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:435:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 435 | ResPacketSize = Vectorizable ? unpacket_traits<_ResPacket>::size : 1, | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:435:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:435:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:435:65: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:460:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 460 | typedef typename conditional::type LhsPacket; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:460:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:460:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:460:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:461:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 461 | typedef typename conditional::type RhsPacket; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:461:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:461:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:461:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:462:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 462 | typedef typename conditional::type ResPacket; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:462:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:462:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:462:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 465 | typedef QuadPacket RhsPacketx4; | ^~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of ‘struct Eigen::internal::gemm_pack_rhs, 4, 1, false, false>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:81:75: required from ‘static void Eigen::internal::general_matrix_matrix_product::run(Index, Index, Index, const LhsScalar*, Index, const RhsScalar*, Index, ResScalar*, Index, Index, ResScalar, Eigen::internal::level3_blocking&, Eigen::internal::GemmParallelInfo*) [with Index = long int; LhsScalar = double; int LhsStorageOrder = 0; bool ConjugateLhs = false; RhsScalar = double; int RhsStorageOrder = 1; bool ConjugateRhs = false; int ResInnerStride = 1; ResScalar = double]’ 81 | gemm_pack_rhs pack_rhs; | ^~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:230:14: required from ‘void Eigen::internal::gemm_functor::operator()(Index, Index, Index, Index, Eigen::internal::GemmParallelInfo*) const [with Scalar = double; Index = long int; Gemm = Eigen::internal::general_matrix_matrix_product; Lhs = Eigen::Matrix; Rhs = Eigen::Matrix; Dest = Eigen::Matrix; BlockingType = Eigen::internal::gemm_blocking_space<0, double, double, -1, -1, -1, 1, false>]’ 230 | Gemm::run(rows, cols, m_lhs.cols(), | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ 231 | &m_lhs.coeffRef(row,0), m_lhs.outerStride(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 | &m_rhs.coeffRef(0,col), m_rhs.outerStride(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 | (Scalar*)&(m_dest.coeffRef(row,col)), m_dest.innerStride(), m_dest.outerStride(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 | m_actualAlpha, m_blocking, info); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/Parallelizer.h:114:7: required from ‘void Eigen::internal::parallelize_gemm(const Functor&, Index, Index, Index, bool) [with bool Condition = true; Functor = gemm_functor, Eigen::Matrix, Eigen::Matrix, Eigen::Matrix, gemm_blocking_space<0, double, double, -1, -1, -1, 1, false> >; Index = long int]’ 114 | func(0,rows, 0,cols); | ~~~~^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:509:9: required from ‘static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix; Lhs = Eigen::CwiseUnaryOp, const Eigen::Matrix >; Rhs = Eigen::Solve, 1>, Eigen::Transpose > >; Scalar = double]’ 508 | internal::parallelize_gemm<(Dest::MaxRowsAtCompileTime>32 || Dest::MaxRowsAtCompileTime==Dynamic)> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 | (GemmFunctor(lhs, rhs, dst, actualAlpha, blocking), a_lhs.rows(), a_rhs.cols(), a_lhs.cols(), Dest::Flags&RowMajorBit); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:445:20: required from ‘static void Eigen::internal::generic_product_impl::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix; Lhs = Eigen::CwiseUnaryOp, const Eigen::Matrix >; Rhs = Eigen::Solve, 1>, Eigen::Transpose > >]’ 445 | scaleAndAddTo(dst, lhs, rhs, Scalar(1)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:24:58: required from here 24 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2504:50: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 2504 | typedef typename unpacket_traits::half HalfPacket; | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2505:82: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 2505 | typedef typename unpacket_traits::half>::half QuarterPacket; | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2505:82: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2508:56: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 2508 | HalfPacketSize = unpacket_traits::size, | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2508:56: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2509:70: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 2509 | QuarterPacketSize = unpacket_traits::size}; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2509:70: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2509:70: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of ‘class Eigen::internal::gebp_traits’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1080:42: required from ‘struct Eigen::internal::gebp_kernel, 4, 4, false, false>’ 1080 | typedef typename HalfTraits::LhsPacket LhsPacketHalf; | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:82:107: required from ‘static void Eigen::internal::general_matrix_matrix_product::run(Index, Index, Index, const LhsScalar*, Index, const RhsScalar*, Index, ResScalar*, Index, Index, ResScalar, Eigen::internal::level3_blocking&, Eigen::internal::GemmParallelInfo*) [with Index = long int; LhsScalar = double; int LhsStorageOrder = 0; bool ConjugateLhs = false; RhsScalar = double; int RhsStorageOrder = 1; bool ConjugateRhs = false; int ResInnerStride = 1; ResScalar = double]’ 82 | gebp_kernel gebp; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:230:14: required from ‘void Eigen::internal::gemm_functor::operator()(Index, Index, Index, Index, Eigen::internal::GemmParallelInfo*) const [with Scalar = double; Index = long int; Gemm = Eigen::internal::general_matrix_matrix_product; Lhs = Eigen::Matrix; Rhs = Eigen::Matrix; Dest = Eigen::Matrix; BlockingType = Eigen::internal::gemm_blocking_space<0, double, double, -1, -1, -1, 1, false>]’ 230 | Gemm::run(rows, cols, m_lhs.cols(), | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ 231 | &m_lhs.coeffRef(row,0), m_lhs.outerStride(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 | &m_rhs.coeffRef(0,col), m_rhs.outerStride(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 | (Scalar*)&(m_dest.coeffRef(row,col)), m_dest.innerStride(), m_dest.outerStride(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 | m_actualAlpha, m_blocking, info); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/Parallelizer.h:114:7: required from ‘void Eigen::internal::parallelize_gemm(const Functor&, Index, Index, Index, bool) [with bool Condition = true; Functor = gemm_functor, Eigen::Matrix, Eigen::Matrix, Eigen::Matrix, gemm_blocking_space<0, double, double, -1, -1, -1, 1, false> >; Index = long int]’ 114 | func(0,rows, 0,cols); | ~~~~^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:509:9: required from ‘static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix; Lhs = Eigen::CwiseUnaryOp, const Eigen::Matrix >; Rhs = Eigen::Solve, 1>, Eigen::Transpose > >; Scalar = double]’ 508 | internal::parallelize_gemm<(Dest::MaxRowsAtCompileTime>32 || Dest::MaxRowsAtCompileTime==Dynamic)> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 | (GemmFunctor(lhs, rhs, dst, actualAlpha, blocking), a_lhs.rows(), a_rhs.cols(), a_lhs.cols(), Dest::Flags&RowMajorBit); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:445:20: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:24:58: required from here 24 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:425:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 425 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:425:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 425 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:425:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 425 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:425:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 425 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:426:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 426 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:426:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 426 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:426:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 426 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:426:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 426 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:427:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 427 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:427:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 427 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:427:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 427 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:427:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 427 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:49: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 432 | Vectorizable = unpacket_traits<_LhsPacket>::vectorizable && unpacket_traits<_RhsPacket>::vectorizable, | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:49: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:49: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:49: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:94: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 432 | Vectorizable = unpacket_traits<_LhsPacket>::vectorizable && unpacket_traits<_RhsPacket>::vectorizable, | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:94: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:94: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:94: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:433:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 433 | LhsPacketSize = Vectorizable ? unpacket_traits<_LhsPacket>::size : 1, | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:433:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:433:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:433:65: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:434:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 434 | RhsPacketSize = Vectorizable ? unpacket_traits<_RhsPacket>::size : 1, | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:434:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:434:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:434:65: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:435:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 435 | ResPacketSize = Vectorizable ? unpacket_traits<_ResPacket>::size : 1, | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:435:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:435:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:435:65: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:460:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 460 | typedef typename conditional::type LhsPacket; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:460:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:460:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:460:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:461:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 461 | typedef typename conditional::type RhsPacket; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:461:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:461:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:461:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:462:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 462 | typedef typename conditional::type ResPacket; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:462:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:462:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:462:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 465 | typedef QuadPacket RhsPacketx4; | ^~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of ‘class Eigen::internal::gebp_traits’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1085:45: required from ‘struct Eigen::internal::gebp_kernel, 4, 4, false, false>’ 1085 | typedef typename QuarterTraits::LhsPacket LhsPacketQuarter; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:82:107: required from ‘static void Eigen::internal::general_matrix_matrix_product::run(Index, Index, Index, const LhsScalar*, Index, const RhsScalar*, Index, ResScalar*, Index, Index, ResScalar, Eigen::internal::level3_blocking&, Eigen::internal::GemmParallelInfo*) [with Index = long int; LhsScalar = double; int LhsStorageOrder = 0; bool ConjugateLhs = false; RhsScalar = double; int RhsStorageOrder = 1; bool ConjugateRhs = false; int ResInnerStride = 1; ResScalar = double]’ 82 | gebp_kernel gebp; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:230:14: required from ‘void Eigen::internal::gemm_functor::operator()(Index, Index, Index, Index, Eigen::internal::GemmParallelInfo*) const [with Scalar = double; Index = long int; Gemm = Eigen::internal::general_matrix_matrix_product; Lhs = Eigen::Matrix; Rhs = Eigen::Matrix; Dest = Eigen::Matrix; BlockingType = Eigen::internal::gemm_blocking_space<0, double, double, -1, -1, -1, 1, false>]’ 230 | Gemm::run(rows, cols, m_lhs.cols(), | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ 231 | &m_lhs.coeffRef(row,0), m_lhs.outerStride(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 | &m_rhs.coeffRef(0,col), m_rhs.outerStride(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 | (Scalar*)&(m_dest.coeffRef(row,col)), m_dest.innerStride(), m_dest.outerStride(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 | m_actualAlpha, m_blocking, info); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/Parallelizer.h:114:7: required from ‘void Eigen::internal::parallelize_gemm(const Functor&, Index, Index, Index, bool) [with bool Condition = true; Functor = gemm_functor, Eigen::Matrix, Eigen::Matrix, Eigen::Matrix, gemm_blocking_space<0, double, double, -1, -1, -1, 1, false> >; Index = long int]’ 114 | func(0,rows, 0,cols); | ~~~~^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:509:9: required from ‘static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix; Lhs = Eigen::CwiseUnaryOp, const Eigen::Matrix >; Rhs = Eigen::Solve, 1>, Eigen::Transpose > >; Scalar = double]’ 508 | internal::parallelize_gemm<(Dest::MaxRowsAtCompileTime>32 || Dest::MaxRowsAtCompileTime==Dynamic)> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 | (GemmFunctor(lhs, rhs, dst, actualAlpha, blocking), a_lhs.rows(), a_rhs.cols(), a_lhs.cols(), Dest::Flags&RowMajorBit); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:445:20: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:24:58: required from here 24 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:425:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 425 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:425:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 425 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:425:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 425 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:425:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 425 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:426:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 426 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:426:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 426 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:426:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 426 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:426:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 426 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:427:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 427 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:427:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 427 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:427:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 427 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:427:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 427 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:49: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 432 | Vectorizable = unpacket_traits<_LhsPacket>::vectorizable && unpacket_traits<_RhsPacket>::vectorizable, | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:49: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:49: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:49: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:94: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 432 | Vectorizable = unpacket_traits<_LhsPacket>::vectorizable && unpacket_traits<_RhsPacket>::vectorizable, | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:94: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:94: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:94: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:433:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 433 | LhsPacketSize = Vectorizable ? unpacket_traits<_LhsPacket>::size : 1, | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:433:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:433:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:433:65: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:434:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 434 | RhsPacketSize = Vectorizable ? unpacket_traits<_RhsPacket>::size : 1, | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:434:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:434:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:434:65: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:435:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 435 | ResPacketSize = Vectorizable ? unpacket_traits<_ResPacket>::size : 1, | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:435:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:435:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:435:65: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:460:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 460 | typedef typename conditional::type LhsPacket; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:460:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:460:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:460:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:461:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 461 | typedef typename conditional::type RhsPacket; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:461:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:461:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:461:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:462:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 462 | typedef typename conditional::type ResPacket; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:462:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:462:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:462:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 465 | typedef QuadPacket RhsPacketx4; | ^~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase >, Eigen::Matrix, 1>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >, Eigen::Matrix, 1> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >, Eigen::Matrix, 1> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base >, Eigen::Matrix, 1, 8>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl >, Eigen::Matrix, 1, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product >, Eigen::Matrix, 1>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:462:68: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:27:30: required from here 27 | fittedY = muVec + phiMat * xiEst; | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, true>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, true>, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, true>, -1, 1, true> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, 1, true>, -1, 1, true> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, 1, true>, -1, 1, true>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, -1, 1, true>, -1, 1, true, true>’ 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:27:30: required from here 27 | fittedY = muVec + phiMat * xiEst; | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase >, 1, -1, false>, 1, -1, true>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase >, 1, -1, false>, 1, -1, true>, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >, 1, -1, false>, 1, -1, true> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >, 1, -1, false>, 1, -1, true> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase >, 1, -1, false>, 1, -1, true>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense >, 1, -1, false>, 1, -1, true, true>’ 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:27:30: required from here 27 | fittedY = muVec + phiMat * xiEst; | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of ‘void Eigen::internal::gemm_pack_lhs::operator()(Scalar*, const DataMapper&, Index, Index, Index, Index) [with Scalar = double; Index = long int; DataMapper = Eigen::internal::const_blas_data_mapper; int Pack1 = 4; int Pack2 = 2; Packet = __vector(2) double; bool Conjugate = false; bool PanelMode = false]’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:184:17: required from ‘static void Eigen::internal::general_matrix_matrix_product::run(Index, Index, Index, const LhsScalar*, Index, const RhsScalar*, Index, ResScalar*, Index, Index, ResScalar, Eigen::internal::level3_blocking&, Eigen::internal::GemmParallelInfo*) [with Index = long int; LhsScalar = double; int LhsStorageOrder = 0; bool ConjugateLhs = false; RhsScalar = double; int RhsStorageOrder = 1; bool ConjugateRhs = false; int ResInnerStride = 1; ResScalar = double]’ 184 | pack_lhs(blockA, lhs.getSubMapper(i2,k2), actual_kc, actual_mc); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:230:14: required from ‘void Eigen::internal::gemm_functor::operator()(Index, Index, Index, Index, Eigen::internal::GemmParallelInfo*) const [with Scalar = double; Index = long int; Gemm = Eigen::internal::general_matrix_matrix_product; Lhs = Eigen::Matrix; Rhs = Eigen::Matrix; Dest = Eigen::Matrix; BlockingType = Eigen::internal::gemm_blocking_space<0, double, double, -1, -1, -1, 1, false>]’ 230 | Gemm::run(rows, cols, m_lhs.cols(), | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ 231 | &m_lhs.coeffRef(row,0), m_lhs.outerStride(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 | &m_rhs.coeffRef(0,col), m_rhs.outerStride(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 | (Scalar*)&(m_dest.coeffRef(row,col)), m_dest.innerStride(), m_dest.outerStride(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 | m_actualAlpha, m_blocking, info); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/Parallelizer.h:114:7: required from ‘void Eigen::internal::parallelize_gemm(const Functor&, Index, Index, Index, bool) [with bool Condition = true; Functor = gemm_functor, Eigen::Matrix, Eigen::Matrix, Eigen::Matrix, gemm_blocking_space<0, double, double, -1, -1, -1, 1, false> >; Index = long int]’ 114 | func(0,rows, 0,cols); | ~~~~^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:509:9: required from ‘static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix; Lhs = Eigen::CwiseUnaryOp, const Eigen::Matrix >; Rhs = Eigen::Solve, 1>, Eigen::Transpose > >; Scalar = double]’ 508 | internal::parallelize_gemm<(Dest::MaxRowsAtCompileTime>32 || Dest::MaxRowsAtCompileTime==Dynamic)> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 | (GemmFunctor(lhs, rhs, dst, actualAlpha, blocking), a_lhs.rows(), a_rhs.cols(), a_lhs.cols(), Dest::Flags&RowMajorBit); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:445:20: required from ‘static void Eigen::internal::generic_product_impl::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix; Lhs = Eigen::CwiseUnaryOp, const Eigen::Matrix >; Rhs = Eigen::Solve, 1>, Eigen::Transpose > >]’ 445 | scaleAndAddTo(dst, lhs, rhs, Scalar(1)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:24:58: required from here 24 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2100:82: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 2100 | typedef typename unpacket_traits::half>::half QuarterPacket; | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2102:56: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 2102 | HalfPacketSize = unpacket_traits::size, | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2103:62: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 2103 | QuarterPacketSize = unpacket_traits::size, | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2103:62: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of ‘void Eigen::internal::gebp_kernel::operator()(const DataMapper&, const LhsScalar*, const RhsScalar*, Index, Index, Index, ResScalar, Index, Index, Index, Index) [with LhsScalar = double; RhsScalar = double; Index = long int; DataMapper = Eigen::internal::blas_data_mapper; int mr = 4; int nr = 4; bool ConjugateLhs = false; bool ConjugateRhs = false; ResScalar = double]’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:198:15: required from ‘static void Eigen::internal::general_matrix_matrix_product::run(Index, Index, Index, const LhsScalar*, Index, const RhsScalar*, Index, ResScalar*, Index, Index, ResScalar, Eigen::internal::level3_blocking&, Eigen::internal::GemmParallelInfo*) [with Index = long int; LhsScalar = double; int LhsStorageOrder = 0; bool ConjugateLhs = false; RhsScalar = double; int RhsStorageOrder = 1; bool ConjugateRhs = false; int ResInnerStride = 1; ResScalar = double]’ 198 | gebp(res.getSubMapper(i2, j2), blockA, blockB, actual_mc, actual_kc, actual_nc, alpha); | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:230:14: required from ‘void Eigen::internal::gemm_functor::operator()(Index, Index, Index, Index, Eigen::internal::GemmParallelInfo*) const [with Scalar = double; Index = long int; Gemm = Eigen::internal::general_matrix_matrix_product; Lhs = Eigen::Matrix; Rhs = Eigen::Matrix; Dest = Eigen::Matrix; BlockingType = Eigen::internal::gemm_blocking_space<0, double, double, -1, -1, -1, 1, false>]’ 230 | Gemm::run(rows, cols, m_lhs.cols(), | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ 231 | &m_lhs.coeffRef(row,0), m_lhs.outerStride(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 | &m_rhs.coeffRef(0,col), m_rhs.outerStride(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 | (Scalar*)&(m_dest.coeffRef(row,col)), m_dest.innerStride(), m_dest.outerStride(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 | m_actualAlpha, m_blocking, info); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/Parallelizer.h:114:7: required from ‘void Eigen::internal::parallelize_gemm(const Functor&, Index, Index, Index, bool) [with bool Condition = true; Functor = gemm_functor, Eigen::Matrix, Eigen::Matrix, Eigen::Matrix, gemm_blocking_space<0, double, double, -1, -1, -1, 1, false> >; Index = long int]’ 114 | func(0,rows, 0,cols); | ~~~~^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:509:9: required from ‘static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix; Lhs = Eigen::CwiseUnaryOp, const Eigen::Matrix >; Rhs = Eigen::Solve, 1>, Eigen::Transpose > >; Scalar = double]’ 508 | internal::parallelize_gemm<(Dest::MaxRowsAtCompileTime>32 || Dest::MaxRowsAtCompileTime==Dynamic)> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 | (GemmFunctor(lhs, rhs, dst, actualAlpha, blocking), a_lhs.rows(), a_rhs.cols(), a_lhs.cols(), Dest::Flags&RowMajorBit); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:445:20: required from ‘static void Eigen::internal::generic_product_impl::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix; Lhs = Eigen::CwiseUnaryOp, const Eigen::Matrix >; Rhs = Eigen::Solve, 1>, Eigen::Transpose > >]’ 445 | scaleAndAddTo(dst, lhs, rhs, Scalar(1)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:24:58: required from here 24 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1920:103: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 1920 | const int SResPacketHalfSize = unpacket_traits::half>::size; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1921:138: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 1921 | const int SResPacketQuarterSize = unpacket_traits::half>::half>::size; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1921:138: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1977:135: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 1977 | typedef typename conditional=8,typename unpacket_traits::half,SResPacket>::type SResPacketHalf; | ^~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1978:135: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 1978 | typedef typename conditional=8,typename unpacket_traits::half,SLhsPacket>::type SLhsPacketHalf; | ^~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1979:135: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 1979 | typedef typename conditional=8,typename unpacket_traits::half,SRhsPacket>::type SRhsPacketHalf; | ^~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1980:135: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 1980 | typedef typename conditional=8,typename unpacket_traits::half,SAccPacket>::type SAccPacketHalf; | ^~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 1, 1, false> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1, 1, false> >, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 1, 1, false> >, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 1, 1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1, 1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl, 1, 1, false>, Eigen::Dense>’ 118 | template class TransposeImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:27:30: required from here 27 | fittedY = muVec + phiMat * xiEst; | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase >, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl, Eigen::Dense>’ 118 | template class TransposeImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose >’ 52 | template class Transpose | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:207:26: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:27:30: required from here 27 | fittedY = muVec + phiMat * xiEst; | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase >, 1, -1, false> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase >, 1, -1, false> >, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >, 1, -1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >, 1, -1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl >, 1, -1, false>, Eigen::Dense>’ 118 | template class TransposeImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose >, 1, -1, false> >’ 52 | template class Transpose | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:207:43: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:27:30: required from here 27 | fittedY = muVec + phiMat * xiEst; | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 1, -1, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, 1, -1, false> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:311:41: required from ‘struct Eigen::internal::unary_evaluator, 1, -1, false> >, Eigen::internal::IndexBased, double>’ 311 | CoeffReadCost = evaluator::CoeffReadCost, | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator, 1, -1, false> > >’ 90 | struct evaluator : public unary_evaluator | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, 1, -1, false> > >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:41: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, -1, 1, true> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ 739 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:23:51: required from here 23 | xiEst = LamPhi * ldlt_SigmaYi.solve(yVec - muVec) ; // LamPhiSig * (yVec - muVec); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, -1, 1, true> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, -1, 1, true> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:78: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, -1, 1, true> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ 739 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8: required from ‘struct Eigen::internal::evaluator, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, -1, 1, true> > >’ 722 | struct evaluator > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:357:7: required from ‘class Eigen::internal::redux_evaluator, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, -1, 1, true> > >’ 357 | class redux_evaluator : public internal::evaluator<_XprType> | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:414:17: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseBinaryOp, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, -1, 1, true> >; typename Eigen::internal::traits::Scalar = double]’ 414 | ThisEvaluator thisEval(derived()); | ^~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:23:51: required from here 23 | xiEst = LamPhi * ldlt_SigmaYi.solve(yVec - muVec) ; // LamPhiSig * (yVec - muVec); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 1>, Eigen::Transpose > >, -1, 1, false>, -1, 1, true> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, 1>, Eigen::Transpose > >, -1, 1, false>, -1, 1, true> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:78: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::Transpose, const Eigen::Matrix >, 1, -1, false> >, const Eigen::Block, 1>, Eigen::Transpose > >, -1, 1, false>, -1, 1, true> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ 739 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8: required from ‘struct Eigen::internal::evaluator, const Eigen::Transpose, const Eigen::Matrix >, 1, -1, false> >, const Eigen::Block, 1>, Eigen::Transpose > >, -1, 1, false>, -1, 1, true> > >’ 722 | struct evaluator > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:357:7: required from ‘class Eigen::internal::redux_evaluator, const Eigen::Transpose, const Eigen::Matrix >, 1, -1, false> >, const Eigen::Block, 1>, Eigen::Transpose > >, -1, 1, false>, -1, 1, true> > >’ 357 | class redux_evaluator : public internal::evaluator<_XprType> | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:414:17: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseBinaryOp, const Eigen::Transpose, const Eigen::Matrix >, 1, -1, false> >, const Eigen::Block, 1>, Eigen::Transpose > >, -1, 1, false>, -1, 1, true> >; typename Eigen::internal::traits::Scalar = double]’ 414 | ThisEvaluator thisEval(derived()); | ^~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:24:58: required from here 24 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, const Eigen::Matrix >, 1, -1, false>, 1, -1, true> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, const Eigen::Matrix >, 1, -1, false>, 1, -1, true> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:311:41: required from ‘struct Eigen::internal::unary_evaluator, const Eigen::Matrix >, 1, -1, false>, 1, -1, true> >, Eigen::internal::IndexBased, double>’ 311 | CoeffReadCost = evaluator::CoeffReadCost, | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator, const Eigen::Matrix >, 1, -1, false>, 1, -1, true> > >’ 90 | struct evaluator : public unary_evaluator | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, const Eigen::Matrix >, 1, -1, false>, 1, -1, true> > >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:41: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::Transpose, const Eigen::Matrix >, 1, -1, false>, 1, -1, true> >, const Eigen::Block, 1>, Eigen::Transpose > >, -1, 1, false> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ 739 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:24:58: required from here 24 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Transpose >, 1, -1, false> >, const Eigen::Block, -1, 1, true>, -1, 1, true> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Transpose >, 1, -1, false> >, const Eigen::Block, -1, 1, true>, -1, 1, true> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Transpose >, 1, -1, false> >, const Eigen::Block, -1, 1, true>, -1, 1, true> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Transpose >, 1, -1, false> >, const Eigen::Block, -1, 1, true>, -1, 1, true>, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Transpose >, 1, -1, false> >, const Eigen::Block, -1, 1, true>, -1, 1, true> >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:50:56: required from ‘static Eigen::internal::dot_nocheck::ResScalar Eigen::internal::dot_nocheck::run(const Eigen::MatrixBase&, const Eigen::MatrixBase&) [with T = Eigen::Block >, 1, -1, false>; U = Eigen::Block, -1, 1, true>, -1, 1, true>; ResScalar = double]’ 50 | return a.transpose().template binaryExpr(b).sum(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:84:58: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:27:30: required from here 27 | fittedY = muVec + phiMat * xiEst; | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase >, 1, -1, false>, 1, -1, true> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase >, 1, -1, false>, 1, -1, true> >, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >, 1, -1, false>, 1, -1, true> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >, 1, -1, false>, 1, -1, true> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl >, 1, -1, false>, 1, -1, true>, Eigen::Dense>’ 118 | template class TransposeImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose >, 1, -1, false>, 1, -1, true> >’ 52 | template class Transpose | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:50:23: [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:27:30: required from here 27 | fittedY = muVec + phiMat * xiEst; | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Transpose >, 1, -1, false>, 1, -1, true> >, const Eigen::Block, -1, 1, true> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Transpose >, 1, -1, false>, 1, -1, true> >, const Eigen::Block, -1, 1, true> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Transpose >, 1, -1, false>, 1, -1, true> >, const Eigen::Block, -1, 1, true> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Transpose >, 1, -1, false>, 1, -1, true> >, const Eigen::Block, -1, 1, true>, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Transpose >, 1, -1, false>, 1, -1, true> >, const Eigen::Block, -1, 1, true> >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:50:56: required from ‘static Eigen::internal::dot_nocheck::ResScalar Eigen::internal::dot_nocheck::run(const Eigen::MatrixBase&, const Eigen::MatrixBase&) [with T = Eigen::Block >, 1, -1, false>, 1, -1, true>; U = Eigen::Block, -1, 1, true>; ResScalar = double]’ 50 | return a.transpose().template binaryExpr(b).sum(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:84:58: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:27:30: required from here 27 | fittedY = muVec + phiMat * xiEst; | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 1, 1, false> >, 1, 1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1, 1, false> >, 1, 1, false>, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 1, 1, false> >, 1, 1, false>, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 1, 1, false> >, 1, 1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1, 1, false> >, 1, 1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 1, 1, false> >, 1, 1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:27:30: required from here 27 | fittedY = muVec + phiMat * xiEst; | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of ‘void Eigen::internal::gemm_pack_rhs::operator()(Scalar*, const DataMapper&, Index, Index, Index, Index) [with Scalar = double; Index = long int; DataMapper = Eigen::internal::const_blas_data_mapper; int nr = 4; bool Conjugate = false; bool PanelMode = false]’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:195:21: required from ‘static void Eigen::internal::general_matrix_matrix_product::run(Index, Index, Index, const LhsScalar*, Index, const RhsScalar*, Index, ResScalar*, Index, Index, ResScalar, Eigen::internal::level3_blocking&, Eigen::internal::GemmParallelInfo*) [with Index = long int; LhsScalar = double; int LhsStorageOrder = 0; bool ConjugateLhs = false; RhsScalar = double; int RhsStorageOrder = 0; bool ConjugateRhs = false; int ResInnerStride = 1; ResScalar = double]’ 195 | pack_rhs(blockB, rhs.getSubMapper(k2,j2), actual_kc, actual_nc); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:230:14: required from ‘void Eigen::internal::gemm_functor::operator()(Index, Index, Index, Index, Eigen::internal::GemmParallelInfo*) const [with Scalar = double; Index = long int; Gemm = Eigen::internal::general_matrix_matrix_product; Lhs = Eigen::Map >; Rhs = Eigen::Matrix; Dest = Eigen::Matrix; BlockingType = Eigen::internal::gemm_blocking_space<0, double, double, -1, 1, -1, 1, false>]’ 230 | Gemm::run(rows, cols, m_lhs.cols(), | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ 231 | &m_lhs.coeffRef(row,0), m_lhs.outerStride(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 | &m_rhs.coeffRef(0,col), m_rhs.outerStride(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 | (Scalar*)&(m_dest.coeffRef(row,col)), m_dest.innerStride(), m_dest.outerStride(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 | m_actualAlpha, m_blocking, info); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/Parallelizer.h:114:7: required from ‘void Eigen::internal::parallelize_gemm(const Functor&, Index, Index, Index, bool) [with bool Condition = true; Functor = gemm_functor, Eigen::Map >, Eigen::Matrix, Eigen::Matrix, gemm_blocking_space<0, double, double, -1, 1, -1, 1, false> >; Index = long int]’ 114 | func(0,rows, 0,cols); | ~~~~^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:509:9: required from ‘static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix; Lhs = Eigen::Map >; Rhs = Eigen::Matrix; Scalar = double]’ 508 | internal::parallelize_gemm<(Dest::MaxRowsAtCompileTime>32 || Dest::MaxRowsAtCompileTime==Dynamic)> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 | (GemmFunctor(lhs, rhs, dst, actualAlpha, blocking), a_lhs.rows(), a_rhs.cols(), a_lhs.cols(), Dest::Flags&RowMajorBit); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:455:20: required from ‘static void Eigen::internal::generic_product_impl::addTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix; Lhs = Eigen::Map >; Rhs = Eigen::Matrix]’ 455 | scaleAndAddTo(dst,lhs, rhs, Scalar(1)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:163:42: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:27:30: required from here 27 | fittedY = muVec + phiMat * xiEst; | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2459:62: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 2459 | PacketBlock kernel; | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, false>, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, 1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, 1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, -1, 1, false, true>’ 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:24:58: required from here 24 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, false> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, false>, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, false> >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:606:52: required from ‘const Eigen::internal::product_evaluator, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::CoeffReturnType Eigen::internal::product_evaluator, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::coeff(Eigen::Index, Eigen::Index) const [with Lhs = Eigen::Matrix; Rhs = Eigen::Solve, 1>, Eigen::Transpose > >; int ProductTag = 8; typename Eigen::internal::traits::Lhs>::Scalar = double; typename Eigen::Product::Lhs = Eigen::Matrix; typename Eigen::internal::traits::Rhs>::Scalar = double; typename Eigen::Product::Rhs = Eigen::Solve, 1>, Eigen::Transpose > >; CoeffReturnType = double; Eigen::Index = long int]’ 606 | return (m_lhs.row(row).transpose().cwiseProduct( m_rhs.col(col) )).sum(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:769:69: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:24:58: required from here 24 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::Transpose >, 2>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::Transpose >, 2> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, Eigen::Transpose >, 2> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base, Eigen::Transpose >, 2, 8>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl, Eigen::Transpose >, 2, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, Eigen::Transpose >, 2>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:577:26: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:24:58: required from here 24 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, 0>, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Diagonal.h:63:53: required from ‘class Eigen::Diagonal, 0>’ 63 | template class Diagonal | ^~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:587:61: required from ‘void Eigen::LDLT::_solve_impl_transposed(const RhsType&, DstType&) const [with bool Conjugate = true; RhsType = Eigen::Transpose >; DstType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 587 | const typename Diagonal::RealReturnType vecD(vectorD()); | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:569:31: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:24:58: required from here 24 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 1, -1, true>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1, -1, true>, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 1, -1, true>, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 1, -1, true> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1, -1, true> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 1, -1, true>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 17 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:24:58: required from here 24 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase > >, Eigen::Matrix, 2>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase > >, Eigen::Matrix, 2> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase > >, Eigen::Matrix, 2> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base > >, Eigen::Matrix, 2, 8>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl > >, Eigen::Matrix, 2, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product > >, Eigen::Matrix, 2>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:610:38: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:24:58: required from here 24 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, 1, true>, -1, 1, true> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, -1, 1, true>, -1, 1, true> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:78: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::Transpose >, 1, -1, false> >, const Eigen::Block, -1, 1, true>, -1, 1, true> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ 739 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8: required from ‘struct Eigen::internal::evaluator, const Eigen::Transpose >, 1, -1, false> >, const Eigen::Block, -1, 1, true>, -1, 1, true> > >’ 722 | struct evaluator > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:357:7: required from ‘class Eigen::internal::redux_evaluator, const Eigen::Transpose >, 1, -1, false> >, const Eigen::Block, -1, 1, true>, -1, 1, true> > >’ 357 | class redux_evaluator : public internal::evaluator<_XprType> | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:414:17: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseBinaryOp, const Eigen::Transpose >, 1, -1, false> >, const Eigen::Block, -1, 1, true>, -1, 1, true> >; typename Eigen::internal::traits::Scalar = double]’ 414 | ThisEvaluator thisEval(derived()); | ^~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:27:30: required from here 27 | fittedY = muVec + phiMat * xiEst; | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator >, 1, -1, false>, 1, -1, true> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator >, 1, -1, false>, 1, -1, true> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:311:41: required from ‘struct Eigen::internal::unary_evaluator >, 1, -1, false>, 1, -1, true> >, Eigen::internal::IndexBased, double>’ 311 | CoeffReadCost = evaluator::CoeffReadCost, | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator >, 1, -1, false>, 1, -1, true> > >’ 90 | struct evaluator : public unary_evaluator | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator >, 1, -1, false>, 1, -1, true> > >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:41: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::Transpose >, 1, -1, false>, 1, -1, true> >, const Eigen::Block, -1, 1, true> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ 739 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8: [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:27:30: required from here 27 | fittedY = muVec + phiMat * xiEst; | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > >, 2>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > >, 2> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > >, 2> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > >, 2, 7>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > >, 2, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > >, 2>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:577:26: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:23:51: required from here 23 | xiEst = LamPhi * ldlt_SigmaYi.solve(yVec - muVec) ; // LamPhiSig * (yVec - muVec); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase > >, Eigen::Matrix, 2>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase > >, Eigen::Matrix, 2> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase > >, Eigen::Matrix, 2> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base > >, Eigen::Matrix, 2, 7>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl > >, Eigen::Matrix, 2, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product > >, Eigen::Matrix, 2>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:610:38: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:23:51: required from here 23 | xiEst = LamPhi * ldlt_SigmaYi.solve(yVec - muVec) ; // LamPhiSig * (yVec - muVec); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:24:58: required from here 24 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::Matrix > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, Eigen::Matrix > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp, Eigen::Matrix >’ 60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp >::type, internal::no_assignment_operator | ^~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/SelfCwiseBinaryOp.h:41:67: required from ‘Derived& Eigen::DenseBase::operator/=(const Scalar&) [with Derived = Eigen::Block, 1, -1, true>; Scalar = double]’ 41 | internal::call_assignment(this->derived(), PlainObject::Constant(rows(),cols(),other), internal::div_assign_op()); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:599:18: required from ‘void Eigen::LDLT::_solve_impl_transposed(const RhsType&, DstType&) const [with bool Conjugate = true; RhsType = Eigen::Transpose >; DstType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 599 | dst.row(i) /= vecD(i); | ~~~~~~~~~~~^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:569:31: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:24:58: required from here 24 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Transpose >, 1, -1, false> >, const Eigen::Block, -1, 1, true> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Transpose >, 1, -1, false> >, const Eigen::Block, -1, 1, true> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Transpose >, 1, -1, false> >, const Eigen::Block, -1, 1, true> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Transpose >, 1, -1, false> >, const Eigen::Block, -1, 1, true>, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Transpose >, 1, -1, false> >, const Eigen::Block, -1, 1, true> >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:606:52: required from ‘const Eigen::internal::product_evaluator, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::CoeffReturnType Eigen::internal::product_evaluator, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::coeff(Eigen::Index, Eigen::Index) const [with Lhs = Eigen::Map >; Rhs = Eigen::Matrix; int ProductTag = 8; typename Eigen::internal::traits::Lhs>::Scalar = double; typename Eigen::Product::Lhs = Eigen::Map >; typename Eigen::internal::traits::Rhs>::Scalar = double; typename Eigen::Product::Rhs = Eigen::Matrix; CoeffReturnType = double; Eigen::Index = long int]’ 606 | return (m_lhs.row(row).transpose().cwiseProduct( m_rhs.col(col) )).sum(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:654:63: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:27:30: required from here 27 | fittedY = muVec + phiMat * xiEst; | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::Matrix > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, Eigen::Matrix > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp, Eigen::Matrix >’ 60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp >::type, internal::no_assignment_operator | ^~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/SelfCwiseBinaryOp.h:41:67: required from ‘Derived& Eigen::DenseBase::operator/=(const Scalar&) [with Derived = Eigen::Block, 1, 1, false>; Scalar = double]’ 41 | internal::call_assignment(this->derived(), PlainObject::Constant(rows(),cols(),other), internal::div_assign_op()); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:599:18: required from ‘void Eigen::LDLT::_solve_impl_transposed(const RhsType&, DstType&) const [with bool Conjugate = true; RhsType = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > >; DstType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 599 | dst.row(i) /= vecD(i); | ~~~~~~~~~~~^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:569:31: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:23:51: required from here 23 | xiEst = LamPhi * ldlt_SigmaYi.solve(yVec - muVec) ; // LamPhiSig * (yVec - muVec); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, 1, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, -1, 1, false> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:78: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, false> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ 739 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8: required from ‘struct Eigen::internal::evaluator, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, false> > >’ 722 | struct evaluator > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:357:7: required from ‘class Eigen::internal::redux_evaluator, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, false> > >’ 357 | class redux_evaluator : public internal::evaluator<_XprType> | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:414:17: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseBinaryOp, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, false> >; typename Eigen::internal::traits::Scalar = double]’ 414 | ThisEvaluator thisEval(derived()); | ^~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:24:58: required from here 24 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, 1, true> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:780:20: required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, 1, true>; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 2, Eigen::Stride<0, 0> > >; Functor = add_assign_op]’ 780 | DstEvaluatorType dstEvaluator(dst); | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31: required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, 1, true>; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 2, Eigen::Stride<0, 0> > >; Functor = Eigen::internal::add_assign_op; Weak = void]’ 954 | call_dense_assignment_loop(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, 1, true>; Src = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 2, Eigen::Stride<0, 0> > >; Func = add_assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:858:27: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block, -1, 1, true>; Src = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 2, Eigen::Stride<0, 0> > >; Func = add_assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 858 | call_assignment_no_alias(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:177:18: required from ‘Derived& Eigen::MatrixBase::operator+=(const Eigen::MatrixBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 2, Eigen::Stride<0, 0> > >; Derived = Eigen::Block, -1, 1, true>]’ 177 | call_assignment(derived(), other.derived(), internal::add_assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:296:25: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Product >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:27:30: required from here 27 | fittedY = muVec + phiMat * xiEst; | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 16, Eigen::Stride<0, 0> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 16, Eigen::Stride<0, 0> >, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 16, Eigen::Stride<0, 0> >, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 16, Eigen::Stride<0, 0> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 16, Eigen::Stride<0, 0> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 16, Eigen::Stride<0, 0> >, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 19 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:23:51: required from here 23 | xiEst = LamPhi * ldlt_SigmaYi.solve(yVec - muVec) ; // LamPhiSig * (yVec - muVec); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::OuterStride<> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::OuterStride<> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::OuterStride<> >, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map, 0, Eigen::OuterStride<> >’ 94 | template class Map | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularSolverVector.h:97:18: [ skipping 18 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:23:51: required from here 23 | xiEst = LamPhi * ldlt_SigmaYi.solve(yVec - muVec) ; // LamPhiSig * (yVec - muVec); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, -1, 1, true>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, -1, 1, true>, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::OuterStride<> >, -1, 1, true> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::OuterStride<> >, -1, 1, true> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::OuterStride<> >, -1, 1, true>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, 0, Eigen::OuterStride<> >, -1, 1, true, true>’ 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 20 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:23:51: required from here 23 | xiEst = LamPhi * ldlt_SigmaYi.solve(yVec - muVec) ; // LamPhiSig * (yVec - muVec); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false>, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false, true>’ 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 21 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:23:51: required from here 23 | xiEst = LamPhi * ldlt_SigmaYi.solve(yVec - muVec) ; // LamPhiSig * (yVec - muVec); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false>, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularSolverVector.h:125:66: required from ‘static void Eigen::internal::triangular_solve_vector::run(Index, const LhsScalar*, Index, RhsScalar*) [with LhsScalar = double; RhsScalar = double; Index = long int; int Mode = 5; bool Conjugate = false]’ 125 | Map >(rhs+s,r) -= rhs[i] * cjLhs.col(i).segment(s,r); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:73:12: [ skipping 17 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:23:51: required from here 23 | xiEst = LamPhi * ldlt_SigmaYi.solve(yVec - muVec) ; // LamPhiSig * (yVec - muVec); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::OuterStride<> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::OuterStride<> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::OuterStride<> >, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map, 0, Eigen::OuterStride<> >’ 94 | template class Map | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularSolverVector.h:39:18: [ skipping 18 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:23:51: required from here 23 | xiEst = LamPhi * ldlt_SigmaYi.solve(yVec - muVec) ; // LamPhiSig * (yVec - muVec); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 1, -1, true>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 1, -1, true>, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::OuterStride<> >, 1, -1, true> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::OuterStride<> >, 1, -1, true> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::OuterStride<> >, 1, -1, true>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, 0, Eigen::OuterStride<> >, 1, -1, true, true>’ 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 20 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:23:51: required from here 23 | xiEst = LamPhi * ldlt_SigmaYi.solve(yVec - muVec) ; // LamPhiSig * (yVec - muVec); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false>, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false, true>’ 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 21 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:23:51: required from here 23 | xiEst = LamPhi * ldlt_SigmaYi.solve(yVec - muVec) ; // LamPhiSig * (yVec - muVec); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false>, Eigen::Dense>’ 118 | template class TransposeImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >’ 52 | template class Transpose | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularSolverVector.h:78:57: [ skipping 18 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:23:51: required from here 23 | xiEst = LamPhi * ldlt_SigmaYi.solve(yVec - muVec) ; // LamPhiSig * (yVec - muVec); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map, 0, Eigen::Stride<0, 0> >’ 94 | template class Map | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularSolverVector.h:78:73: [ skipping 18 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:23:51: required from here 23 | xiEst = LamPhi * ldlt_SigmaYi.solve(yVec - muVec) ; // LamPhiSig * (yVec - muVec); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, const Eigen::Map, 0, Eigen::Stride<0, 0> >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularSolverVector.h:78:72: required from ‘static void Eigen::internal::triangular_solve_vector::run(Index, const LhsScalar*, Index, RhsScalar*) [with LhsScalar = double; RhsScalar = double; Index = long int; int Mode = 6; bool Conjugate = false]’ 78 | rhs[i] -= (cjLhs.row(i).segment(s,k).transpose().cwiseProduct(Map >(rhs+s,k))).sum(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:73:12: [ skipping 17 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:23:51: required from here 23 | xiEst = LamPhi * ldlt_SigmaYi.solve(yVec - muVec) ; // LamPhiSig * (yVec - muVec); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of ‘struct Eigen::internal::gemm_pack_rhs, 4, 1, false, true>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularSolverMatrix.h:233:85: required from ‘static void Eigen::internal::triangular_solve_matrix::run(Index, Index, const Scalar*, Index, Scalar*, Index, Index, Eigen::internal::level3_blocking&) [with Scalar = double; Index = long int; int Mode = 6; bool Conjugate = false; int TriStorageOrder = 1; int OtherInnerStride = 1]’ 233 | gemm_pack_rhs pack_rhs_panel; | ^~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularSolverMatrix.h:32:12: required from ‘static void Eigen::internal::triangular_solve_matrix::run(Index, Index, const Scalar*, Index, Scalar*, Index, Index, Eigen::internal::level3_blocking&) [with Scalar = double; Index = long int; int Side = 1; int Mode = 5; bool Conjugate = false; int TriStorageOrder = 0; int OtherInnerStride = 1]’ 27 | triangular_solve_matrix< | ~~~~~~~~~~~~~~~~~~~~~~~~ 28 | Scalar, Index, Side==OnTheLeft?OnTheRight:OnTheLeft, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 29 | (Mode&UnitDiag) | ((Mode&Upper) ? Lower : Upper), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 30 | NumTraits::IsComplex && Conjugate, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | TriStorageOrder==RowMajor ? ColMajor : RowMajor, ColMajor, OtherInnerStride> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | ::run(size, cols, tri, triStride, _other, otherIncr, otherStride, blocking); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:102:12: required from ‘static void Eigen::internal::triangular_solver_selector::run(const Lhs&, Rhs&) [with Lhs = const Eigen::Matrix; Rhs = Eigen::Matrix; int Side = 1; int Mode = 5]’ 100 | triangular_solve_matrix | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 | ::run(size, othersize, &actualLhs.coeffRef(0,0), actualLhs.outerStride(), &rhs.coeffRef(0,0), rhs.innerStride(), rhs.outerStride(), blocking); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:182:21: required from ‘void Eigen::TriangularViewImpl<_MatrixType, _Mode, Eigen::Dense>::solveInPlace(const Eigen::MatrixBase&) const [with int Side = 1; OtherDerived = Eigen::Matrix; _MatrixType = const Eigen::Matrix; unsigned int _Mode = 5]’ 181 | internal::triangular_solver_selector::type, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 | Side, Mode>::run(derived().nestedExpression(), otherCopy); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/TriangularMatrix.h:522:37: required from ‘void Eigen::TriangularViewImpl<_MatrixType, _Mode, Eigen::Dense>::solveInPlace(const Eigen::MatrixBase&) const [with OtherDerived = Eigen::Matrix; _MatrixType = const Eigen::Matrix; unsigned int _Mode = 5]’ 522 | { return solveInPlace(other); } | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:581:60: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:24:58: required from here 24 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2504:50: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 2504 | typedef typename unpacket_traits::half HalfPacket; | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2505:82: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 2505 | typedef typename unpacket_traits::half>::half QuarterPacket; | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2505:82: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2508:56: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 2508 | HalfPacketSize = unpacket_traits::size, | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2508:56: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2509:70: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 2509 | QuarterPacketSize = unpacket_traits::size}; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2509:70: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2509:70: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 1, -1, true> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:780:20: required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, 1, -1, true>; SrcXprType = Eigen::CwiseNullaryOp, Eigen::Matrix >; Functor = div_assign_op]’ 780 | DstEvaluatorType dstEvaluator(dst); | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31: required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, 1, -1, true>; SrcXprType = Eigen::CwiseNullaryOp, Eigen::Matrix >; Functor = Eigen::internal::div_assign_op; Weak = void]’ 954 | call_dense_assignment_loop(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, 1, -1, true>; Src = Eigen::CwiseNullaryOp, Eigen::Matrix >; Func = div_assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:858:27: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block, 1, -1, true>; Src = Eigen::CwiseNullaryOp, Eigen::Matrix >; Func = div_assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 858 | call_assignment_no_alias(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/SelfCwiseBinaryOp.h:41:28: required from ‘Derived& Eigen::DenseBase::operator/=(const Scalar&) [with Derived = Eigen::Block, 1, -1, true>; Scalar = double]’ 41 | internal::call_assignment(this->derived(), PlainObject::Constant(rows(),cols(),other), internal::div_assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:599:18: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:24:58: required from here 24 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 1, 1, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:780:20: required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, 1, 1, false>; SrcXprType = Eigen::CwiseNullaryOp, Eigen::Matrix >; Functor = div_assign_op]’ 780 | DstEvaluatorType dstEvaluator(dst); | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31: required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, 1, 1, false>; SrcXprType = Eigen::CwiseNullaryOp, Eigen::Matrix >; Functor = Eigen::internal::div_assign_op; Weak = void]’ 954 | call_dense_assignment_loop(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, 1, 1, false>; Src = Eigen::CwiseNullaryOp, Eigen::Matrix >; Func = div_assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:858:27: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block, 1, 1, false>; Src = Eigen::CwiseNullaryOp, Eigen::Matrix >; Func = div_assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 858 | call_assignment_no_alias(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/SelfCwiseBinaryOp.h:41:28: required from ‘Derived& Eigen::DenseBase::operator/=(const Scalar&) [with Derived = Eigen::Block, 1, 1, false>; Scalar = double]’ 41 | internal::call_assignment(this->derived(), PlainObject::Constant(rows(),cols(),other), internal::div_assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:599:18: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:23:51: required from here 23 | xiEst = LamPhi * ldlt_SigmaYi.solve(yVec - muVec) ; // LamPhiSig * (yVec - muVec); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of ‘void Eigen::internal::gemm_pack_lhs::operator()(Scalar*, const DataMapper&, Index, Index, Index, Index) [with Scalar = double; Index = long int; DataMapper = Eigen::internal::blas_data_mapper; int Pack1 = 4; int Pack2 = 2; Packet = __vector(2) double; bool Conjugate = false; bool PanelMode = true]’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularSolverMatrix.h:319:27: required from ‘static void Eigen::internal::triangular_solve_matrix::run(Index, Index, const Scalar*, Index, Scalar*, Index, Index, Eigen::internal::level3_blocking&) [with Scalar = double; Index = long int; int Mode = 6; bool Conjugate = false; int TriStorageOrder = 1; int OtherInnerStride = 1]’ 319 | pack_lhs_panel(blockA, lhs.getSubMapper(i2,absolute_j2), | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 | actualPanelWidth, actual_mc, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 | actual_kc, j2); | ~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularSolverMatrix.h:32:12: required from ‘static void Eigen::internal::triangular_solve_matrix::run(Index, Index, const Scalar*, Index, Scalar*, Index, Index, Eigen::internal::level3_blocking&) [with Scalar = double; Index = long int; int Side = 1; int Mode = 5; bool Conjugate = false; int TriStorageOrder = 0; int OtherInnerStride = 1]’ 27 | triangular_solve_matrix< | ~~~~~~~~~~~~~~~~~~~~~~~~ 28 | Scalar, Index, Side==OnTheLeft?OnTheRight:OnTheLeft, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 29 | (Mode&UnitDiag) | ((Mode&Upper) ? Lower : Upper), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 30 | NumTraits::IsComplex && Conjugate, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | TriStorageOrder==RowMajor ? ColMajor : RowMajor, ColMajor, OtherInnerStride> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | ::run(size, cols, tri, triStride, _other, otherIncr, otherStride, blocking); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:102:12: required from ‘static void Eigen::internal::triangular_solver_selector::run(const Lhs&, Rhs&) [with Lhs = const Eigen::Matrix; Rhs = Eigen::Matrix; int Side = 1; int Mode = 5]’ 100 | triangular_solve_matrix | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 | ::run(size, othersize, &actualLhs.coeffRef(0,0), actualLhs.outerStride(), &rhs.coeffRef(0,0), rhs.innerStride(), rhs.outerStride(), blocking); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:182:21: required from ‘void Eigen::TriangularViewImpl<_MatrixType, _Mode, Eigen::Dense>::solveInPlace(const Eigen::MatrixBase&) const [with int Side = 1; OtherDerived = Eigen::Matrix; _MatrixType = const Eigen::Matrix; unsigned int _Mode = 5]’ 181 | internal::triangular_solver_selector::type, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 | Side, Mode>::run(derived().nestedExpression(), otherCopy); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/TriangularMatrix.h:522:37: required from ‘void Eigen::TriangularViewImpl<_MatrixType, _Mode, Eigen::Dense>::solveInPlace(const Eigen::MatrixBase&) const [with OtherDerived = Eigen::Matrix; _MatrixType = const Eigen::Matrix; unsigned int _Mode = 5]’ 522 | { return solveInPlace(other); } | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:581:60: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:24:58: required from here 24 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2100:82: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 2100 | typedef typename unpacket_traits::half>::half QuarterPacket; | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2102:56: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 2102 | HalfPacketSize = unpacket_traits::size, | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2103:62: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 2103 | QuarterPacketSize = unpacket_traits::size, | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2103:62: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of ‘void Eigen::internal::gemm_pack_rhs::operator()(Scalar*, const DataMapper&, Index, Index, Index, Index) [with Scalar = double; Index = long int; DataMapper = Eigen::internal::const_blas_data_mapper; int nr = 4; bool Conjugate = false; bool PanelMode = true]’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularSolverMatrix.h:260:25: required from ‘static void Eigen::internal::triangular_solve_matrix::run(Index, Index, const Scalar*, Index, Scalar*, Index, Index, Eigen::internal::level3_blocking&) [with Scalar = double; Index = long int; int Mode = 5; bool Conjugate = false; int TriStorageOrder = 0; int OtherInnerStride = 1]’ 260 | pack_rhs_panel(blockB+j2*actual_kc, | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ 261 | rhs.getSubMapper(actual_k2+panelOffset, actual_j2), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 | panelLength, actualPanelWidth, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 | actual_kc, panelOffset); | ~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularSolverMatrix.h:32:12: required from ‘static void Eigen::internal::triangular_solve_matrix::run(Index, Index, const Scalar*, Index, Scalar*, Index, Index, Eigen::internal::level3_blocking&) [with Scalar = double; Index = long int; int Side = 1; int Mode = 6; bool Conjugate = false; int TriStorageOrder = 1; int OtherInnerStride = 1]’ 27 | triangular_solve_matrix< | ~~~~~~~~~~~~~~~~~~~~~~~~ 28 | Scalar, Index, Side==OnTheLeft?OnTheRight:OnTheLeft, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 29 | (Mode&UnitDiag) | ((Mode&Upper) ? Lower : Upper), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 30 | NumTraits::IsComplex && Conjugate, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | TriStorageOrder==RowMajor ? ColMajor : RowMajor, ColMajor, OtherInnerStride> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | ::run(size, cols, tri, triStride, _other, otherIncr, otherStride, blocking); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:102:12: required from ‘static void Eigen::internal::triangular_solver_selector::run(const Lhs&, Rhs&) [with Lhs = const Eigen::Transpose >; Rhs = Eigen::Matrix; int Side = 1; int Mode = 6]’ 100 | triangular_solve_matrix | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 | ::run(size, othersize, &actualLhs.coeffRef(0,0), actualLhs.outerStride(), &rhs.coeffRef(0,0), rhs.innerStride(), rhs.outerStride(), blocking); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:182:21: required from ‘void Eigen::TriangularViewImpl<_MatrixType, _Mode, Eigen::Dense>::solveInPlace(const Eigen::MatrixBase&) const [with int Side = 1; OtherDerived = Eigen::Matrix; _MatrixType = const Eigen::Transpose >; unsigned int _Mode = 6]’ 181 | internal::triangular_solver_selector::type, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 | Side, Mode>::run(derived().nestedExpression(), otherCopy); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/TriangularMatrix.h:522:37: required from ‘void Eigen::TriangularViewImpl<_MatrixType, _Mode, Eigen::Dense>::solveInPlace(const Eigen::MatrixBase&) const [with OtherDerived = Eigen::Matrix; _MatrixType = const Eigen::Transpose >; unsigned int _Mode = 6]’ 522 | { return solveInPlace(other); } | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:606:71: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:24:58: required from here 24 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2459:62: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 2459 | PacketBlock kernel; | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, 1, -1, true> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, 1, -1, true> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1043:41: required from ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >’ 1043 | CoeffReadCost = evaluator::CoeffReadCost, | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:311:41: required from ‘struct Eigen::internal::unary_evaluator, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, Eigen::internal::IndexBased, double>’ 311 | CoeffReadCost = evaluator::CoeffReadCost, | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> > >’ 90 | struct evaluator : public unary_evaluator | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: [ skipping 24 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:23:51: required from here 23 | xiEst = LamPhi * ldlt_SigmaYi.solve(yVec - muVec) ; // LamPhiSig * (yVec - muVec); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:311:41: required from ‘struct Eigen::internal::unary_evaluator, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, Eigen::internal::IndexBased, double>’ 311 | CoeffReadCost = evaluator::CoeffReadCost, | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> > >’ 90 | struct evaluator : public unary_evaluator | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> > >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:41: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ 739 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8: [ skipping 22 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:23:51: required from here 23 | xiEst = LamPhi * ldlt_SigmaYi.solve(yVec - muVec) ; // LamPhiSig * (yVec - muVec); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, false>, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, false>, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, 1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, 1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 25 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:24:58: required from here 24 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::CwiseBinaryOp, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >; Eigen::Index = long int]’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:243:63: required from ‘static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Evaluator&, const Func&, const XprType&) [with XprType = Eigen::CwiseBinaryOp, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >; Func = Eigen::internal::scalar_sum_op; Evaluator = Eigen::internal::redux_evaluator, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >; Scalar = double]’ 243 | const Index alignedStart = internal::first_default_aligned(xpr); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseBinaryOp, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >; typename Eigen::internal::traits::Scalar = double]’ 418 | return internal::redux_impl::run(thisEval, func, derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseBinaryOp, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >; typename Eigen::internal::traits::Scalar = double]’ 463 | return derived().redux(Eigen::internal::scalar_sum_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularSolverVector.h:78:127: required from ‘static void Eigen::internal::triangular_solve_vector::run(Index, const LhsScalar*, Index, RhsScalar*) [with LhsScalar = double; RhsScalar = double; Index = long int; int Mode = 6; bool Conjugate = false]’ 78 | rhs[i] -= (cjLhs.row(i).segment(s,k).transpose().cwiseProduct(Map >(rhs+s,k))).sum(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:73:12: required from ‘static void Eigen::internal::triangular_solver_selector::run(const Lhs&, Rhs&) [with Lhs = const Eigen::Transpose >; Rhs = Eigen::Matrix; int Side = 1; int Mode = 6]’ 71 | triangular_solve_vector | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 | ::run(actualLhs.cols(), actualLhs.data(), actualLhs.outerStride(), actualRhs); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:182:21: [ skipping 16 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:23:51: required from here 23 | xiEst = LamPhi * ldlt_SigmaYi.solve(yVec - muVec) ; // LamPhiSig * (yVec - muVec); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 654 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, -1, 1, true> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, -1, 1, true> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1043:41: required from ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >’ 1043 | CoeffReadCost = evaluator::CoeffReadCost, | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:78: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ 739 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8: required from ‘struct Eigen::internal::evaluator, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> > >’ 722 | struct evaluator > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:774:20: [ skipping 23 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:23:51: required from here 23 | xiEst = LamPhi * ldlt_SigmaYi.solve(yVec - muVec) ; // LamPhiSig * (yVec - muVec); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:78: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ 739 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8: required from ‘struct Eigen::internal::evaluator, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> > >’ 722 | struct evaluator > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:774:20: required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Map >; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >; Functor = sub_assign_op]’ 774 | SrcEvaluatorType srcEvaluator(src); | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31: required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Map >; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >; Functor = Eigen::internal::sub_assign_op; Weak = void]’ 954 | call_dense_assignment_loop(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: [ skipping 21 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map >, const Eigen::Map > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:23:51: required from here 23 | xiEst = LamPhi * ldlt_SigmaYi.solve(yVec - muVec) ; // LamPhiSig * (yVec - muVec); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, 1, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:774:20: required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, 1, false>; SrcXprType = Eigen::Block, -1, 1, false>; Functor = swap_assign_op]’ 774 | SrcEvaluatorType srcEvaluator(src); | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31: required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, 1, false>; SrcXprType = Eigen::Block, -1, 1, false>; Functor = Eigen::internal::swap_assign_op; Weak = void]’ 954 | call_dense_assignment_loop(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::Block, -1, 1, false>; Func = swap_assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:858:27: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::Block, -1, 1, false>; Func = swap_assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 858 | call_assignment_no_alias(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:424:22: required from ‘void Eigen::DenseBase::swap(const Eigen::DenseBase&) [with OtherDerived = Eigen::Block, -1, 1, false>; Derived = Eigen::Block, -1, 1, false>]’ 424 | call_assignment(derived(), other.const_cast_derived(), internal::swap_assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:1129:51: [ skipping 21 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPP.cpp:24:58: required from here 24 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppEigen/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c GetIndCEScoresCPPnewInd.cpp -o GetIndCEScoresCPPnewInd.o In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:205, from /usr/local/lib/R/library/RcppEigen/include/Eigen/Dense:1, from /usr/local/lib/R/library/RcppEigen/include/RcppEigenForward.h:28, from /usr/local/lib/R/library/RcppEigen/include/RcppEigen.h:25, from GetIndCEScoresCPPnewInd.cpp:2: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes] 49 | template<> struct is_arithmetic<__m128> { enum { value = true }; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes] 51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 222 | template<> struct unpacket_traits { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 228 | template<> struct unpacket_traits { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 1124 | ptranspose(PacketBlock& kernel) { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 1129 | ptranspose(PacketBlock& kernel) { | ^ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:174: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:165: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46: required from here 24 | ResAlignment = traits >::Alignment | ^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:271: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3: required from here 27 | { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47: required from here 98 | ResAlignment = traits >::Alignment | ^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3: required from here 102 | { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/SparseCore:37, from /usr/local/lib/R/library/RcppEigen/include/Eigen/Sparse:26, from /usr/local/lib/R/library/RcppEigen/include/RcppEigenForward.h:29: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase >’ 36 | class SparseCompressedBase | ^~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from ‘class Eigen::SparseMatrix’ 96 | class SparseMatrix | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here 61 | typedef Triplet T; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ GetIndCEScoresCPPnewInd.cpp:9:49: required from here 9 | Eigen::MatrixXd pinv( const Eigen::MatrixXd& Mat){ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ GetIndCEScoresCPPnewInd.cpp:9:49: required from here 9 | Eigen::MatrixXd pinv( const Eigen::MatrixXd& Mat){ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/SVDBase.h:274:22: required from ‘class Eigen::SVDBase, 2> >’ 274 | SingularValuesType m_singularValues; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:488:60: required from ‘class Eigen::JacobiSVD, 2>’ 488 | template class JacobiSVD | ^~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:44: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/QR/ColPivHouseholderQR.h:440:19: required from ‘class Eigen::ColPivHouseholderQR >’ 440 | RowVectorType m_temp; | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:246:10: required from ‘struct Eigen::internal::qr_preconditioner_impl, 2, 0, true>’ 246 | QRType m_qr; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:609:110: required from ‘class Eigen::JacobiSVD, 2>’ 609 | internal::qr_preconditioner_impl m_qr_precond_morecols; | ^~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:44: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::DiagonalWrapper >, 1>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::DiagonalWrapper >, 1> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, Eigen::DiagonalWrapper >, 1> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base, Eigen::DiagonalWrapper >, 1, 8>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl, Eigen::DiagonalWrapper >, 1, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, Eigen::DiagonalWrapper >, 1>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ GetIndCEScoresCPPnewInd.cpp:23:43: required from here 23 | return(svdMat.matrixV()*Sinv.asDiagonal()*svdMat.matrixU().transpose()); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase >, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl, Eigen::Dense>’ 118 | template class TransposeImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose >’ 52 | template class Transpose | ^~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:23:71: required from here 23 | return(svdMat.matrixV()*Sinv.asDiagonal()*svdMat.matrixU().transpose()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0, 8>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ GetIndCEScoresCPPnewInd.cpp:23:72: required from here 23 | return(svdMat.matrixV()*Sinv.asDiagonal()*svdMat.matrixU().transpose()); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: required from ‘class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 1>’ 223 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map, 0, Eigen::Stride<0, 0> >’ 94 | template class Map | ^~~ GetIndCEScoresCPPnewInd.cpp:31:40: required from here 31 | const unsigned int lenlamVec = lamVec.size(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::Matrix > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, Eigen::Matrix > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp, Eigen::Matrix >’ 60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp >::type, internal::no_assignment_operator | ^~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:33:52: required from here 33 | Eigen::MatrixXd xiVar = Eigen::MatrixXd::Constant(lenlamVec,lenlamVec,std::numeric_limits::quiet_NaN()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: required from ‘class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 1>’ 223 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map, 0, Eigen::Stride<0, 0> >’ 94 | template class Map | ^~~ GetIndCEScoresCPPnewInd.cpp:37:56: required from here 37 | Eigen::MatrixXd LamPhi = lamVec.asDiagonal() * phiMat.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> > >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> > >, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> > > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl, 0, Eigen::Stride<0, 0> >, Eigen::Dense>’ 118 | template class TransposeImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose, 0, Eigen::Stride<0, 0> > >’ 52 | template class Transpose | ^~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:37:66: required from here 37 | Eigen::MatrixXd LamPhi = lamVec.asDiagonal() * phiMat.transpose(); | ~~~~~~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> > >, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 1>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > >, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 1> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> > >, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 1> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base, 0, Eigen::Stride<0, 0> > >, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 1, 8>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl, 0, Eigen::Stride<0, 0> > >, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 1, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, 0, Eigen::Stride<0, 0> > >, Eigen::Transpose, 0, Eigen::Stride<0, 0> > >, 1>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ GetIndCEScoresCPPnewInd.cpp:37:67: required from here 37 | Eigen::MatrixXd LamPhi = lamVec.asDiagonal() * phiMat.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:41:46: required from here 41 | xiEst = LamPhi * ldlt_SigmaYi.solve(yVec - muVec) ;// LamPhiSig * (yVec - muVec); | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:86:7: required from ‘class Eigen::SolveImpl, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::Dense>’ 86 | class SolveImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:62:7: required from ‘class Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >’ 62 | class Solve : public SolveImpl::StorageKind> | ^~~~~ GetIndCEScoresCPPnewInd.cpp:41:38: required from here 41 | xiEst = LamPhi * ldlt_SigmaYi.solve(yVec - muVec) ;// LamPhiSig * (yVec - muVec); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0, 7>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ GetIndCEScoresCPPnewInd.cpp:41:51: required from here 41 | xiEst = LamPhi * ldlt_SigmaYi.solve(yVec - muVec) ;// LamPhiSig * (yVec - muVec); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Matrix > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Matrix > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl, const Eigen::Matrix, Eigen::Dense>’ 94 | class CwiseUnaryOpImpl | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp, const Eigen::Matrix >’ 55 | class CwiseUnaryOp : public CwiseUnaryOpImpl::StorageKind>, internal::no_assignment_operator | ^~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:42:12: required from here 42 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase >, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase >, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl, Eigen::Dense>’ 118 | template class TransposeImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose >’ 52 | template class Transpose | ^~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:42:56: required from here 42 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ~~~~~~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:32:48: required from ‘struct Eigen::internal::accessors_level, 1>, Eigen::Transpose > > >’ 32 | enum { has_direct_access = (traits::Flags & DirectAccessBit) ? 1 : 0, | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 1>, Eigen::Transpose > > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1>, Eigen::Transpose > > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:86:7: required from ‘class Eigen::SolveImpl, 1>, Eigen::Transpose >, Eigen::Dense>’ 86 | class SolveImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:62:7: required from ‘class Eigen::Solve, 1>, Eigen::Transpose > >’ 62 | class Solve : public SolveImpl::StorageKind> | ^~~~~ GetIndCEScoresCPPnewInd.cpp:42:39: required from here 42 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 1>, Eigen::Transpose > >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 1>, Eigen::Transpose > > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1>, Eigen::Transpose > > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:86:7: required from ‘class Eigen::SolveImpl, 1>, Eigen::Transpose >, Eigen::Dense>’ 86 | class SolveImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:62:7: required from ‘class Eigen::Solve, 1>, Eigen::Transpose > >’ 62 | class Solve : public SolveImpl::StorageKind> | ^~~~~ GetIndCEScoresCPPnewInd.cpp:42:39: required from here 42 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0, 8>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ GetIndCEScoresCPPnewInd.cpp:42:58: required from here 42 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 0>, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 0>, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Diagonal.h:63:53: required from ‘class Eigen::Diagonal, 0>’ 63 | template class Diagonal | ^~~~~~~~ GetIndCEScoresCPPnewInd.cpp:43:17: required from here 43 | xiVar.diagonal() += lamVec; | ~~~~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0, 8>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ GetIndCEScoresCPPnewInd.cpp:44:30: required from here 44 | fittedY = newMu + newPhi * xiEst; | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0>, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:44:30: required from here 44 | fittedY = newMu + newPhi * xiEst; | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Matrix > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Matrix > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl, const Eigen::Matrix, Eigen::Dense>’ 94 | class CwiseUnaryOpImpl | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp, const Eigen::Matrix >’ 55 | class CwiseUnaryOp : public CwiseUnaryOpImpl::StorageKind>, internal::no_assignment_operator | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:679:37: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 679 | RealScalar scale = matrix.cwiseAbs().template maxCoeff(); | ~~~~~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Matrix > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Matrix > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp, const Eigen::Matrix >’ 60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp >::type, internal::no_assignment_operator | ^~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28: required from ‘struct Eigen::internal::traits, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix > > >’ 38 | >::type Scalar; | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:691:29: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 691 | m_scaledMatrix = matrix / scale; | ~~~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix > > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix > > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:691:29: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 691 | m_scaledMatrix = matrix / scale; | ~~~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, -1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, -1, -1, false>, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, -1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, -1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, -1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, -1, -1, false, true>’ 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from ‘class Eigen::BlockImpl, -1, -1, false, Eigen::Dense>’ 154 | class BlockImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block, -1, -1, false>’ 103 | template class Block | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:697:32: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 697 | m_workMatrix = matrix.block(0,0,m_diagSize,m_diagSize) / scale; | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Block, -1, -1, false>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Block, -1, -1, false>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Block, -1, -1, false>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Block, -1, -1, false>, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Block, -1, -1, false>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:697:60: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 697 | m_workMatrix = matrix.block(0,0,m_diagSize,m_diagSize) / scale; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 0>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Matrix >, 0> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Matrix >, 0> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Diagonal.h:63:53: required from ‘class Eigen::Diagonal, const Eigen::Matrix >, 0>’ 63 | template class Diagonal | ^~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:705:61: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 705 | RealScalar maxDiagEntry = m_workMatrix.cwiseAbs().diagonal().maxCoeff(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, true>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, true>, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, true>, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, true> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, 1, true> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, -1, 1, true, true>’ 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from ‘class Eigen::BlockImpl, -1, 1, true, Eigen::Dense>’ 154 | class BlockImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block, -1, 1, true>’ 103 | template class Block | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:758:35: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 758 | if(computeU()) m_matrixU.col(i) *= m_workMatrix.coeff(i,i)/a; | ~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Block, -1, 1, true> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Block, -1, 1, true> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Block, -1, 1, true> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl, const Eigen::Block, -1, 1, true>, Eigen::Dense>’ 94 | class CwiseUnaryOpImpl | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true> >’ 55 | class CwiseUnaryOp : public CwiseUnaryOpImpl::StorageKind>, internal::no_assignment_operator | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:765:62: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 765 | if(computeU() && (a::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, false>, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, false>, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, 1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, 1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from ‘class Eigen::BlockImpl, -1, 1, false, Eigen::Dense>’ 154 | class BlockImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block, -1, 1, false>’ 103 | template class Block | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/VectorBlock.h:56:47: required from ‘class Eigen::VectorBlock, -1>’ 56 | template class VectorBlock | ^~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:777:65: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 777 | RealScalar maxRemainingSingularValue = m_singularValues.tail(m_diagSize-i).maxCoeff(&pos); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, false>, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, false>, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, true>, -1, 1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, 1, true>, -1, 1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, 1, true>, -1, 1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from ‘class Eigen::BlockImpl, -1, 1, true>, -1, 1, false, Eigen::Dense>’ 154 | class BlockImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block, -1, 1, true>, -1, 1, false>’ 103 | template class Block | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/VectorBlock.h:56:47: required from ‘class Eigen::VectorBlock, -1, 1, true>, -1>’ 56 | template class VectorBlock | ^~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:514:43: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 514 | abs_col_sum = m_matrix.col(col).tail(size - col).template lpNorm<1>() + m_matrix.row(col).head(col).template lpNorm<1>(); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:39:52: required from here 39 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 1, -1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1, -1, false>, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 1, -1, false>, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 1, -1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1, -1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, 1, -1, false, true>’ 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from ‘class Eigen::BlockImpl, 1, -1, false, Eigen::Dense>’ 154 | class BlockImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block, 1, -1, false>’ 103 | template class Block | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:514:91: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 514 | abs_col_sum = m_matrix.col(col).tail(size - col).template lpNorm<1>() + m_matrix.row(col).head(col).template lpNorm<1>(); | ~~~~~~~~~~~~^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:39:52: required from here 39 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 1, -1, false>, 1, -1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1, -1, false>, 1, -1, false>, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 1, -1, false>, 1, -1, false>, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 1, -1, false>, 1, -1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1, -1, false>, 1, -1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 1, -1, false>, 1, -1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from ‘class Eigen::BlockImpl, 1, -1, false>, 1, -1, false, Eigen::Dense>’ 154 | class BlockImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block, 1, -1, false>, 1, -1, false>’ 103 | template class Block | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/VectorBlock.h:56:47: required from ‘class Eigen::VectorBlock, 1, -1, false>, -1>’ 56 | template class VectorBlock | ^~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:514:101: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 514 | abs_col_sum = m_matrix.col(col).tail(size - col).template lpNorm<1>() + m_matrix.row(col).head(col).template lpNorm<1>(); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:39:52: required from here 39 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, -1, false> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, -1, -1, false> >, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, -1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, -1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl, -1, -1, false>, Eigen::Dense>’ 118 | template class TransposeImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose, -1, -1, false> >’ 52 | template class Transpose | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/TriangularMatrix.h:175:44: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/TriangularMatrix.h:345:58: required from ‘class Eigen::TriangularViewImpl, -1, -1, false> >, 1, Eigen::Dense>’ 345 | template class TriangularViewImpl<_MatrixType,_Mode,Dense> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/TriangularMatrix.h:187:58: required from ‘class Eigen::TriangularView, -1, -1, false> >, 1>’ 187 | template class TriangularView | ^~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:231:121: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 231 | svd.m_workMatrix = m_qr.matrixQR().block(0,0,matrix.rows(),matrix.rows()).template triangularView().adjoint(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/misc/RealSvd2x2.h:25:26: required from ‘void Eigen::internal::real_2x2_jacobi_svd(const MatrixType&, Index, Index, Eigen::JacobiRotation*, Eigen::JacobiRotation*) [with MatrixType = Eigen::Matrix; RealScalar = double; Index = long int]’ 25 | Matrix m; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:730:42: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 730 | internal::real_2x2_jacobi_svd(m_workMatrix, p, q, &j_left, &j_right); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::Matrix > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, Eigen::Matrix > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp, Eigen::Matrix >’ 60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp >::type, internal::no_assignment_operator | ^~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/SelfCwiseBinaryOp.h:20:67: required from ‘Derived& Eigen::DenseBase::operator*=(const Scalar&) [with Derived = Eigen::Block, -1, 1, true>; Scalar = double]’ 20 | internal::call_assignment(this->derived(), PlainObject::Constant(rows(),cols(),other), internal::mul_assign_op()); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:758:39: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 758 | if(computeU()) m_matrixU.col(i) *= m_workMatrix.coeff(i,i)/a; | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>, -1, 1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 0>, -1, 1, false>, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 0>, -1, 1, false>, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0>, -1, 1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0>, -1, 1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0>, -1, 1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block, 0>, -1, 1, false>’ 103 | template class Block | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/VectorBlock.h:56:47: required from ‘class Eigen::VectorBlock, 0>, -1>’ 56 | template class VectorBlock | ^~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:325:26: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 325 | mat.diagonal().tail(size-k).cwiseAbs().maxCoeff(&index_of_biggest_in_corner); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 526 | m_info = internal::ldlt_inplace::unblocked(m_matrix, m_transpositions, m_temporary, m_sign) ? Success : NumericalIssue; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:39:52: required from here 39 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Block, 0>, -1, 1, false> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Block, 0>, -1, 1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Block, 0>, -1, 1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl, const Eigen::Block, 0>, -1, 1, false>, Eigen::Dense>’ 94 | class CwiseUnaryOpImpl | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp, const Eigen::Block, 0>, -1, 1, false> >’ 55 | class CwiseUnaryOp : public CwiseUnaryOpImpl::StorageKind>, internal::no_assignment_operator | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:325:43: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 325 | mat.diagonal().tail(size-k).cwiseAbs().maxCoeff(&index_of_biggest_in_corner); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 526 | m_info = internal::ldlt_inplace::unblocked(m_matrix, m_transpositions, m_temporary, m_sign) ? Success : NumericalIssue; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:39:52: required from here 39 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, false>, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, false>, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, 1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, 1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from ‘class Eigen::BlockImpl, -1, 1, false, Eigen::Dense>’ 154 | class BlockImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block, -1, 1, false>’ 103 | template class Block | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:352:35: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 352 | Block A21(mat,k+1,k,rs,1); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 526 | m_info = internal::ldlt_inplace::unblocked(m_matrix, m_transpositions, m_temporary, m_sign) ? Success : NumericalIssue; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:39:52: required from here 39 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, -1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, -1, -1, false>, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, -1, -1, false>, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, -1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, -1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, -1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from ‘class Eigen::BlockImpl, -1, -1, false, Eigen::Dense>’ 154 | class BlockImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block, -1, -1, false>’ 103 | template class Block | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:354:41: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 354 | Block A20(mat,k+1,0,rs,k); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 526 | m_info = internal::ldlt_inplace::unblocked(m_matrix, m_transpositions, m_temporary, m_sign) ? Success : NumericalIssue; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:39:52: required from here 39 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 1, -1, false> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, 1, -1, false> >, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 1, -1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1, -1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl, 1, -1, false>, Eigen::Dense>’ 118 | template class TransposeImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose, 1, -1, false> >’ 52 | template class Transpose | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:358:80: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 358 | temp.head(k) = mat.diagonal().real().head(k).asDiagonal() * A10.adjoint(); | ~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 526 | m_info = internal::ldlt_inplace::unblocked(m_matrix, m_transpositions, m_temporary, m_sign) ? Success : NumericalIssue; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:39:52: required from here 39 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>, -1, 1, false> >, Eigen::Transpose, 1, -1, false> >, 1>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0>, -1, 1, false> >, Eigen::Transpose, 1, -1, false> >, 1> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0>, -1, 1, false> >, Eigen::Transpose, 1, -1, false> >, 1> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base, 0>, -1, 1, false> >, Eigen::Transpose, 1, -1, false> >, 1, 7>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl, 0>, -1, 1, false> >, Eigen::Transpose, 1, -1, false> >, 1, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, 0>, -1, 1, false> >, Eigen::Transpose, 1, -1, false> >, 1>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:358:67: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 358 | temp.head(k) = mat.diagonal().real().head(k).asDiagonal() * A10.adjoint(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 526 | m_info = internal::ldlt_inplace::unblocked(m_matrix, m_transpositions, m_temporary, m_sign) ? Success : NumericalIssue; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:39:52: required from here 39 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 1, -1, false>, Eigen::Block, -1, 1, false>, 0>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 1, -1, false>, Eigen::Block, -1, 1, false>, 0> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1, -1, false>, Eigen::Block, -1, 1, false>, 0> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:126:7: required from ‘class Eigen::internal::dense_product_base, 1, -1, false>, Eigen::Block, -1, 1, false>, 0, 6>’ 126 | class dense_product_base | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl, 1, -1, false>, Eigen::Block, -1, 1, false>, 0, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, 1, -1, false>, Eigen::Block, -1, 1, false>, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:359:35: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 359 | mat.coeffRef(k,k) -= (A10 * temp.head(k)).value(); | ~~~~~^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 526 | m_info = internal::ldlt_inplace::unblocked(m_matrix, m_transpositions, m_temporary, m_sign) ? Success : NumericalIssue; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:39:52: required from here 39 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:179:81: required from ‘class Eigen::DenseBase, 1, -1, false>, Eigen::Block, -1, 1, false>, 0> >’ 179 | typedef typename internal::find_best_packet::type PacketScalar; | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1, -1, false>, Eigen::Block, -1, 1, false>, 0> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:126:7: required from ‘class Eigen::internal::dense_product_base, 1, -1, false>, Eigen::Block, -1, 1, false>, 0, 6>’ 126 | class dense_product_base | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl, 1, -1, false>, Eigen::Block, -1, 1, false>, 0, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, 1, -1, false>, Eigen::Block, -1, 1, false>, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:359:35: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 359 | mat.coeffRef(k,k) -= (A10 * temp.head(k)).value(); | ~~~~~^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 526 | m_info = internal::ldlt_inplace::unblocked(m_matrix, m_transpositions, m_temporary, m_sign) ? Success : NumericalIssue; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:39:52: required from here 39 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, -1, false>, Eigen::Block, -1, 1, false>, 0> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, -1, false>, Eigen::Block, -1, 1, false>, 0> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base, -1, -1, false>, Eigen::Block, -1, 1, false>, 0, 7>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl, -1, -1, false>, Eigen::Block, -1, 1, false>, 0, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:361:32: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 361 | A21.noalias() -= A20 * temp.head(k); | ~~~~^~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 526 | m_info = internal::ldlt_inplace::unblocked(m_matrix, m_transpositions, m_temporary, m_sign) ? Success : NumericalIssue; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:39:52: required from here 39 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, false> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, false> >, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, false> >, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, true>, -1, 1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase, -1, 1, true>, -1, 1, false> > >’ 39 | template class ArrayBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from ‘class Eigen::ArrayWrapper, -1, 1, true>, -1, 1, false> >’ 42 | class ArrayWrapper : public ArrayBase > | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:379:56: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 379 | ret = ret && (mat.col(j).tail(size-j-1).array()==Scalar(0)).all(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 526 | m_info = internal::ldlt_inplace::unblocked(m_matrix, m_transpositions, m_temporary, m_sign) ? Success : NumericalIssue; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:39:52: required from here 39 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::Array >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::Array > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase, Eigen::Array > >’ 39 | template class ArrayBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp, Eigen::Array >’ 60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp >::type, internal::no_assignment_operator | ^~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28: required from ‘struct Eigen::internal::traits, const Eigen::ArrayWrapper, -1, 1, true>, -1, 1, false> >, const Eigen::CwiseNullaryOp, Eigen::Array > > >’ 38 | >::type Scalar; | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::ArrayWrapper, -1, 1, true>, -1, 1, false> >, const Eigen::CwiseNullaryOp, Eigen::Array >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, -1, 1, true>, -1, 1, false> >, const Eigen::CwiseNullaryOp, Eigen::Array > >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:379:58: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 379 | ret = ret && (mat.col(j).tail(size-j-1).array()==Scalar(0)).all(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 526 | m_info = internal::ldlt_inplace::unblocked(m_matrix, m_transpositions, m_temporary, m_sign) ? Success : NumericalIssue; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:39:52: required from here 39 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, false> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, false> >, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, false> >, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase, -1, 1, false> > >’ 39 | template class ArrayBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from ‘class Eigen::ArrayWrapper, -1, 1, false> >’ 42 | class ArrayWrapper : public ArrayBase > | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:387:32: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 387 | ret = ret && (A21.array()==Scalar(0)).all(); | ~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 526 | m_info = internal::ldlt_inplace::unblocked(m_matrix, m_transpositions, m_temporary, m_sign) ? Success : NumericalIssue; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:39:52: required from here 39 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, false>, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, 1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, 1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block, -1, 1, false>’ 103 | template class Block | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:304:59: required from ‘void Eigen::HouseholderSequence::evalTo(Dest&, Workspace&) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 304 | .applyHouseholderOnTheRight(essentialVector(k), m_coeffs.coeff(k), workspace.data()); | ~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:232:56: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 232 | if(svd.m_computeFullV) m_qr.householderQ().evalTo(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, false>, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, 1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, 1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, -1, 1, false, true>’ 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/VectorBlock.h:56:47: required from ‘class Eigen::VectorBlock, -1>’ 56 | template class VectorBlock | ^~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:82: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 1, 2, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1, 2, false>, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 1, 2, false>, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 1, 2, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1, 2, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 1, 2, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block, 1, 2, false>’ 103 | template class Block | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Jacobi/Jacobi.h:297:10: required from ‘void Eigen::MatrixBase::applyOnTheLeft(Eigen::Index, Eigen::Index, const Eigen::JacobiRotation&) [with OtherScalar = double; Derived = Eigen::Matrix; Eigen::Index = long int]’ 297 | RowXpr x(this->row(p)); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/misc/RealSvd2x2.h:46:19: required from ‘void Eigen::internal::real_2x2_jacobi_svd(const MatrixType&, Index, Index, Eigen::JacobiRotation*, Eigen::JacobiRotation*) [with MatrixType = Eigen::Matrix; RealScalar = double; Index = long int]’ 46 | m.applyOnTheLeft(0,1,rot1); | ~~~~~~~~~~~~~~~~^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:730:42: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 730 | internal::real_2x2_jacobi_svd(m_workMatrix, p, q, &j_left, &j_right); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:179:81: required from ‘class Eigen::DenseBase, 1, 2, false> >’ 179 | typedef typename internal::find_best_packet::type PacketScalar; | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1, 2, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 1, 2, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: required from ‘class Eigen::MapBase, 1, 2, false>, 1>’ 223 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block, 1, 2, false>’ 103 | template class Block | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Jacobi/Jacobi.h:297:10: required from ‘void Eigen::MatrixBase::applyOnTheLeft(Eigen::Index, Eigen::Index, const Eigen::JacobiRotation&) [with OtherScalar = double; Derived = Eigen::Matrix; Eigen::Index = long int]’ 297 | RowXpr x(this->row(p)); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/misc/RealSvd2x2.h:46:19: required from ‘void Eigen::internal::real_2x2_jacobi_svd(const MatrixType&, Index, Index, Eigen::JacobiRotation*, Eigen::JacobiRotation*) [with MatrixType = Eigen::Matrix; RealScalar = double; Index = long int]’ 46 | m.applyOnTheLeft(0,1,rot1); | ~~~~~~~~~~~~~~~~^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:730:42: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 730 | internal::real_2x2_jacobi_svd(m_workMatrix, p, q, &j_left, &j_right); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:277: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 1, -1, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Jacobi/Jacobi.h:475:5: required from ‘void Eigen::internal::apply_rotation_in_the_plane(Eigen::DenseBase&, Eigen::DenseBase&, const Eigen::JacobiRotation&) [with VectorX = Eigen::Block, 1, -1, false>; VectorY = Eigen::Block, 1, -1, false>; OtherScalar = double]’ 475 | EIGEN_PLAIN_ENUM_MIN(evaluator::Alignment, evaluator::Alignment), | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Jacobi/Jacobi.h:299:40: required from ‘void Eigen::MatrixBase::applyOnTheLeft(Eigen::Index, Eigen::Index, const Eigen::JacobiRotation&) [with OtherScalar = double; Derived = Eigen::Matrix; Eigen::Index = long int]’ 299 | internal::apply_rotation_in_the_plane(x, y, j); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:733:40: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 733 | m_workMatrix.applyOnTheLeft(p,q,j_left); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, 1, true> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Jacobi/Jacobi.h:475:5: required from ‘void Eigen::internal::apply_rotation_in_the_plane(Eigen::DenseBase&, Eigen::DenseBase&, const Eigen::JacobiRotation&) [with VectorX = Eigen::Block, -1, 1, true>; VectorY = Eigen::Block, -1, 1, true>; OtherScalar = double]’ 475 | EIGEN_PLAIN_ENUM_MIN(evaluator::Alignment, evaluator::Alignment), | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Jacobi/Jacobi.h:315:40: required from ‘void Eigen::MatrixBase::applyOnTheRight(Eigen::Index, Eigen::Index, const Eigen::JacobiRotation&) [with OtherScalar = double; Derived = Eigen::Matrix; Eigen::Index = long int]’ 315 | internal::apply_rotation_in_the_plane(x, y, j.transpose()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:734:53: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 734 | if(computeU()) m_matrixU.applyOnTheRight(p,q,j_left.transpose()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Block, -1, 1, true>, -1, 1, false> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Block, -1, 1, true>, -1, 1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Block, -1, 1, true>, -1, 1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl, const Eigen::Block, -1, 1, true>, -1, 1, false>, Eigen::Dense>’ 94 | class CwiseUnaryOpImpl | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true>, -1, 1, false> >’ 55 | class CwiseUnaryOp : public CwiseUnaryOpImpl::StorageKind>, internal::no_assignment_operator | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:221:22: required from ‘static typename Eigen::NumTraits::Scalar>::Real Eigen::internal::lpNorm_selector::run(const Eigen::MatrixBase&) [with Derived = Eigen::Block, -1, 1, true>, -1, 1, false>; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]’ 221 | return m.cwiseAbs().sum(); | ~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:269:52: required from ‘typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::lpNorm() const [with int p = 1; Derived = Eigen::Block, -1, 1, true>, -1, 1, false>; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]’ 269 | return internal::lpNorm_selector::run(*this); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:514:74: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 514 | abs_col_sum = m_matrix.col(col).tail(size - col).template lpNorm<1>() + m_matrix.row(col).head(col).template lpNorm<1>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:39:52: required from here 39 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Block, 1, -1, false>, 1, -1, false> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Block, 1, -1, false>, 1, -1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Block, 1, -1, false>, 1, -1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl, const Eigen::Block, 1, -1, false>, 1, -1, false>, Eigen::Dense>’ 94 | class CwiseUnaryOpImpl | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp, const Eigen::Block, 1, -1, false>, 1, -1, false> >’ 55 | class CwiseUnaryOp : public CwiseUnaryOpImpl::StorageKind>, internal::no_assignment_operator | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:221:22: required from ‘static typename Eigen::NumTraits::Scalar>::Real Eigen::internal::lpNorm_selector::run(const Eigen::MatrixBase&) [with Derived = Eigen::Block, 1, -1, false>, 1, -1, false>; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]’ 221 | return m.cwiseAbs().sum(); | ~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:269:52: required from ‘typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::lpNorm() const [with int p = 1; Derived = Eigen::Block, 1, -1, false>, 1, -1, false>; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]’ 269 | return internal::lpNorm_selector::run(*this); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:514:125: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 514 | abs_col_sum = m_matrix.col(col).tail(size - col).template lpNorm<1>() + m_matrix.row(col).head(col).template lpNorm<1>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:39:52: required from here 39 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase >’ 39 | template class ArrayBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array’ 45 | class Array | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/../plugins/ArrayCwiseBinaryOps.h:219:1: required from ‘const Eigen::ArrayBase::CmpEQReturnType Eigen::ArrayBase::operator==(const Scalar&) const [with Derived = Eigen::ArrayWrapper, -1, 1, true>, -1, 1, false> >; CmpEQReturnType = Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, -1, 1, true>, -1, 1, false> >, const Eigen::CwiseNullaryOp, Eigen::Array > >; Scalar = double]’ 145 | return this->OP(Derived::PlainObject::Constant(rows(), cols(), s)); \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:379:58: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 379 | ret = ret && (mat.col(j).tail(size-j-1).array()==Scalar(0)).all(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 526 | m_info = internal::ldlt_inplace::unblocked(m_matrix, m_transpositions, m_temporary, m_sign) ? Success : NumericalIssue; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:39:52: required from here 39 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, 1, true>, -1, 1, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1384:41: required from ‘struct Eigen::internal::evaluator_wrapper_base, -1, 1, true>, -1, 1, false> > >’ 1384 | CoeffReadCost = evaluator::CoeffReadCost, | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1464:8: required from ‘struct Eigen::internal::unary_evaluator, -1, 1, true>, -1, 1, false> >, Eigen::internal::IndexBased, double>’ 1464 | struct unary_evaluator > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator, -1, 1, true>, -1, 1, false> > >’ 90 | struct evaluator : public unary_evaluator | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, -1, 1, true>, -1, 1, false> > >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:41: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::ArrayWrapper, -1, 1, true>, -1, 1, false> >, const Eigen::CwiseNullaryOp, Eigen::Array > >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ 739 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8: required from ‘struct Eigen::internal::evaluator, const Eigen::ArrayWrapper, -1, 1, true>, -1, 1, false> >, const Eigen::CwiseNullaryOp, Eigen::Array > > >’ 722 | struct evaluator > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/BooleanRedux.h:84:50: required from ‘bool Eigen::DenseBase::all() const [with Derived = Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, -1, 1, true>, -1, 1, false> >, const Eigen::CwiseNullaryOp, Eigen::Array > >]’ 84 | && SizeAtCompileTime * (int(Evaluator::CoeffReadCost) + int(NumTraits::AddCost)) <= EIGEN_UNROLLING_LIMIT | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:379:74: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 379 | ret = ret && (mat.col(j).tail(size-j-1).array()==Scalar(0)).all(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 526 | m_info = internal::ldlt_inplace::unblocked(m_matrix, m_transpositions, m_temporary, m_sign) ? Success : NumericalIssue; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:39:52: required from here 39 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, 1, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1384:41: required from ‘struct Eigen::internal::evaluator_wrapper_base, -1, 1, false> > >’ 1384 | CoeffReadCost = evaluator::CoeffReadCost, | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1464:8: required from ‘struct Eigen::internal::unary_evaluator, -1, 1, false> >, Eigen::internal::IndexBased, double>’ 1464 | struct unary_evaluator > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator, -1, 1, false> > >’ 90 | struct evaluator : public unary_evaluator | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, -1, 1, false> > >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:41: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::ArrayWrapper, -1, 1, false> >, const Eigen::CwiseNullaryOp, Eigen::Array > >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ 739 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8: required from ‘struct Eigen::internal::evaluator, const Eigen::ArrayWrapper, -1, 1, false> >, const Eigen::CwiseNullaryOp, Eigen::Array > > >’ 722 | struct evaluator > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/BooleanRedux.h:84:50: required from ‘bool Eigen::DenseBase::all() const [with Derived = Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, -1, 1, false> >, const Eigen::CwiseNullaryOp, Eigen::Array > >]’ 84 | && SizeAtCompileTime * (int(Evaluator::CoeffReadCost) + int(NumTraits::AddCost)) <= EIGEN_UNROLLING_LIMIT | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:387:50: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 387 | ret = ret && (A21.array()==Scalar(0)).all(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 526 | m_info = internal::ldlt_inplace::unblocked(m_matrix, m_transpositions, m_temporary, m_sign) ? Success : NumericalIssue; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:39:52: required from here 39 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 1, -1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1, -1, false>, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 1, -1, false>, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 1, -1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1, -1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 1, -1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/QR/ColPivHouseholderQR.h:521:73: required from ‘void Eigen::ColPivHouseholderQR::computeInPlace() [with _MatrixType = Eigen::Matrix]’ 521 | RealScalar biggest_col_sq_norm = numext::abs2(m_colNormsUpdated.tail(cols-k).maxCoeff(&biggest_col_index)); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/QR/ColPivHouseholderQR.h:477:3: required from ‘Eigen::ColPivHouseholderQR<_MatrixType>& Eigen::ColPivHouseholderQR::compute(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix]’ 477 | computeInPlace(); | ^~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:229:19: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 229 | m_qr.compute(m_adjoint); | ~~~~~~~~~~~~^~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, -1, false>, -1, -1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, -1, -1, false>, -1, -1, false>, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, -1, -1, false>, -1, -1, false>, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, -1, false>, -1, -1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, -1, false>, -1, -1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, -1, false>, -1, -1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/Householder.h:166:82: required from ‘void Eigen::MatrixBase::applyHouseholderOnTheRight(const EssentialPart&, const Scalar&, Scalar*) [with EssentialPart = Eigen::Block, -1, 1, false>; Derived = Eigen::Block, -1, -1, false>; Scalar = double]’ 166 | Block right(derived(), 0, 1, rows(), cols()-1); | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:304:43: required from ‘void Eigen::HouseholderSequence::evalTo(Dest&, Workspace&) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 303 | dst.bottomRightCorner(cornerSize, cornerSize) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 | .applyHouseholderOnTheRight(essentialVector(k), m_coeffs.coeff(k), workspace.data()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:232:56: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 232 | if(svd.m_computeFullV) m_qr.householderQ().evalTo(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, -1, false>, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, -1, false>, -1, -1, false>, Eigen::Block, -1, 1, false>, 0> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, -1, false>, -1, -1, false>, Eigen::Block, -1, 1, false>, 0> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base, -1, -1, false>, -1, -1, false>, Eigen::Block, -1, 1, false>, 0, 7>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl, -1, -1, false>, -1, -1, false>, Eigen::Block, -1, 1, false>, 0, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, -1, -1, false>, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/Householder.h:167:27: required from ‘void Eigen::MatrixBase::applyHouseholderOnTheRight(const EssentialPart&, const Scalar&, Scalar*) [with EssentialPart = Eigen::Block, -1, 1, false>; Derived = Eigen::Block, -1, -1, false>; Scalar = double]’ 167 | tmp.noalias() = right * essential; | ~~~~~~^~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:304:43: required from ‘void Eigen::HouseholderSequence::evalTo(Dest&, Workspace&) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 303 | dst.bottomRightCorner(cornerSize, cornerSize) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 | .applyHouseholderOnTheRight(essentialVector(k), m_coeffs.coeff(k), workspace.data()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:232:56: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 232 | if(svd.m_computeFullV) m_qr.householderQ().evalTo(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, -1, false>, -1, 1, true>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, -1, -1, false>, -1, 1, true>, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, -1, -1, false>, -1, 1, true>, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, -1, false>, -1, 1, true> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, -1, false>, -1, 1, true> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, -1, false>, -1, 1, true>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/Householder.h:168:21: required from ‘void Eigen::MatrixBase::applyHouseholderOnTheRight(const EssentialPart&, const Scalar&, Scalar*) [with EssentialPart = Eigen::Block, -1, 1, false>; Derived = Eigen::Block, -1, -1, false>; Scalar = double]’ 168 | tmp += this->col(0); | ~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:304:43: required from ‘void Eigen::HouseholderSequence::evalTo(Dest&, Workspace&) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 303 | dst.bottomRightCorner(cornerSize, cornerSize) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 | .applyHouseholderOnTheRight(essentialVector(k), m_coeffs.coeff(k), workspace.data()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:232:56: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 232 | if(svd.m_computeFullV) m_qr.householderQ().evalTo(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Matrix > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Matrix > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp, const Eigen::Matrix >’ 60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp >::type, internal::no_assignment_operator | ^~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28: required from ‘struct Eigen::internal::traits, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >’ 38 | >::type Scalar; | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/Householder.h:169:25: required from ‘void Eigen::MatrixBase::applyHouseholderOnTheRight(const EssentialPart&, const Scalar&, Scalar*) [with EssentialPart = Eigen::Block, -1, 1, false>; Derived = Eigen::Block, -1, -1, false>; Scalar = double]’ 169 | this->col(0) -= tau * tmp; | ~~~~^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:304:43: required from ‘void Eigen::HouseholderSequence::evalTo(Dest&, Workspace&) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 303 | dst.bottomRightCorner(cornerSize, cornerSize) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 | .applyHouseholderOnTheRight(essentialVector(k), m_coeffs.coeff(k), workspace.data()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:232:56: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 232 | if(svd.m_computeFullV) m_qr.householderQ().evalTo(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 0, Eigen::Stride<0, 0> >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/Householder.h:169:25: required from ‘void Eigen::MatrixBase::applyHouseholderOnTheRight(const EssentialPart&, const Scalar&, Scalar*) [with EssentialPart = Eigen::Block, -1, 1, false>; Derived = Eigen::Block, -1, -1, false>; Scalar = double]’ 169 | this->col(0) -= tau * tmp; | ~~~~^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:304:43: required from ‘void Eigen::HouseholderSequence::evalTo(Dest&, Workspace&) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 303 | dst.bottomRightCorner(cornerSize, cornerSize) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 | .applyHouseholderOnTheRight(essentialVector(k), m_coeffs.coeff(k), workspace.data()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:232:56: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 232 | if(svd.m_computeFullV) m_qr.householderQ().evalTo(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, false> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, false> >, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, 1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl, -1, 1, false>, Eigen::Dense>’ 118 | template class TransposeImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose, -1, 1, false> >’ 52 | template class Transpose | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/Householder.h:170:53: required from ‘void Eigen::MatrixBase::applyHouseholderOnTheRight(const EssentialPart&, const Scalar&, Scalar*) [with EssentialPart = Eigen::Block, -1, 1, false>; Derived = Eigen::Block, -1, -1, false>; Scalar = double]’ 170 | right.noalias() -= tau * tmp * essential.adjoint(); | ~~~~~~~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:304:43: required from ‘void Eigen::HouseholderSequence::evalTo(Dest&, Workspace&) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 303 | dst.bottomRightCorner(cornerSize, cornerSize) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 | .applyHouseholderOnTheRight(essentialVector(k), m_coeffs.coeff(k), workspace.data()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:232:56: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 232 | if(svd.m_computeFullV) m_qr.householderQ().evalTo(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::Transpose, -1, 1, false> >, 0>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::Transpose, -1, 1, false> >, 0> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::Transpose, -1, 1, false> >, 0> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::Transpose, -1, 1, false> >, 0, 5>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::Transpose, -1, 1, false> >, 0, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::Transpose, -1, 1, false> >, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/Householder.h:170:34: required from ‘void Eigen::MatrixBase::applyHouseholderOnTheRight(const EssentialPart&, const Scalar&, Scalar*) [with EssentialPart = Eigen::Block, -1, 1, false>; Derived = Eigen::Block, -1, -1, false>; Scalar = double]’ 170 | right.noalias() -= tau * tmp * essential.adjoint(); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:304:43: required from ‘void Eigen::HouseholderSequence::evalTo(Dest&, Workspace&) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 303 | dst.bottomRightCorner(cornerSize, cornerSize) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 | .applyHouseholderOnTheRight(essentialVector(k), m_coeffs.coeff(k), workspace.data()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:232:56: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 232 | if(svd.m_computeFullV) m_qr.householderQ().evalTo(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/Householder.h:127:63: required from ‘void Eigen::MatrixBase::applyHouseholderOnTheLeft(const EssentialPart&, const Scalar&, Scalar*) [with EssentialPart = Eigen::Block, -1, 1, false>; Derived = Eigen::Block, -1, -1, false>; Scalar = double]’ 127 | Map::type> tmp(workspace,cols()); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:307:42: required from ‘void Eigen::HouseholderSequence::evalTo(Dest&, Workspace&) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 306 | dst.bottomRightCorner(cornerSize, cornerSize) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 | .applyHouseholderOnTheLeft(essentialVector(k), m_coeffs.coeff(k), workspace.data()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:232:56: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 232 | if(svd.m_computeFullV) m_qr.householderQ().evalTo(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, false> >, Eigen::Block, -1, -1, false>, -1, -1, false>, 0>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, false> >, Eigen::Block, -1, -1, false>, -1, -1, false>, 0> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, 1, false> >, Eigen::Block, -1, -1, false>, -1, -1, false>, 0> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base, -1, 1, false> >, Eigen::Block, -1, -1, false>, -1, -1, false>, 0, 7>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl, -1, 1, false> >, Eigen::Block, -1, -1, false>, -1, -1, false>, 0, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, -1, 1, false> >, Eigen::Block, -1, -1, false>, -1, -1, false>, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/Householder.h:129:41: required from ‘void Eigen::MatrixBase::applyHouseholderOnTheLeft(const EssentialPart&, const Scalar&, Scalar*) [with EssentialPart = Eigen::Block, -1, 1, false>; Derived = Eigen::Block, -1, -1, false>; Scalar = double]’ 129 | tmp.noalias() = essential.adjoint() * bottom; | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:307:42: required from ‘void Eigen::HouseholderSequence::evalTo(Dest&, Workspace&) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 306 | dst.bottomRightCorner(cornerSize, cornerSize) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 | .applyHouseholderOnTheLeft(essentialVector(k), m_coeffs.coeff(k), workspace.data()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:232:56: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 232 | if(svd.m_computeFullV) m_qr.householderQ().evalTo(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, -1, false>, 1, -1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, -1, -1, false>, 1, -1, false>, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, -1, -1, false>, 1, -1, false>, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, -1, false>, 1, -1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, -1, false>, 1, -1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, -1, false>, 1, -1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/Householder.h:130:21: required from ‘void Eigen::MatrixBase::applyHouseholderOnTheLeft(const EssentialPart&, const Scalar&, Scalar*) [with EssentialPart = Eigen::Block, -1, 1, false>; Derived = Eigen::Block, -1, -1, false>; Scalar = double]’ 130 | tmp += this->row(0); | ~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:307:42: required from ‘void Eigen::HouseholderSequence::evalTo(Dest&, Workspace&) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 306 | dst.bottomRightCorner(cornerSize, cornerSize) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 | .applyHouseholderOnTheLeft(essentialVector(k), m_coeffs.coeff(k), workspace.data()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:232:56: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 232 | if(svd.m_computeFullV) m_qr.householderQ().evalTo(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Matrix > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Matrix > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp, const Eigen::Matrix >’ 60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp >::type, internal::no_assignment_operator | ^~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28: required from ‘struct Eigen::internal::traits, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >’ 38 | >::type Scalar; | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/Householder.h:131:25: required from ‘void Eigen::MatrixBase::applyHouseholderOnTheLeft(const EssentialPart&, const Scalar&, Scalar*) [with EssentialPart = Eigen::Block, -1, 1, false>; Derived = Eigen::Block, -1, -1, false>; Scalar = double]’ 131 | this->row(0) -= tau * tmp; | ~~~~^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:307:42: required from ‘void Eigen::HouseholderSequence::evalTo(Dest&, Workspace&) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 306 | dst.bottomRightCorner(cornerSize, cornerSize) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 | .applyHouseholderOnTheLeft(essentialVector(k), m_coeffs.coeff(k), workspace.data()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:232:56: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 232 | if(svd.m_computeFullV) m_qr.householderQ().evalTo(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 0, Eigen::Stride<0, 0> >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/Householder.h:131:25: required from ‘void Eigen::MatrixBase::applyHouseholderOnTheLeft(const EssentialPart&, const Scalar&, Scalar*) [with EssentialPart = Eigen::Block, -1, 1, false>; Derived = Eigen::Block, -1, -1, false>; Scalar = double]’ 131 | this->row(0) -= tau * tmp; | ~~~~^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:307:42: required from ‘void Eigen::HouseholderSequence::evalTo(Dest&, Workspace&) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 306 | dst.bottomRightCorner(cornerSize, cornerSize) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 | .applyHouseholderOnTheLeft(essentialVector(k), m_coeffs.coeff(k), workspace.data()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:232:56: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 232 | if(svd.m_computeFullV) m_qr.householderQ().evalTo(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, false> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, false>, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, false> >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/Householder.h:132:29: required from ‘void Eigen::MatrixBase::applyHouseholderOnTheLeft(const EssentialPart&, const Scalar&, Scalar*) [with EssentialPart = Eigen::Block, -1, 1, false>; Derived = Eigen::Block, -1, -1, false>; Scalar = double]’ 132 | bottom.noalias() -= tau * essential * tmp; | ~~~~^~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:307:42: required from ‘void Eigen::HouseholderSequence::evalTo(Dest&, Workspace&) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 306 | dst.bottomRightCorner(cornerSize, cornerSize) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 | .applyHouseholderOnTheLeft(essentialVector(k), m_coeffs.coeff(k), workspace.data()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:232:56: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 232 | if(svd.m_computeFullV) m_qr.householderQ().evalTo(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, false> >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, false> >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, false> >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, false> >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0, 5>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, false> >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, false> >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/Householder.h:132:41: required from ‘void Eigen::MatrixBase::applyHouseholderOnTheLeft(const EssentialPart&, const Scalar&, Scalar*) [with EssentialPart = Eigen::Block, -1, 1, false>; Derived = Eigen::Block, -1, -1, false>; Scalar = double]’ 132 | bottom.noalias() -= tau * essential * tmp; | ~~~~~~~~~~~~~~~~^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:307:42: required from ‘void Eigen::HouseholderSequence::evalTo(Dest&, Workspace&) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 306 | dst.bottomRightCorner(cornerSize, cornerSize) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 | .applyHouseholderOnTheLeft(essentialVector(k), m_coeffs.coeff(k), workspace.data()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:232:56: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 232 | if(svd.m_computeFullV) m_qr.householderQ().evalTo(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, -1, false> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, -1, -1, false> >, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, -1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, -1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl, -1, -1, false>, Eigen::Dense>’ 118 | template class TransposeImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose, -1, -1, false> >’ 52 | template class Transpose | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/TriangularMatrix.h:175:44: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:99:93: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 99 | VectorsType::MaxColsAtCompileTime,MatrixType::MaxColsAtCompileTime> tmp = V.adjoint() * mat; | ~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, -1, false> >, 6>, Eigen::Block, -1, -1, false>, 0>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, -1, false> >, 6>, Eigen::Block, -1, -1, false>, 0> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, -1, false> >, 6>, Eigen::Block, -1, -1, false>, 0> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base, -1, -1, false> >, 6>, Eigen::Block, -1, -1, false>, 0, 8>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl, -1, -1, false> >, 6>, Eigen::Block, -1, -1, false>, 0, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, -1, -1, false> >, 6>, Eigen::Block, -1, -1, false>, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:99:96: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 99 | VectorsType::MaxColsAtCompileTime,MatrixType::MaxColsAtCompileTime> tmp = V.adjoint() * mat; | ~~~~~~~~~~~~^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 2>, Eigen::Matrix, 0>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 2>, Eigen::Matrix, 0> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 2>, Eigen::Matrix, 0> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base, 2>, Eigen::Matrix, 0, 8>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl, 2>, Eigen::Matrix, 0, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, 2>, Eigen::Matrix, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:101:66: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 101 | if(forward) tmp = T.template triangularView() * tmp; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase >, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl, Eigen::Dense>’ 118 | template class TransposeImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose >’ 52 | template class Transpose | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/TriangularMatrix.h:175:44: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:102:63: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 102 | else tmp = T.template triangularView().adjoint() * tmp; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase >, 1>, Eigen::Matrix, 0>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >, 1>, Eigen::Matrix, 0> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >, 1>, Eigen::Matrix, 0> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base >, 1>, Eigen::Matrix, 0, 8>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl >, 1>, Eigen::Matrix, 0, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product >, 1>, Eigen::Matrix, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:102:66: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 102 | else tmp = T.template triangularView().adjoint() * tmp; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, -1, false>, 5>, Eigen::Matrix, 0>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, -1, false>, 5>, Eigen::Matrix, 0> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, -1, false>, 5>, Eigen::Matrix, 0> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base, -1, -1, false>, 5>, Eigen::Matrix, 0, 8>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl, -1, -1, false>, 5>, Eigen::Matrix, 0, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, -1, -1, false>, 5>, Eigen::Matrix, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:103:22: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 103 | mat.noalias() -= V * tmp; | ~~^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::Matrix > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, Eigen::Matrix > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp, Eigen::Matrix >’ 60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp >::type, internal::no_assignment_operator | ^~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:846:33: required from ‘static Derived& Eigen::internal::setIdentity_impl::run(Derived&) [with Derived = Eigen::Matrix; bool Big = false]’ 846 | return m = Derived::Identity(m.rows(), m.cols()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:875:50: required from ‘Derived& Eigen::MatrixBase::setIdentity() [with Derived = Eigen::Matrix]’ 875 | return internal::setIdentity_impl::run(derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:892:21: required from ‘Derived& Eigen::MatrixBase::setIdentity(Eigen::Index, Eigen::Index) [with Derived = Eigen::Matrix; Eigen::Index = long int]’ 892 | return setIdentity(); | ~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:698:45: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 698 | if(m_computeFullU) m_matrixU.setIdentity(m_rows,m_rows); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 1, 2, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Jacobi/Jacobi.h:475:5: required from ‘void Eigen::internal::apply_rotation_in_the_plane(Eigen::DenseBase&, Eigen::DenseBase&, const Eigen::JacobiRotation&) [with VectorX = Eigen::Block, 1, 2, false>; VectorY = Eigen::Block, 1, 2, false>; OtherScalar = double]’ 475 | EIGEN_PLAIN_ENUM_MIN(evaluator::Alignment, evaluator::Alignment), | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Jacobi/Jacobi.h:299:40: required from ‘void Eigen::MatrixBase::applyOnTheLeft(Eigen::Index, Eigen::Index, const Eigen::JacobiRotation&) [with OtherScalar = double; Derived = Eigen::Matrix; Eigen::Index = long int]’ 299 | internal::apply_rotation_in_the_plane(x, y, j); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/misc/RealSvd2x2.h:46:19: required from ‘void Eigen::internal::real_2x2_jacobi_svd(const MatrixType&, Index, Index, Eigen::JacobiRotation*, Eigen::JacobiRotation*) [with MatrixType = Eigen::Matrix; RealScalar = double; Index = long int]’ 46 | m.applyOnTheLeft(0,1,rot1); | ~~~~~~~~~~~~~~~~^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:730:42: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 730 | internal::real_2x2_jacobi_svd(m_workMatrix, p, q, &j_left, &j_right); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, 1, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Visitor.h:79:51: required from ‘class Eigen::internal::visitor_evaluator, -1, 1, false> >’ 79 | CoeffReadCost = internal::evaluator::CoeffReadCost | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Visitor.h:123:17: required from ‘void Eigen::DenseBase::visit(Visitor&) const [with Visitor = Eigen::internal::max_coeff_visitor, -1, 1, false>, 0>; Derived = Eigen::Block, -1, 1, false>]’ 123 | ThisEvaluator thisEval(derived()); | ^~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Visitor.h:374:14: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::maxCoeff(IndexType*) const [with int NaNPropagation = 0; IndexType = long int; Derived = Eigen::Block, -1, 1, false>; typename Eigen::internal::traits::Scalar = double]’ 374 | this->visit(maxVisitor); | ~~~~~~~~~~~^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:501:37: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::maxCoeff(IndexType*) const [with IndexType = long int; Derived = Eigen::Block, -1, 1, false>; typename Eigen::internal::traits::Scalar = double]’ 501 | return maxCoeff(index); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:777:88: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 777 | RealScalar maxRemainingSingularValue = m_singularValues.tail(m_diagSize-i).maxCoeff(&pos); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:167:44: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:175:24: required from ‘Eigen::ProductImpl::Scalar Eigen::ProductImpl::coeff(Eigen::Index, Eigen::Index) const [with Lhs = Eigen::Block, 1, -1, false>; Rhs = Eigen::Block, -1, 1, false>; int Option = 0; Scalar = double; Eigen::Index = long int]’ 175 | return internal::evaluator(derived()).coeff(row,col); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:530:29: required from ‘Eigen::DenseBase::CoeffReturnType Eigen::DenseBase::value() const [with Derived = Eigen::Product, 1, -1, false>, Eigen::Block, -1, 1, false>, 0>; CoeffReturnType = double]’ 530 | return derived().coeff(0,0); | ~~~~~~~~~~~~~~~^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:359:56: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 359 | mat.coeffRef(k,k) -= (A10 * temp.head(k)).value(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 526 | m_info = internal::ldlt_inplace::unblocked(m_matrix, m_transpositions, m_temporary, m_sign) ? Success : NumericalIssue; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:39:52: required from here 39 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::CwiseUnaryOp, const Eigen::Matrix >; Eigen::Index = long int]’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:243:63: required from ‘static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Evaluator&, const Func&, const XprType&) [with XprType = Eigen::CwiseUnaryOp, const Eigen::Matrix >; Func = Eigen::internal::scalar_max_op; Evaluator = Eigen::internal::redux_evaluator, const Eigen::Matrix > >; Scalar = double]’ 243 | const Index alignedStart = internal::first_default_aligned(xpr); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_max_op; Derived = Eigen::CwiseUnaryOp, const Eigen::Matrix >; typename Eigen::internal::traits::Scalar = double]’ 418 | return internal::redux_impl::run(thisEval, func, derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:448:25: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::maxCoeff() const [with int NaNPropagation = 1; Derived = Eigen::CwiseUnaryOp, const Eigen::Matrix >; typename Eigen::internal::traits::Scalar = double]’ 448 | return derived().redux(Eigen::internal::scalar_max_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:679:71: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 679 | RealScalar scale = matrix.cwiseAbs().template maxCoeff(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 654 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, false>, -1, 1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, false>, -1, 1, false>, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, false>, -1, 1, false>, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, true>, -1, 1, false>, -1, 1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, 1, true>, -1, 1, false>, -1, 1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, 1, true>, -1, 1, false>, -1, 1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/QR/ColPivHouseholderQR.h:540:52: required from ‘void Eigen::ColPivHouseholderQR::computeInPlace() [with _MatrixType = Eigen::Matrix]’ 540 | m_qr.col(k).tail(rows-k).makeHouseholderInPlace(m_hCoeffs.coeffRef(k), beta); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/QR/ColPivHouseholderQR.h:477:3: required from ‘Eigen::ColPivHouseholderQR<_MatrixType>& Eigen::ColPivHouseholderQR::compute(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix]’ 477 | computeInPlace(); | ^~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:229:19: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 229 | m_qr.compute(m_adjoint); | ~~~~~~~~~~~~^~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, false> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, false> >, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, true>, -1, 1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, 1, true>, -1, 1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl, -1, 1, true>, -1, 1, false>, Eigen::Dense>’ 118 | template class TransposeImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/QR/ColPivHouseholderQR.h:550:35: required from ‘void Eigen::ColPivHouseholderQR::computeInPlace() [with _MatrixType = Eigen::Matrix]’ 549 | m_qr.bottomRightCorner(rows-k, cols-k-1) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 550 | .applyHouseholderOnTheLeft(m_qr.col(k).tail(rows-k-1), m_hCoeffs.coeffRef(k), &m_temp.coeffRef(k+1)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/QR/ColPivHouseholderQR.h:477:3: required from ‘Eigen::ColPivHouseholderQR<_MatrixType>& Eigen::ColPivHouseholderQR::compute(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix]’ 477 | computeInPlace(); | ^~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:229:19: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 229 | m_qr.compute(m_adjoint); | ~~~~~~~~~~~~^~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, false> >, Eigen::Block, -1, -1, false>, -1, -1, false>, 0>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, true>, -1, 1, false> >, Eigen::Block, -1, -1, false>, -1, -1, false>, 0> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, 1, true>, -1, 1, false> >, Eigen::Block, -1, -1, false>, -1, -1, false>, 0> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base, -1, 1, true>, -1, 1, false> >, Eigen::Block, -1, -1, false>, -1, -1, false>, 0, 7>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl, -1, 1, true>, -1, 1, false> >, Eigen::Block, -1, -1, false>, -1, -1, false>, 0, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/QR/ColPivHouseholderQR.h:550:35: required from ‘void Eigen::ColPivHouseholderQR::computeInPlace() [with _MatrixType = Eigen::Matrix]’ 549 | m_qr.bottomRightCorner(rows-k, cols-k-1) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 550 | .applyHouseholderOnTheLeft(m_qr.col(k).tail(rows-k-1), m_hCoeffs.coeffRef(k), &m_temp.coeffRef(k+1)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/QR/ColPivHouseholderQR.h:477:3: required from ‘Eigen::ColPivHouseholderQR<_MatrixType>& Eigen::ColPivHouseholderQR::compute(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix]’ 477 | computeInPlace(); | ^~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:229:19: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 229 | m_qr.compute(m_adjoint); | ~~~~~~~~~~~~^~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, true>, -1, 1, false> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, true>, -1, 1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, true>, -1, 1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, true>, -1, 1, false>, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, true>, -1, 1, false> >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/Householder.h:132:29: required from ‘void Eigen::MatrixBase::applyHouseholderOnTheLeft(const EssentialPart&, const Scalar&, Scalar*) [with EssentialPart = Eigen::VectorBlock, -1, 1, true>, -1>; Derived = Eigen::Block, -1, -1, false>; Scalar = double]’ 132 | bottom.noalias() -= tau * essential * tmp; | ~~~~^~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/QR/ColPivHouseholderQR.h:550:35: required from ‘void Eigen::ColPivHouseholderQR::computeInPlace() [with _MatrixType = Eigen::Matrix]’ 549 | m_qr.bottomRightCorner(rows-k, cols-k-1) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 550 | .applyHouseholderOnTheLeft(m_qr.col(k).tail(rows-k-1), m_hCoeffs.coeffRef(k), &m_temp.coeffRef(k+1)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/QR/ColPivHouseholderQR.h:477:3: required from ‘Eigen::ColPivHouseholderQR<_MatrixType>& Eigen::ColPivHouseholderQR::compute(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix]’ 477 | computeInPlace(); | ^~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:229:19: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 229 | m_qr.compute(m_adjoint); | ~~~~~~~~~~~~^~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, true>, -1, 1, false> >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, true>, -1, 1, false> >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, true>, -1, 1, false> >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, true>, -1, 1, false> >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0, 5>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, 1, true>, -1, 1, false> >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/QR/ColPivHouseholderQR.h:550:35: required from ‘void Eigen::ColPivHouseholderQR::computeInPlace() [with _MatrixType = Eigen::Matrix]’ 549 | m_qr.bottomRightCorner(rows-k, cols-k-1) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 550 | .applyHouseholderOnTheLeft(m_qr.col(k).tail(rows-k-1), m_hCoeffs.coeffRef(k), &m_temp.coeffRef(k+1)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/QR/ColPivHouseholderQR.h:477:3: required from ‘Eigen::ColPivHouseholderQR<_MatrixType>& Eigen::ColPivHouseholderQR::compute(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix]’ 477 | computeInPlace(); | ^~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:229:19: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 229 | m_qr.compute(m_adjoint); | ~~~~~~~~~~~~^~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 1, -1, true>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1, -1, true>, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 1, -1, true>, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 1, -1, true> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1, -1, true> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 1, -1, true>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:92:55: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 92 | if(forward) make_block_householder_triangular_factor(T, vectors, hCoeffs); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 1, -1, true>, 1, -1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1, -1, true>, 1, -1, false>, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 1, -1, true>, 1, -1, false>, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 1, -1, true>, 1, -1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1, -1, true>, 1, -1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 1, -1, true>, 1, -1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:92:55: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 92 | if(forward) make_block_householder_triangular_factor(T, vectors, hCoeffs); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, -1, false>, -1, 1, true>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, -1, -1, false>, -1, 1, true>, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, -1, false>, -1, 1, true> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, -1, false>, -1, 1, true> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, -1, false>, -1, 1, true>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, -1, -1, false>, -1, 1, true, true>’ 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:92:55: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 92 | if(forward) make_block_householder_triangular_factor(T, vectors, hCoeffs); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, -1, false>, -1, 1, true>, -1, 1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, -1, -1, false>, -1, 1, true>, -1, 1, false>, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, -1, false>, -1, 1, true>, -1, 1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, -1, false>, -1, 1, true>, -1, 1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, -1, false>, -1, 1, true>, -1, 1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, -1, -1, false>, -1, 1, true>, -1, 1, false, true>’ 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:92:55: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 92 | if(forward) make_block_householder_triangular_factor(T, vectors, hCoeffs); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, -1, false>, -1, 1, true>, -1, 1, false> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, -1, -1, false>, -1, 1, true>, -1, 1, false> >, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, -1, false>, -1, 1, true>, -1, 1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, -1, false>, -1, 1, true>, -1, 1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl, -1, -1, false>, -1, 1, true>, -1, 1, false>, Eigen::Dense>’ 118 | template class TransposeImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:92:55: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 92 | if(forward) make_block_householder_triangular_factor(T, vectors, hCoeffs); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose, -1, -1, false>, -1, 1, true>, -1, 1, false> > >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose, -1, -1, false>, -1, 1, true>, -1, 1, false> > > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose, -1, -1, false>, -1, 1, true>, -1, 1, false> > > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose, -1, -1, false>, -1, 1, true>, -1, 1, false> >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose, -1, -1, false>, -1, 1, true>, -1, 1, false> > >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:63:57: required from ‘void Eigen::internal::make_block_householder_triangular_factor(TriangularFactorType&, const VectorsType&, const CoeffsType&) [with TriangularFactorType = Eigen::Matrix; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 63 | triFactor.row(i).tail(rt).noalias() = -hCoeffs(i) * vectors.col(i).tail(rs).adjoint() | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:92:55: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 92 | if(forward) make_block_householder_triangular_factor(T, vectors, hCoeffs); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, -1, false>, -1, -1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, -1, -1, false>, -1, -1, false>, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, -1, false>, -1, -1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, -1, false>, -1, -1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, -1, false>, -1, -1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, -1, -1, false>, -1, -1, false, true>’ 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:92:55: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 92 | if(forward) make_block_householder_triangular_factor(T, vectors, hCoeffs); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose, -1, -1, false>, -1, 1, true>, -1, 1, false> > >, Eigen::TriangularView, -1, -1, false>, -1, -1, false>, 5>, 0>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose, -1, -1, false>, -1, 1, true>, -1, 1, false> > >, Eigen::TriangularView, -1, -1, false>, -1, -1, false>, 5>, 0> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose, -1, -1, false>, -1, 1, true>, -1, 1, false> > >, Eigen::TriangularView, -1, -1, false>, -1, -1, false>, 5>, 0> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose, -1, -1, false>, -1, 1, true>, -1, 1, false> > >, Eigen::TriangularView, -1, -1, false>, -1, -1, false>, 5>, 0, 7>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose, -1, -1, false>, -1, 1, true>, -1, 1, false> > >, Eigen::TriangularView, -1, -1, false>, -1, -1, false>, 5>, 0, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:92:55: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 92 | if(forward) make_block_householder_triangular_factor(T, vectors, hCoeffs); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 1, -1, true>, 1, -1, false> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 1, -1, true>, 1, -1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 1, -1, true>, 1, -1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 1, -1, true>, 1, -1, false>, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 1, -1, true>, 1, -1, false> >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:73:50: required from ‘void Eigen::internal::make_block_householder_triangular_factor(TriangularFactorType&, const VectorsType&, const CoeffsType&) [with TriangularFactorType = Eigen::Matrix; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 73 | triFactor.row(i).tail(nbVecs-j-1) += z * triFactor.row(j).tail(nbVecs-j-1); | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:92:55: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 92 | if(forward) make_block_householder_triangular_factor(T, vectors, hCoeffs); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 1, -1, false>, 1, -1, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, 1, -1, false>, 1, -1, false> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:564:45: required from ‘struct Eigen::internal::unary_evaluator, const Eigen::Block, 1, -1, false>, 1, -1, false> >, Eigen::internal::IndexBased, double>’ 564 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator, const Eigen::Block, 1, -1, false>, 1, -1, false> > >’ 90 | struct evaluator : public unary_evaluator | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:357:7: required from ‘class Eigen::internal::redux_evaluator, const Eigen::Block, 1, -1, false>, 1, -1, false> > >’ 357 | class redux_evaluator : public internal::evaluator<_XprType> | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:414:17: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseUnaryOp, const Eigen::Block, 1, -1, false>, 1, -1, false> >; typename Eigen::internal::traits::Scalar = double]’ 414 | ThisEvaluator thisEval(derived()); | ^~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseUnaryOp, const Eigen::Block, 1, -1, false>, 1, -1, false> >; typename Eigen::internal::traits::Scalar = double]’ 463 | return derived().redux(Eigen::internal::scalar_sum_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:221:28: required from ‘static typename Eigen::NumTraits::Scalar>::Real Eigen::internal::lpNorm_selector::run(const Eigen::MatrixBase&) [with Derived = Eigen::Block, 1, -1, false>, 1, -1, false>; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]’ 221 | return m.cwiseAbs().sum(); | ~~~~~~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:269:52: required from ‘typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::lpNorm() const [with int p = 1; Derived = Eigen::Block, 1, -1, false>, 1, -1, false>; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]’ 269 | return internal::lpNorm_selector::run(*this); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:514:125: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 514 | abs_col_sum = m_matrix.col(col).tail(size - col).template lpNorm<1>() + m_matrix.row(col).head(col).template lpNorm<1>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:39:52: required from here 39 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 0>, -1, 1, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, 0>, -1, 1, false> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:564:45: required from ‘struct Eigen::internal::unary_evaluator, const Eigen::Block, 0>, -1, 1, false> >, Eigen::internal::IndexBased, double>’ 564 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator, const Eigen::Block, 0>, -1, 1, false> > >’ 90 | struct evaluator : public unary_evaluator | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Visitor.h:79:51: required from ‘class Eigen::internal::visitor_evaluator, const Eigen::Block, 0>, -1, 1, false> > >’ 79 | CoeffReadCost = internal::evaluator::CoeffReadCost | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Visitor.h:123:17: required from ‘void Eigen::DenseBase::visit(Visitor&) const [with Visitor = Eigen::internal::max_coeff_visitor, const Eigen::Block, 0>, -1, 1, false> >, 0>; Derived = Eigen::CwiseUnaryOp, const Eigen::Block, 0>, -1, 1, false> >]’ 123 | ThisEvaluator thisEval(derived()); | ^~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Visitor.h:374:14: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::maxCoeff(IndexType*) const [with int NaNPropagation = 0; IndexType = long int; Derived = Eigen::CwiseUnaryOp, const Eigen::Block, 0>, -1, 1, false> >; typename Eigen::internal::traits::Scalar = double]’ 374 | this->visit(maxVisitor); | ~~~~~~~~~~~^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:501:37: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::maxCoeff(IndexType*) const [with IndexType = long int; Derived = Eigen::CwiseUnaryOp, const Eigen::Block, 0>, -1, 1, false> >; typename Eigen::internal::traits::Scalar = double]’ 501 | return maxCoeff(index); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:325:54: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 325 | mat.diagonal().tail(size-k).cwiseAbs().maxCoeff(&index_of_biggest_in_corner); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 526 | m_info = internal::ldlt_inplace::unblocked(m_matrix, m_transpositions, m_temporary, m_sign) ? Success : NumericalIssue; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:39:52: required from here 39 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, -1, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:372:102: required from ‘struct Eigen::internal::plain_object_eval, -1, -1, false>, Eigen::Dense>’ 372 | typedef typename plain_matrix_type_dense::XprKind, evaluator::Flags>::type type; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:369:45: required from ‘struct Eigen::internal::generic_product_impl, -1, -1, false>, Eigen::Block, -1, 1, false>, Eigen::DenseShape, Eigen::DenseShape, 7>’ 369 | typedef typename nested_eval::type LhsNested; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:178:42: required from ‘static void Eigen::internal::Assignment, Eigen::internal::sub_assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::sub_assign_op&) [with DstXprType = Eigen::Block, -1, 1, false>; Lhs = Eigen::Block, -1, -1, false>; Rhs = Eigen::Block, -1, 1, false>; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>]’ 178 | generic_product_impl::subTo(dst, src.lhs(), src.rhs()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; Func = sub_assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/NoAlias.h:59:31: required from ‘ExpressionType& Eigen::NoAlias::operator-=(const StorageBase&) [with OtherDerived = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; ExpressionType = Eigen::Block, -1, 1, false>; StorageBase = Eigen::MatrixBase]’ 59 | call_assignment_no_alias(m_expression, other.derived(), internal::sub_assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:361:25: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 361 | A21.noalias() -= A20 * temp.head(k); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 526 | m_info = internal::ldlt_inplace::unblocked(m_matrix, m_transpositions, m_temporary, m_sign) ? Success : NumericalIssue; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:39:52: required from here 39 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Block, -1, 1, true> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Block, -1, 1, true> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Block, -1, 1, true> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl, const Eigen::Block, -1, 1, true>, Eigen::Dense>’ 94 | class CwiseUnaryOpImpl | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true> >’ 55 | class CwiseUnaryOp : public CwiseUnaryOpImpl::StorageKind>, internal::no_assignment_operator | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:98:40: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/QR/ColPivHouseholderQR.h:507:52: required from ‘void Eigen::ColPivHouseholderQR::computeInPlace() [with _MatrixType = Eigen::Matrix]’ 507 | m_colNormsDirect.coeffRef(k) = m_qr.col(k).norm(); | ~~~~~~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/QR/ColPivHouseholderQR.h:477:3: required from ‘Eigen::ColPivHouseholderQR<_MatrixType>& Eigen::ColPivHouseholderQR::compute(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix]’ 477 | computeInPlace(); | ^~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:229:19: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 229 | m_qr.compute(m_adjoint); | ~~~~~~~~~~~~^~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, false>, -1, 1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, false>, -1, 1, false>, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, true>, -1, 1, false>, -1, 1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, 1, true>, -1, 1, false>, -1, 1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, 1, true>, -1, 1, false>, -1, 1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, -1, 1, true>, -1, 1, false>, -1, 1, false, true>’ 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/QR/ColPivHouseholderQR.h:540:52: required from ‘void Eigen::ColPivHouseholderQR::computeInPlace() [with _MatrixType = Eigen::Matrix]’ 540 | m_qr.col(k).tail(rows-k).makeHouseholderInPlace(m_hCoeffs.coeffRef(k), beta); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/QR/ColPivHouseholderQR.h:477:3: required from ‘Eigen::ColPivHouseholderQR<_MatrixType>& Eigen::ColPivHouseholderQR::compute(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix]’ 477 | computeInPlace(); | ^~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:229:19: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 229 | m_qr.compute(m_adjoint); | ~~~~~~~~~~~~^~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false>, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/Householder.h:93:22: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/QR/ColPivHouseholderQR.h:540:52: required from ‘void Eigen::ColPivHouseholderQR::computeInPlace() [with _MatrixType = Eigen::Matrix]’ 540 | m_qr.col(k).tail(rows-k).makeHouseholderInPlace(m_hCoeffs.coeffRef(k), beta); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/QR/ColPivHouseholderQR.h:477:3: required from ‘Eigen::ColPivHouseholderQR<_MatrixType>& Eigen::ColPivHouseholderQR::compute(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix]’ 477 | computeInPlace(); | ^~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:229:19: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 229 | m_qr.compute(m_adjoint); | ~~~~~~~~~~~~^~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Block, -1, 1, true>, -1, 1, false> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Block, -1, 1, true>, -1, 1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Block, -1, 1, true>, -1, 1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl, const Eigen::Block, -1, 1, true>, -1, 1, false>, Eigen::Dense>’ 94 | class CwiseUnaryOpImpl | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true>, -1, 1, false> >’ 55 | class CwiseUnaryOp : public CwiseUnaryOpImpl::StorageKind>, internal::no_assignment_operator | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:98:40: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/QR/ColPivHouseholderQR.h:567:77: required from ‘void Eigen::ColPivHouseholderQR::computeInPlace() [with _MatrixType = Eigen::Matrix]’ 567 | m_colNormsDirect.coeffRef(j) = m_qr.col(j).tail(rows - k - 1).norm(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/QR/ColPivHouseholderQR.h:477:3: required from ‘Eigen::ColPivHouseholderQR<_MatrixType>& Eigen::ColPivHouseholderQR::compute(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix]’ 477 | computeInPlace(); | ^~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:229:19: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 229 | m_qr.compute(m_adjoint); | ~~~~~~~~~~~~^~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::DiagonalWrapper >, 1>, const Eigen::Block >, -1, 1, false>, 0>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::DiagonalWrapper >, 1>, const Eigen::Block >, -1, 1, false>, 0> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, Eigen::DiagonalWrapper >, 1>, const Eigen::Block >, -1, 1, false>, 0> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base, Eigen::DiagonalWrapper >, 1>, const Eigen::Block >, -1, 1, false>, 0, 7>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl, Eigen::DiagonalWrapper >, 1>, const Eigen::Block >, -1, 1, false>, 0, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, Eigen::DiagonalWrapper >, 1>, const Eigen::Block >, -1, 1, false>, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:345:45: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Product, Eigen::DiagonalWrapper >, 1>; Rhs = Eigen::Transpose >; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>]’ 148 | generic_product_impl::evalTo(dst, src.lhs(), src.rhs()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 797 | internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 594 | _set_noalias(other); | ~~~~~~~~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 423 | : Base(other.derived()) | ^ GetIndCEScoresCPPnewInd.cpp:23:44: required from here 23 | return(svdMat.matrixV()*Sinv.asDiagonal()*svdMat.matrixU().transpose()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase >, -1, 1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase >, -1, 1, false>, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >, -1, 1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >, -1, 1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase >, -1, 1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense >, -1, 1, false, true>’ 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Product, Eigen::DiagonalWrapper >, 1>; Rhs = Eigen::Transpose >; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>]’ 148 | generic_product_impl::evalTo(dst, src.lhs(), src.rhs()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 797 | internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 594 | _set_noalias(other); | ~~~~~~~~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 423 | : Base(other.derived()) | ^ GetIndCEScoresCPPnewInd.cpp:23:44: required from here 23 | return(svdMat.matrixV()*Sinv.asDiagonal()*svdMat.matrixU().transpose()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator >, -1, 1, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator >, -1, 1, false> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:372:102: required from ‘struct Eigen::internal::plain_object_eval >, -1, 1, false>, Eigen::Dense>’ 372 | typedef typename plain_matrix_type_dense::XprKind, evaluator::Flags>::type type; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:370:45: required from ‘struct Eigen::internal::generic_product_impl, Eigen::DiagonalWrapper >, 1>, const Eigen::Block >, -1, 1, false>, Eigen::DenseShape, Eigen::DenseShape, 7>’ 370 | typedef typename nested_eval::type RhsNested; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:479:24: required from ‘static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix; Lhs = Eigen::Product, Eigen::DiagonalWrapper >, 1>; Rhs = Eigen::Transpose >; Scalar = double]’ 478 | return internal::generic_product_impl | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 | ::scaleAndAddTo(dst_vec, a_lhs, a_rhs.col(0), alpha); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:445:20: required from ‘static void Eigen::internal::generic_product_impl::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix; Lhs = Eigen::Product, Eigen::DiagonalWrapper >, 1>; Rhs = Eigen::Transpose >]’ 445 | scaleAndAddTo(dst, lhs, rhs, Scalar(1)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Product, Eigen::DiagonalWrapper >, 1>; Rhs = Eigen::Transpose >; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>]’ 148 | generic_product_impl::evalTo(dst, src.lhs(), src.rhs()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 797 | internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 594 | _set_noalias(other); | ~~~~~~~~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 423 | : Base(other.derived()) | ^ GetIndCEScoresCPPnewInd.cpp:23:44: required from here 23 | return(svdMat.matrixV()*Sinv.asDiagonal()*svdMat.matrixU().transpose()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::DiagonalWrapper >, 1>, 1, -1, false>, Eigen::Transpose >, 0>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::DiagonalWrapper >, 1>, 1, -1, false>, Eigen::Transpose >, 0> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, Eigen::DiagonalWrapper >, 1>, 1, -1, false>, Eigen::Transpose >, 0> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base, Eigen::DiagonalWrapper >, 1>, 1, -1, false>, Eigen::Transpose >, 0, 7>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl, Eigen::DiagonalWrapper >, 1>, 1, -1, false>, Eigen::Transpose >, 0, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, Eigen::DiagonalWrapper >, 1>, 1, -1, false>, Eigen::Transpose >, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:345:45: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Product, Eigen::DiagonalWrapper >, 1>; Rhs = Eigen::Transpose >; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>]’ 148 | generic_product_impl::evalTo(dst, src.lhs(), src.rhs()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 797 | internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 594 | _set_noalias(other); | ~~~~~~~~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 423 | : Base(other.derived()) | ^ GetIndCEScoresCPPnewInd.cpp:23:44: required from here 23 | return(svdMat.matrixV()*Sinv.asDiagonal()*svdMat.matrixU().transpose()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::DiagonalWrapper >, 1>, 1, -1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::DiagonalWrapper >, 1>, 1, -1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, Eigen::DiagonalWrapper >, 1>, 1, -1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:172:103: required from ‘class Eigen::internal::BlockImpl_dense, Eigen::DiagonalWrapper >, 1>, 1, -1, false, false>’ 172 | template class BlockImpl_dense | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from ‘class Eigen::BlockImpl, Eigen::DiagonalWrapper >, 1>, 1, -1, false, Eigen::Dense>’ 154 | class BlockImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block, Eigen::DiagonalWrapper >, 1>, 1, -1, false>’ 103 | template class Block | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:113:15: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Product, Eigen::DiagonalWrapper >, 1>; Rhs = Eigen::Transpose >; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>]’ 148 | generic_product_impl::evalTo(dst, src.lhs(), src.rhs()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 797 | internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 594 | _set_noalias(other); | ~~~~~~~~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 423 | : Base(other.derived()) | ^ GetIndCEScoresCPPnewInd.cpp:23:44: required from here 23 | return(svdMat.matrixV()*Sinv.asDiagonal()*svdMat.matrixU().transpose()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, Eigen::DiagonalWrapper >, 1>, 1, -1, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, Eigen::DiagonalWrapper >, 1>, 1, -1, false> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:372:102: required from ‘struct Eigen::internal::plain_object_eval, Eigen::DiagonalWrapper >, 1>, 1, -1, false>, Eigen::Dense>’ 372 | typedef typename plain_matrix_type_dense::XprKind, evaluator::Flags>::type type; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:369:45: required from ‘struct Eigen::internal::generic_product_impl, Eigen::DiagonalWrapper >, 1>, 1, -1, false>, Eigen::Transpose >, Eigen::DenseShape, Eigen::DenseShape, 7>’ 369 | typedef typename nested_eval::type LhsNested; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:486:24: required from ‘static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix; Lhs = Eigen::Product, Eigen::DiagonalWrapper >, 1>; Rhs = Eigen::Transpose >; Scalar = double]’ 485 | return internal::generic_product_impl | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 486 | ::scaleAndAddTo(dst_vec, a_lhs.row(0), a_rhs, alpha); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:445:20: required from ‘static void Eigen::internal::generic_product_impl::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix; Lhs = Eigen::Product, Eigen::DiagonalWrapper >, 1>; Rhs = Eigen::Transpose >]’ 445 | scaleAndAddTo(dst, lhs, rhs, Scalar(1)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Product, Eigen::DiagonalWrapper >, 1>; Rhs = Eigen::Transpose >; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>]’ 148 | generic_product_impl::evalTo(dst, src.lhs(), src.rhs()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 797 | internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 594 | _set_noalias(other); | ~~~~~~~~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 423 | : Base(other.derived()) | ^ GetIndCEScoresCPPnewInd.cpp:23:44: required from here 23 | return(svdMat.matrixV()*Sinv.asDiagonal()*svdMat.matrixU().transpose()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 1, -1, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Visitor.h:79:51: required from ‘class Eigen::internal::visitor_evaluator, 1, -1, false> >’ 79 | CoeffReadCost = internal::evaluator::CoeffReadCost | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Visitor.h:123:17: required from ‘void Eigen::DenseBase::visit(Visitor&) const [with Visitor = Eigen::internal::max_coeff_visitor, 1, -1, false>, 0>; Derived = Eigen::Block, 1, -1, false>]’ 123 | ThisEvaluator thisEval(derived()); | ^~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Visitor.h:374:14: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::maxCoeff(IndexType*) const [with int NaNPropagation = 0; IndexType = long int; Derived = Eigen::Block, 1, -1, false>; typename Eigen::internal::traits::Scalar = double]’ 374 | this->visit(maxVisitor); | ~~~~~~~~~~~^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:501:37: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::maxCoeff(IndexType*) const [with IndexType = long int; Derived = Eigen::Block, 1, -1, false>; typename Eigen::internal::traits::Scalar = double]’ 501 | return maxCoeff(index); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/QR/ColPivHouseholderQR.h:521:90: required from ‘void Eigen::ColPivHouseholderQR::computeInPlace() [with _MatrixType = Eigen::Matrix]’ 521 | RealScalar biggest_col_sq_norm = numext::abs2(m_colNormsUpdated.tail(cols-k).maxCoeff(&biggest_col_index)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/QR/ColPivHouseholderQR.h:477:3: required from ‘Eigen::ColPivHouseholderQR<_MatrixType>& Eigen::ColPivHouseholderQR::compute(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix]’ 477 | computeInPlace(); | ^~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:229:19: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 229 | m_qr.compute(m_adjoint); | ~~~~~~~~~~~~^~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl, const Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false>, Eigen::Dense>’ 94 | class CwiseUnaryOpImpl | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false> >’ 55 | class CwiseUnaryOp : public CwiseUnaryOpImpl::StorageKind>, internal::no_assignment_operator | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:98:40: required from ‘typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::squaredNorm() const [with Derived = Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false>; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]’ 98 | return numext::real((*this).cwiseAbs2().sum()); | ~~~~~~~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/Householder.h:78:71: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/QR/ColPivHouseholderQR.h:540:52: required from ‘void Eigen::ColPivHouseholderQR::computeInPlace() [with _MatrixType = Eigen::Matrix]’ 540 | m_qr.col(k).tail(rows-k).makeHouseholderInPlace(m_hCoeffs.coeffRef(k), beta); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/QR/ColPivHouseholderQR.h:477:3: required from ‘Eigen::ColPivHouseholderQR<_MatrixType>& Eigen::ColPivHouseholderQR::compute(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix]’ 477 | computeInPlace(); | ^~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:229:19: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 229 | m_qr.compute(m_adjoint); | ~~~~~~~~~~~~^~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, -1, false>, -1, -1, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:372:102: required from ‘struct Eigen::internal::plain_object_eval, -1, -1, false>, -1, -1, false>, Eigen::Dense>’ 372 | typedef typename plain_matrix_type_dense::XprKind, evaluator::Flags>::type type; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:369:45: required from ‘struct Eigen::internal::generic_product_impl, -1, -1, false>, -1, -1, false>, Eigen::Block, -1, 1, false>, Eigen::DenseShape, Eigen::DenseShape, 7>’ 369 | typedef typename nested_eval::type LhsNested; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Map, 0, Eigen::Stride<0, 0> >; Lhs = Eigen::Block, -1, -1, false>, -1, -1, false>; Rhs = Eigen::Block, -1, 1, false>; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, -1, -1, false>, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>]’ 148 | generic_product_impl::evalTo(dst, src.lhs(), src.rhs()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Map, 0, Eigen::Stride<0, 0> >; Src = Eigen::Product, -1, -1, false>, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/NoAlias.h:43:31: required from ‘ExpressionType& Eigen::NoAlias::operator=(const StorageBase&) [with OtherDerived = Eigen::Product, -1, -1, false>, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; ExpressionType = Eigen::Map, 0, Eigen::Stride<0, 0> >; StorageBase = Eigen::MatrixBase]’ 43 | call_assignment_no_alias(m_expression, other.derived(), internal::assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/Householder.h:167:19: required from ‘void Eigen::MatrixBase::applyHouseholderOnTheRight(const EssentialPart&, const Scalar&, Scalar*) [with EssentialPart = Eigen::Block, -1, 1, false>; Derived = Eigen::Block, -1, -1, false>; Scalar = double]’ 167 | tmp.noalias() = right * essential; | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:304:43: required from ‘void Eigen::HouseholderSequence::evalTo(Dest&, Workspace&) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 303 | dst.bottomRightCorner(cornerSize, cornerSize) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 | .applyHouseholderOnTheRight(essentialVector(k), m_coeffs.coeff(k), workspace.data()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:232:56: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 232 | if(svd.m_computeFullV) m_qr.householderQ().evalTo(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, 1, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:372:102: required from ‘struct Eigen::internal::plain_object_eval, -1, 1, false>, Eigen::Dense>’ 372 | typedef typename plain_matrix_type_dense::XprKind, evaluator::Flags>::type type; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:370:45: required from ‘struct Eigen::internal::generic_product_impl, -1, -1, false>, -1, -1, false>, Eigen::Block, -1, 1, false>, Eigen::DenseShape, Eigen::DenseShape, 7>’ 370 | typedef typename nested_eval::type RhsNested; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Map, 0, Eigen::Stride<0, 0> >; Lhs = Eigen::Block, -1, -1, false>, -1, -1, false>; Rhs = Eigen::Block, -1, 1, false>; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, -1, -1, false>, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>]’ 148 | generic_product_impl::evalTo(dst, src.lhs(), src.rhs()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Map, 0, Eigen::Stride<0, 0> >; Src = Eigen::Product, -1, -1, false>, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/NoAlias.h:43:31: required from ‘ExpressionType& Eigen::NoAlias::operator=(const StorageBase&) [with OtherDerived = Eigen::Product, -1, -1, false>, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; ExpressionType = Eigen::Map, 0, Eigen::Stride<0, 0> >; StorageBase = Eigen::MatrixBase]’ 43 | call_assignment_no_alias(m_expression, other.derived(), internal::assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/Householder.h:167:19: required from ‘void Eigen::MatrixBase::applyHouseholderOnTheRight(const EssentialPart&, const Scalar&, Scalar*) [with EssentialPart = Eigen::Block, -1, 1, false>; Derived = Eigen::Block, -1, -1, false>; Scalar = double]’ 167 | tmp.noalias() = right * essential; | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:304:43: required from ‘void Eigen::HouseholderSequence::evalTo(Dest&, Workspace&) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 303 | dst.bottomRightCorner(cornerSize, cornerSize) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 | .applyHouseholderOnTheRight(essentialVector(k), m_coeffs.coeff(k), workspace.data()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:232:56: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 232 | if(svd.m_computeFullV) m_qr.householderQ().evalTo(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, 1, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:142:7: required from ‘Eigen::DenseCoeffsBase::CoeffReturnType Eigen::DenseCoeffsBase::coeff(Eigen::Index) const [with Derived = Eigen::Block, -1, 1, false>; CoeffReturnType = double; Eigen::Index = long int]’ 142 | EIGEN_STATIC_ASSERT(internal::evaluator::Flags & LinearAccessBit, | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:182:19: required from ‘Eigen::DenseCoeffsBase::CoeffReturnType Eigen::DenseCoeffsBase::operator()(Eigen::Index) const [with Derived = Eigen::Block, -1, 1, false>; CoeffReturnType = double; Eigen::Index = long int]’ 182 | return coeff(index); | ~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:63:53: required from ‘void Eigen::internal::make_block_householder_triangular_factor(TriangularFactorType&, const VectorsType&, const CoeffsType&) [with TriangularFactorType = Eigen::Matrix; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 63 | triFactor.row(i).tail(rt).noalias() = -hCoeffs(i) * vectors.col(i).tail(rs).adjoint() | ~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:92:55: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 92 | if(forward) make_block_householder_triangular_factor(T, vectors, hCoeffs); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 1>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 1> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 1> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 1, 8>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 1, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 1>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:462:68: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Product, Eigen::DiagonalWrapper >, 1>; Rhs = Eigen::Transpose >; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>]’ 148 | generic_product_impl::evalTo(dst, src.lhs(), src.rhs()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 797 | internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 594 | _set_noalias(other); | ~~~~~~~~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 423 | : Base(other.derived()) | ^ GetIndCEScoresCPPnewInd.cpp:23:44: required from here 23 | return(svdMat.matrixV()*Sinv.asDiagonal()*svdMat.matrixU().transpose()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase >, -1, 1, false>, -1, 1, true>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase >, -1, 1, false>, -1, 1, true>, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >, -1, 1, false>, -1, 1, true> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >, -1, 1, false>, -1, 1, true> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase >, -1, 1, false>, -1, 1, true>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense >, -1, 1, false>, -1, 1, true, true>’ 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Product, Eigen::DiagonalWrapper >, 1>; Rhs = Eigen::Transpose >; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>]’ 148 | generic_product_impl::evalTo(dst, src.lhs(), src.rhs()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 797 | internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 594 | _set_noalias(other); | ~~~~~~~~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 423 | : Base(other.derived()) | ^ GetIndCEScoresCPPnewInd.cpp:23:44: required from here 23 | return(svdMat.matrixV()*Sinv.asDiagonal()*svdMat.matrixU().transpose()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::DiagonalWrapper >, 1>, 1, -1, false>, 1, -1, true>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::DiagonalWrapper >, 1>, 1, -1, false>, 1, -1, true> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, Eigen::DiagonalWrapper >, 1>, 1, -1, false>, 1, -1, true> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:172:103: required from ‘class Eigen::internal::BlockImpl_dense, Eigen::DiagonalWrapper >, 1>, 1, -1, false>, 1, -1, true, false>’ 172 | template class BlockImpl_dense | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from ‘class Eigen::BlockImpl, Eigen::DiagonalWrapper >, 1>, 1, -1, false>, 1, -1, true, Eigen::Dense>’ 154 | class BlockImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block, Eigen::DiagonalWrapper >, 1>, 1, -1, false>, 1, -1, true>’ 103 | template class Block | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:380:43: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Product, Eigen::DiagonalWrapper >, 1>; Rhs = Eigen::Transpose >; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>]’ 148 | generic_product_impl::evalTo(dst, src.lhs(), src.rhs()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 797 | internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 594 | _set_noalias(other); | ~~~~~~~~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 423 | : Base(other.derived()) | ^ GetIndCEScoresCPPnewInd.cpp:23:44: required from here 23 | return(svdMat.matrixV()*Sinv.asDiagonal()*svdMat.matrixU().transpose()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true>, -1, 1, false> >; Eigen::Index = long int]’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:243:63: required from ‘static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Evaluator&, const Func&, const XprType&) [with XprType = Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true>, -1, 1, false> >; Func = Eigen::internal::scalar_sum_op; Evaluator = Eigen::internal::redux_evaluator, const Eigen::Block, -1, 1, true>, -1, 1, false> > >; Scalar = double]’ 243 | const Index alignedStart = internal::first_default_aligned(xpr); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true>, -1, 1, false> >; typename Eigen::internal::traits::Scalar = double]’ 418 | return internal::redux_impl::run(thisEval, func, derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true>, -1, 1, false> >; typename Eigen::internal::traits::Scalar = double]’ 463 | return derived().redux(Eigen::internal::scalar_sum_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:221:28: required from ‘static typename Eigen::NumTraits::Scalar>::Real Eigen::internal::lpNorm_selector::run(const Eigen::MatrixBase&) [with Derived = Eigen::Block, -1, 1, true>, -1, 1, false>; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]’ 221 | return m.cwiseAbs().sum(); | ~~~~~~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:269:52: required from ‘typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::lpNorm() const [with int p = 1; Derived = Eigen::Block, -1, 1, true>, -1, 1, false>; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]’ 269 | return internal::lpNorm_selector::run(*this); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:514:74: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 514 | abs_col_sum = m_matrix.col(col).tail(size - col).template lpNorm<1>() + m_matrix.row(col).head(col).template lpNorm<1>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:39:52: required from here 39 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 654 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, false> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, false>, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, false> >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:251:54: required from ‘static void Eigen::internal::generic_product_impl::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix; Lhs = Eigen::Block, 1, -1, false>; Rhs = Eigen::Block, -1, 1, false>]’ 251 | dst.coeffRef(0,0) = (lhs.transpose().cwiseProduct(rhs)).sum(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:124:75: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:175:24: required from ‘Eigen::ProductImpl::Scalar Eigen::ProductImpl::coeff(Eigen::Index, Eigen::Index) const [with Lhs = Eigen::Block, 1, -1, false>; Rhs = Eigen::Block, -1, 1, false>; int Option = 0; Scalar = double; Eigen::Index = long int]’ 175 | return internal::evaluator(derived()).coeff(row,col); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:530:29: required from ‘Eigen::DenseBase::CoeffReturnType Eigen::DenseBase::value() const [with Derived = Eigen::Product, 1, -1, false>, Eigen::Block, -1, 1, false>, 0>; CoeffReturnType = double]’ 530 | return derived().coeff(0,0); | ~~~~~~~~~~~~~~~^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:359:56: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 359 | mat.coeffRef(k,k) -= (A10 * temp.head(k)).value(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 526 | m_info = internal::ldlt_inplace::unblocked(m_matrix, m_transpositions, m_temporary, m_sign) ? Success : NumericalIssue; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:39:52: required from here 39 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, -1, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, -1, -1, false> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:41: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::Block, -1, -1, false>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ 739 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8: required from ‘struct Eigen::internal::evaluator, const Eigen::Block, -1, -1, false>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > > >’ 722 | struct evaluator > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:774:20: required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::Block, -1, -1, false>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Functor = assign_op]’ 774 | SrcEvaluatorType srcEvaluator(src); | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31: required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::Block, -1, -1, false>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Functor = Eigen::internal::assign_op; Weak = void]’ 954 | call_dense_assignment_loop(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Block, -1, -1, false>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Block, -1, -1, false>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Block, -1, -1, false>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:697:18: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 697 | m_workMatrix = matrix.block(0,0,m_diagSize,m_diagSize) / scale; | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::DiagonalWrapper >, 1>, -1, 1, true>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::DiagonalWrapper >, 1>, -1, 1, true> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, Eigen::DiagonalWrapper >, 1>, -1, 1, true> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:172:103: required from ‘class Eigen::internal::BlockImpl_dense, Eigen::DiagonalWrapper >, 1>, -1, 1, true, false>’ 172 | template class BlockImpl_dense | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from ‘class Eigen::BlockImpl, Eigen::DiagonalWrapper >, 1>, -1, 1, true, Eigen::Dense>’ 154 | class BlockImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block, Eigen::DiagonalWrapper >, 1>, -1, 1, true>’ 103 | template class Block | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:366:52: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Product, Eigen::DiagonalWrapper >, 1>; Rhs = Eigen::Transpose >; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>]’ 148 | generic_product_impl::evalTo(dst, src.lhs(), src.rhs()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 797 | internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 594 | _set_noalias(other); | ~~~~~~~~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 423 | : Base(other.derived()) | ^ GetIndCEScoresCPPnewInd.cpp:23:44: required from here 23 | return(svdMat.matrixV()*Sinv.asDiagonal()*svdMat.matrixU().transpose()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, Eigen::DiagonalWrapper >, 1>, -1, 1, true> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, Eigen::DiagonalWrapper >, 1>, -1, 1, true> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, Eigen::DiagonalWrapper >, 1>, -1, 1, true> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, Eigen::DiagonalWrapper >, 1>, -1, 1, true>, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, Eigen::DiagonalWrapper >, 1>, -1, 1, true> >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:366:43: required from ‘static void Eigen::internal::gemv_dense_selector<2, 0, false>::run(const Lhs&, const Rhs&, Dest&, const typename Dest::Scalar&) [with Lhs = Eigen::Product, Eigen::DiagonalWrapper >, 1>; Rhs = Eigen::Block >, -1, 1, false>; Dest = Eigen::Block, -1, 1, true>; typename Dest::Scalar = double]’ 366 | dest += (alpha*actual_rhs.coeff(k)) * lhs.col(k); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:388:34: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Product, Eigen::DiagonalWrapper >, 1>; Rhs = Eigen::Transpose >; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>]’ 148 | generic_product_impl::evalTo(dst, src.lhs(), src.rhs()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 797 | internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 594 | _set_noalias(other); | ~~~~~~~~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 423 | : Base(other.derived()) | ^ GetIndCEScoresCPPnewInd.cpp:23:44: required from here 23 | return(svdMat.matrixV()*Sinv.asDiagonal()*svdMat.matrixU().transpose()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 1, -1, false> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1, -1, false> >, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 1, -1, false> >, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 1, -1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1, -1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl, 1, -1, false>, Eigen::Dense>’ 118 | template class TransposeImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Product, Eigen::DiagonalWrapper >, 1>; Rhs = Eigen::Transpose >; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>]’ 148 | generic_product_impl::evalTo(dst, src.lhs(), src.rhs()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 797 | internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 594 | _set_noalias(other); | ~~~~~~~~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 423 | : Base(other.derived()) | ^ GetIndCEScoresCPPnewInd.cpp:23:44: required from here 23 | return(svdMat.matrixV()*Sinv.asDiagonal()*svdMat.matrixU().transpose()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase > >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase > >, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase > > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase > > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl >, Eigen::Dense>’ 118 | template class TransposeImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose > >’ 52 | template class Transpose | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:207:26: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Product, Eigen::DiagonalWrapper >, 1>; Rhs = Eigen::Transpose >; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>]’ 148 | generic_product_impl::evalTo(dst, src.lhs(), src.rhs()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 797 | internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 594 | _set_noalias(other); | ~~~~~~~~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 423 | : Base(other.derived()) | ^ GetIndCEScoresCPPnewInd.cpp:23:44: required from here 23 | return(svdMat.matrixV()*Sinv.asDiagonal()*svdMat.matrixU().transpose()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::DiagonalWrapper >, 1>, 1, -1, false> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::DiagonalWrapper >, 1>, 1, -1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, Eigen::DiagonalWrapper >, 1>, 1, -1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl, Eigen::DiagonalWrapper >, 1>, 1, -1, false>, Eigen::Dense>’ 118 | template class TransposeImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose, Eigen::DiagonalWrapper >, 1>, 1, -1, false> >’ 52 | template class Transpose | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:207:43: required from ‘static void Eigen::internal::gemv_dense_selector<1, StorageOrder, BlasCompatible>::run(const Lhs&, const Rhs&, Dest&, const typename Dest::Scalar&) [with Lhs = Eigen::Block, Eigen::DiagonalWrapper >, 1>, 1, -1, false>; Rhs = Eigen::Transpose >; Dest = Eigen::Block, 1, -1, false>; int StorageOrder = 1; bool BlasCompatible = true; typename Dest::Scalar = double]’ 207 | ::run(rhs.transpose(), lhs.transpose(), destT, alpha); | ~~~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:388:34: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Product, Eigen::DiagonalWrapper >, 1>; Rhs = Eigen::Transpose >; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>]’ 148 | generic_product_impl::evalTo(dst, src.lhs(), src.rhs()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 797 | internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 594 | _set_noalias(other); | ~~~~~~~~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 423 | : Base(other.derived()) | ^ GetIndCEScoresCPPnewInd.cpp:23:44: required from here 23 | return(svdMat.matrixV()*Sinv.asDiagonal()*svdMat.matrixU().transpose()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, -1, false>, 1, -1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, -1, -1, false>, 1, -1, false>, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, -1, false>, 1, -1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, -1, false>, 1, -1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, -1, false>, 1, -1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, -1, -1, false>, 1, -1, false, true>’ 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; Func = sub_assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/NoAlias.h:59:31: required from ‘ExpressionType& Eigen::NoAlias::operator-=(const StorageBase&) [with OtherDerived = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; ExpressionType = Eigen::Block, -1, 1, false>; StorageBase = Eigen::MatrixBase]’ 59 | call_assignment_no_alias(m_expression, other.derived(), internal::sub_assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:361:25: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 361 | A21.noalias() -= A20 * temp.head(k); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 526 | m_info = internal::ldlt_inplace::unblocked(m_matrix, m_transpositions, m_temporary, m_sign) ? Success : NumericalIssue; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:39:52: required from here 39 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, false>, -1, 1, true>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, false>, -1, 1, true>, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, false>, -1, 1, true> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, 1, false>, -1, 1, true> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, 1, false>, -1, 1, true>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, -1, 1, false>, -1, 1, true, true>’ 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; Func = sub_assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/NoAlias.h:59:31: required from ‘ExpressionType& Eigen::NoAlias::operator-=(const StorageBase&) [with OtherDerived = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; ExpressionType = Eigen::Block, -1, 1, false>; StorageBase = Eigen::MatrixBase]’ 59 | call_assignment_no_alias(m_expression, other.derived(), internal::sub_assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:361:25: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 361 | A21.noalias() -= A20 * temp.head(k); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 526 | m_info = internal::ldlt_inplace::unblocked(m_matrix, m_transpositions, m_temporary, m_sign) ? Success : NumericalIssue; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:39:52: required from here 39 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::Matrix; Eigen::Index = long int]’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:243:63: required from ‘static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Evaluator&, const Func&, const XprType&) [with XprType = Eigen::Matrix; Func = Eigen::internal::scalar_max_op; Evaluator = Eigen::internal::redux_evaluator >; Scalar = double]’ 243 | const Index alignedStart = internal::first_default_aligned(xpr); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_max_op; Derived = Eigen::Matrix; typename Eigen::internal::traits::Scalar = double]’ 418 | return internal::redux_impl::run(thisEval, func, derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:448:25: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::maxCoeff() const [with int NaNPropagation = 0; Derived = Eigen::Matrix; typename Eigen::internal::traits::Scalar = double]’ 448 | return derived().redux(Eigen::internal::scalar_max_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:466:37: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::maxCoeff() const [with Derived = Eigen::Matrix; typename Eigen::internal::traits::Scalar = double]’ 466 | return maxCoeff(); | ~~~~~~~~~~~~~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/QR/ColPivHouseholderQR.h:511:85: required from ‘void Eigen::ColPivHouseholderQR::computeInPlace() [with _MatrixType = Eigen::Matrix]’ 511 | RealScalar threshold_helper = numext::abs2(m_colNormsUpdated.maxCoeff() * NumTraits::epsilon()) / RealScalar(rows); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/QR/ColPivHouseholderQR.h:477:3: required from ‘Eigen::ColPivHouseholderQR<_MatrixType>& Eigen::ColPivHouseholderQR::compute(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix]’ 477 | computeInPlace(); | ^~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:229:19: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 229 | m_qr.compute(m_adjoint); | ~~~~~~~~~~~~^~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 654 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, 1, true>, -1, 1, false>, -1, 1, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, -1, 1, true>, -1, 1, false>, -1, 1, false> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:564:45: required from ‘struct Eigen::internal::unary_evaluator, const Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false> >, Eigen::internal::IndexBased, double>’ 564 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator, const Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false> > >’ 90 | struct evaluator : public unary_evaluator | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:357:7: required from ‘class Eigen::internal::redux_evaluator, const Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false> > >’ 357 | class redux_evaluator : public internal::evaluator<_XprType> | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:414:17: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false> >; typename Eigen::internal::traits::Scalar = double]’ 414 | ThisEvaluator thisEval(derived()); | ^~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/QR/ColPivHouseholderQR.h:540:52: required from ‘void Eigen::ColPivHouseholderQR::computeInPlace() [with _MatrixType = Eigen::Matrix]’ 540 | m_qr.col(k).tail(rows-k).makeHouseholderInPlace(m_hCoeffs.coeffRef(k), beta); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/QR/ColPivHouseholderQR.h:477:3: required from ‘Eigen::ColPivHouseholderQR<_MatrixType>& Eigen::ColPivHouseholderQR::compute(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix]’ 477 | computeInPlace(); | ^~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:229:19: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 229 | m_qr.compute(m_adjoint); | ~~~~~~~~~~~~^~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, -1, false>, -1, 1, true> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:774:20: required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Map, 0, Eigen::Stride<0, 0> >; SrcXprType = Eigen::Block, -1, -1, false>, -1, 1, true>; Functor = add_assign_op]’ 774 | SrcEvaluatorType srcEvaluator(src); | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31: required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Map, 0, Eigen::Stride<0, 0> >; SrcXprType = Eigen::Block, -1, -1, false>, -1, 1, true>; Functor = Eigen::internal::add_assign_op; Weak = void]’ 954 | call_dense_assignment_loop(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Map, 0, Eigen::Stride<0, 0> >; Src = Eigen::Block, -1, -1, false>, -1, 1, true>; Func = add_assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:858:27: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Map, 0, Eigen::Stride<0, 0> >; Src = Eigen::Block, -1, -1, false>, -1, 1, true>; Func = add_assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 858 | call_assignment_no_alias(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:177:18: required from ‘Derived& Eigen::MatrixBase::operator+=(const Eigen::MatrixBase&) [with OtherDerived = Eigen::Block, -1, -1, false>, -1, 1, true>; Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >]’ 177 | call_assignment(derived(), other.derived(), internal::add_assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/Householder.h:168:9: required from ‘void Eigen::MatrixBase::applyHouseholderOnTheRight(const EssentialPart&, const Scalar&, Scalar*) [with EssentialPart = Eigen::Block, -1, 1, false>; Derived = Eigen::Block, -1, -1, false>; Scalar = double]’ 168 | tmp += this->col(0); | ~~~~^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:304:43: required from ‘void Eigen::HouseholderSequence::evalTo(Dest&, Workspace&) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 303 | dst.bottomRightCorner(cornerSize, cornerSize) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 | .applyHouseholderOnTheRight(essentialVector(k), m_coeffs.coeff(k), workspace.data()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:232:56: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 232 | if(svd.m_computeFullV) m_qr.householderQ().evalTo(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 16, Eigen::Stride<0, 0> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 16, Eigen::Stride<0, 0> >, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 16, Eigen::Stride<0, 0> >, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 16, Eigen::Stride<0, 0> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 16, Eigen::Stride<0, 0> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 16, Eigen::Stride<0, 0> >, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/Householder.h:170:21: required from ‘void Eigen::MatrixBase::applyHouseholderOnTheRight(const EssentialPart&, const Scalar&, Scalar*) [with EssentialPart = Eigen::Block, -1, 1, false>; Derived = Eigen::Block, -1, -1, false>; Scalar = double]’ 170 | right.noalias() -= tau * tmp * essential.adjoint(); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:304:43: required from ‘void Eigen::HouseholderSequence::evalTo(Dest&, Workspace&) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 303 | dst.bottomRightCorner(cornerSize, cornerSize) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 | .applyHouseholderOnTheRight(essentialVector(k), m_coeffs.coeff(k), workspace.data()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:232:56: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 232 | if(svd.m_computeFullV) m_qr.householderQ().evalTo(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, -1, false>, -1, -1, false>, -1, 1, true>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, -1, -1, false>, -1, -1, false>, -1, 1, true>, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, -1, -1, false>, -1, -1, false>, -1, 1, true>, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, -1, false>, -1, -1, false>, -1, 1, true> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, -1, false>, -1, -1, false>, -1, 1, true> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, -1, false>, -1, -1, false>, -1, 1, true>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/Householder.h:170:21: required from ‘void Eigen::MatrixBase::applyHouseholderOnTheRight(const EssentialPart&, const Scalar&, Scalar*) [with EssentialPart = Eigen::Block, -1, 1, false>; Derived = Eigen::Block, -1, -1, false>; Scalar = double]’ 170 | right.noalias() -= tau * tmp * essential.adjoint(); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:304:43: required from ‘void Eigen::HouseholderSequence::evalTo(Dest&, Workspace&) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 303 | dst.bottomRightCorner(cornerSize, cornerSize) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 | .applyHouseholderOnTheRight(essentialVector(k), m_coeffs.coeff(k), workspace.data()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:232:56: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 232 | if(svd.m_computeFullV) m_qr.householderQ().evalTo(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 16, Eigen::Stride<0, 0> > >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 16, Eigen::Stride<0, 0> > > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 16, Eigen::Stride<0, 0> > > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 16, Eigen::Stride<0, 0> >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 16, Eigen::Stride<0, 0> > >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:280:48: required from ‘void Eigen::internal::outer_product_selector_run(Dst&, const Lhs&, const Rhs&, const Func&, const false_type&) [with Dst = Eigen::Block, -1, -1, false>, -1, -1, false>; Lhs = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >; Rhs = Eigen::Transpose, -1, 1, false> >; Func = generic_product_impl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::Transpose, -1, 1, false> >, Eigen::DenseShape, Eigen::DenseShape, 5>::sub]’ 280 | func(dst.col(j), rhsEval.coeff(Index(0),j) * actual_lhs); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:329:41: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/Householder.h:170:21: required from ‘void Eigen::MatrixBase::applyHouseholderOnTheRight(const EssentialPart&, const Scalar&, Scalar*) [with EssentialPart = Eigen::Block, -1, 1, false>; Derived = Eigen::Block, -1, -1, false>; Scalar = double]’ 170 | right.noalias() -= tau * tmp * essential.adjoint(); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:304:43: required from ‘void Eigen::HouseholderSequence::evalTo(Dest&, Workspace&) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 303 | dst.bottomRightCorner(cornerSize, cornerSize) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 | .applyHouseholderOnTheRight(essentialVector(k), m_coeffs.coeff(k), workspace.data()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:232:56: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 232 | if(svd.m_computeFullV) m_qr.householderQ().evalTo(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, -1, false>, 1, -1, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:774:20: required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Map, 0, Eigen::Stride<0, 0> >; SrcXprType = Eigen::Block, -1, -1, false>, 1, -1, false>; Functor = add_assign_op]’ 774 | SrcEvaluatorType srcEvaluator(src); | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31: required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Map, 0, Eigen::Stride<0, 0> >; SrcXprType = Eigen::Block, -1, -1, false>, 1, -1, false>; Functor = Eigen::internal::add_assign_op; Weak = void]’ 954 | call_dense_assignment_loop(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Map, 0, Eigen::Stride<0, 0> >; Src = Eigen::Block, -1, -1, false>, 1, -1, false>; Func = add_assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:858:27: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Map, 0, Eigen::Stride<0, 0> >; Src = Eigen::Block, -1, -1, false>, 1, -1, false>; Func = add_assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 858 | call_assignment_no_alias(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:177:18: required from ‘Derived& Eigen::MatrixBase::operator+=(const Eigen::MatrixBase&) [with OtherDerived = Eigen::Block, -1, -1, false>, 1, -1, false>; Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >]’ 177 | call_assignment(derived(), other.derived(), internal::add_assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/Householder.h:130:9: required from ‘void Eigen::MatrixBase::applyHouseholderOnTheLeft(const EssentialPart&, const Scalar&, Scalar*) [with EssentialPart = Eigen::Block, -1, 1, false>; Derived = Eigen::Block, -1, -1, false>; Scalar = double]’ 130 | tmp += this->row(0); | ~~~~^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:307:42: required from ‘void Eigen::HouseholderSequence::evalTo(Dest&, Workspace&) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 306 | dst.bottomRightCorner(cornerSize, cornerSize) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 | .applyHouseholderOnTheLeft(essentialVector(k), m_coeffs.coeff(k), workspace.data()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:232:56: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 232 | if(svd.m_computeFullV) m_qr.householderQ().evalTo(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Transpose, Eigen::DiagonalWrapper >, 1>, 1, -1, false> >, const Eigen::Block >, -1, 1, false>, -1, 1, true> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Transpose, Eigen::DiagonalWrapper >, 1>, 1, -1, false> >, const Eigen::Block >, -1, 1, false>, -1, 1, true> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Transpose, Eigen::DiagonalWrapper >, 1>, 1, -1, false> >, const Eigen::Block >, -1, 1, false>, -1, 1, true> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Transpose, Eigen::DiagonalWrapper >, 1>, 1, -1, false> >, const Eigen::Block >, -1, 1, false>, -1, 1, true>, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Transpose, Eigen::DiagonalWrapper >, 1>, 1, -1, false> >, const Eigen::Block >, -1, 1, false>, -1, 1, true> >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:50:56: required from ‘static Eigen::internal::dot_nocheck::ResScalar Eigen::internal::dot_nocheck::run(const Eigen::MatrixBase&, const Eigen::MatrixBase&) [with T = Eigen::Block, Eigen::DiagonalWrapper >, 1>, 1, -1, false>; U = Eigen::Block >, -1, 1, false>, -1, 1, true>; ResScalar = double]’ 50 | return a.transpose().template binaryExpr(b).sum(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:84:58: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Product, Eigen::DiagonalWrapper >, 1>; Rhs = Eigen::Transpose >; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>]’ 148 | generic_product_impl::evalTo(dst, src.lhs(), src.rhs()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 797 | internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 594 | _set_noalias(other); | ~~~~~~~~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 423 | : Base(other.derived()) | ^ GetIndCEScoresCPPnewInd.cpp:23:44: required from here 23 | return(svdMat.matrixV()*Sinv.asDiagonal()*svdMat.matrixU().transpose()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::DiagonalWrapper >, 1>, 1, -1, false>, 1, -1, true> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::DiagonalWrapper >, 1>, 1, -1, false>, 1, -1, true> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, Eigen::DiagonalWrapper >, 1>, 1, -1, false>, 1, -1, true> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl, Eigen::DiagonalWrapper >, 1>, 1, -1, false>, 1, -1, true>, Eigen::Dense>’ 118 | template class TransposeImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose, Eigen::DiagonalWrapper >, 1>, 1, -1, false>, 1, -1, true> >’ 52 | template class Transpose | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:50:23: required from ‘static Eigen::internal::dot_nocheck::ResScalar Eigen::internal::dot_nocheck::run(const Eigen::MatrixBase&, const Eigen::MatrixBase&) [with T = Eigen::Block, Eigen::DiagonalWrapper >, 1>, 1, -1, false>, 1, -1, true>; U = Eigen::Block >, -1, 1, false>; ResScalar = double]’ 50 | return a.transpose().template binaryExpr(b).sum(); | ~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:84:58: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Product, Eigen::DiagonalWrapper >, 1>; Rhs = Eigen::Transpose >; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>]’ 148 | generic_product_impl::evalTo(dst, src.lhs(), src.rhs()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 797 | internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 594 | _set_noalias(other); | ~~~~~~~~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 423 | : Base(other.derived()) | ^ GetIndCEScoresCPPnewInd.cpp:23:44: required from here 23 | return(svdMat.matrixV()*Sinv.asDiagonal()*svdMat.matrixU().transpose()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Transpose, Eigen::DiagonalWrapper >, 1>, 1, -1, false>, 1, -1, true> >, const Eigen::Block >, -1, 1, false> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Transpose, Eigen::DiagonalWrapper >, 1>, 1, -1, false>, 1, -1, true> >, const Eigen::Block >, -1, 1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Transpose, Eigen::DiagonalWrapper >, 1>, 1, -1, false>, 1, -1, true> >, const Eigen::Block >, -1, 1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Transpose, Eigen::DiagonalWrapper >, 1>, 1, -1, false>, 1, -1, true> >, const Eigen::Block >, -1, 1, false>, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Transpose, Eigen::DiagonalWrapper >, 1>, 1, -1, false>, 1, -1, true> >, const Eigen::Block >, -1, 1, false> >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:50:56: required from ‘static Eigen::internal::dot_nocheck::ResScalar Eigen::internal::dot_nocheck::run(const Eigen::MatrixBase&, const Eigen::MatrixBase&) [with T = Eigen::Block, Eigen::DiagonalWrapper >, 1>, 1, -1, false>, 1, -1, true>; U = Eigen::Block >, -1, 1, false>; ResScalar = double]’ 50 | return a.transpose().template binaryExpr(b).sum(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:84:58: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Product, Eigen::DiagonalWrapper >, 1>; Rhs = Eigen::Transpose >; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>]’ 148 | generic_product_impl::evalTo(dst, src.lhs(), src.rhs()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 797 | internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 594 | _set_noalias(other); | ~~~~~~~~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 423 | : Base(other.derived()) | ^ GetIndCEScoresCPPnewInd.cpp:23:44: required from here 23 | return(svdMat.matrixV()*Sinv.asDiagonal()*svdMat.matrixU().transpose()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:333: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h: In instantiation of ‘class Eigen::internal::gemv_traits’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:87:38: required from ‘struct Eigen::internal::general_matrix_vector_product, 0, false, double, Eigen::internal::const_blas_data_mapper, false, 0>’ 87 | typedef typename Traits::LhsPacket LhsPacket; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:253:134: required from ‘static void Eigen::internal::gemv_dense_selector<2, 0, true>::run(const Lhs&, const Rhs&, Dest&, const typename Dest::Scalar&) [with Lhs = Eigen::Transpose > >; Rhs = Eigen::Transpose, Eigen::DiagonalWrapper >, 1>, 1, -1, false> >; Dest = Eigen::Transpose, 1, -1, false> >; typename Dest::Scalar = double]’ 252 | general_matrix_vector_product | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 | ::run( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 254 | actualLhs.rows(), actualLhs.cols(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 | LhsMapper(actualLhs.data(), actualLhs.outerStride()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 | RhsMapper(actualRhs.data(), actualRhs.innerStride()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 | dest.data(), 1, | ~~~~~~~~~~~~~~~ 258 | compatibleAlpha); | ~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:207:12: required from ‘static void Eigen::internal::gemv_dense_selector<1, StorageOrder, BlasCompatible>::run(const Lhs&, const Rhs&, Dest&, const typename Dest::Scalar&) [with Lhs = Eigen::Block, Eigen::DiagonalWrapper >, 1>, 1, -1, false>; Rhs = Eigen::Transpose >; Dest = Eigen::Block, 1, -1, false>; int StorageOrder = 1; bool BlasCompatible = true; typename Dest::Scalar = double]’ 206 | gemv_dense_selector | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 | ::run(rhs.transpose(), lhs.transpose(), destT, alpha); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:388:34: required from ‘static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Block, 1, -1, false>; Lhs = const Eigen::Block, Eigen::DiagonalWrapper >, 1>, 1, -1, false>; Rhs = Eigen::Transpose >; Scalar = double]’ 385 | internal::gemv_dense_selector::HasUsableDirectAccess) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 | >::run(actual_lhs, actual_rhs, dst, alpha); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:486:24: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Product, Eigen::DiagonalWrapper >, 1>; Rhs = Eigen::Transpose >; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>]’ 148 | generic_product_impl::evalTo(dst, src.lhs(), src.rhs()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 797 | internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 594 | _set_noalias(other); | ~~~~~~~~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 423 | : Base(other.derived()) | ^ GetIndCEScoresCPPnewInd.cpp:23:44: required from here 23 | return(svdMat.matrixV()*Sinv.asDiagonal()*svdMat.matrixU().transpose()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 44 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 44 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 44 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 44 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 45 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 45 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 45 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 45 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 46 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 46 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 46 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 46 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 51 | Vectorizable = unpacket_traits<_LhsPacket>::vectorizable && | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 52 | unpacket_traits<_RhsPacket>::vectorizable && | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 53 | int(unpacket_traits<_LhsPacket>::size)==int(unpacket_traits<_RhsPacket>::size), | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 53 | int(unpacket_traits<_LhsPacket>::size)==int(unpacket_traits<_RhsPacket>::size), | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 54 | LhsPacketSize = Vectorizable ? unpacket_traits<_LhsPacket>::size : 1, | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 55 | RhsPacketSize = Vectorizable ? unpacket_traits<_RhsPacket>::size : 1, | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 56 | ResPacketSize = Vectorizable ? unpacket_traits<_ResPacket>::size : 1 | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 59 | typedef typename conditional::type LhsPacket; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 60 | typedef typename conditional::type RhsPacket; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 61 | typedef typename conditional::type ResPacket; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h: In instantiation of ‘class Eigen::internal::gemv_traits’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:91:42: required from ‘struct Eigen::internal::general_matrix_vector_product, 0, false, double, Eigen::internal::const_blas_data_mapper, false, 0>’ 91 | typedef typename HalfTraits::LhsPacket LhsPacketHalf; | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:253:134: required from ‘static void Eigen::internal::gemv_dense_selector<2, 0, true>::run(const Lhs&, const Rhs&, Dest&, const typename Dest::Scalar&) [with Lhs = Eigen::Transpose > >; Rhs = Eigen::Transpose, Eigen::DiagonalWrapper >, 1>, 1, -1, false> >; Dest = Eigen::Transpose, 1, -1, false> >; typename Dest::Scalar = double]’ 252 | general_matrix_vector_product | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 | ::run( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 254 | actualLhs.rows(), actualLhs.cols(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 | LhsMapper(actualLhs.data(), actualLhs.outerStride()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 | RhsMapper(actualRhs.data(), actualRhs.innerStride()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 | dest.data(), 1, | ~~~~~~~~~~~~~~~ 258 | compatibleAlpha); | ~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:207:12: required from ‘static void Eigen::internal::gemv_dense_selector<1, StorageOrder, BlasCompatible>::run(const Lhs&, const Rhs&, Dest&, const typename Dest::Scalar&) [with Lhs = Eigen::Block, Eigen::DiagonalWrapper >, 1>, 1, -1, false>; Rhs = Eigen::Transpose >; Dest = Eigen::Block, 1, -1, false>; int StorageOrder = 1; bool BlasCompatible = true; typename Dest::Scalar = double]’ 206 | gemv_dense_selector | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 | ::run(rhs.transpose(), lhs.transpose(), destT, alpha); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:388:34: required from ‘static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Block, 1, -1, false>; Lhs = const Eigen::Block, Eigen::DiagonalWrapper >, 1>, 1, -1, false>; Rhs = Eigen::Transpose >; Scalar = double]’ 385 | internal::gemv_dense_selector::HasUsableDirectAccess) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 | >::run(actual_lhs, actual_rhs, dst, alpha); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:486:24: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Product, Eigen::DiagonalWrapper >, 1>; Rhs = Eigen::Transpose >; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>]’ 148 | generic_product_impl::evalTo(dst, src.lhs(), src.rhs()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 797 | internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 594 | _set_noalias(other); | ~~~~~~~~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 423 | : Base(other.derived()) | ^ GetIndCEScoresCPPnewInd.cpp:23:44: required from here 23 | return(svdMat.matrixV()*Sinv.asDiagonal()*svdMat.matrixU().transpose()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 44 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 44 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 44 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 44 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 45 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 45 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 45 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 45 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 46 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 46 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 46 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 46 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 51 | Vectorizable = unpacket_traits<_LhsPacket>::vectorizable && | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 52 | unpacket_traits<_RhsPacket>::vectorizable && | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 53 | int(unpacket_traits<_LhsPacket>::size)==int(unpacket_traits<_RhsPacket>::size), | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 53 | int(unpacket_traits<_LhsPacket>::size)==int(unpacket_traits<_RhsPacket>::size), | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 54 | LhsPacketSize = Vectorizable ? unpacket_traits<_LhsPacket>::size : 1, | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 55 | RhsPacketSize = Vectorizable ? unpacket_traits<_RhsPacket>::size : 1, | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 56 | ResPacketSize = Vectorizable ? unpacket_traits<_ResPacket>::size : 1 | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 59 | typedef typename conditional::type LhsPacket; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 60 | typedef typename conditional::type RhsPacket; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 61 | typedef typename conditional::type ResPacket; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h: In instantiation of ‘class Eigen::internal::gemv_traits’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:95:45: required from ‘struct Eigen::internal::general_matrix_vector_product, 0, false, double, Eigen::internal::const_blas_data_mapper, false, 0>’ 95 | typedef typename QuarterTraits::LhsPacket LhsPacketQuarter; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:253:134: required from ‘static void Eigen::internal::gemv_dense_selector<2, 0, true>::run(const Lhs&, const Rhs&, Dest&, const typename Dest::Scalar&) [with Lhs = Eigen::Transpose > >; Rhs = Eigen::Transpose, Eigen::DiagonalWrapper >, 1>, 1, -1, false> >; Dest = Eigen::Transpose, 1, -1, false> >; typename Dest::Scalar = double]’ 252 | general_matrix_vector_product | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 | ::run( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 254 | actualLhs.rows(), actualLhs.cols(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 | LhsMapper(actualLhs.data(), actualLhs.outerStride()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 | RhsMapper(actualRhs.data(), actualRhs.innerStride()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 | dest.data(), 1, | ~~~~~~~~~~~~~~~ 258 | compatibleAlpha); | ~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:207:12: required from ‘static void Eigen::internal::gemv_dense_selector<1, StorageOrder, BlasCompatible>::run(const Lhs&, const Rhs&, Dest&, const typename Dest::Scalar&) [with Lhs = Eigen::Block, Eigen::DiagonalWrapper >, 1>, 1, -1, false>; Rhs = Eigen::Transpose >; Dest = Eigen::Block, 1, -1, false>; int StorageOrder = 1; bool BlasCompatible = true; typename Dest::Scalar = double]’ 206 | gemv_dense_selector | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 | ::run(rhs.transpose(), lhs.transpose(), destT, alpha); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:388:34: required from ‘static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Block, 1, -1, false>; Lhs = const Eigen::Block, Eigen::DiagonalWrapper >, 1>, 1, -1, false>; Rhs = Eigen::Transpose >; Scalar = double]’ 385 | internal::gemv_dense_selector::HasUsableDirectAccess) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 | >::run(actual_lhs, actual_rhs, dst, alpha); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:486:24: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Product, Eigen::DiagonalWrapper >, 1>; Rhs = Eigen::Transpose >; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>]’ 148 | generic_product_impl::evalTo(dst, src.lhs(), src.rhs()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 797 | internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 594 | _set_noalias(other); | ~~~~~~~~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 423 | : Base(other.derived()) | ^ GetIndCEScoresCPPnewInd.cpp:23:44: required from here 23 | return(svdMat.matrixV()*Sinv.asDiagonal()*svdMat.matrixU().transpose()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 44 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 44 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 44 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 44 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 45 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 45 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 45 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 45 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 46 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 46 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 46 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 46 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 51 | Vectorizable = unpacket_traits<_LhsPacket>::vectorizable && | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 52 | unpacket_traits<_RhsPacket>::vectorizable && | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 53 | int(unpacket_traits<_LhsPacket>::size)==int(unpacket_traits<_RhsPacket>::size), | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 53 | int(unpacket_traits<_LhsPacket>::size)==int(unpacket_traits<_RhsPacket>::size), | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 54 | LhsPacketSize = Vectorizable ? unpacket_traits<_LhsPacket>::size : 1, | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 55 | RhsPacketSize = Vectorizable ? unpacket_traits<_RhsPacket>::size : 1, | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 56 | ResPacketSize = Vectorizable ? unpacket_traits<_ResPacket>::size : 1 | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 59 | typedef typename conditional::type LhsPacket; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 60 | typedef typename conditional::type RhsPacket; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 61 | typedef typename conditional::type ResPacket; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 2, Eigen::Stride<0, 0> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 2, Eigen::Stride<0, 0> >, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 2, Eigen::Stride<0, 0> >, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 2, Eigen::Stride<0, 0> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 2, Eigen::Stride<0, 0> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 2, Eigen::Stride<0, 0> >, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Product, Eigen::DiagonalWrapper >, 1>; Rhs = Eigen::Transpose >; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>]’ 148 | generic_product_impl::evalTo(dst, src.lhs(), src.rhs()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 797 | internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 594 | _set_noalias(other); | ~~~~~~~~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 423 | : Base(other.derived()) | ^ GetIndCEScoresCPPnewInd.cpp:23:44: required from here 23 | return(svdMat.matrixV()*Sinv.asDiagonal()*svdMat.matrixU().transpose()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 2, Eigen::Stride<0, 0> > >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 2, Eigen::Stride<0, 0> > > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 2, Eigen::Stride<0, 0> > > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 2, Eigen::Stride<0, 0> >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 2, Eigen::Stride<0, 0> > >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:296:40: required from ‘static void Eigen::internal::gemv_dense_selector<2, 0, true>::run(const Lhs&, const Rhs&, Dest&, const typename Dest::Scalar&) [with Lhs = Eigen::Transpose > >; Rhs = Eigen::Transpose, Eigen::DiagonalWrapper >, 1>, 1, -1, false> >; Dest = Eigen::Transpose, 1, -1, false> >; typename Dest::Scalar = double]’ 296 | dest.matrix() += actualAlpha * MappedDest(actualDestPtr, dest.size()); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:207:12: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Product, Eigen::DiagonalWrapper >, 1>; Rhs = Eigen::Transpose >; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>]’ 148 | generic_product_impl::evalTo(dst, src.lhs(), src.rhs()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 797 | internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 594 | _set_noalias(other); | ~~~~~~~~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 423 | : Base(other.derived()) | ^ GetIndCEScoresCPPnewInd.cpp:23:44: required from here 23 | return(svdMat.matrixV()*Sinv.asDiagonal()*svdMat.matrixU().transpose()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:330: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of ‘class Eigen::internal::gebp_traits’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:147:40: required from ‘void Eigen::internal::evaluateProductBlockingSizesHeuristic(Index&, Index&, Index&, Index) [with LhsScalar = double; RhsScalar = double; int KcFactor = 1; Index = long int]’ 147 | typedef typename Traits::ResScalar ResScalar; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:342:81: required from ‘void Eigen::internal::computeProductBlockingSizes(Index&, Index&, Index&, Index) [with LhsScalar = double; RhsScalar = double; int KcFactor = 1; Index = long int]’ 342 | evaluateProductBlockingSizesHeuristic(k, m, n, num_threads); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:355:66: required from ‘Eigen::internal::gemm_blocking_space::gemm_blocking_space(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, bool) [with int StorageOrder = 0; _LhsScalar = double; _RhsScalar = double; int MaxRows = -1; int MaxCols = -1; int MaxDepth = -1; int KcFactor = 1; Eigen::Index = long int]’ 355 | computeProductBlockingSizes(this->m_kc, this->m_mc, this->m_nc, num_threads); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:507:18: required from ‘static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix; Lhs = Eigen::Product, Eigen::DiagonalWrapper >, 1>; Rhs = Eigen::Transpose >; Scalar = double]’ 507 | BlockingType blocking(dst.rows(), dst.cols(), lhs.cols(), 1, true); | ^~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:445:20: required from ‘static void Eigen::internal::generic_product_impl::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix; Lhs = Eigen::Product, Eigen::DiagonalWrapper >, 1>; Rhs = Eigen::Transpose >]’ 445 | scaleAndAddTo(dst, lhs, rhs, Scalar(1)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Product, Eigen::DiagonalWrapper >, 1>; Rhs = Eigen::Transpose >; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>]’ 148 | generic_product_impl::evalTo(dst, src.lhs(), src.rhs()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 797 | internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 594 | _set_noalias(other); | ~~~~~~~~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 423 | : Base(other.derived()) | ^ GetIndCEScoresCPPnewInd.cpp:23:44: required from here 23 | return(svdMat.matrixV()*Sinv.asDiagonal()*svdMat.matrixU().transpose()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:425:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 425 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:425:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 425 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:425:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 425 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:425:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 425 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:426:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 426 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:426:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 426 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:426:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 426 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:426:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 426 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:427:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 427 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:427:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 427 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:427:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 427 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:427:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 427 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:49: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 432 | Vectorizable = unpacket_traits<_LhsPacket>::vectorizable && unpacket_traits<_RhsPacket>::vectorizable, | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:49: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:49: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:49: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:94: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 432 | Vectorizable = unpacket_traits<_LhsPacket>::vectorizable && unpacket_traits<_RhsPacket>::vectorizable, | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:94: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:94: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:94: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:433:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 433 | LhsPacketSize = Vectorizable ? unpacket_traits<_LhsPacket>::size : 1, | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:433:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:433:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:433:65: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:434:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 434 | RhsPacketSize = Vectorizable ? unpacket_traits<_RhsPacket>::size : 1, | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:434:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:434:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:434:65: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:435:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 435 | ResPacketSize = Vectorizable ? unpacket_traits<_ResPacket>::size : 1, | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:435:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:435:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:435:65: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:460:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 460 | typedef typename conditional::type LhsPacket; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:460:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:460:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:460:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:461:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 461 | typedef typename conditional::type RhsPacket; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:461:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:461:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:461:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:462:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 462 | typedef typename conditional::type ResPacket; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:462:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:462:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:462:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 465 | typedef QuadPacket RhsPacketx4; | ^~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of ‘struct Eigen::internal::gemm_pack_rhs, 4, 1, false, false>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:81:75: required from ‘static void Eigen::internal::general_matrix_matrix_product::run(Index, Index, Index, const LhsScalar*, Index, const RhsScalar*, Index, ResScalar*, Index, Index, ResScalar, Eigen::internal::level3_blocking&, Eigen::internal::GemmParallelInfo*) [with Index = long int; LhsScalar = double; int LhsStorageOrder = 0; bool ConjugateLhs = false; RhsScalar = double; int RhsStorageOrder = 1; bool ConjugateRhs = false; int ResInnerStride = 1; ResScalar = double]’ 81 | gemm_pack_rhs pack_rhs; | ^~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:230:14: required from ‘void Eigen::internal::gemm_functor::operator()(Index, Index, Index, Index, Eigen::internal::GemmParallelInfo*) const [with Scalar = double; Index = long int; Gemm = Eigen::internal::general_matrix_matrix_product; Lhs = Eigen::Matrix; Rhs = Eigen::Transpose >; Dest = Eigen::Matrix; BlockingType = Eigen::internal::gemm_blocking_space<0, double, double, -1, -1, -1, 1, false>]’ 230 | Gemm::run(rows, cols, m_lhs.cols(), | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ 231 | &m_lhs.coeffRef(row,0), m_lhs.outerStride(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 | &m_rhs.coeffRef(0,col), m_rhs.outerStride(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 | (Scalar*)&(m_dest.coeffRef(row,col)), m_dest.innerStride(), m_dest.outerStride(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 | m_actualAlpha, m_blocking, info); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/Parallelizer.h:114:7: required from ‘void Eigen::internal::parallelize_gemm(const Functor&, Index, Index, Index, bool) [with bool Condition = true; Functor = gemm_functor, Eigen::Matrix, Eigen::Transpose >, Eigen::Matrix, gemm_blocking_space<0, double, double, -1, -1, -1, 1, false> >; Index = long int]’ 114 | func(0,rows, 0,cols); | ~~~~^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:509:9: required from ‘static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix; Lhs = Eigen::Product, Eigen::DiagonalWrapper >, 1>; Rhs = Eigen::Transpose >; Scalar = double]’ 508 | internal::parallelize_gemm<(Dest::MaxRowsAtCompileTime>32 || Dest::MaxRowsAtCompileTime==Dynamic)> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 | (GemmFunctor(lhs, rhs, dst, actualAlpha, blocking), a_lhs.rows(), a_rhs.cols(), a_lhs.cols(), Dest::Flags&RowMajorBit); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:445:20: required from ‘static void Eigen::internal::generic_product_impl::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix; Lhs = Eigen::Product, Eigen::DiagonalWrapper >, 1>; Rhs = Eigen::Transpose >]’ 445 | scaleAndAddTo(dst, lhs, rhs, Scalar(1)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Product, Eigen::DiagonalWrapper >, 1>; Rhs = Eigen::Transpose >; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>]’ 148 | generic_product_impl::evalTo(dst, src.lhs(), src.rhs()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 797 | internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 594 | _set_noalias(other); | ~~~~~~~~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 423 | : Base(other.derived()) | ^ GetIndCEScoresCPPnewInd.cpp:23:44: required from here 23 | return(svdMat.matrixV()*Sinv.asDiagonal()*svdMat.matrixU().transpose()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2504:50: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 2504 | typedef typename unpacket_traits::half HalfPacket; | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2505:82: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 2505 | typedef typename unpacket_traits::half>::half QuarterPacket; | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2505:82: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2508:56: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 2508 | HalfPacketSize = unpacket_traits::size, | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2508:56: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2509:70: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 2509 | QuarterPacketSize = unpacket_traits::size}; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2509:70: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2509:70: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of ‘class Eigen::internal::gebp_traits’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1080:42: required from ‘struct Eigen::internal::gebp_kernel, 4, 4, false, false>’ 1080 | typedef typename HalfTraits::LhsPacket LhsPacketHalf; | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:82:107: required from ‘static void Eigen::internal::general_matrix_matrix_product::run(Index, Index, Index, const LhsScalar*, Index, const RhsScalar*, Index, ResScalar*, Index, Index, ResScalar, Eigen::internal::level3_blocking&, Eigen::internal::GemmParallelInfo*) [with Index = long int; LhsScalar = double; int LhsStorageOrder = 0; bool ConjugateLhs = false; RhsScalar = double; int RhsStorageOrder = 1; bool ConjugateRhs = false; int ResInnerStride = 1; ResScalar = double]’ 82 | gebp_kernel gebp; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:230:14: required from ‘void Eigen::internal::gemm_functor::operator()(Index, Index, Index, Index, Eigen::internal::GemmParallelInfo*) const [with Scalar = double; Index = long int; Gemm = Eigen::internal::general_matrix_matrix_product; Lhs = Eigen::Matrix; Rhs = Eigen::Transpose >; Dest = Eigen::Matrix; BlockingType = Eigen::internal::gemm_blocking_space<0, double, double, -1, -1, -1, 1, false>]’ 230 | Gemm::run(rows, cols, m_lhs.cols(), | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ 231 | &m_lhs.coeffRef(row,0), m_lhs.outerStride(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 | &m_rhs.coeffRef(0,col), m_rhs.outerStride(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 | (Scalar*)&(m_dest.coeffRef(row,col)), m_dest.innerStride(), m_dest.outerStride(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 | m_actualAlpha, m_blocking, info); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/Parallelizer.h:114:7: required from ‘void Eigen::internal::parallelize_gemm(const Functor&, Index, Index, Index, bool) [with bool Condition = true; Functor = gemm_functor, Eigen::Matrix, Eigen::Transpose >, Eigen::Matrix, gemm_blocking_space<0, double, double, -1, -1, -1, 1, false> >; Index = long int]’ 114 | func(0,rows, 0,cols); | ~~~~^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:509:9: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Product, Eigen::DiagonalWrapper >, 1>; Rhs = Eigen::Transpose >; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>]’ 148 | generic_product_impl::evalTo(dst, src.lhs(), src.rhs()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 797 | internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 594 | _set_noalias(other); | ~~~~~~~~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 423 | : Base(other.derived()) | ^ GetIndCEScoresCPPnewInd.cpp:23:44: required from here 23 | return(svdMat.matrixV()*Sinv.asDiagonal()*svdMat.matrixU().transpose()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:425:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 425 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:425:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 425 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:425:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 425 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:425:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 425 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:426:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 426 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:426:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 426 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:426:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 426 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:426:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 426 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:427:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 427 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:427:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 427 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:427:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 427 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:427:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 427 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:49: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 432 | Vectorizable = unpacket_traits<_LhsPacket>::vectorizable && unpacket_traits<_RhsPacket>::vectorizable, | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:49: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:49: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:49: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:94: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 432 | Vectorizable = unpacket_traits<_LhsPacket>::vectorizable && unpacket_traits<_RhsPacket>::vectorizable, | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:94: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:94: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:94: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:433:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 433 | LhsPacketSize = Vectorizable ? unpacket_traits<_LhsPacket>::size : 1, | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:433:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:433:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:433:65: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:434:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 434 | RhsPacketSize = Vectorizable ? unpacket_traits<_RhsPacket>::size : 1, | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:434:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:434:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:434:65: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:435:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 435 | ResPacketSize = Vectorizable ? unpacket_traits<_ResPacket>::size : 1, | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:435:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:435:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:435:65: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:460:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 460 | typedef typename conditional::type LhsPacket; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:460:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:460:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:460:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:461:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 461 | typedef typename conditional::type RhsPacket; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:461:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:461:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:461:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:462:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 462 | typedef typename conditional::type ResPacket; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:462:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:462:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:462:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 465 | typedef QuadPacket RhsPacketx4; | ^~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of ‘class Eigen::internal::gebp_traits’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1085:45: required from ‘struct Eigen::internal::gebp_kernel, 4, 4, false, false>’ 1085 | typedef typename QuarterTraits::LhsPacket LhsPacketQuarter; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:82:107: required from ‘static void Eigen::internal::general_matrix_matrix_product::run(Index, Index, Index, const LhsScalar*, Index, const RhsScalar*, Index, ResScalar*, Index, Index, ResScalar, Eigen::internal::level3_blocking&, Eigen::internal::GemmParallelInfo*) [with Index = long int; LhsScalar = double; int LhsStorageOrder = 0; bool ConjugateLhs = false; RhsScalar = double; int RhsStorageOrder = 1; bool ConjugateRhs = false; int ResInnerStride = 1; ResScalar = double]’ 82 | gebp_kernel gebp; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:230:14: required from ‘void Eigen::internal::gemm_functor::operator()(Index, Index, Index, Index, Eigen::internal::GemmParallelInfo*) const [with Scalar = double; Index = long int; Gemm = Eigen::internal::general_matrix_matrix_product; Lhs = Eigen::Matrix; Rhs = Eigen::Transpose >; Dest = Eigen::Matrix; BlockingType = Eigen::internal::gemm_blocking_space<0, double, double, -1, -1, -1, 1, false>]’ 230 | Gemm::run(rows, cols, m_lhs.cols(), | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ 231 | &m_lhs.coeffRef(row,0), m_lhs.outerStride(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 | &m_rhs.coeffRef(0,col), m_rhs.outerStride(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 | (Scalar*)&(m_dest.coeffRef(row,col)), m_dest.innerStride(), m_dest.outerStride(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 | m_actualAlpha, m_blocking, info); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/Parallelizer.h:114:7: required from ‘void Eigen::internal::parallelize_gemm(const Functor&, Index, Index, Index, bool) [with bool Condition = true; Functor = gemm_functor, Eigen::Matrix, Eigen::Transpose >, Eigen::Matrix, gemm_blocking_space<0, double, double, -1, -1, -1, 1, false> >; Index = long int]’ 114 | func(0,rows, 0,cols); | ~~~~^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:509:9: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Product, Eigen::DiagonalWrapper >, 1>; Rhs = Eigen::Transpose >; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>]’ 148 | generic_product_impl::evalTo(dst, src.lhs(), src.rhs()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 797 | internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 594 | _set_noalias(other); | ~~~~~~~~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 423 | : Base(other.derived()) | ^ GetIndCEScoresCPPnewInd.cpp:23:44: required from here 23 | return(svdMat.matrixV()*Sinv.asDiagonal()*svdMat.matrixU().transpose()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:425:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 425 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:425:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 425 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:425:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 425 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:425:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 425 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:426:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 426 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:426:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 426 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:426:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 426 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:426:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 426 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:427:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 427 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:427:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 427 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:427:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 427 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:427:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 427 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:49: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 432 | Vectorizable = unpacket_traits<_LhsPacket>::vectorizable && unpacket_traits<_RhsPacket>::vectorizable, | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:49: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:49: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:49: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:94: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 432 | Vectorizable = unpacket_traits<_LhsPacket>::vectorizable && unpacket_traits<_RhsPacket>::vectorizable, | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:94: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:94: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:94: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:433:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 433 | LhsPacketSize = Vectorizable ? unpacket_traits<_LhsPacket>::size : 1, | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:433:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:433:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:433:65: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:434:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 434 | RhsPacketSize = Vectorizable ? unpacket_traits<_RhsPacket>::size : 1, | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:434:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:434:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:434:65: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:435:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 435 | ResPacketSize = Vectorizable ? unpacket_traits<_ResPacket>::size : 1, | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:435:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:435:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:435:65: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:460:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 460 | typedef typename conditional::type LhsPacket; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:460:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:460:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:460:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:461:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 461 | typedef typename conditional::type RhsPacket; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:461:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:461:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:461:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:462:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 462 | typedef typename conditional::type ResPacket; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:462:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:462:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:462:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 465 | typedef QuadPacket RhsPacketx4; | ^~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true> >; Eigen::Index = long int]’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:243:63: required from ‘static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Evaluator&, const Func&, const XprType&) [with XprType = Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true> >; Func = Eigen::internal::scalar_sum_op; Evaluator = Eigen::internal::redux_evaluator, const Eigen::Block, -1, 1, true> > >; Scalar = double]’ 243 | const Index alignedStart = internal::first_default_aligned(xpr); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true> >; typename Eigen::internal::traits::Scalar = double]’ 418 | return internal::redux_impl::run(thisEval, func, derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true> >; typename Eigen::internal::traits::Scalar = double]’ 463 | return derived().redux(Eigen::internal::scalar_sum_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:98:46: required from ‘typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::squaredNorm() const [with Derived = Eigen::Block, -1, 1, true>; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]’ 98 | return numext::real((*this).cwiseAbs2().sum()); | ~~~~~~~~~~~~~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:110:23: required from ‘typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::norm() const [with Derived = Eigen::Block, -1, 1, true>; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]’ 110 | return numext::sqrt(squaredNorm()); | ^~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/QR/ColPivHouseholderQR.h:507:52: required from ‘void Eigen::ColPivHouseholderQR::computeInPlace() [with _MatrixType = Eigen::Matrix]’ 507 | m_colNormsDirect.coeffRef(k) = m_qr.col(k).norm(); | ~~~~~~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/QR/ColPivHouseholderQR.h:477:3: required from ‘Eigen::ColPivHouseholderQR<_MatrixType>& Eigen::ColPivHouseholderQR::compute(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix]’ 477 | computeInPlace(); | ^~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:229:19: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 229 | m_qr.compute(m_adjoint); | ~~~~~~~~~~~~^~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 654 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true>, -1, 1, false> >; Eigen::Index = long int]’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:243:63: required from ‘static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Evaluator&, const Func&, const XprType&) [with XprType = Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true>, -1, 1, false> >; Func = Eigen::internal::scalar_sum_op; Evaluator = Eigen::internal::redux_evaluator, const Eigen::Block, -1, 1, true>, -1, 1, false> > >; Scalar = double]’ 243 | const Index alignedStart = internal::first_default_aligned(xpr); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true>, -1, 1, false> >; typename Eigen::internal::traits::Scalar = double]’ 418 | return internal::redux_impl::run(thisEval, func, derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true>, -1, 1, false> >; typename Eigen::internal::traits::Scalar = double]’ 463 | return derived().redux(Eigen::internal::scalar_sum_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:98:46: required from ‘typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::squaredNorm() const [with Derived = Eigen::Block, -1, 1, true>, -1, 1, false>; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]’ 98 | return numext::real((*this).cwiseAbs2().sum()); | ~~~~~~~~~~~~~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:110:23: required from ‘typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::norm() const [with Derived = Eigen::Block, -1, 1, true>, -1, 1, false>; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]’ 110 | return numext::sqrt(squaredNorm()); | ^~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/QR/ColPivHouseholderQR.h:567:77: required from ‘void Eigen::ColPivHouseholderQR::computeInPlace() [with _MatrixType = Eigen::Matrix]’ 567 | m_colNormsDirect.coeffRef(j) = m_qr.col(j).tail(rows - k - 1).norm(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/QR/ColPivHouseholderQR.h:477:3: required from ‘Eigen::ColPivHouseholderQR<_MatrixType>& Eigen::ColPivHouseholderQR::compute(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix]’ 477 | computeInPlace(); | ^~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:229:19: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 229 | m_qr.compute(m_adjoint); | ~~~~~~~~~~~~^~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 654 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, -1, false>, -1, -1, false>, 1, -1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, -1, -1, false>, -1, -1, false>, 1, -1, false>, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, -1, false>, -1, -1, false>, 1, -1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, -1, false>, -1, -1, false>, 1, -1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, -1, false>, -1, -1, false>, 1, -1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, -1, -1, false>, -1, -1, false>, 1, -1, false, true>’ 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/Householder.h:167:19: required from ‘void Eigen::MatrixBase::applyHouseholderOnTheRight(const EssentialPart&, const Scalar&, Scalar*) [with EssentialPart = Eigen::Block, -1, 1, false>; Derived = Eigen::Block, -1, -1, false>; Scalar = double]’ 167 | tmp.noalias() = right * essential; | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:304:43: required from ‘void Eigen::HouseholderSequence::evalTo(Dest&, Workspace&) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 303 | dst.bottomRightCorner(cornerSize, cornerSize) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 | .applyHouseholderOnTheRight(essentialVector(k), m_coeffs.coeff(k), workspace.data()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:232:56: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 232 | if(svd.m_computeFullV) m_qr.householderQ().evalTo(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, false>, -1, 1, true>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, false>, -1, 1, true>, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, false>, -1, 1, true> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, 1, false>, -1, 1, true> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, 1, false>, -1, 1, true>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, -1, 1, false>, -1, 1, true, true>’ 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/Householder.h:167:19: required from ‘void Eigen::MatrixBase::applyHouseholderOnTheRight(const EssentialPart&, const Scalar&, Scalar*) [with EssentialPart = Eigen::Block, -1, 1, false>; Derived = Eigen::Block, -1, -1, false>; Scalar = double]’ 167 | tmp.noalias() = right * essential; | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:304:43: required from ‘void Eigen::HouseholderSequence::evalTo(Dest&, Workspace&) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 303 | dst.bottomRightCorner(cornerSize, cornerSize) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 | .applyHouseholderOnTheRight(essentialVector(k), m_coeffs.coeff(k), workspace.data()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:232:56: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 232 | if(svd.m_computeFullV) m_qr.householderQ().evalTo(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::Matrix > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, Eigen::Matrix > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp, Eigen::Matrix >’ 60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp >::type, internal::no_assignment_operator | ^~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:347:30: required from ‘Derived& Eigen::DenseBase::setConstant(const Scalar&) [with Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >; Scalar = double]’ 347 | return derived() = Constant(rows(), cols(), val); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:548:10: required from ‘Derived& Eigen::DenseBase::setZero() [with Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >]’ 548 | return setConstant(Scalar(0)); | ^~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:349:16: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/Householder.h:129:19: required from ‘void Eigen::MatrixBase::applyHouseholderOnTheLeft(const EssentialPart&, const Scalar&, Scalar*) [with EssentialPart = Eigen::Block, -1, 1, false>; Derived = Eigen::Block, -1, -1, false>; Scalar = double]’ 129 | tmp.noalias() = essential.adjoint() * bottom; | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:307:42: required from ‘void Eigen::HouseholderSequence::evalTo(Dest&, Workspace&) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 306 | dst.bottomRightCorner(cornerSize, cornerSize) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 | .applyHouseholderOnTheLeft(essentialVector(k), m_coeffs.coeff(k), workspace.data()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:232:56: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 232 | if(svd.m_computeFullV) m_qr.householderQ().evalTo(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, false> >, 1, -1, true>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, false> >, 1, -1, true>, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, false> >, 1, -1, true> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, 1, false> >, 1, -1, true> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, 1, false> >, 1, -1, true>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, -1, 1, false> >, 1, -1, true, true>’ 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/Householder.h:129:19: required from ‘void Eigen::MatrixBase::applyHouseholderOnTheLeft(const EssentialPart&, const Scalar&, Scalar*) [with EssentialPart = Eigen::Block, -1, 1, false>; Derived = Eigen::Block, -1, -1, false>; Scalar = double]’ 129 | tmp.noalias() = essential.adjoint() * bottom; | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:307:42: required from ‘void Eigen::HouseholderSequence::evalTo(Dest&, Workspace&) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 306 | dst.bottomRightCorner(cornerSize, cornerSize) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 | .applyHouseholderOnTheLeft(essentialVector(k), m_coeffs.coeff(k), workspace.data()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:232:56: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 232 | if(svd.m_computeFullV) m_qr.householderQ().evalTo(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, -1, false>, -1, -1, false>, -1, 1, true>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, -1, -1, false>, -1, -1, false>, -1, 1, true>, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, -1, false>, -1, -1, false>, -1, 1, true> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, -1, false>, -1, -1, false>, -1, 1, true> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, -1, false>, -1, -1, false>, -1, 1, true>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, -1, -1, false>, -1, -1, false>, -1, 1, true, true>’ 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/Householder.h:129:19: required from ‘void Eigen::MatrixBase::applyHouseholderOnTheLeft(const EssentialPart&, const Scalar&, Scalar*) [with EssentialPart = Eigen::Block, -1, 1, false>; Derived = Eigen::Block, -1, -1, false>; Scalar = double]’ 129 | tmp.noalias() = essential.adjoint() * bottom; | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:307:42: required from ‘void Eigen::HouseholderSequence::evalTo(Dest&, Workspace&) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 306 | dst.bottomRightCorner(cornerSize, cornerSize) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 | .applyHouseholderOnTheLeft(essentialVector(k), m_coeffs.coeff(k), workspace.data()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:232:56: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 232 | if(svd.m_computeFullV) m_qr.householderQ().evalTo(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 1, -1, true> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1043:41: required from ‘struct Eigen::internal::evaluator, 1, -1, true>, 1, -1, false> >’ 1043 | CoeffReadCost = evaluator::CoeffReadCost, | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, 1, -1, true>, 1, -1, false> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:78: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 1, -1, true>, 1, -1, false> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ 739 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8: required from ‘struct Eigen::internal::evaluator, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 1, -1, true>, 1, -1, false> > >’ 722 | struct evaluator > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:774:20: required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, 1, -1, true>, 1, -1, false>; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 1, -1, true>, 1, -1, false> >; Functor = add_assign_op]’ 774 | SrcEvaluatorType srcEvaluator(src); | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:92:55: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 92 | if(forward) make_block_householder_triangular_factor(T, vectors, hCoeffs); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 1, -1, true>, 1, -1, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, 1, -1, true>, 1, -1, false> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:78: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 1, -1, true>, 1, -1, false> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ 739 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8: required from ‘struct Eigen::internal::evaluator, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 1, -1, true>, 1, -1, false> > >’ 722 | struct evaluator > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:774:20: required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, 1, -1, true>, 1, -1, false>; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 1, -1, true>, 1, -1, false> >; Functor = add_assign_op]’ 774 | SrcEvaluatorType srcEvaluator(src); | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31: required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, 1, -1, true>, 1, -1, false>; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 1, -1, true>, 1, -1, false> >; Functor = Eigen::internal::add_assign_op; Weak = void]’ 954 | call_dense_assignment_loop(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:92:55: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 92 | if(forward) make_block_householder_triangular_factor(T, vectors, hCoeffs); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of ‘void Eigen::internal::gemm_pack_lhs::operator()(Scalar*, const DataMapper&, Index, Index, Index, Index) [with Scalar = double; Index = long int; DataMapper = Eigen::internal::const_blas_data_mapper; int Pack1 = 4; int Pack2 = 2; Packet = __vector(2) double; bool Conjugate = false; bool PanelMode = false]’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:184:17: required from ‘static void Eigen::internal::general_matrix_matrix_product::run(Index, Index, Index, const LhsScalar*, Index, const RhsScalar*, Index, ResScalar*, Index, Index, ResScalar, Eigen::internal::level3_blocking&, Eigen::internal::GemmParallelInfo*) [with Index = long int; LhsScalar = double; int LhsStorageOrder = 0; bool ConjugateLhs = false; RhsScalar = double; int RhsStorageOrder = 1; bool ConjugateRhs = false; int ResInnerStride = 1; ResScalar = double]’ 184 | pack_lhs(blockA, lhs.getSubMapper(i2,k2), actual_kc, actual_mc); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:230:14: required from ‘void Eigen::internal::gemm_functor::operator()(Index, Index, Index, Index, Eigen::internal::GemmParallelInfo*) const [with Scalar = double; Index = long int; Gemm = Eigen::internal::general_matrix_matrix_product; Lhs = Eigen::Matrix; Rhs = Eigen::Transpose >; Dest = Eigen::Matrix; BlockingType = Eigen::internal::gemm_blocking_space<0, double, double, -1, -1, -1, 1, false>]’ 230 | Gemm::run(rows, cols, m_lhs.cols(), | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ 231 | &m_lhs.coeffRef(row,0), m_lhs.outerStride(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 | &m_rhs.coeffRef(0,col), m_rhs.outerStride(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 | (Scalar*)&(m_dest.coeffRef(row,col)), m_dest.innerStride(), m_dest.outerStride(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 | m_actualAlpha, m_blocking, info); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/Parallelizer.h:114:7: required from ‘void Eigen::internal::parallelize_gemm(const Functor&, Index, Index, Index, bool) [with bool Condition = true; Functor = gemm_functor, Eigen::Matrix, Eigen::Transpose >, Eigen::Matrix, gemm_blocking_space<0, double, double, -1, -1, -1, 1, false> >; Index = long int]’ 114 | func(0,rows, 0,cols); | ~~~~^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:509:9: required from ‘static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix; Lhs = Eigen::Product, Eigen::DiagonalWrapper >, 1>; Rhs = Eigen::Transpose >; Scalar = double]’ 508 | internal::parallelize_gemm<(Dest::MaxRowsAtCompileTime>32 || Dest::MaxRowsAtCompileTime==Dynamic)> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 | (GemmFunctor(lhs, rhs, dst, actualAlpha, blocking), a_lhs.rows(), a_rhs.cols(), a_lhs.cols(), Dest::Flags&RowMajorBit); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:445:20: required from ‘static void Eigen::internal::generic_product_impl::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix; Lhs = Eigen::Product, Eigen::DiagonalWrapper >, 1>; Rhs = Eigen::Transpose >]’ 445 | scaleAndAddTo(dst, lhs, rhs, Scalar(1)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Product, Eigen::DiagonalWrapper >, 1>; Rhs = Eigen::Transpose >; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>]’ 148 | generic_product_impl::evalTo(dst, src.lhs(), src.rhs()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 797 | internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 594 | _set_noalias(other); | ~~~~~~~~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 423 | : Base(other.derived()) | ^ GetIndCEScoresCPPnewInd.cpp:23:44: required from here 23 | return(svdMat.matrixV()*Sinv.asDiagonal()*svdMat.matrixU().transpose()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2100:82: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 2100 | typedef typename unpacket_traits::half>::half QuarterPacket; | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2102:56: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 2102 | HalfPacketSize = unpacket_traits::size, | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2103:62: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 2103 | QuarterPacketSize = unpacket_traits::size, | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2103:62: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of ‘void Eigen::internal::gebp_kernel::operator()(const DataMapper&, const LhsScalar*, const RhsScalar*, Index, Index, Index, ResScalar, Index, Index, Index, Index) [with LhsScalar = double; RhsScalar = double; Index = long int; DataMapper = Eigen::internal::blas_data_mapper; int mr = 4; int nr = 4; bool ConjugateLhs = false; bool ConjugateRhs = false; ResScalar = double]’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:198:15: required from ‘static void Eigen::internal::general_matrix_matrix_product::run(Index, Index, Index, const LhsScalar*, Index, const RhsScalar*, Index, ResScalar*, Index, Index, ResScalar, Eigen::internal::level3_blocking&, Eigen::internal::GemmParallelInfo*) [with Index = long int; LhsScalar = double; int LhsStorageOrder = 0; bool ConjugateLhs = false; RhsScalar = double; int RhsStorageOrder = 1; bool ConjugateRhs = false; int ResInnerStride = 1; ResScalar = double]’ 198 | gebp(res.getSubMapper(i2, j2), blockA, blockB, actual_mc, actual_kc, actual_nc, alpha); | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:230:14: required from ‘void Eigen::internal::gemm_functor::operator()(Index, Index, Index, Index, Eigen::internal::GemmParallelInfo*) const [with Scalar = double; Index = long int; Gemm = Eigen::internal::general_matrix_matrix_product; Lhs = Eigen::Matrix; Rhs = Eigen::Transpose >; Dest = Eigen::Matrix; BlockingType = Eigen::internal::gemm_blocking_space<0, double, double, -1, -1, -1, 1, false>]’ 230 | Gemm::run(rows, cols, m_lhs.cols(), | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ 231 | &m_lhs.coeffRef(row,0), m_lhs.outerStride(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 | &m_rhs.coeffRef(0,col), m_rhs.outerStride(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 | (Scalar*)&(m_dest.coeffRef(row,col)), m_dest.innerStride(), m_dest.outerStride(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 | m_actualAlpha, m_blocking, info); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/Parallelizer.h:114:7: required from ‘void Eigen::internal::parallelize_gemm(const Functor&, Index, Index, Index, bool) [with bool Condition = true; Functor = gemm_functor, Eigen::Matrix, Eigen::Transpose >, Eigen::Matrix, gemm_blocking_space<0, double, double, -1, -1, -1, 1, false> >; Index = long int]’ 114 | func(0,rows, 0,cols); | ~~~~^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:509:9: required from ‘static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix; Lhs = Eigen::Product, Eigen::DiagonalWrapper >, 1>; Rhs = Eigen::Transpose >; Scalar = double]’ 508 | internal::parallelize_gemm<(Dest::MaxRowsAtCompileTime>32 || Dest::MaxRowsAtCompileTime==Dynamic)> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 | (GemmFunctor(lhs, rhs, dst, actualAlpha, blocking), a_lhs.rows(), a_rhs.cols(), a_lhs.cols(), Dest::Flags&RowMajorBit); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:445:20: required from ‘static void Eigen::internal::generic_product_impl::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix; Lhs = Eigen::Product, Eigen::DiagonalWrapper >, 1>; Rhs = Eigen::Transpose >]’ 445 | scaleAndAddTo(dst, lhs, rhs, Scalar(1)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Product, Eigen::DiagonalWrapper >, 1>; Rhs = Eigen::Transpose >; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>]’ 148 | generic_product_impl::evalTo(dst, src.lhs(), src.rhs()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 797 | internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 594 | _set_noalias(other); | ~~~~~~~~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 423 | : Base(other.derived()) | ^ GetIndCEScoresCPPnewInd.cpp:23:44: required from here 23 | return(svdMat.matrixV()*Sinv.asDiagonal()*svdMat.matrixU().transpose()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1920:103: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 1920 | const int SResPacketHalfSize = unpacket_traits::half>::size; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1921:138: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 1921 | const int SResPacketQuarterSize = unpacket_traits::half>::half>::size; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1921:138: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1977:135: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 1977 | typedef typename conditional=8,typename unpacket_traits::half,SResPacket>::type SResPacketHalf; | ^~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1978:135: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 1978 | typedef typename conditional=8,typename unpacket_traits::half,SLhsPacket>::type SLhsPacketHalf; | ^~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1979:135: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 1979 | typedef typename conditional=8,typename unpacket_traits::half,SRhsPacket>::type SRhsPacketHalf; | ^~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1980:135: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 1980 | typedef typename conditional=8,typename unpacket_traits::half,SAccPacket>::type SAccPacketHalf; | ^~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, -1, false>, 1, -1, false> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, -1, -1, false>, 1, -1, false> >, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, -1, false>, 1, -1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, -1, false>, 1, -1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl, -1, -1, false>, 1, -1, false>, Eigen::Dense>’ 118 | template class TransposeImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose, -1, -1, false>, 1, -1, false> >’ 52 | template class Transpose | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:50:23: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; Func = sub_assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/NoAlias.h:59:31: required from ‘ExpressionType& Eigen::NoAlias::operator-=(const StorageBase&) [with OtherDerived = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; ExpressionType = Eigen::Block, -1, 1, false>; StorageBase = Eigen::MatrixBase]’ 59 | call_assignment_no_alias(m_expression, other.derived(), internal::sub_assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:361:25: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 361 | A21.noalias() -= A20 * temp.head(k); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 526 | m_info = internal::ldlt_inplace::unblocked(m_matrix, m_transpositions, m_temporary, m_sign) ? Success : NumericalIssue; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:39:52: required from here 39 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Transpose, -1, -1, false>, 1, -1, false> >, const Eigen::Block, -1, 1, false>, -1, 1, true> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Transpose, -1, -1, false>, 1, -1, false> >, const Eigen::Block, -1, 1, false>, -1, 1, true> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Transpose, -1, -1, false>, 1, -1, false> >, const Eigen::Block, -1, 1, false>, -1, 1, true> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Transpose, -1, -1, false>, 1, -1, false> >, const Eigen::Block, -1, 1, false>, -1, 1, true>, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Transpose, -1, -1, false>, 1, -1, false> >, const Eigen::Block, -1, 1, false>, -1, 1, true> >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:50:56: required from ‘static Eigen::internal::dot_nocheck::ResScalar Eigen::internal::dot_nocheck::run(const Eigen::MatrixBase&, const Eigen::MatrixBase&) [with T = Eigen::Block, -1, -1, false>, 1, -1, false>; U = Eigen::Block, -1, 1, false>, -1, 1, true>; ResScalar = double]’ 50 | return a.transpose().template binaryExpr(b).sum(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:84:58: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; Func = sub_assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/NoAlias.h:59:31: required from ‘ExpressionType& Eigen::NoAlias::operator-=(const StorageBase&) [with OtherDerived = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; ExpressionType = Eigen::Block, -1, 1, false>; StorageBase = Eigen::MatrixBase]’ 59 | call_assignment_no_alias(m_expression, other.derived(), internal::sub_assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:361:25: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 361 | A21.noalias() -= A20 * temp.head(k); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 526 | m_info = internal::ldlt_inplace::unblocked(m_matrix, m_transpositions, m_temporary, m_sign) ? Success : NumericalIssue; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:39:52: required from here 39 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Matrix >, const Eigen::Block, 1>, Eigen::Transpose > >, -1, 1, false>, 0>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Matrix >, const Eigen::Block, 1>, Eigen::Transpose > >, -1, 1, false>, 0> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Matrix >, const Eigen::Block, 1>, Eigen::Transpose > >, -1, 1, false>, 0> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base, const Eigen::Matrix >, const Eigen::Block, 1>, Eigen::Transpose > >, -1, 1, false>, 0, 7>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl, const Eigen::Matrix >, const Eigen::Block, 1>, Eigen::Transpose > >, -1, 1, false>, 0, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, const Eigen::Matrix >, const Eigen::Block, 1>, Eigen::Transpose > >, -1, 1, false>, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:345:45: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:42:58: required from here 42 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 1>, Eigen::Transpose > >, -1, 1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 1>, Eigen::Transpose > >, -1, 1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1>, Eigen::Transpose > >, -1, 1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:172:103: required from ‘class Eigen::internal::BlockImpl_dense, 1>, Eigen::Transpose > >, -1, 1, false, false>’ 172 | template class BlockImpl_dense | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from ‘class Eigen::BlockImpl, 1>, Eigen::Transpose > >, -1, 1, false, Eigen::Dense>’ 154 | class BlockImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block, 1>, Eigen::Transpose > >, -1, 1, false>’ 103 | template class Block | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:114:15: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:42:58: required from here 42 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 1>, Eigen::Transpose > >, -1, 1, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, 1>, Eigen::Transpose > >, -1, 1, false> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:372:102: required from ‘struct Eigen::internal::plain_object_eval, 1>, Eigen::Transpose > >, -1, 1, false>, Eigen::Dense>’ 372 | typedef typename plain_matrix_type_dense::XprKind, evaluator::Flags>::type type; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:370:45: required from ‘struct Eigen::internal::generic_product_impl, const Eigen::Matrix >, const Eigen::Block, 1>, Eigen::Transpose > >, -1, 1, false>, Eigen::DenseShape, Eigen::DenseShape, 7>’ 370 | typedef typename nested_eval::type RhsNested; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:479:24: required from ‘static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix; Lhs = Eigen::CwiseUnaryOp, const Eigen::Matrix >; Rhs = Eigen::Solve, 1>, Eigen::Transpose > >; Scalar = double]’ 478 | return internal::generic_product_impl | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 | ::scaleAndAddTo(dst_vec, a_lhs, a_rhs.col(0), alpha); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:445:20: required from ‘static void Eigen::internal::generic_product_impl::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix; Lhs = Eigen::CwiseUnaryOp, const Eigen::Matrix >; Rhs = Eigen::Solve, 1>, Eigen::Transpose > >]’ 445 | scaleAndAddTo(dst, lhs, rhs, Scalar(1)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:42:58: required from here 42 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 1, -1, false>, Eigen::Solve, 1>, Eigen::Transpose > >, 0>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Matrix >, 1, -1, false>, Eigen::Solve, 1>, Eigen::Transpose > >, 0> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Matrix >, 1, -1, false>, Eigen::Solve, 1>, Eigen::Transpose > >, 0> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base, const Eigen::Matrix >, 1, -1, false>, Eigen::Solve, 1>, Eigen::Transpose > >, 0, 7>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl, const Eigen::Matrix >, 1, -1, false>, Eigen::Solve, 1>, Eigen::Transpose > >, 0, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, const Eigen::Matrix >, 1, -1, false>, Eigen::Solve, 1>, Eigen::Transpose > >, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:345:45: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:42:58: required from here 42 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 1, -1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Matrix >, 1, -1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Matrix >, 1, -1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:172:103: required from ‘class Eigen::internal::BlockImpl_dense, const Eigen::Matrix >, 1, -1, false, false>’ 172 | template class BlockImpl_dense | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from ‘class Eigen::BlockImpl, const Eigen::Matrix >, 1, -1, false, Eigen::Dense>’ 154 | class BlockImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block, const Eigen::Matrix >, 1, -1, false>’ 103 | template class Block | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:113:15: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:42:58: required from here 42 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, const Eigen::Matrix >, 1, -1, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, const Eigen::Matrix >, 1, -1, false> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:372:102: required from ‘struct Eigen::internal::plain_object_eval, const Eigen::Matrix >, 1, -1, false>, Eigen::Dense>’ 372 | typedef typename plain_matrix_type_dense::XprKind, evaluator::Flags>::type type; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:369:45: required from ‘struct Eigen::internal::generic_product_impl, const Eigen::Matrix >, 1, -1, false>, Eigen::Solve, 1>, Eigen::Transpose > >, Eigen::DenseShape, Eigen::DenseShape, 7>’ 369 | typedef typename nested_eval::type LhsNested; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:486:24: required from ‘static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix; Lhs = Eigen::CwiseUnaryOp, const Eigen::Matrix >; Rhs = Eigen::Solve, 1>, Eigen::Transpose > >; Scalar = double]’ 485 | return internal::generic_product_impl | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 486 | ::scaleAndAddTo(dst_vec, a_lhs.row(0), a_rhs, alpha); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:445:20: required from ‘static void Eigen::internal::generic_product_impl::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix; Lhs = Eigen::CwiseUnaryOp, const Eigen::Matrix >; Rhs = Eigen::Solve, 1>, Eigen::Transpose > >]’ 445 | scaleAndAddTo(dst, lhs, rhs, Scalar(1)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:42:58: required from here 42 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false> >; Eigen::Index = long int]’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:243:63: required from ‘static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Evaluator&, const Func&, const XprType&) [with XprType = Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false> >; Func = Eigen::internal::scalar_sum_op; Evaluator = Eigen::internal::redux_evaluator, const Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false> > >; Scalar = double]’ 243 | const Index alignedStart = internal::first_default_aligned(xpr); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false> >; typename Eigen::internal::traits::Scalar = double]’ 418 | return internal::redux_impl::run(thisEval, func, derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false> >; typename Eigen::internal::traits::Scalar = double]’ 463 | return derived().redux(Eigen::internal::scalar_sum_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:98:46: required from ‘typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::squaredNorm() const [with Derived = Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false>; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]’ 98 | return numext::real((*this).cwiseAbs2().sum()); | ~~~~~~~~~~~~~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/Householder.h:78:71: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/QR/ColPivHouseholderQR.h:540:52: required from ‘void Eigen::ColPivHouseholderQR::computeInPlace() [with _MatrixType = Eigen::Matrix]’ 540 | m_qr.col(k).tail(rows-k).makeHouseholderInPlace(m_hCoeffs.coeffRef(k), beta); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/QR/ColPivHouseholderQR.h:477:3: required from ‘Eigen::ColPivHouseholderQR<_MatrixType>& Eigen::ColPivHouseholderQR::compute(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix]’ 477 | computeInPlace(); | ^~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:229:19: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 229 | m_qr.compute(m_adjoint); | ~~~~~~~~~~~~^~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 654 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, false> >, 1, -1, true>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, false> >, 1, -1, true>, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, true>, -1, 1, false> >, 1, -1, true> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, 1, true>, -1, 1, false> >, 1, -1, true> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, 1, true>, -1, 1, false> >, 1, -1, true>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, -1, 1, true>, -1, 1, false> >, 1, -1, true, true>’ 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/QR/ColPivHouseholderQR.h:550:35: required from ‘void Eigen::ColPivHouseholderQR::computeInPlace() [with _MatrixType = Eigen::Matrix]’ 549 | m_qr.bottomRightCorner(rows-k, cols-k-1) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 550 | .applyHouseholderOnTheLeft(m_qr.col(k).tail(rows-k-1), m_hCoeffs.coeffRef(k), &m_temp.coeffRef(k+1)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/QR/ColPivHouseholderQR.h:477:3: required from ‘Eigen::ColPivHouseholderQR<_MatrixType>& Eigen::ColPivHouseholderQR::compute(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix]’ 477 | computeInPlace(); | ^~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:229:19: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 229 | m_qr.compute(m_adjoint); | ~~~~~~~~~~~~^~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> > >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> > >, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> > >, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> > > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl, 0, Eigen::Stride<0, 0> >, Eigen::Dense>’ 118 | template class TransposeImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/Householder.h:129:19: required from ‘void Eigen::MatrixBase::applyHouseholderOnTheLeft(const EssentialPart&, const Scalar&, Scalar*) [with EssentialPart = Eigen::Block, -1, 1, false>; Derived = Eigen::Block, -1, -1, false>; Scalar = double]’ 129 | tmp.noalias() = essential.adjoint() * bottom; | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:307:42: required from ‘void Eigen::HouseholderSequence::evalTo(Dest&, Workspace&) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 306 | dst.bottomRightCorner(cornerSize, cornerSize) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 | .applyHouseholderOnTheLeft(essentialVector(k), m_coeffs.coeff(k), workspace.data()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:232:56: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 232 | if(svd.m_computeFullV) m_qr.householderQ().evalTo(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, -1, false>, -1, -1, false> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, -1, -1, false>, -1, -1, false> >, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, -1, false>, -1, -1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, -1, false>, -1, -1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl, -1, -1, false>, -1, -1, false>, Eigen::Dense>’ 118 | template class TransposeImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose, -1, -1, false>, -1, -1, false> >’ 52 | template class Transpose | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:207:26: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/Householder.h:129:19: required from ‘void Eigen::MatrixBase::applyHouseholderOnTheLeft(const EssentialPart&, const Scalar&, Scalar*) [with EssentialPart = Eigen::Block, -1, 1, false>; Derived = Eigen::Block, -1, -1, false>; Scalar = double]’ 129 | tmp.noalias() = essential.adjoint() * bottom; | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:307:42: required from ‘void Eigen::HouseholderSequence::evalTo(Dest&, Workspace&) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 306 | dst.bottomRightCorner(cornerSize, cornerSize) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 | .applyHouseholderOnTheLeft(essentialVector(k), m_coeffs.coeff(k), workspace.data()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:232:56: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 232 | if(svd.m_computeFullV) m_qr.householderQ().evalTo(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, false> > >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, false> > >, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, false> > > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, 1, false> > > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl, -1, 1, false> >, Eigen::Dense>’ 118 | template class TransposeImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose, -1, 1, false> > >’ 52 | template class Transpose | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:207:43: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/Householder.h:129:19: required from ‘void Eigen::MatrixBase::applyHouseholderOnTheLeft(const EssentialPart&, const Scalar&, Scalar*) [with EssentialPart = Eigen::Block, -1, 1, false>; Derived = Eigen::Block, -1, -1, false>; Scalar = double]’ 129 | tmp.noalias() = essential.adjoint() * bottom; | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:307:42: required from ‘void Eigen::HouseholderSequence::evalTo(Dest&, Workspace&) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 306 | dst.bottomRightCorner(cornerSize, cornerSize) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 | .applyHouseholderOnTheLeft(essentialVector(k), m_coeffs.coeff(k), workspace.data()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:232:56: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 232 | if(svd.m_computeFullV) m_qr.householderQ().evalTo(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixMatrix.h:457:59: required from ‘static void Eigen::internal::triangular_product_impl::run(Dest&, const Lhs&, const Rhs&, const typename Dest::Scalar&) [with Dest = Eigen::Block, -1, -1, false>; int Mode = 5; bool LhsIsTriangular = true; Lhs = const Eigen::Block, -1, -1, false>; Rhs = Eigen::Matrix; typename Dest::Scalar = double]’ 457 | dst.topRows(diagSize) -= ((lhs_alpha-LhsScalar(1))*a_rhs).topRows(diagSize); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:770:14: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:103:17: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 103 | mat.noalias() -= V * tmp; | ~~~~~~~~~~~~~~^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >, -1, -1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >, -1, -1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >, -1, -1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:172:103: required from ‘class Eigen::internal::BlockImpl_dense, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >, -1, -1, false, false>’ 172 | template class BlockImpl_dense | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from ‘class Eigen::BlockImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >, -1, -1, false, Eigen::Dense>’ 154 | class BlockImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >, -1, -1, false>’ 103 | template class Block | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixMatrix.h:457:74: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:103:17: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 103 | mat.noalias() -= V * tmp; | ~~~~~~~~~~~~~~^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, -1, false>, -1, -1, true>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, -1, -1, false>, -1, -1, true>, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, -1, -1, false>, -1, -1, true>, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, -1, false>, -1, -1, true> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, -1, false>, -1, -1, true> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, -1, false>, -1, -1, true>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:103:17: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 103 | mat.noalias() -= V * tmp; | ~~~~~~~~~~~~~~^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, -1, false>, -1, -1, true>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, -1, -1, false>, -1, -1, true>, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, -1, false>, -1, -1, true> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, -1, false>, -1, -1, true> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, -1, false>, -1, -1, true>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, -1, -1, false>, -1, -1, true, true>’ 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:103:17: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 103 | mat.noalias() -= V * tmp; | ~~~~~~~~~~~~~~^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, false>, -1, -1, true> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, false>, -1, -1, true> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, false>, -1, -1, true> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, false>, -1, -1, true>, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, false>, -1, -1, true> >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixMatrix.h:462:59: required from ‘static void Eigen::internal::triangular_product_impl::run(Dest&, const Lhs&, const Rhs&, const typename Dest::Scalar&) [with Dest = Eigen::Block, -1, -1, false>; int Mode = 5; bool LhsIsTriangular = true; Lhs = const Eigen::Block, -1, -1, false>; Rhs = Eigen::Matrix; typename Dest::Scalar = double]’ 462 | dst.leftCols(diagSize) -= (rhs_alpha-RhsScalar(1))*a_lhs.leftCols(diagSize); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:770:14: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:103:17: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 103 | mat.noalias() -= V * tmp; | ~~~~~~~~~~~~~~^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator >, -1, 1, false>, -1, 1, true> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator >, -1, 1, false>, -1, 1, true> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:78: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::Transpose, Eigen::DiagonalWrapper >, 1>, 1, -1, false> >, const Eigen::Block >, -1, 1, false>, -1, 1, true> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ 739 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8: required from ‘struct Eigen::internal::evaluator, const Eigen::Transpose, Eigen::DiagonalWrapper >, 1>, 1, -1, false> >, const Eigen::Block >, -1, 1, false>, -1, 1, true> > >’ 722 | struct evaluator > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:357:7: required from ‘class Eigen::internal::redux_evaluator, const Eigen::Transpose, Eigen::DiagonalWrapper >, 1>, 1, -1, false> >, const Eigen::Block >, -1, 1, false>, -1, 1, true> > >’ 357 | class redux_evaluator : public internal::evaluator<_XprType> | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:414:17: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseBinaryOp, const Eigen::Transpose, Eigen::DiagonalWrapper >, 1>, 1, -1, false> >, const Eigen::Block >, -1, 1, false>, -1, 1, true> >; typename Eigen::internal::traits::Scalar = double]’ 414 | ThisEvaluator thisEval(derived()); | ^~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Product, Eigen::DiagonalWrapper >, 1>; Rhs = Eigen::Transpose >; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>]’ 148 | generic_product_impl::evalTo(dst, src.lhs(), src.rhs()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 797 | internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 594 | _set_noalias(other); | ~~~~~~~~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 423 | : Base(other.derived()) | ^ GetIndCEScoresCPPnewInd.cpp:23:44: required from here 23 | return(svdMat.matrixV()*Sinv.asDiagonal()*svdMat.matrixU().transpose()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, Eigen::DiagonalWrapper >, 1>, 1, -1, false>, 1, -1, true> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, Eigen::DiagonalWrapper >, 1>, 1, -1, false>, 1, -1, true> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:311:41: required from ‘struct Eigen::internal::unary_evaluator, Eigen::DiagonalWrapper >, 1>, 1, -1, false>, 1, -1, true> >, Eigen::internal::IndexBased, double>’ 311 | CoeffReadCost = evaluator::CoeffReadCost, | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator, Eigen::DiagonalWrapper >, 1>, 1, -1, false>, 1, -1, true> > >’ 90 | struct evaluator : public unary_evaluator | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, Eigen::DiagonalWrapper >, 1>, 1, -1, false>, 1, -1, true> > >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:41: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::Transpose, Eigen::DiagonalWrapper >, 1>, 1, -1, false>, 1, -1, true> >, const Eigen::Block >, -1, 1, false> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ 739 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Product, Eigen::DiagonalWrapper >, 1>; Rhs = Eigen::Transpose >; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>]’ 148 | generic_product_impl::evalTo(dst, src.lhs(), src.rhs()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 797 | internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 594 | _set_noalias(other); | ~~~~~~~~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 423 | : Base(other.derived()) | ^ GetIndCEScoresCPPnewInd.cpp:23:44: required from here 23 | return(svdMat.matrixV()*Sinv.asDiagonal()*svdMat.matrixU().transpose()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 1, -1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, 1, -1, false>, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 1, -1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1, -1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 1, -1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, 1, -1, false, true>’ 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:41:51: required from here 41 | xiEst = LamPhi * ldlt_SigmaYi.solve(yVec - muVec) ;// LamPhiSig * (yVec - muVec); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, -1, 1, true>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, -1, 1, true> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, -1, 1, true> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:172:103: required from ‘class Eigen::internal::BlockImpl_dense, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, -1, 1, true, false>’ 172 | template class BlockImpl_dense | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from ‘class Eigen::BlockImpl, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, -1, 1, true, Eigen::Dense>’ 154 | class BlockImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, -1, 1, true>’ 103 | template class Block | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:380:70: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:41:51: required from here 41 | xiEst = LamPhi * ldlt_SigmaYi.solve(yVec - muVec) ;// LamPhiSig * (yVec - muVec); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::Solve, 1>, Eigen::Transpose > >, 1>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::Solve, 1>, Eigen::Transpose > >, 1> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, Eigen::Solve, 1>, Eigen::Transpose > >, 1> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base, Eigen::Solve, 1>, Eigen::Transpose > >, 1, 8>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl, Eigen::Solve, 1>, Eigen::Transpose > >, 1, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, Eigen::Solve, 1>, Eigen::Transpose > >, 1>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:469:72: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:42:58: required from here 42 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Product, Eigen::Solve, 1>, Eigen::Transpose > >, 1> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Product, Eigen::Solve, 1>, Eigen::Transpose > >, 1> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Product, Eigen::Solve, 1>, Eigen::Transpose > >, 1> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Product, Eigen::Solve, 1>, Eigen::Transpose > >, 1>, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Product, Eigen::Solve, 1>, Eigen::Transpose > >, 1> >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:469:55: required from ‘static void Eigen::internal::generic_product_impl::eval_dynamic_impl(Dst&, const LhsT&, const RhsT&, const Func&, const Scalar&, Eigen::internal::true_type) [with Dst = Eigen::Matrix; LhsT = Eigen::Matrix; RhsT = Eigen::Solve, 1>, Eigen::Transpose > >; Func = Eigen::internal::assign_op; Scalar = double; Lhs = Eigen::CwiseUnaryOp, const Eigen::Matrix >; Rhs = Eigen::Solve, 1>, Eigen::Transpose > >]’ 469 | call_restricted_packet_assignment_no_alias(dst, s * lhs.lazyProduct(rhs), func); | ~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:446:22: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:42:58: required from here 42 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 1>, Eigen::Transpose > >, -1, 1, false>, -1, 1, true>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 1>, Eigen::Transpose > >, -1, 1, false>, -1, 1, true> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1>, Eigen::Transpose > >, -1, 1, false>, -1, 1, true> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:172:103: required from ‘class Eigen::internal::BlockImpl_dense, 1>, Eigen::Transpose > >, -1, 1, false>, -1, 1, true, false>’ 172 | template class BlockImpl_dense | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from ‘class Eigen::BlockImpl, 1>, Eigen::Transpose > >, -1, 1, false>, -1, 1, true, Eigen::Dense>’ 154 | class BlockImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block, 1>, Eigen::Transpose > >, -1, 1, false>, -1, 1, true>’ 103 | template class Block | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:380:70: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:42:58: required from here 42 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 1, -1, false>, 1, -1, true>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Matrix >, 1, -1, false>, 1, -1, true> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Matrix >, 1, -1, false>, 1, -1, true> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:172:103: required from ‘class Eigen::internal::BlockImpl_dense, const Eigen::Matrix >, 1, -1, false>, 1, -1, true, false>’ 172 | template class BlockImpl_dense | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from ‘class Eigen::BlockImpl, const Eigen::Matrix >, 1, -1, false>, 1, -1, true, Eigen::Dense>’ 154 | class BlockImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block, const Eigen::Matrix >, 1, -1, false>, 1, -1, true>’ 103 | template class Block | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:380:43: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:42:58: required from here 42 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, 1, true>, -1, 1, false>, -1, 1, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:780:20: required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false>; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Functor = assign_op]’ 780 | DstEvaluatorType dstEvaluator(dst); | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31: required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false>; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Functor = Eigen::internal::assign_op; Weak = void]’ 954 | call_dense_assignment_loop(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false>; Src = Eigen::CwiseBinaryOp, const Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:858:27: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false>; Src = Eigen::CwiseBinaryOp, const Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Func = assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 858 | call_assignment_no_alias(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false>; Src = Eigen::CwiseBinaryOp, const Eigen::Block, -1, 1, true>, -1, 1, false>, -1, 1, false>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Assign.h:66:28: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/QR/ColPivHouseholderQR.h:540:52: required from ‘void Eigen::ColPivHouseholderQR::computeInPlace() [with _MatrixType = Eigen::Matrix]’ 540 | m_qr.col(k).tail(rows-k).makeHouseholderInPlace(m_hCoeffs.coeffRef(k), beta); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/QR/ColPivHouseholderQR.h:477:3: required from ‘Eigen::ColPivHouseholderQR<_MatrixType>& Eigen::ColPivHouseholderQR::compute(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix]’ 477 | computeInPlace(); | ^~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:229:19: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 229 | m_qr.compute(m_adjoint); | ~~~~~~~~~~~~^~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, false> > >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, false> > >, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, true>, -1, 1, false> > > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, 1, true>, -1, 1, false> > > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl, -1, 1, true>, -1, 1, false> >, Eigen::Dense>’ 118 | template class TransposeImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose, -1, 1, true>, -1, 1, false> > >’ 52 | template class Transpose | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:207:43: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/QR/ColPivHouseholderQR.h:550:35: required from ‘void Eigen::ColPivHouseholderQR::computeInPlace() [with _MatrixType = Eigen::Matrix]’ 549 | m_qr.bottomRightCorner(rows-k, cols-k-1) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 550 | .applyHouseholderOnTheLeft(m_qr.col(k).tail(rows-k-1), m_hCoeffs.coeffRef(k), &m_temp.coeffRef(k+1)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/QR/ColPivHouseholderQR.h:477:3: required from ‘Eigen::ColPivHouseholderQR<_MatrixType>& Eigen::ColPivHouseholderQR::compute(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix]’ 477 | computeInPlace(); | ^~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:229:19: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 229 | m_qr.compute(m_adjoint); | ~~~~~~~~~~~~^~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, -1, false>, -1, -1, false>, 1, -1, false> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, -1, -1, false>, -1, -1, false>, 1, -1, false> >, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, -1, false>, -1, -1, false>, 1, -1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, -1, false>, -1, -1, false>, 1, -1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl, -1, -1, false>, -1, -1, false>, 1, -1, false>, Eigen::Dense>’ 118 | template class TransposeImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose, -1, -1, false>, -1, -1, false>, 1, -1, false> >’ 52 | template class Transpose | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:50:23: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/Householder.h:167:19: required from ‘void Eigen::MatrixBase::applyHouseholderOnTheRight(const EssentialPart&, const Scalar&, Scalar*) [with EssentialPart = Eigen::Block, -1, 1, false>; Derived = Eigen::Block, -1, -1, false>; Scalar = double]’ 167 | tmp.noalias() = right * essential; | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:304:43: required from ‘void Eigen::HouseholderSequence::evalTo(Dest&, Workspace&) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 303 | dst.bottomRightCorner(cornerSize, cornerSize) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 | .applyHouseholderOnTheRight(essentialVector(k), m_coeffs.coeff(k), workspace.data()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:232:56: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 232 | if(svd.m_computeFullV) m_qr.householderQ().evalTo(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Transpose, -1, -1, false>, -1, -1, false>, 1, -1, false> >, const Eigen::Block, -1, 1, false>, -1, 1, true> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Transpose, -1, -1, false>, -1, -1, false>, 1, -1, false> >, const Eigen::Block, -1, 1, false>, -1, 1, true> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Transpose, -1, -1, false>, -1, -1, false>, 1, -1, false> >, const Eigen::Block, -1, 1, false>, -1, 1, true> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Transpose, -1, -1, false>, -1, -1, false>, 1, -1, false> >, const Eigen::Block, -1, 1, false>, -1, 1, true>, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Transpose, -1, -1, false>, -1, -1, false>, 1, -1, false> >, const Eigen::Block, -1, 1, false>, -1, 1, true> >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:50:56: required from ‘static Eigen::internal::dot_nocheck::ResScalar Eigen::internal::dot_nocheck::run(const Eigen::MatrixBase&, const Eigen::MatrixBase&) [with T = Eigen::Block, -1, -1, false>, -1, -1, false>, 1, -1, false>; U = Eigen::Block, -1, 1, false>, -1, 1, true>; ResScalar = double]’ 50 | return a.transpose().template binaryExpr(b).sum(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:84:58: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/Householder.h:167:19: required from ‘void Eigen::MatrixBase::applyHouseholderOnTheRight(const EssentialPart&, const Scalar&, Scalar*) [with EssentialPart = Eigen::Block, -1, 1, false>; Derived = Eigen::Block, -1, -1, false>; Scalar = double]’ 167 | tmp.noalias() = right * essential; | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:304:43: required from ‘void Eigen::HouseholderSequence::evalTo(Dest&, Workspace&) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 303 | dst.bottomRightCorner(cornerSize, cornerSize) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 | .applyHouseholderOnTheRight(essentialVector(k), m_coeffs.coeff(k), workspace.data()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:232:56: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 232 | if(svd.m_computeFullV) m_qr.householderQ().evalTo(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, false> >, 1, -1, true> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, false> >, 1, -1, true> >, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, false> >, 1, -1, true> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, 1, false> >, 1, -1, true> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl, -1, 1, false> >, 1, -1, true>, Eigen::Dense>’ 118 | template class TransposeImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose, -1, 1, false> >, 1, -1, true> >’ 52 | template class Transpose | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:50:23: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/Householder.h:129:19: required from ‘void Eigen::MatrixBase::applyHouseholderOnTheLeft(const EssentialPart&, const Scalar&, Scalar*) [with EssentialPart = Eigen::Block, -1, 1, false>; Derived = Eigen::Block, -1, -1, false>; Scalar = double]’ 129 | tmp.noalias() = essential.adjoint() * bottom; | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:307:42: required from ‘void Eigen::HouseholderSequence::evalTo(Dest&, Workspace&) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 306 | dst.bottomRightCorner(cornerSize, cornerSize) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 | .applyHouseholderOnTheLeft(essentialVector(k), m_coeffs.coeff(k), workspace.data()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:232:56: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 232 | if(svd.m_computeFullV) m_qr.householderQ().evalTo(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Transpose, -1, 1, false> >, 1, -1, true> >, const Eigen::Block, -1, -1, false>, -1, -1, false>, -1, 1, true> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Transpose, -1, 1, false> >, 1, -1, true> >, const Eigen::Block, -1, -1, false>, -1, -1, false>, -1, 1, true> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Transpose, -1, 1, false> >, 1, -1, true> >, const Eigen::Block, -1, -1, false>, -1, -1, false>, -1, 1, true> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Transpose, -1, 1, false> >, 1, -1, true> >, const Eigen::Block, -1, -1, false>, -1, -1, false>, -1, 1, true>, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Transpose, -1, 1, false> >, 1, -1, true> >, const Eigen::Block, -1, -1, false>, -1, -1, false>, -1, 1, true> >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:50:56: required from ‘static Eigen::internal::dot_nocheck::ResScalar Eigen::internal::dot_nocheck::run(const Eigen::MatrixBase&, const Eigen::MatrixBase&) [with T = Eigen::Block, -1, 1, false> >, 1, -1, true>; U = Eigen::Block, -1, -1, false>, -1, -1, false>, -1, 1, true>; ResScalar = double]’ 50 | return a.transpose().template binaryExpr(b).sum(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:84:58: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/Householder.h:129:19: required from ‘void Eigen::MatrixBase::applyHouseholderOnTheLeft(const EssentialPart&, const Scalar&, Scalar*) [with EssentialPart = Eigen::Block, -1, 1, false>; Derived = Eigen::Block, -1, -1, false>; Scalar = double]’ 129 | tmp.noalias() = essential.adjoint() * bottom; | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:307:42: required from ‘void Eigen::HouseholderSequence::evalTo(Dest&, Workspace&) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 306 | dst.bottomRightCorner(cornerSize, cornerSize) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 | .applyHouseholderOnTheLeft(essentialVector(k), m_coeffs.coeff(k), workspace.data()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:232:56: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 232 | if(svd.m_computeFullV) m_qr.householderQ().evalTo(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> > >, -1, 1, true>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> > >, -1, 1, true>, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> > >, -1, 1, true>, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > >, -1, 1, true> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> > >, -1, 1, true> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::Stride<0, 0> > >, -1, 1, true>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/Householder.h:129:19: required from ‘void Eigen::MatrixBase::applyHouseholderOnTheLeft(const EssentialPart&, const Scalar&, Scalar*) [with EssentialPart = Eigen::Block, -1, 1, false>; Derived = Eigen::Block, -1, -1, false>; Scalar = double]’ 129 | tmp.noalias() = essential.adjoint() * bottom; | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:307:42: required from ‘void Eigen::HouseholderSequence::evalTo(Dest&, Workspace&) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 306 | dst.bottomRightCorner(cornerSize, cornerSize) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 | .applyHouseholderOnTheLeft(essentialVector(k), m_coeffs.coeff(k), workspace.data()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:232:56: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 232 | if(svd.m_computeFullV) m_qr.householderQ().evalTo(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 1, -1, true>, 1, -1, false> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1, -1, true>, 1, -1, false> >, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 1, -1, true>, 1, -1, false> >, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 1, -1, true>, 1, -1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1, -1, true>, 1, -1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl, 1, -1, true>, 1, -1, false>, Eigen::Dense>’ 118 | template class TransposeImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:92:55: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 92 | if(forward) make_block_householder_triangular_factor(T, vectors, hCoeffs); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, -1, false>, -1, -1, false> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, -1, -1, false>, -1, -1, false> >, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, -1, false>, -1, -1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, -1, false>, -1, -1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl, -1, -1, false>, -1, -1, false>, Eigen::Dense>’ 118 | template class TransposeImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose, -1, -1, false>, -1, -1, false> >’ 52 | template class Transpose | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixVector.h:194:32: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:92:55: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 92 | if(forward) make_block_householder_triangular_factor(T, vectors, hCoeffs); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose, -1, -1, false>, -1, 1, true>, -1, 1, false> > > >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose, -1, -1, false>, -1, 1, true>, -1, 1, false> > > > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose, -1, -1, false>, -1, 1, true>, -1, 1, false> > > > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose, -1, -1, false>, -1, 1, true>, -1, 1, false> > >, Eigen::Dense>’ 118 | template class TransposeImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose, -1, -1, false>, -1, 1, true>, -1, 1, false> > > >’ 52 | template class Transpose | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixVector.h:194:48: required from ‘static void Eigen::internal::triangular_product_impl::run(Dest&, const Lhs&, const Rhs&, const typename Dest::Scalar&) [with Dest = Eigen::Block, 1, -1, true>, 1, -1, false>; int Mode = 5; Lhs = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose, -1, -1, false>, -1, 1, true>, -1, 1, false> > >; Rhs = const Eigen::Block, -1, -1, false>, -1, -1, false>; typename Dest::Scalar = double]’ 194 | ::run(rhs.transpose(),lhs.transpose(), dstT, alpha); | ~~~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:783:113: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:92:55: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 92 | if(forward) make_block_householder_triangular_factor(T, vectors, hCoeffs); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixMatrix.h:150:68: required from ‘static void Eigen::internal::product_triangular_matrix_matrix::run(Index, Index, Index, const Scalar*, Index, const Scalar*, Index, Scalar*, Index, Index, const Scalar&, Eigen::internal::level3_blocking&) [with Scalar = double; Index = long int; int Mode = 5; int LhsStorageOrder = 0; bool ConjugateLhs = false; int RhsStorageOrder = 0; bool ConjugateRhs = false; int ResInnerStride = 1; int Version = 0]’ 150 | Matrix triangularBuffer(a); | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixMatrix.h:443:12: required from ‘static void Eigen::internal::triangular_product_impl::run(Dest&, const Lhs&, const Rhs&, const typename Dest::Scalar&) [with Dest = Eigen::Block, -1, -1, false>; int Mode = 5; bool LhsIsTriangular = true; Lhs = const Eigen::Block, -1, -1, false>; Rhs = Eigen::Matrix; typename Dest::Scalar = double]’ 438 | internal::product_triangular_matrix_matrix::Flags&RowMajorBit) ? RowMajor : ColMajor, LhsBlasTraits::NeedToConjugate, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 | (internal::traits::Flags&RowMajorBit) ? RowMajor : ColMajor, RhsBlasTraits::NeedToConjugate, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 | (internal::traits::Flags&RowMajorBit) ? RowMajor : ColMajor, Dest::InnerStrideAtCompileTime> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 | ::run( | ~~~~~^ 444 | stripedRows, stripedCols, stripedDepth, // sizes | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 | &lhs.coeffRef(0,0), lhs.outerStride(), // lhs info | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 | &rhs.coeffRef(0,0), rhs.outerStride(), // rhs info | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 | &dst.coeffRef(0,0), dst.innerStride(), dst.outerStride(), // result info | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 | actualAlpha, blocking | ~~~~~~~~~~~~~~~~~~~~~ 449 | ); | ~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:770:14: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:103:17: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 103 | mat.noalias() -= V * tmp; | ~~~~~~~~~~~~~~^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:103:17: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 103 | mat.noalias() -= V * tmp; | ~~~~~~~~~~~~~~^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 0>, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 0>, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Diagonal.h:63:53: required from ‘class Eigen::Diagonal, 0>’ 63 | template class Diagonal | ^~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixMatrix.h:153:32: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:103:17: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 103 | mat.noalias() -= V * tmp; | ~~~~~~~~~~~~~~^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:179:81: required from ‘class Eigen::DenseBase, 0> >’ 179 | typedef typename internal::find_best_packet::type PacketScalar; | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Diagonal.h:63:53: required from ‘class Eigen::Diagonal, 0>’ 63 | template class Diagonal | ^~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixMatrix.h:153:32: required from ‘static void Eigen::internal::product_triangular_matrix_matrix::run(Index, Index, Index, const Scalar*, Index, const Scalar*, Index, Scalar*, Index, Index, const Scalar&, Eigen::internal::level3_blocking&) [with Scalar = double; Index = long int; int Mode = 5; int LhsStorageOrder = 0; bool ConjugateLhs = false; int RhsStorageOrder = 0; bool ConjugateRhs = false; int ResInnerStride = 1; int Version = 0]’ 153 | triangularBuffer.diagonal().setZero(); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixMatrix.h:443:12: required from ‘static void Eigen::internal::triangular_product_impl::run(Dest&, const Lhs&, const Rhs&, const typename Dest::Scalar&) [with Dest = Eigen::Block, -1, -1, false>; int Mode = 5; bool LhsIsTriangular = true; Lhs = const Eigen::Block, -1, -1, false>; Rhs = Eigen::Matrix; typename Dest::Scalar = double]’ 438 | internal::product_triangular_matrix_matrix::Flags&RowMajorBit) ? RowMajor : ColMajor, LhsBlasTraits::NeedToConjugate, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 | (internal::traits::Flags&RowMajorBit) ? RowMajor : ColMajor, RhsBlasTraits::NeedToConjugate, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 | (internal::traits::Flags&RowMajorBit) ? RowMajor : ColMajor, Dest::InnerStrideAtCompileTime> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 | ::run( | ~~~~~^ 444 | stripedRows, stripedCols, stripedDepth, // sizes | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 | &lhs.coeffRef(0,0), lhs.outerStride(), // lhs info | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 | &rhs.coeffRef(0,0), rhs.outerStride(), // rhs info | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 | &dst.coeffRef(0,0), dst.innerStride(), dst.outerStride(), // result info | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 | actualAlpha, blocking | ~~~~~~~~~~~~~~~~~~~~~ 449 | ); | ~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:770:14: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:103:17: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 103 | mat.noalias() -= V * tmp; | ~~~~~~~~~~~~~~^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 1, -1, false> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, 1, -1, false> >, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 1, -1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1, -1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl, 1, -1, false>, Eigen::Dense>’ 118 | template class TransposeImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose, 1, -1, false> >’ 52 | template class Transpose | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:606:37: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Product, Eigen::DiagonalWrapper >, 1>; Rhs = Eigen::Transpose >; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>]’ 148 | generic_product_impl::evalTo(dst, src.lhs(), src.rhs()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 797 | internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 594 | _set_noalias(other); | ~~~~~~~~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 423 | : Base(other.derived()) | ^ GetIndCEScoresCPPnewInd.cpp:23:44: required from here 23 | return(svdMat.matrixV()*Sinv.asDiagonal()*svdMat.matrixU().transpose()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block >, -1, 1, false> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block >, -1, 1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block >, -1, 1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block >, -1, 1, false>, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block >, -1, 1, false> >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:606:52: required from ‘const Eigen::internal::product_evaluator, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::CoeffReturnType Eigen::internal::product_evaluator, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::coeff(Eigen::Index, Eigen::Index) const [with Lhs = Eigen::Product, Eigen::DiagonalWrapper >, 1>; Rhs = Eigen::Transpose >; int ProductTag = 8; typename Eigen::internal::traits::Lhs>::Scalar = double; typename Eigen::Product::Lhs = Eigen::Product, Eigen::DiagonalWrapper >, 1>; typename Eigen::internal::traits::Rhs>::Scalar = double; typename Eigen::Product::Rhs = Eigen::Transpose >; CoeffReturnType = double; Eigen::Index = long int]’ 606 | return (m_lhs.row(row).transpose().cwiseProduct( m_rhs.col(col) )).sum(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:654:63: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Product, Eigen::DiagonalWrapper >, 1>; Rhs = Eigen::Transpose >; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>]’ 148 | generic_product_impl::evalTo(dst, src.lhs(), src.rhs()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 797 | internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 594 | _set_noalias(other); | ~~~~~~~~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 423 | : Base(other.derived()) | ^ GetIndCEScoresCPPnewInd.cpp:23:44: required from here 23 | return(svdMat.matrixV()*Sinv.asDiagonal()*svdMat.matrixU().transpose()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, -1, false>, 1, -1, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, -1, -1, false>, 1, -1, false> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:311:41: required from ‘struct Eigen::internal::unary_evaluator, -1, -1, false>, 1, -1, false> >, Eigen::internal::IndexBased, double>’ 311 | CoeffReadCost = evaluator::CoeffReadCost, | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator, -1, -1, false>, 1, -1, false> > >’ 90 | struct evaluator : public unary_evaluator | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, -1, -1, false>, 1, -1, false> > >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:41: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::Transpose, -1, -1, false>, 1, -1, false> >, const Eigen::Block, -1, 1, false>, -1, 1, true> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ 739 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; Func = sub_assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/NoAlias.h:59:31: required from ‘ExpressionType& Eigen::NoAlias::operator-=(const StorageBase&) [with OtherDerived = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; ExpressionType = Eigen::Block, -1, 1, false>; StorageBase = Eigen::MatrixBase]’ 59 | call_assignment_no_alias(m_expression, other.derived(), internal::sub_assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:361:25: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 361 | A21.noalias() -= A20 * temp.head(k); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 526 | m_info = internal::ldlt_inplace::unblocked(m_matrix, m_transpositions, m_temporary, m_sign) ? Success : NumericalIssue; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:39:52: required from here 39 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, 1, false>, -1, 1, true> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, -1, 1, false>, -1, 1, true> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:78: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::Transpose, -1, -1, false>, 1, -1, false> >, const Eigen::Block, -1, 1, false>, -1, 1, true> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ 739 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8: required from ‘struct Eigen::internal::evaluator, const Eigen::Transpose, -1, -1, false>, 1, -1, false> >, const Eigen::Block, -1, 1, false>, -1, 1, true> > >’ 722 | struct evaluator > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:357:7: required from ‘class Eigen::internal::redux_evaluator, const Eigen::Transpose, -1, -1, false>, 1, -1, false> >, const Eigen::Block, -1, 1, false>, -1, 1, true> > >’ 357 | class redux_evaluator : public internal::evaluator<_XprType> | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:414:17: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseBinaryOp, const Eigen::Transpose, -1, -1, false>, 1, -1, false> >, const Eigen::Block, -1, 1, false>, -1, 1, true> >; typename Eigen::internal::traits::Scalar = double]’ 414 | ThisEvaluator thisEval(derived()); | ^~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; Func = sub_assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/NoAlias.h:59:31: required from ‘ExpressionType& Eigen::NoAlias::operator-=(const StorageBase&) [with OtherDerived = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; ExpressionType = Eigen::Block, -1, 1, false>; StorageBase = Eigen::MatrixBase]’ 59 | call_assignment_no_alias(m_expression, other.derived(), internal::sub_assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:361:25: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 361 | A21.noalias() -= A20 * temp.head(k); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: required from ‘Eigen::LDLT<_MatrixType, _UpLo>& Eigen::LDLT::compute(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 526 | m_info = internal::ldlt_inplace::unblocked(m_matrix, m_transpositions, m_temporary, m_sign) ? Success : NumericalIssue; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:120:14: required from ‘Eigen::LDLT::LDLT(const Eigen::EigenBase&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 120 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:39:52: required from here 39 | Eigen::LDLT ldlt_SigmaYi(SigmaYi); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 1, -1, false> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Matrix >, 1, -1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Matrix >, 1, -1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl, const Eigen::Matrix >, 1, -1, false>, Eigen::Dense>’ 118 | template class TransposeImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose, const Eigen::Matrix >, 1, -1, false> >’ 52 | template class Transpose | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:207:43: required from ‘static void Eigen::internal::gemv_dense_selector<1, StorageOrder, BlasCompatible>::run(const Lhs&, const Rhs&, Dest&, const typename Dest::Scalar&) [with Lhs = Eigen::Block, const Eigen::Matrix >, 1, -1, false>; Rhs = Eigen::Matrix; Dest = Eigen::Block, 1, -1, false>; int StorageOrder = 1; bool BlasCompatible = true; typename Dest::Scalar = double]’ 207 | ::run(rhs.transpose(), lhs.transpose(), destT, alpha); | ~~~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:388:34: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:42:58: required from here 42 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, true>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, true>, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, true>, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, true> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, 1, true> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, 1, true>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:44:30: required from here 44 | fittedY = newMu + newPhi * xiEst; | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, const Eigen::Block, -1, 1, true>, 0>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::Stride<0, 0> >, const Eigen::Block, -1, 1, true>, 0> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> >, const Eigen::Block, -1, 1, true>, 0> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base, 0, Eigen::Stride<0, 0> >, const Eigen::Block, -1, 1, true>, 0, 7>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl, 0, Eigen::Stride<0, 0> >, const Eigen::Block, -1, 1, true>, 0, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, 0, Eigen::Stride<0, 0> >, const Eigen::Block, -1, 1, true>, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:345:45: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:44:30: required from here 44 | fittedY = newMu + newPhi * xiEst; | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, true>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, true>, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, true> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, 1, true> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, 1, true>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, -1, 1, true, true>’ 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:44:30: required from here 44 | fittedY = newMu + newPhi * xiEst; | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, 1, true> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, -1, 1, true> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:372:102: required from ‘struct Eigen::internal::plain_object_eval, -1, 1, true>, Eigen::Dense>’ 372 | typedef typename plain_matrix_type_dense::XprKind, evaluator::Flags>::type type; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:370:45: required from ‘struct Eigen::internal::generic_product_impl, 0, Eigen::Stride<0, 0> >, const Eigen::Block, -1, 1, true>, Eigen::DenseShape, Eigen::DenseShape, 7>’ 370 | typedef typename nested_eval::type RhsNested; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:479:24: required from ‘static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix; Lhs = Eigen::Map, 0, Eigen::Stride<0, 0> >; Rhs = Eigen::Matrix; Scalar = double]’ 478 | return internal::generic_product_impl | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 | ::scaleAndAddTo(dst_vec, a_lhs, a_rhs.col(0), alpha); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:455:20: required from ‘static void Eigen::internal::generic_product_impl::addTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix; Lhs = Eigen::Map, 0, Eigen::Stride<0, 0> >; Rhs = Eigen::Matrix]’ 455 | scaleAndAddTo(dst,lhs, rhs, Scalar(1)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:163:42: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:44:30: required from here 44 | fittedY = newMu + newPhi * xiEst; | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 1, 1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1, 1, false>, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 1, 1, false>, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 1, 1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1, 1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 1, 1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:44:30: required from here 44 | fittedY = newMu + newPhi * xiEst; | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 1, -1, false>, Eigen::Matrix, 0>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::Stride<0, 0> >, 1, -1, false>, Eigen::Matrix, 0> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> >, 1, -1, false>, Eigen::Matrix, 0> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base, 0, Eigen::Stride<0, 0> >, 1, -1, false>, Eigen::Matrix, 0, 7>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl, 0, Eigen::Stride<0, 0> >, 1, -1, false>, Eigen::Matrix, 0, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, 0, Eigen::Stride<0, 0> >, 1, -1, false>, Eigen::Matrix, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:345:45: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:44:30: required from here 44 | fittedY = newMu + newPhi * xiEst; | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 1, -1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 1, -1, false>, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::Stride<0, 0> >, 1, -1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> >, 1, -1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 1, -1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, 0, Eigen::Stride<0, 0> >, 1, -1, false, true>’ 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:44:30: required from here 44 | fittedY = newMu + newPhi * xiEst; | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 0, Eigen::Stride<0, 0> >, 1, -1, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, 0, Eigen::Stride<0, 0> >, 1, -1, false> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:372:102: required from ‘struct Eigen::internal::plain_object_eval, 0, Eigen::Stride<0, 0> >, 1, -1, false>, Eigen::Dense>’ 372 | typedef typename plain_matrix_type_dense::XprKind, evaluator::Flags>::type type; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:369:45: required from ‘struct Eigen::internal::generic_product_impl, 0, Eigen::Stride<0, 0> >, 1, -1, false>, Eigen::Matrix, Eigen::DenseShape, Eigen::DenseShape, 7>’ 369 | typedef typename nested_eval::type LhsNested; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:486:24: required from ‘static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix; Lhs = Eigen::Map, 0, Eigen::Stride<0, 0> >; Rhs = Eigen::Matrix; Scalar = double]’ 485 | return internal::generic_product_impl | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 486 | ::scaleAndAddTo(dst_vec, a_lhs.row(0), a_rhs, alpha); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:455:20: required from ‘static void Eigen::internal::generic_product_impl::addTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix; Lhs = Eigen::Map, 0, Eigen::Stride<0, 0> >; Rhs = Eigen::Matrix]’ 455 | scaleAndAddTo(dst,lhs, rhs, Scalar(1)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:163:42: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:44:30: required from here 44 | fittedY = newMu + newPhi * xiEst; | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, false> >, 1, -1, true> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, false> >, 1, -1, true> >, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, true>, -1, 1, false> >, 1, -1, true> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, 1, true>, -1, 1, false> >, 1, -1, true> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl, -1, 1, true>, -1, 1, false> >, 1, -1, true>, Eigen::Dense>’ 118 | template class TransposeImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose, -1, 1, true>, -1, 1, false> >, 1, -1, true> >’ 52 | template class Transpose | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:50:23: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/QR/ColPivHouseholderQR.h:550:35: required from ‘void Eigen::ColPivHouseholderQR::computeInPlace() [with _MatrixType = Eigen::Matrix]’ 549 | m_qr.bottomRightCorner(rows-k, cols-k-1) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 550 | .applyHouseholderOnTheLeft(m_qr.col(k).tail(rows-k-1), m_hCoeffs.coeffRef(k), &m_temp.coeffRef(k+1)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/QR/ColPivHouseholderQR.h:477:3: required from ‘Eigen::ColPivHouseholderQR<_MatrixType>& Eigen::ColPivHouseholderQR::compute(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix]’ 477 | computeInPlace(); | ^~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:229:19: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 229 | m_qr.compute(m_adjoint); | ~~~~~~~~~~~~^~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Transpose, -1, 1, true>, -1, 1, false> >, 1, -1, true> >, const Eigen::Block, -1, -1, false>, -1, -1, false>, -1, 1, true> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Transpose, -1, 1, true>, -1, 1, false> >, 1, -1, true> >, const Eigen::Block, -1, -1, false>, -1, -1, false>, -1, 1, true> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Transpose, -1, 1, true>, -1, 1, false> >, 1, -1, true> >, const Eigen::Block, -1, -1, false>, -1, -1, false>, -1, 1, true> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Transpose, -1, 1, true>, -1, 1, false> >, 1, -1, true> >, const Eigen::Block, -1, -1, false>, -1, -1, false>, -1, 1, true>, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Transpose, -1, 1, true>, -1, 1, false> >, 1, -1, true> >, const Eigen::Block, -1, -1, false>, -1, -1, false>, -1, 1, true> >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:50:56: required from ‘static Eigen::internal::dot_nocheck::ResScalar Eigen::internal::dot_nocheck::run(const Eigen::MatrixBase&, const Eigen::MatrixBase&) [with T = Eigen::Block, -1, 1, true>, -1, 1, false> >, 1, -1, true>; U = Eigen::Block, -1, -1, false>, -1, -1, false>, -1, 1, true>; ResScalar = double]’ 50 | return a.transpose().template binaryExpr(b).sum(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:84:58: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/QR/ColPivHouseholderQR.h:550:35: required from ‘void Eigen::ColPivHouseholderQR::computeInPlace() [with _MatrixType = Eigen::Matrix]’ 549 | m_qr.bottomRightCorner(rows-k, cols-k-1) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 550 | .applyHouseholderOnTheLeft(m_qr.col(k).tail(rows-k-1), m_hCoeffs.coeffRef(k), &m_temp.coeffRef(k+1)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/QR/ColPivHouseholderQR.h:477:3: required from ‘Eigen::ColPivHouseholderQR<_MatrixType>& Eigen::ColPivHouseholderQR::compute(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix]’ 477 | computeInPlace(); | ^~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:229:19: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 229 | m_qr.compute(m_adjoint); | ~~~~~~~~~~~~^~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, -1, false>, -1, 1, true>, -1, 1, false> > >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, -1, -1, false>, -1, 1, true>, -1, 1, false> > >, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, -1, false>, -1, 1, true>, -1, 1, false> > > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, -1, false>, -1, 1, true>, -1, 1, false> > > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl, -1, -1, false>, -1, 1, true>, -1, 1, false> >, Eigen::Dense>’ 118 | template class TransposeImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose, -1, -1, false>, -1, 1, true>, -1, 1, false> > >’ 52 | template class Transpose | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/BlasUtil.h:506:13: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:92:55: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 92 | if(forward) make_block_householder_triangular_factor(T, vectors, hCoeffs); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 1, -1, true>, 1, -1, false> >, -1, 1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1, -1, true>, 1, -1, false> >, -1, 1, false>, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 1, -1, true>, 1, -1, false> >, -1, 1, false>, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 1, -1, true>, 1, -1, false> >, -1, 1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1, -1, true>, 1, -1, false> >, -1, 1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 1, -1, true>, 1, -1, false> >, -1, 1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:92:55: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 92 | if(forward) make_block_householder_triangular_factor(T, vectors, hCoeffs); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose, -1, -1, false>, -1, 1, true>, -1, 1, false> > > >, -1, 1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose, -1, -1, false>, -1, 1, true>, -1, 1, false> > > >, -1, 1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose, -1, -1, false>, -1, 1, true>, -1, 1, false> > > >, -1, 1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:172:103: required from ‘class Eigen::internal::BlockImpl_dense, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose, -1, -1, false>, -1, 1, true>, -1, 1, false> > > >, -1, 1, false, false>’ 172 | template class BlockImpl_dense | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from ‘class Eigen::BlockImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose, -1, -1, false>, -1, 1, true>, -1, 1, false> > > >, -1, 1, false, Eigen::Dense>’ 154 | class BlockImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose, -1, -1, false>, -1, 1, true>, -1, 1, false> > > >, -1, 1, false>’ 103 | template class Block | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/VectorBlock.h:56:47: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:92:55: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 92 | if(forward) make_block_householder_triangular_factor(T, vectors, hCoeffs); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose, -1, -1, false>, -1, 1, true>, -1, 1, false> > > >, -1, 1, false> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose, -1, -1, false>, -1, 1, true>, -1, 1, false> > > >, -1, 1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose, -1, -1, false>, -1, 1, true>, -1, 1, false> > > >, -1, 1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose, -1, -1, false>, -1, 1, true>, -1, 1, false> > > >, -1, 1, false>, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose, -1, -1, false>, -1, 1, true>, -1, 1, false> > > >, -1, 1, false> >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixVector.h:341:54: required from ‘static void Eigen::internal::trmv_selector::run(const Lhs&, const Rhs&, Dest&, const typename Dest::Scalar&) [with Lhs = Eigen::Transpose, -1, -1, false>, -1, -1, false> >; Rhs = Eigen::Transpose, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose, -1, -1, false>, -1, 1, true>, -1, 1, false> > > >; Dest = Eigen::Transpose, 1, -1, true>, 1, -1, false> >; int Mode = 6; typename Dest::Scalar = double]’ 341 | dest.head(diagSize) -= (lhs_alpha-LhsScalar(1))*rhs.head(diagSize); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixVector.h:194:18: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:92:55: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 92 | if(forward) make_block_householder_triangular_factor(T, vectors, hCoeffs); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, false> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, false>, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, false> >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixMatrix.h:457:59: required from ‘static void Eigen::internal::triangular_product_impl::run(Dest&, const Lhs&, const Rhs&, const typename Dest::Scalar&) [with Dest = Eigen::Matrix; int Mode = 6; bool LhsIsTriangular = true; Lhs = const Eigen::Transpose, -1, -1, false> >; Rhs = Eigen::Block, -1, -1, false>; typename Dest::Scalar = double]’ 457 | dst.topRows(diagSize) -= ((lhs_alpha-LhsScalar(1))*a_rhs).topRows(diagSize); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:770:14: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:99:78: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 99 | VectorsType::MaxColsAtCompileTime,MatrixType::MaxColsAtCompileTime> tmp = V.adjoint() * mat; | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, false> >, -1, -1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, false> >, -1, -1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, false> >, -1, -1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:172:103: required from ‘class Eigen::internal::BlockImpl_dense, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, false> >, -1, -1, false, false>’ 172 | template class BlockImpl_dense | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from ‘class Eigen::BlockImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, false> >, -1, -1, false, Eigen::Dense>’ 154 | class BlockImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, false> >, -1, -1, false>’ 103 | template class Block | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixMatrix.h:457:74: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:99:78: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 99 | VectorsType::MaxColsAtCompileTime,MatrixType::MaxColsAtCompileTime> tmp = V.adjoint() * mat; | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, -1, true>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, -1, -1, true>, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, -1, -1, true>, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, -1, true> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, -1, true> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, -1, true>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:99:78: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 99 | VectorsType::MaxColsAtCompileTime,MatrixType::MaxColsAtCompileTime> tmp = V.adjoint() * mat; | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, -1, false> >, -1, -1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, -1, -1, false> >, -1, -1, false>, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, -1, false> >, -1, -1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, -1, false> >, -1, -1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, -1, false> >, -1, -1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, -1, -1, false> >, -1, -1, false, true>’ 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:99:78: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 99 | VectorsType::MaxColsAtCompileTime,MatrixType::MaxColsAtCompileTime> tmp = V.adjoint() * mat; | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Matrix > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Matrix > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp, const Eigen::Matrix >’ 60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp >::type, internal::no_assignment_operator | ^~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28: required from ‘struct Eigen::internal::traits, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, false> >, -1, -1, false> > >’ 38 | >::type Scalar; | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, false> >, -1, -1, false>, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:99:78: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 99 | VectorsType::MaxColsAtCompileTime,MatrixType::MaxColsAtCompileTime> tmp = V.adjoint() * mat; | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, false> >, -1, -1, false> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, false> >, -1, -1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, false> >, -1, -1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, false> >, -1, -1, false>, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, false> >, -1, -1, false> >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixMatrix.h:462:59: required from ‘static void Eigen::internal::triangular_product_impl::run(Dest&, const Lhs&, const Rhs&, const typename Dest::Scalar&) [with Dest = Eigen::Matrix; int Mode = 6; bool LhsIsTriangular = true; Lhs = const Eigen::Transpose, -1, -1, false> >; Rhs = Eigen::Block, -1, -1, false>; typename Dest::Scalar = double]’ 462 | dst.leftCols(diagSize) -= (rhs_alpha-RhsScalar(1))*a_lhs.leftCols(diagSize); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:770:14: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:99:78: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 99 | VectorsType::MaxColsAtCompileTime,MatrixType::MaxColsAtCompileTime> tmp = V.adjoint() * mat; | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of ‘void Eigen::internal::gemm_pack_rhs::operator()(Scalar*, const DataMapper&, Index, Index, Index, Index) [with Scalar = double; Index = long int; DataMapper = Eigen::internal::const_blas_data_mapper; int nr = 4; bool Conjugate = false; bool PanelMode = false]’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixMatrix.h:175:15: required from ‘static void Eigen::internal::product_triangular_matrix_matrix::run(Index, Index, Index, const Scalar*, Index, const Scalar*, Index, Scalar*, Index, Index, const Scalar&, Eigen::internal::level3_blocking&) [with Scalar = double; Index = long int; int Mode = 5; int LhsStorageOrder = 0; bool ConjugateLhs = false; int RhsStorageOrder = 0; bool ConjugateRhs = false; int ResInnerStride = 1; int Version = 0]’ 175 | pack_rhs(blockB, rhs.getSubMapper(actual_k2,0), actual_kc, cols); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixMatrix.h:443:12: required from ‘static void Eigen::internal::triangular_product_impl::run(Dest&, const Lhs&, const Rhs&, const typename Dest::Scalar&) [with Dest = Eigen::Block, -1, -1, false>; int Mode = 5; bool LhsIsTriangular = true; Lhs = const Eigen::Block, -1, -1, false>; Rhs = Eigen::Matrix; typename Dest::Scalar = double]’ 438 | internal::product_triangular_matrix_matrix::Flags&RowMajorBit) ? RowMajor : ColMajor, LhsBlasTraits::NeedToConjugate, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 | (internal::traits::Flags&RowMajorBit) ? RowMajor : ColMajor, RhsBlasTraits::NeedToConjugate, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 | (internal::traits::Flags&RowMajorBit) ? RowMajor : ColMajor, Dest::InnerStrideAtCompileTime> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 | ::run( | ~~~~~^ 444 | stripedRows, stripedCols, stripedDepth, // sizes | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 | &lhs.coeffRef(0,0), lhs.outerStride(), // lhs info | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 | &rhs.coeffRef(0,0), rhs.outerStride(), // rhs info | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 | &dst.coeffRef(0,0), dst.innerStride(), dst.outerStride(), // result info | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 | actualAlpha, blocking | ~~~~~~~~~~~~~~~~~~~~~ 449 | ); | ~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:770:14: required from ‘static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Block, -1, -1, false>; Lhs = Eigen::TriangularView, -1, -1, false>, 5>; Rhs = Eigen::Matrix; int ProductTag = 8; Scalar = double]’ 769 | triangular_product_impl | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 770 | ::run(dst, lhs.nestedExpression(), rhs, alpha); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:361:27: required from ‘static void Eigen::internal::generic_product_impl_base::scaleAndAddTo(Dst&, const Lhs&, const Rhs&, const Scalar&) [with Dst = Eigen::Block, -1, -1, false>; Lhs = Eigen::TriangularView, -1, -1, false>, 5>; Rhs = Eigen::Matrix; Derived = Eigen::internal::generic_product_impl, -1, -1, false>, 5>, Eigen::Matrix, Eigen::TriangularShape, Eigen::DenseShape, 8>; Scalar = double]’ 361 | { Derived::scaleAndAddTo(dst,lhs,rhs,alpha); } | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:357:18: required from ‘static void Eigen::internal::generic_product_impl_base::subTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Block, -1, -1, false>; Lhs = Eigen::TriangularView, -1, -1, false>, 5>; Rhs = Eigen::Matrix; Derived = Eigen::internal::generic_product_impl, -1, -1, false>, 5>, Eigen::Matrix, Eigen::TriangularShape, Eigen::DenseShape, 8>]’ 357 | { scaleAndAddTo(dst, lhs, rhs, Scalar(-1)); } | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:178:42: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:103:17: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 103 | mat.noalias() -= V * tmp; | ~~~~~~~~~~~~~~^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2459:62: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 2459 | PacketBlock kernel; | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, Eigen::DiagonalWrapper >, 1>, -1, 1, true> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, Eigen::DiagonalWrapper >, 1>, -1, 1, true> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:78: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, Eigen::DiagonalWrapper >, 1>, -1, 1, true> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ 739 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8: required from ‘struct Eigen::internal::evaluator, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, Eigen::DiagonalWrapper >, 1>, -1, 1, true> > >’ 722 | struct evaluator > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:774:20: required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, 1, true>; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, Eigen::DiagonalWrapper >, 1>, -1, 1, true> >; Functor = add_assign_op]’ 774 | SrcEvaluatorType srcEvaluator(src); | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31: required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, 1, true>; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, Eigen::DiagonalWrapper >, 1>, -1, 1, true> >; Functor = Eigen::internal::add_assign_op; Weak = void]’ 954 | call_dense_assignment_loop(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Product, Eigen::DiagonalWrapper >, 1>; Rhs = Eigen::Transpose >; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>]’ 148 | generic_product_impl::evalTo(dst, src.lhs(), src.rhs()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 797 | internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 594 | _set_noalias(other); | ~~~~~~~~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 423 | : Base(other.derived()) | ^ GetIndCEScoresCPPnewInd.cpp:23:44: required from here 23 | return(svdMat.matrixV()*Sinv.asDiagonal()*svdMat.matrixU().transpose()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, -1, 1, true> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, -1, 1, true> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, -1, 1, true> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, -1, 1, true>, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, -1, 1, true> >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:50:56: required from ‘static Eigen::internal::dot_nocheck::ResScalar Eigen::internal::dot_nocheck::run(const Eigen::MatrixBase&, const Eigen::MatrixBase&) [with T = Eigen::Block, 1, -1, false>; U = Eigen::Block, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, -1, 1, true>; ResScalar = double]’ 50 | return a.transpose().template binaryExpr(b).sum(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:84:58: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:41:51: required from here 41 | xiEst = LamPhi * ldlt_SigmaYi.solve(yVec - muVec) ;// LamPhiSig * (yVec - muVec); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Transpose, const Eigen::Matrix >, 1, -1, false> >, const Eigen::Block, 1>, Eigen::Transpose > >, -1, 1, false>, -1, 1, true> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Transpose, const Eigen::Matrix >, 1, -1, false> >, const Eigen::Block, 1>, Eigen::Transpose > >, -1, 1, false>, -1, 1, true> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Transpose, const Eigen::Matrix >, 1, -1, false> >, const Eigen::Block, 1>, Eigen::Transpose > >, -1, 1, false>, -1, 1, true> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Transpose, const Eigen::Matrix >, 1, -1, false> >, const Eigen::Block, 1>, Eigen::Transpose > >, -1, 1, false>, -1, 1, true>, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Transpose, const Eigen::Matrix >, 1, -1, false> >, const Eigen::Block, 1>, Eigen::Transpose > >, -1, 1, false>, -1, 1, true> >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:50:56: required from ‘static Eigen::internal::dot_nocheck::ResScalar Eigen::internal::dot_nocheck::run(const Eigen::MatrixBase&, const Eigen::MatrixBase&) [with T = Eigen::Block, const Eigen::Matrix >, 1, -1, false>; U = Eigen::Block, 1>, Eigen::Transpose > >, -1, 1, false>, -1, 1, true>; ResScalar = double]’ 50 | return a.transpose().template binaryExpr(b).sum(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:84:58: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:42:58: required from here 42 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 1, -1, false>, 1, -1, true> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Matrix >, 1, -1, false>, 1, -1, true> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Matrix >, 1, -1, false>, 1, -1, true> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl, const Eigen::Matrix >, 1, -1, false>, 1, -1, true>, Eigen::Dense>’ 118 | template class TransposeImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose, const Eigen::Matrix >, 1, -1, false>, 1, -1, true> >’ 52 | template class Transpose | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:50:23: required from ‘static Eigen::internal::dot_nocheck::ResScalar Eigen::internal::dot_nocheck::run(const Eigen::MatrixBase&, const Eigen::MatrixBase&) [with T = Eigen::Block, const Eigen::Matrix >, 1, -1, false>, 1, -1, true>; U = Eigen::Block, 1>, Eigen::Transpose > >, -1, 1, false>; ResScalar = double]’ 50 | return a.transpose().template binaryExpr(b).sum(); | ~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:84:58: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:42:58: required from here 42 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Transpose, const Eigen::Matrix >, 1, -1, false>, 1, -1, true> >, const Eigen::Block, 1>, Eigen::Transpose > >, -1, 1, false> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Transpose, const Eigen::Matrix >, 1, -1, false>, 1, -1, true> >, const Eigen::Block, 1>, Eigen::Transpose > >, -1, 1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Transpose, const Eigen::Matrix >, 1, -1, false>, 1, -1, true> >, const Eigen::Block, 1>, Eigen::Transpose > >, -1, 1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Transpose, const Eigen::Matrix >, 1, -1, false>, 1, -1, true> >, const Eigen::Block, 1>, Eigen::Transpose > >, -1, 1, false>, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Transpose, const Eigen::Matrix >, 1, -1, false>, 1, -1, true> >, const Eigen::Block, 1>, Eigen::Transpose > >, -1, 1, false> >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:50:56: required from ‘static Eigen::internal::dot_nocheck::ResScalar Eigen::internal::dot_nocheck::run(const Eigen::MatrixBase&, const Eigen::MatrixBase&) [with T = Eigen::Block, const Eigen::Matrix >, 1, -1, false>, 1, -1, true>; U = Eigen::Block, 1>, Eigen::Transpose > >, -1, 1, false>; ResScalar = double]’ 50 | return a.transpose().template binaryExpr(b).sum(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:84:58: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:42:58: required from here 42 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 1>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 1> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 1> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 1, 8>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 1, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 1>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:462:68: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:44:30: required from here 44 | fittedY = newMu + newPhi * xiEst; | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, true>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, true>, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, true>, -1, 1, true> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, 1, true>, -1, 1, true> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, 1, true>, -1, 1, true>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, -1, 1, true>, -1, 1, true, true>’ 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:44:30: required from here 44 | fittedY = newMu + newPhi * xiEst; | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 1, -1, false>, 1, -1, true>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 1, -1, false>, 1, -1, true>, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::Stride<0, 0> >, 1, -1, false>, 1, -1, true> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> >, 1, -1, false>, 1, -1, true> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 1, -1, false>, 1, -1, true>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, 0, Eigen::Stride<0, 0> >, 1, -1, false>, 1, -1, true, true>’ 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:44:30: required from here 44 | fittedY = newMu + newPhi * xiEst; | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, -1, false>, -1, -1, false>, 1, -1, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, -1, -1, false>, -1, -1, false>, 1, -1, false> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:311:41: required from ‘struct Eigen::internal::unary_evaluator, -1, -1, false>, -1, -1, false>, 1, -1, false> >, Eigen::internal::IndexBased, double>’ 311 | CoeffReadCost = evaluator::CoeffReadCost, | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator, -1, -1, false>, -1, -1, false>, 1, -1, false> > >’ 90 | struct evaluator : public unary_evaluator | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, -1, -1, false>, -1, -1, false>, 1, -1, false> > >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:41: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::Transpose, -1, -1, false>, -1, -1, false>, 1, -1, false> >, const Eigen::Block, -1, 1, false>, -1, 1, true> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ 739 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/Householder.h:167:19: required from ‘void Eigen::MatrixBase::applyHouseholderOnTheRight(const EssentialPart&, const Scalar&, Scalar*) [with EssentialPart = Eigen::Block, -1, 1, false>; Derived = Eigen::Block, -1, -1, false>; Scalar = double]’ 167 | tmp.noalias() = right * essential; | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:304:43: required from ‘void Eigen::HouseholderSequence::evalTo(Dest&, Workspace&) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 303 | dst.bottomRightCorner(cornerSize, cornerSize) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 | .applyHouseholderOnTheRight(essentialVector(k), m_coeffs.coeff(k), workspace.data()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:232:56: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 232 | if(svd.m_computeFullV) m_qr.householderQ().evalTo(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, 1, false>, -1, 1, true> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, -1, 1, false>, -1, 1, true> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:78: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::Transpose, -1, -1, false>, -1, -1, false>, 1, -1, false> >, const Eigen::Block, -1, 1, false>, -1, 1, true> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ 739 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8: required from ‘struct Eigen::internal::evaluator, const Eigen::Transpose, -1, -1, false>, -1, -1, false>, 1, -1, false> >, const Eigen::Block, -1, 1, false>, -1, 1, true> > >’ 722 | struct evaluator > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:357:7: required from ‘class Eigen::internal::redux_evaluator, const Eigen::Transpose, -1, -1, false>, -1, -1, false>, 1, -1, false> >, const Eigen::Block, -1, 1, false>, -1, 1, true> > >’ 357 | class redux_evaluator : public internal::evaluator<_XprType> | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:414:17: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseBinaryOp, const Eigen::Transpose, -1, -1, false>, -1, -1, false>, 1, -1, false> >, const Eigen::Block, -1, 1, false>, -1, 1, true> >; typename Eigen::internal::traits::Scalar = double]’ 414 | ThisEvaluator thisEval(derived()); | ^~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/Householder.h:167:19: required from ‘void Eigen::MatrixBase::applyHouseholderOnTheRight(const EssentialPart&, const Scalar&, Scalar*) [with EssentialPart = Eigen::Block, -1, 1, false>; Derived = Eigen::Block, -1, -1, false>; Scalar = double]’ 167 | tmp.noalias() = right * essential; | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:304:43: required from ‘void Eigen::HouseholderSequence::evalTo(Dest&, Workspace&) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 303 | dst.bottomRightCorner(cornerSize, cornerSize) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 | .applyHouseholderOnTheRight(essentialVector(k), m_coeffs.coeff(k), workspace.data()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:232:56: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 232 | if(svd.m_computeFullV) m_qr.householderQ().evalTo(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, 1, false> >, 1, -1, true> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, -1, 1, false> >, 1, -1, true> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:311:41: required from ‘struct Eigen::internal::unary_evaluator, -1, 1, false> >, 1, -1, true> >, Eigen::internal::IndexBased, double>’ 311 | CoeffReadCost = evaluator::CoeffReadCost, | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator, -1, 1, false> >, 1, -1, true> > >’ 90 | struct evaluator : public unary_evaluator | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, -1, 1, false> >, 1, -1, true> > >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:41: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::Transpose, -1, 1, false> >, 1, -1, true> >, const Eigen::Block, -1, -1, false>, -1, -1, false>, -1, 1, true> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ 739 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/Householder.h:129:19: required from ‘void Eigen::MatrixBase::applyHouseholderOnTheLeft(const EssentialPart&, const Scalar&, Scalar*) [with EssentialPart = Eigen::Block, -1, 1, false>; Derived = Eigen::Block, -1, -1, false>; Scalar = double]’ 129 | tmp.noalias() = essential.adjoint() * bottom; | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:307:42: required from ‘void Eigen::HouseholderSequence::evalTo(Dest&, Workspace&) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 306 | dst.bottomRightCorner(cornerSize, cornerSize) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 | .applyHouseholderOnTheLeft(essentialVector(k), m_coeffs.coeff(k), workspace.data()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:232:56: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 232 | if(svd.m_computeFullV) m_qr.householderQ().evalTo(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, -1, false>, -1, -1, false>, -1, 1, true> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, -1, -1, false>, -1, -1, false>, -1, 1, true> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:78: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::Transpose, -1, 1, false> >, 1, -1, true> >, const Eigen::Block, -1, -1, false>, -1, -1, false>, -1, 1, true> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ 739 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8: required from ‘struct Eigen::internal::evaluator, const Eigen::Transpose, -1, 1, false> >, 1, -1, true> >, const Eigen::Block, -1, -1, false>, -1, -1, false>, -1, 1, true> > >’ 722 | struct evaluator > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:357:7: required from ‘class Eigen::internal::redux_evaluator, const Eigen::Transpose, -1, 1, false> >, 1, -1, true> >, const Eigen::Block, -1, -1, false>, -1, -1, false>, -1, 1, true> > >’ 357 | class redux_evaluator : public internal::evaluator<_XprType> | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:414:17: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseBinaryOp, const Eigen::Transpose, -1, 1, false> >, 1, -1, true> >, const Eigen::Block, -1, -1, false>, -1, -1, false>, -1, 1, true> >; typename Eigen::internal::traits::Scalar = double]’ 414 | ThisEvaluator thisEval(derived()); | ^~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/Householder.h:129:19: required from ‘void Eigen::MatrixBase::applyHouseholderOnTheLeft(const EssentialPart&, const Scalar&, Scalar*) [with EssentialPart = Eigen::Block, -1, 1, false>; Derived = Eigen::Block, -1, -1, false>; Scalar = double]’ 129 | tmp.noalias() = essential.adjoint() * bottom; | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:307:42: required from ‘void Eigen::HouseholderSequence::evalTo(Dest&, Workspace&) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 306 | dst.bottomRightCorner(cornerSize, cornerSize) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 | .applyHouseholderOnTheLeft(essentialVector(k), m_coeffs.coeff(k), workspace.data()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:232:56: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 232 | if(svd.m_computeFullV) m_qr.householderQ().evalTo(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::OuterStride<> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::OuterStride<> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::OuterStride<> >, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map, 0, Eigen::OuterStride<> >’ 94 | template class Map | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixVector.h:115:18: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:92:55: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 92 | if(forward) make_block_householder_triangular_factor(T, vectors, hCoeffs); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map, 0, Eigen::Stride<0, 0> >’ 94 | template class Map | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixVector.h:119:18: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:92:55: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 92 | if(forward) make_block_householder_triangular_factor(T, vectors, hCoeffs); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::InnerStride<> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::InnerStride<> >, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::InnerStride<> >, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::InnerStride<> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::InnerStride<> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::InnerStride<> >, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:92:55: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 92 | if(forward) make_block_householder_triangular_factor(T, vectors, hCoeffs); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 1, -1, true>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 1, -1, true>, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::OuterStride<> >, 1, -1, true> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::OuterStride<> >, 1, -1, true> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::OuterStride<> >, 1, -1, true>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, 0, Eigen::OuterStride<> >, 1, -1, true, true>’ 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:92:55: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 92 | if(forward) make_block_householder_triangular_factor(T, vectors, hCoeffs); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false>, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false, true>’ 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:92:55: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 92 | if(forward) make_block_householder_triangular_factor(T, vectors, hCoeffs); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, -1, 1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, -1, 1, false>, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::Stride<0, 0> >, -1, 1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> >, -1, 1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, -1, 1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, 0, Eigen::Stride<0, 0> >, -1, 1, false, true>’ 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:92:55: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 92 | if(forward) make_block_householder_triangular_factor(T, vectors, hCoeffs); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, -1, 1, false> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, -1, 1, false> >, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::Stride<0, 0> >, -1, 1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> >, -1, 1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl, 0, Eigen::Stride<0, 0> >, -1, 1, false>, Eigen::Dense>’ 118 | template class TransposeImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose, 0, Eigen::Stride<0, 0> >, -1, 1, false> >’ 52 | template class Transpose | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixVector.h:137:106: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:92:55: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 92 | if(forward) make_block_householder_triangular_factor(T, vectors, hCoeffs); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Block, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false>, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, -1, 1, false> > >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Block, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false>, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, -1, 1, false> > > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Block, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false>, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, -1, 1, false> > > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Block, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false>, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, -1, 1, false> >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Block, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false>, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, -1, 1, false> > >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixVector.h:137:77: required from ‘static void Eigen::internal::triangular_matrix_vector_product::run(Index, Index, const LhsScalar*, Index, const RhsScalar*, Index, ResScalar*, Index, const ResScalar&) [with Index = long int; int Mode = 6; LhsScalar = double; bool ConjLhs = false; RhsScalar = double; bool ConjRhs = false; int Version = 0; ResScalar = double]’ 137 | res.coeffRef(i) += alpha * (cjLhs.row(i).segment(s,r).cwiseProduct(cjRhs.segment(s,r).transpose())).sum(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixVector.h:332:12: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:92:55: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 92 | if(forward) make_block_householder_triangular_factor(T, vectors, hCoeffs); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:99:78: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 99 | VectorsType::MaxColsAtCompileTime,MatrixType::MaxColsAtCompileTime> tmp = V.adjoint() * mat; | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 0>, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 0>, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Diagonal.h:63:53: required from ‘class Eigen::Diagonal, 0>’ 63 | template class Diagonal | ^~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixMatrix.h:153:32: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:99:78: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 99 | VectorsType::MaxColsAtCompileTime,MatrixType::MaxColsAtCompileTime> tmp = V.adjoint() * mat; | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::Matrix > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, Eigen::Matrix > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp, Eigen::Matrix >’ 60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp >::type, internal::no_assignment_operator | ^~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:347:30: required from ‘Derived& Eigen::DenseBase::setConstant(const Scalar&) [with Derived = Eigen::Matrix; Scalar = double]’ 347 | return derived() = Constant(rows(), cols(), val); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:548:10: required from ‘Derived& Eigen::DenseBase::setZero() [with Derived = Eigen::Matrix]’ 548 | return setConstant(Scalar(0)); | ^~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixMatrix.h:151:29: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:103:17: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 103 | mat.noalias() -= V * tmp; | ~~~~~~~~~~~~~~^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::Matrix > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, Eigen::Matrix > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp, Eigen::Matrix >’ 60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp >::type, internal::no_assignment_operator | ^~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:347:30: required from ‘Derived& Eigen::DenseBase::setConstant(const Scalar&) [with Derived = Eigen::Diagonal, 0>; Scalar = double]’ 347 | return derived() = Constant(rows(), cols(), val); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:548:10: required from ‘Derived& Eigen::DenseBase::setZero() [with Derived = Eigen::Diagonal, 0>]’ 548 | return setConstant(Scalar(0)); | ^~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixMatrix.h:153:42: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:103:17: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 103 | mat.noalias() -= V * tmp; | ~~~~~~~~~~~~~~^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 1, -1, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, 1, -1, false> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:311:41: required from ‘struct Eigen::internal::unary_evaluator, 1, -1, false> >, Eigen::internal::IndexBased, double>’ 311 | CoeffReadCost = evaluator::CoeffReadCost, | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator, 1, -1, false> > >’ 90 | struct evaluator : public unary_evaluator | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, 1, -1, false> > >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:41: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block >, -1, 1, false> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ 739 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Product, Eigen::DiagonalWrapper >, 1>; Rhs = Eigen::Transpose >; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>]’ 148 | generic_product_impl::evalTo(dst, src.lhs(), src.rhs()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 797 | internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; Derived = Eigen::Matrix]’ 594 | _set_noalias(other); | ~~~~~~~~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, Eigen::DiagonalWrapper >, 1>, Eigen::Transpose >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 423 | : Base(other.derived()) | ^ GetIndCEScoresCPPnewInd.cpp:23:44: required from here 23 | return(svdMat.matrixV()*Sinv.asDiagonal()*svdMat.matrixU().transpose()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 1, 1, false> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1, 1, false> >, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 1, 1, false> >, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 1, 1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1, 1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl, 1, 1, false>, Eigen::Dense>’ 118 | template class TransposeImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:44:30: required from here 44 | fittedY = newMu + newPhi * xiEst; | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 1, -1, false> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 1, -1, false> >, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::Stride<0, 0> >, 1, -1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> >, 1, -1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl, 0, Eigen::Stride<0, 0> >, 1, -1, false>, Eigen::Dense>’ 118 | template class TransposeImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose, 0, Eigen::Stride<0, 0> >, 1, -1, false> >’ 52 | template class Transpose | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:207:43: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:44:30: required from here 44 | fittedY = newMu + newPhi * xiEst; | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, 1, true>, -1, 1, false> >, 1, -1, true> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, -1, 1, true>, -1, 1, false> >, 1, -1, true> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:311:41: required from ‘struct Eigen::internal::unary_evaluator, -1, 1, true>, -1, 1, false> >, 1, -1, true> >, Eigen::internal::IndexBased, double>’ 311 | CoeffReadCost = evaluator::CoeffReadCost, | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator, -1, 1, true>, -1, 1, false> >, 1, -1, true> > >’ 90 | struct evaluator : public unary_evaluator | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, -1, 1, true>, -1, 1, false> >, 1, -1, true> > >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:41: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::Transpose, -1, 1, true>, -1, 1, false> >, 1, -1, true> >, const Eigen::Block, -1, -1, false>, -1, -1, false>, -1, 1, true> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ 739 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/QR/ColPivHouseholderQR.h:550:35: required from ‘void Eigen::ColPivHouseholderQR::computeInPlace() [with _MatrixType = Eigen::Matrix]’ 549 | m_qr.bottomRightCorner(rows-k, cols-k-1) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 550 | .applyHouseholderOnTheLeft(m_qr.col(k).tail(rows-k-1), m_hCoeffs.coeffRef(k), &m_temp.coeffRef(k+1)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/QR/ColPivHouseholderQR.h:477:3: required from ‘Eigen::ColPivHouseholderQR<_MatrixType>& Eigen::ColPivHouseholderQR::compute(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix]’ 477 | computeInPlace(); | ^~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:229:19: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 229 | m_qr.compute(m_adjoint); | ~~~~~~~~~~~~^~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, -1, false>, -1, -1, false>, -1, 1, true> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:780:20: required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, -1, false>, -1, -1, false>, -1, 1, true>; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 16, Eigen::Stride<0, 0> > >; Functor = sub_assign_op]’ 780 | DstEvaluatorType dstEvaluator(dst); | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31: required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, -1, false>, -1, -1, false>, -1, 1, true>; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 16, Eigen::Stride<0, 0> > >; Functor = Eigen::internal::sub_assign_op; Weak = void]’ 954 | call_dense_assignment_loop(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, -1, false>, -1, -1, false>, -1, 1, true>; Src = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 16, Eigen::Stride<0, 0> > >; Func = sub_assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:858:27: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block, -1, -1, false>, -1, -1, false>, -1, 1, true>; Src = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 16, Eigen::Stride<0, 0> > >; Func = sub_assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 858 | call_assignment_no_alias(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:164:18: required from ‘Derived& Eigen::MatrixBase::operator-=(const Eigen::MatrixBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 16, Eigen::Stride<0, 0> > >; Derived = Eigen::Block, -1, -1, false>, -1, -1, false>, -1, 1, true>]’ 164 | call_assignment(derived(), other.derived(), internal::sub_assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:305:153: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/Householder.h:170:21: required from ‘void Eigen::MatrixBase::applyHouseholderOnTheRight(const EssentialPart&, const Scalar&, Scalar*) [with EssentialPart = Eigen::Block, -1, 1, false>; Derived = Eigen::Block, -1, -1, false>; Scalar = double]’ 170 | right.noalias() -= tau * tmp * essential.adjoint(); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:304:43: required from ‘void Eigen::HouseholderSequence::evalTo(Dest&, Workspace&) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 303 | dst.bottomRightCorner(cornerSize, cornerSize) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 | .applyHouseholderOnTheRight(essentialVector(k), m_coeffs.coeff(k), workspace.data()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:232:56: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 232 | if(svd.m_computeFullV) m_qr.householderQ().evalTo(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of ‘void Eigen::internal::gemm_pack_lhs::operator()(Scalar*, const DataMapper&, Index, Index, Index, Index) [with Scalar = double; Index = long int; DataMapper = Eigen::internal::const_blas_data_mapper; int Pack1 = 4; int Pack2 = 2; Packet = __vector(2) double; bool Conjugate = false; bool PanelMode = false]’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixMatrix.h:203:19: required from ‘static void Eigen::internal::product_triangular_matrix_matrix::run(Index, Index, Index, const Scalar*, Index, const Scalar*, Index, Scalar*, Index, Index, const Scalar&, Eigen::internal::level3_blocking&) [with Scalar = double; Index = long int; int Mode = 6; int LhsStorageOrder = 1; bool ConjugateLhs = false; int RhsStorageOrder = 0; bool ConjugateRhs = false; int ResInnerStride = 1; int Version = 0]’ 203 | pack_lhs(blockA, LhsMapper(triangularBuffer.data(), triangularBuffer.outerStride()), actualPanelWidth, actualPanelWidth); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixMatrix.h:443:12: required from ‘static void Eigen::internal::triangular_product_impl::run(Dest&, const Lhs&, const Rhs&, const typename Dest::Scalar&) [with Dest = Eigen::Matrix; int Mode = 6; bool LhsIsTriangular = true; Lhs = const Eigen::Transpose, -1, -1, false> >; Rhs = Eigen::Block, -1, -1, false>; typename Dest::Scalar = double]’ 438 | internal::product_triangular_matrix_matrix::Flags&RowMajorBit) ? RowMajor : ColMajor, LhsBlasTraits::NeedToConjugate, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 | (internal::traits::Flags&RowMajorBit) ? RowMajor : ColMajor, RhsBlasTraits::NeedToConjugate, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 | (internal::traits::Flags&RowMajorBit) ? RowMajor : ColMajor, Dest::InnerStrideAtCompileTime> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 | ::run( | ~~~~~^ 444 | stripedRows, stripedCols, stripedDepth, // sizes | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 | &lhs.coeffRef(0,0), lhs.outerStride(), // lhs info | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 | &rhs.coeffRef(0,0), rhs.outerStride(), // rhs info | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 | &dst.coeffRef(0,0), dst.innerStride(), dst.outerStride(), // result info | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 | actualAlpha, blocking | ~~~~~~~~~~~~~~~~~~~~~ 449 | ); | ~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:770:14: required from ‘static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix; Lhs = Eigen::TriangularView, -1, -1, false> >, 6>; Rhs = Eigen::Block, -1, -1, false>; int ProductTag = 8; Scalar = double]’ 769 | triangular_product_impl | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 770 | ::run(dst, lhs.nestedExpression(), rhs, alpha); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:361:27: required from ‘static void Eigen::internal::generic_product_impl_base::scaleAndAddTo(Dst&, const Lhs&, const Rhs&, const Scalar&) [with Dst = Eigen::Matrix; Lhs = Eigen::TriangularView, -1, -1, false> >, 6>; Rhs = Eigen::Block, -1, -1, false>; Derived = Eigen::internal::generic_product_impl, -1, -1, false> >, 6>, Eigen::Block, -1, -1, false>, Eigen::TriangularShape, Eigen::DenseShape, 8>; Scalar = double]’ 361 | { Derived::scaleAndAddTo(dst,lhs,rhs,alpha); } | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:349:33: required from ‘static void Eigen::internal::generic_product_impl_base::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix; Lhs = Eigen::TriangularView, -1, -1, false> >, 6>; Rhs = Eigen::Block, -1, -1, false>; Derived = Eigen::internal::generic_product_impl, -1, -1, false> >, 6>, Eigen::Block, -1, -1, false>, Eigen::TriangularShape, Eigen::DenseShape, 8>]’ 349 | { dst.setZero(); scaleAndAddTo(dst, lhs, rhs, Scalar(1)); } | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:99:78: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 99 | VectorsType::MaxColsAtCompileTime,MatrixType::MaxColsAtCompileTime> tmp = V.adjoint() * mat; | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2256:82: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 2256 | typedef typename unpacket_traits::half>::half QuarterPacket; | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2258:56: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 2258 | HalfPacketSize = unpacket_traits::size, | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2259:62: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 2259 | QuarterPacketSize = unpacket_traits::size, | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2259:62: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2298:39: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 2298 | PacketBlock kernel_half; | ^~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2298:39: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2304:42: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 2304 | PacketBlock kernel_quarter; | ^~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2304:42: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2304:42: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2304:42: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, -1, 1, true> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, -1, 1, true> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:78: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, -1, 1, true> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ 739 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8: required from ‘struct Eigen::internal::evaluator, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, -1, 1, true> > >’ 722 | struct evaluator > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:357:7: required from ‘class Eigen::internal::redux_evaluator, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, -1, 1, true> > >’ 357 | class redux_evaluator : public internal::evaluator<_XprType> | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:414:17: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseBinaryOp, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, -1, 1, true> >; typename Eigen::internal::traits::Scalar = double]’ 414 | ThisEvaluator thisEval(derived()); | ^~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:41:51: required from here 41 | xiEst = LamPhi * ldlt_SigmaYi.solve(yVec - muVec) ;// LamPhiSig * (yVec - muVec); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 1>, Eigen::Transpose > >, -1, 1, false>, -1, 1, true> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, 1>, Eigen::Transpose > >, -1, 1, false>, -1, 1, true> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:78: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::Transpose, const Eigen::Matrix >, 1, -1, false> >, const Eigen::Block, 1>, Eigen::Transpose > >, -1, 1, false>, -1, 1, true> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ 739 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8: required from ‘struct Eigen::internal::evaluator, const Eigen::Transpose, const Eigen::Matrix >, 1, -1, false> >, const Eigen::Block, 1>, Eigen::Transpose > >, -1, 1, false>, -1, 1, true> > >’ 722 | struct evaluator > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:357:7: required from ‘class Eigen::internal::redux_evaluator, const Eigen::Transpose, const Eigen::Matrix >, 1, -1, false> >, const Eigen::Block, 1>, Eigen::Transpose > >, -1, 1, false>, -1, 1, true> > >’ 357 | class redux_evaluator : public internal::evaluator<_XprType> | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:414:17: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseBinaryOp, const Eigen::Transpose, const Eigen::Matrix >, 1, -1, false> >, const Eigen::Block, 1>, Eigen::Transpose > >, -1, 1, false>, -1, 1, true> >; typename Eigen::internal::traits::Scalar = double]’ 414 | ThisEvaluator thisEval(derived()); | ^~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:42:58: required from here 42 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, const Eigen::Matrix >, 1, -1, false>, 1, -1, true> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, const Eigen::Matrix >, 1, -1, false>, 1, -1, true> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:311:41: required from ‘struct Eigen::internal::unary_evaluator, const Eigen::Matrix >, 1, -1, false>, 1, -1, true> >, Eigen::internal::IndexBased, double>’ 311 | CoeffReadCost = evaluator::CoeffReadCost, | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator, const Eigen::Matrix >, 1, -1, false>, 1, -1, true> > >’ 90 | struct evaluator : public unary_evaluator | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, const Eigen::Matrix >, 1, -1, false>, 1, -1, true> > >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:41: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::Transpose, const Eigen::Matrix >, 1, -1, false>, 1, -1, true> >, const Eigen::Block, 1>, Eigen::Transpose > >, -1, 1, false> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ 739 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:42:58: required from here 42 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, 1, -1, false> >, const Eigen::Block, -1, 1, true>, -1, 1, true> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, 1, -1, false> >, const Eigen::Block, -1, 1, true>, -1, 1, true> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, 1, -1, false> >, const Eigen::Block, -1, 1, true>, -1, 1, true> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, 1, -1, false> >, const Eigen::Block, -1, 1, true>, -1, 1, true>, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, 1, -1, false> >, const Eigen::Block, -1, 1, true>, -1, 1, true> >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:50:56: required from ‘static Eigen::internal::dot_nocheck::ResScalar Eigen::internal::dot_nocheck::run(const Eigen::MatrixBase&, const Eigen::MatrixBase&) [with T = Eigen::Block, 0, Eigen::Stride<0, 0> >, 1, -1, false>; U = Eigen::Block, -1, 1, true>, -1, 1, true>; ResScalar = double]’ 50 | return a.transpose().template binaryExpr(b).sum(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:84:58: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:44:30: required from here 44 | fittedY = newMu + newPhi * xiEst; | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 1, -1, false>, 1, -1, true> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 1, -1, false>, 1, -1, true> >, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::Stride<0, 0> >, 1, -1, false>, 1, -1, true> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> >, 1, -1, false>, 1, -1, true> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl, 0, Eigen::Stride<0, 0> >, 1, -1, false>, 1, -1, true>, Eigen::Dense>’ 118 | template class TransposeImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose, 0, Eigen::Stride<0, 0> >, 1, -1, false>, 1, -1, true> >’ 52 | template class Transpose | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:50:23: [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:44:30: required from here 44 | fittedY = newMu + newPhi * xiEst; | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, 1, -1, false>, 1, -1, true> >, const Eigen::Block, -1, 1, true> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, 1, -1, false>, 1, -1, true> >, const Eigen::Block, -1, 1, true> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, 1, -1, false>, 1, -1, true> >, const Eigen::Block, -1, 1, true> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, 1, -1, false>, 1, -1, true> >, const Eigen::Block, -1, 1, true>, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, 1, -1, false>, 1, -1, true> >, const Eigen::Block, -1, 1, true> >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:50:56: required from ‘static Eigen::internal::dot_nocheck::ResScalar Eigen::internal::dot_nocheck::run(const Eigen::MatrixBase&, const Eigen::MatrixBase&) [with T = Eigen::Block, 0, Eigen::Stride<0, 0> >, 1, -1, false>, 1, -1, true>; U = Eigen::Block, -1, 1, true>; ResScalar = double]’ 50 | return a.transpose().template binaryExpr(b).sum(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:84:58: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:44:30: required from here 44 | fittedY = newMu + newPhi * xiEst; | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 1, 1, false> >, 1, 1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1, 1, false> >, 1, 1, false>, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 1, 1, false> >, 1, 1, false>, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 1, 1, false> >, 1, 1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1, 1, false> >, 1, 1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 1, 1, false> >, 1, 1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:44:30: required from here 44 | fittedY = newMu + newPhi * xiEst; | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::CwiseBinaryOp, const Eigen::Transpose, -1, 1, false> >, 1, -1, true> >, const Eigen::Block, -1, -1, false>, -1, -1, false>, -1, 1, true> >; Eigen::Index = long int]’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:243:63: required from ‘static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Evaluator&, const Func&, const XprType&) [with XprType = Eigen::CwiseBinaryOp, const Eigen::Transpose, -1, 1, false> >, 1, -1, true> >, const Eigen::Block, -1, -1, false>, -1, -1, false>, -1, 1, true> >; Func = Eigen::internal::scalar_sum_op; Evaluator = Eigen::internal::redux_evaluator, const Eigen::Transpose, -1, 1, false> >, 1, -1, true> >, const Eigen::Block, -1, -1, false>, -1, -1, false>, -1, 1, true> > >; Scalar = double]’ 243 | const Index alignedStart = internal::first_default_aligned(xpr); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseBinaryOp, const Eigen::Transpose, -1, 1, false> >, 1, -1, true> >, const Eigen::Block, -1, -1, false>, -1, -1, false>, -1, 1, true> >; typename Eigen::internal::traits::Scalar = double]’ 418 | return internal::redux_impl::run(thisEval, func, derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseBinaryOp, const Eigen::Transpose, -1, 1, false> >, 1, -1, true> >, const Eigen::Block, -1, -1, false>, -1, -1, false>, -1, 1, true> >; typename Eigen::internal::traits::Scalar = double]’ 463 | return derived().redux(Eigen::internal::scalar_sum_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:50:63: required from ‘static Eigen::internal::dot_nocheck::ResScalar Eigen::internal::dot_nocheck::run(const Eigen::MatrixBase&, const Eigen::MatrixBase&) [with T = Eigen::Block, -1, 1, false> >, 1, -1, true>; U = Eigen::Block, -1, -1, false>, -1, -1, false>, -1, 1, true>; ResScalar = double]’ 50 | return a.transpose().template binaryExpr(b).sum(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:84:58: required from ‘typename Eigen::ScalarBinaryOpTraits::Scalar, typename Eigen::internal::traits::Scalar>::ReturnType Eigen::MatrixBase::dot(const Eigen::MatrixBase&) const [with OtherDerived = Eigen::Block, -1, -1, false>, -1, -1, false>, -1, 1, true>; Derived = Eigen::Block, -1, 1, false> >, 1, -1, true>; typename Eigen::ScalarBinaryOpTraits::Scalar, typename Eigen::internal::traits::Scalar>::ReturnType = double; typename Eigen::internal::traits::Scalar = double; typename Eigen::internal::traits::Scalar = double]’ 84 | return internal::dot_nocheck::run(*this, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:380:62: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/Householder.h:129:19: required from ‘void Eigen::MatrixBase::applyHouseholderOnTheLeft(const EssentialPart&, const Scalar&, Scalar*) [with EssentialPart = Eigen::Block, -1, 1, false>; Derived = Eigen::Block, -1, -1, false>; Scalar = double]’ 129 | tmp.noalias() = essential.adjoint() * bottom; | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:307:42: required from ‘void Eigen::HouseholderSequence::evalTo(Dest&, Workspace&) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 306 | dst.bottomRightCorner(cornerSize, cornerSize) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 | .applyHouseholderOnTheLeft(essentialVector(k), m_coeffs.coeff(k), workspace.data()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:232:56: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 232 | if(svd.m_computeFullV) m_qr.householderQ().evalTo(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 654 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, 1, -1, true> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, 1, -1, true> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1043:41: required from ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >’ 1043 | CoeffReadCost = evaluator::CoeffReadCost, | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:41: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::Block, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false>, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, -1, 1, false> > >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ 739 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8: required from ‘struct Eigen::internal::evaluator, const Eigen::Block, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false>, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, -1, 1, false> > > >’ 722 | struct evaluator > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:357:7: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:92:55: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 92 | if(forward) make_block_householder_triangular_factor(T, vectors, hCoeffs); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:41: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::Block, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false>, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, -1, 1, false> > >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ 739 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8: required from ‘struct Eigen::internal::evaluator, const Eigen::Block, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false>, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, -1, 1, false> > > >’ 722 | struct evaluator > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:357:7: required from ‘class Eigen::internal::redux_evaluator, const Eigen::Block, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false>, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, -1, 1, false> > > >’ 357 | class redux_evaluator : public internal::evaluator<_XprType> | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:414:17: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseBinaryOp, const Eigen::Block, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false>, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, -1, 1, false> > >; typename Eigen::internal::traits::Scalar = double]’ 414 | ThisEvaluator thisEval(derived()); | ^~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25: [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:92:55: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 92 | if(forward) make_block_householder_triangular_factor(T, vectors, hCoeffs); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 0, Eigen::Stride<0, 0> >, -1, 1, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, 0, Eigen::Stride<0, 0> >, -1, 1, false> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:311:41: required from ‘struct Eigen::internal::unary_evaluator, 0, Eigen::Stride<0, 0> >, -1, 1, false> >, Eigen::internal::IndexBased, double>’ 311 | CoeffReadCost = evaluator::CoeffReadCost, | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator, 0, Eigen::Stride<0, 0> >, -1, 1, false> > >’ 90 | struct evaluator : public unary_evaluator | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, 0, Eigen::Stride<0, 0> >, -1, 1, false> > >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:78: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::Block, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false>, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, -1, 1, false> > >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ 739 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:92:55: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 92 | if(forward) make_block_householder_triangular_factor(T, vectors, hCoeffs); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::Matrix > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, Eigen::Matrix > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp, Eigen::Matrix >’ 60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp >::type, internal::no_assignment_operator | ^~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:347:30: required from ‘Derived& Eigen::DenseBase::setConstant(const Scalar&) [with Derived = Eigen::Matrix; Scalar = double]’ 347 | return derived() = Constant(rows(), cols(), val); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:548:10: required from ‘Derived& Eigen::DenseBase::setZero() [with Derived = Eigen::Matrix]’ 548 | return setConstant(Scalar(0)); | ^~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixMatrix.h:151:29: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:99:78: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 99 | VectorsType::MaxColsAtCompileTime,MatrixType::MaxColsAtCompileTime> tmp = V.adjoint() * mat; | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:103:17: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 103 | mat.noalias() -= V * tmp; | ~~~~~~~~~~~~~~^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >, -1, -1, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:774:20: required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, -1, false>, -1, -1, false>; SrcXprType = Eigen::Block, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >, -1, -1, false>; Functor = sub_assign_op]’ 774 | SrcEvaluatorType srcEvaluator(src); | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31: required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, -1, false>, -1, -1, false>; SrcXprType = Eigen::Block, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >, -1, -1, false>; Functor = Eigen::internal::sub_assign_op; Weak = void]’ 954 | call_dense_assignment_loop(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, -1, false>, -1, -1, false>; Src = Eigen::Block, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >, -1, -1, false>; Func = sub_assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:858:27: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block, -1, -1, false>, -1, -1, false>; Src = Eigen::Block, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >, -1, -1, false>; Func = sub_assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 858 | call_assignment_no_alias(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:164:18: required from ‘Derived& Eigen::MatrixBase::operator-=(const Eigen::MatrixBase&) [with OtherDerived = Eigen::Block, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >, -1, -1, false>; Derived = Eigen::Block, -1, -1, false>, -1, -1, false>]’ 164 | call_assignment(derived(), other.derived(), internal::sub_assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixMatrix.h:457:31: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:103:17: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 103 | mat.noalias() -= V * tmp; | ~~~~~~~~~~~~~~^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, -1, false>, -1, -1, true> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, -1, -1, false>, -1, -1, true> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:78: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, false>, -1, -1, true> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ 739 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8: required from ‘struct Eigen::internal::evaluator, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, false>, -1, -1, true> > >’ 722 | struct evaluator > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:774:20: required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, -1, false>, -1, -1, true>; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, false>, -1, -1, true> >; Functor = sub_assign_op]’ 774 | SrcEvaluatorType srcEvaluator(src); | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31: required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, -1, false>, -1, -1, true>; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, false>, -1, -1, true> >; Functor = Eigen::internal::sub_assign_op; Weak = void]’ 954 | call_dense_assignment_loop(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:103:17: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 103 | mat.noalias() -= V * tmp; | ~~~~~~~~~~~~~~^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, -1, false>, -1, -1, true> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:780:20: required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, -1, false>, -1, -1, true>; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, false>, -1, -1, true> >; Functor = sub_assign_op]’ 780 | DstEvaluatorType dstEvaluator(dst); | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31: required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, -1, false>, -1, -1, true>; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, false>, -1, -1, true> >; Functor = Eigen::internal::sub_assign_op; Weak = void]’ 954 | call_dense_assignment_loop(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, -1, false>, -1, -1, true>; Src = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, false>, -1, -1, true> >; Func = sub_assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:858:27: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block, -1, -1, false>, -1, -1, true>; Src = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, false>, -1, -1, true> >; Func = sub_assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 858 | call_assignment_no_alias(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:164:18: required from ‘Derived& Eigen::MatrixBase::operator-=(const Eigen::MatrixBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, false>, -1, -1, true> >; Derived = Eigen::Block, -1, -1, false>, -1, -1, true>]’ 164 | call_assignment(derived(), other.derived(), internal::sub_assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixMatrix.h:462:32: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:103:17: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 103 | mat.noalias() -= V * tmp; | ~~~~~~~~~~~~~~^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::CwiseBinaryOp, const Eigen::Transpose, -1, 1, true>, -1, 1, false> >, 1, -1, true> >, const Eigen::Block, -1, -1, false>, -1, -1, false>, -1, 1, true> >; Eigen::Index = long int]’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:243:63: required from ‘static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Evaluator&, const Func&, const XprType&) [with XprType = Eigen::CwiseBinaryOp, const Eigen::Transpose, -1, 1, true>, -1, 1, false> >, 1, -1, true> >, const Eigen::Block, -1, -1, false>, -1, -1, false>, -1, 1, true> >; Func = Eigen::internal::scalar_sum_op; Evaluator = Eigen::internal::redux_evaluator, const Eigen::Transpose, -1, 1, true>, -1, 1, false> >, 1, -1, true> >, const Eigen::Block, -1, -1, false>, -1, -1, false>, -1, 1, true> > >; Scalar = double]’ 243 | const Index alignedStart = internal::first_default_aligned(xpr); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseBinaryOp, const Eigen::Transpose, -1, 1, true>, -1, 1, false> >, 1, -1, true> >, const Eigen::Block, -1, -1, false>, -1, -1, false>, -1, 1, true> >; typename Eigen::internal::traits::Scalar = double]’ 418 | return internal::redux_impl::run(thisEval, func, derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseBinaryOp, const Eigen::Transpose, -1, 1, true>, -1, 1, false> >, 1, -1, true> >, const Eigen::Block, -1, -1, false>, -1, -1, false>, -1, 1, true> >; typename Eigen::internal::traits::Scalar = double]’ 463 | return derived().redux(Eigen::internal::scalar_sum_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:50:63: required from ‘static Eigen::internal::dot_nocheck::ResScalar Eigen::internal::dot_nocheck::run(const Eigen::MatrixBase&, const Eigen::MatrixBase&) [with T = Eigen::Block, -1, 1, true>, -1, 1, false> >, 1, -1, true>; U = Eigen::Block, -1, -1, false>, -1, -1, false>, -1, 1, true>; ResScalar = double]’ 50 | return a.transpose().template binaryExpr(b).sum(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:84:58: required from ‘typename Eigen::ScalarBinaryOpTraits::Scalar, typename Eigen::internal::traits::Scalar>::ReturnType Eigen::MatrixBase::dot(const Eigen::MatrixBase&) const [with OtherDerived = Eigen::Block, -1, -1, false>, -1, -1, false>, -1, 1, true>; Derived = Eigen::Block, -1, 1, true>, -1, 1, false> >, 1, -1, true>; typename Eigen::ScalarBinaryOpTraits::Scalar, typename Eigen::internal::traits::Scalar>::ReturnType = double; typename Eigen::internal::traits::Scalar = double; typename Eigen::internal::traits::Scalar = double]’ 84 | return internal::dot_nocheck::run(*this, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:380:62: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/QR/ColPivHouseholderQR.h:550:35: required from ‘void Eigen::ColPivHouseholderQR::computeInPlace() [with _MatrixType = Eigen::Matrix]’ 549 | m_qr.bottomRightCorner(rows-k, cols-k-1) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 550 | .applyHouseholderOnTheLeft(m_qr.col(k).tail(rows-k-1), m_hCoeffs.coeffRef(k), &m_temp.coeffRef(k+1)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/QR/ColPivHouseholderQR.h:477:3: required from ‘Eigen::ColPivHouseholderQR<_MatrixType>& Eigen::ColPivHouseholderQR::compute(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix]’ 477 | computeInPlace(); | ^~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:229:19: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 229 | m_qr.compute(m_adjoint); | ~~~~~~~~~~~~^~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 654 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, -1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, -1, -1, false>, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, -1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, -1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, -1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, -1, -1, false, true>’ 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:101:19: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 101 | if(forward) tmp = T.template triangularView() * tmp; | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, false> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, false>, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, false> >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixMatrix.h:462:59: required from ‘static void Eigen::internal::triangular_product_impl::run(Dest&, const Lhs&, const Rhs&, const typename Dest::Scalar&) [with Dest = Eigen::Matrix; int Mode = 2; bool LhsIsTriangular = true; Lhs = Eigen::Matrix; Rhs = Eigen::Matrix; typename Dest::Scalar = double]’ 462 | dst.leftCols(diagSize) -= (rhs_alpha-RhsScalar(1))*a_lhs.leftCols(diagSize); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:770:14: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:101:19: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 101 | if(forward) tmp = T.template triangularView() * tmp; | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase >, -1, -1, true>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase >, -1, -1, true>, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >, -1, -1, true> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >, -1, -1, true> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase >, -1, -1, true>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense >, -1, -1, true, true>’ 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:102:19: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 102 | else tmp = T.template triangularView().adjoint() * tmp; | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block >, -1, -1, true> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block >, -1, -1, true> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block >, -1, -1, true> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block >, -1, -1, true>, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block >, -1, -1, true> >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixMatrix.h:462:59: required from ‘static void Eigen::internal::triangular_product_impl::run(Dest&, const Lhs&, const Rhs&, const typename Dest::Scalar&) [with Dest = Eigen::Matrix; int Mode = 1; bool LhsIsTriangular = true; Lhs = const Eigen::Transpose >; Rhs = Eigen::Matrix; typename Dest::Scalar = double]’ 462 | dst.leftCols(diagSize) -= (rhs_alpha-RhsScalar(1))*a_lhs.leftCols(diagSize); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:770:14: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:102:19: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 102 | else tmp = T.template triangularView().adjoint() * tmp; | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, false>, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, 1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, 1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, -1, 1, false, true>’ 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:42:58: required from here 42 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, false> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, false>, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, false> >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:606:52: required from ‘const Eigen::internal::product_evaluator, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::CoeffReturnType Eigen::internal::product_evaluator, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::coeff(Eigen::Index, Eigen::Index) const [with Lhs = Eigen::Matrix; Rhs = Eigen::Solve, 1>, Eigen::Transpose > >; int ProductTag = 8; typename Eigen::internal::traits::Lhs>::Scalar = double; typename Eigen::Product::Lhs = Eigen::Matrix; typename Eigen::internal::traits::Rhs>::Scalar = double; typename Eigen::Product::Rhs = Eigen::Solve, 1>, Eigen::Transpose > >; CoeffReturnType = double; Eigen::Index = long int]’ 606 | return (m_lhs.row(row).transpose().cwiseProduct( m_rhs.col(col) )).sum(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:769:69: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:42:58: required from here 42 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::Transpose >, 2>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::Transpose >, 2> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, Eigen::Transpose >, 2> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base, Eigen::Transpose >, 2, 8>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl, Eigen::Transpose >, 2, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, Eigen::Transpose >, 2>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:577:26: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:42:58: required from here 42 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, 0>, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Diagonal.h:63:53: required from ‘class Eigen::Diagonal, 0>’ 63 | template class Diagonal | ^~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:587:61: required from ‘void Eigen::LDLT::_solve_impl_transposed(const RhsType&, DstType&) const [with bool Conjugate = true; RhsType = Eigen::Transpose >; DstType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 587 | const typename Diagonal::RealReturnType vecD(vectorD()); | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:569:31: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:42:58: required from here 42 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase > >, Eigen::Matrix, 2>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase > >, Eigen::Matrix, 2> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase > >, Eigen::Matrix, 2> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base > >, Eigen::Matrix, 2, 8>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl > >, Eigen::Matrix, 2, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product > >, Eigen::Matrix, 2>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:610:38: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:42:58: required from here 42 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, 1, true>, -1, 1, true> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, -1, 1, true>, -1, 1, true> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:78: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, 1, -1, false> >, const Eigen::Block, -1, 1, true>, -1, 1, true> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ 739 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8: required from ‘struct Eigen::internal::evaluator, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, 1, -1, false> >, const Eigen::Block, -1, 1, true>, -1, 1, true> > >’ 722 | struct evaluator > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:357:7: required from ‘class Eigen::internal::redux_evaluator, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, 1, -1, false> >, const Eigen::Block, -1, 1, true>, -1, 1, true> > >’ 357 | class redux_evaluator : public internal::evaluator<_XprType> | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:414:17: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseBinaryOp, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, 1, -1, false> >, const Eigen::Block, -1, 1, true>, -1, 1, true> >; typename Eigen::internal::traits::Scalar = double]’ 414 | ThisEvaluator thisEval(derived()); | ^~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:44:30: required from here 44 | fittedY = newMu + newPhi * xiEst; | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 0, Eigen::Stride<0, 0> >, 1, -1, false>, 1, -1, true> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, 0, Eigen::Stride<0, 0> >, 1, -1, false>, 1, -1, true> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:311:41: required from ‘struct Eigen::internal::unary_evaluator, 0, Eigen::Stride<0, 0> >, 1, -1, false>, 1, -1, true> >, Eigen::internal::IndexBased, double>’ 311 | CoeffReadCost = evaluator::CoeffReadCost, | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator, 0, Eigen::Stride<0, 0> >, 1, -1, false>, 1, -1, true> > >’ 90 | struct evaluator : public unary_evaluator | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, 0, Eigen::Stride<0, 0> >, 1, -1, false>, 1, -1, true> > >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:41: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, 1, -1, false>, 1, -1, true> >, const Eigen::Block, -1, 1, true> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ 739 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8: [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:44:30: required from here 44 | fittedY = newMu + newPhi * xiEst; | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::CwiseBinaryOp, const Eigen::Block, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false>, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, -1, 1, false> > >; Eigen::Index = long int]’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:243:63: required from ‘static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Evaluator&, const Func&, const XprType&) [with XprType = Eigen::CwiseBinaryOp, const Eigen::Block, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false>, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, -1, 1, false> > >; Func = Eigen::internal::scalar_sum_op; Evaluator = Eigen::internal::redux_evaluator, const Eigen::Block, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false>, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, -1, 1, false> > > >; Scalar = double]’ 243 | const Index alignedStart = internal::first_default_aligned(xpr); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseBinaryOp, const Eigen::Block, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false>, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, -1, 1, false> > >; typename Eigen::internal::traits::Scalar = double]’ 418 | return internal::redux_impl::run(thisEval, func, derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseBinaryOp, const Eigen::Block, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false>, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, -1, 1, false> > >; typename Eigen::internal::traits::Scalar = double]’ 463 | return derived().redux(Eigen::internal::scalar_sum_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixVector.h:137:114: required from ‘static void Eigen::internal::triangular_matrix_vector_product::run(Index, Index, const LhsScalar*, Index, const RhsScalar*, Index, ResScalar*, Index, const ResScalar&) [with Index = long int; int Mode = 6; LhsScalar = double; bool ConjLhs = false; RhsScalar = double; bool ConjRhs = false; int Version = 0; ResScalar = double]’ 137 | res.coeffRef(i) += alpha * (cjLhs.row(i).segment(s,r).cwiseProduct(cjRhs.segment(s,r).transpose())).sum(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixVector.h:332:12: required from ‘static void Eigen::internal::trmv_selector::run(const Lhs&, const Rhs&, Dest&, const typename Dest::Scalar&) [with Lhs = Eigen::Transpose, -1, -1, false>, -1, -1, false> >; Rhs = Eigen::Transpose, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose, -1, -1, false>, -1, 1, true>, -1, 1, false> > > >; Dest = Eigen::Transpose, 1, -1, true>, 1, -1, false> >; int Mode = 6; typename Dest::Scalar = double]’ 327 | internal::triangular_matrix_vector_product | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 | | ~~~~~~~~~ 332 | ::run(actualLhs.rows(),actualLhs.cols(), | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 | actualLhs.data(),actualLhs.outerStride(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 | actualRhsPtr,1, | ~~~~~~~~~~~~~~~ 335 | dest.data(),dest.innerStride(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 | actualAlpha); | ~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixVector.h:194:18: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:92:55: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 92 | if(forward) make_block_householder_triangular_factor(T, vectors, hCoeffs); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 654 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, -1, false>, -1, 1, true> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, -1, -1, false>, -1, 1, true> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1043:41: required from ‘struct Eigen::internal::evaluator, -1, -1, false>, -1, 1, true>, -1, 1, false> >’ 1043 | CoeffReadCost = evaluator::CoeffReadCost, | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, -1, -1, false>, -1, 1, true>, -1, 1, false> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:311:41: required from ‘struct Eigen::internal::unary_evaluator, -1, -1, false>, -1, 1, true>, -1, 1, false> >, Eigen::internal::IndexBased, double>’ 311 | CoeffReadCost = evaluator::CoeffReadCost, | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator, -1, -1, false>, -1, 1, true>, -1, 1, false> > >’ 90 | struct evaluator : public unary_evaluator | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: [ skipping 27 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:92:55: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 92 | if(forward) make_block_householder_triangular_factor(T, vectors, hCoeffs); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, -1, false>, -1, 1, true>, -1, 1, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, -1, -1, false>, -1, 1, true>, -1, 1, false> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:311:41: required from ‘struct Eigen::internal::unary_evaluator, -1, -1, false>, -1, 1, true>, -1, 1, false> >, Eigen::internal::IndexBased, double>’ 311 | CoeffReadCost = evaluator::CoeffReadCost, | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator, -1, -1, false>, -1, 1, true>, -1, 1, false> > >’ 90 | struct evaluator : public unary_evaluator | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, -1, -1, false>, -1, 1, true>, -1, 1, false> > >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:78: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose, -1, -1, false>, -1, 1, true>, -1, 1, false> > >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ 739 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8: [ skipping 25 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:92:55: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 92 | if(forward) make_block_householder_triangular_factor(T, vectors, hCoeffs); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose, -1, -1, false>, -1, 1, true>, -1, 1, false> > > >, -1, 1, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose, -1, -1, false>, -1, 1, true>, -1, 1, false> > > >, -1, 1, false> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:78: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose, -1, -1, false>, -1, 1, true>, -1, 1, false> > > >, -1, 1, false> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ 739 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8: required from ‘struct Eigen::internal::evaluator, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose, -1, -1, false>, -1, 1, true>, -1, 1, false> > > >, -1, 1, false> > >’ 722 | struct evaluator > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:774:20: required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, 1, -1, true>, 1, -1, false> >, -1, 1, false>; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose, -1, -1, false>, -1, 1, true>, -1, 1, false> > > >, -1, 1, false> >; Functor = sub_assign_op]’ 774 | SrcEvaluatorType srcEvaluator(src); | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31: required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, 1, -1, true>, 1, -1, false> >, -1, 1, false>; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose, -1, -1, false>, -1, 1, true>, -1, 1, false> > > >, -1, 1, false> >; Functor = Eigen::internal::sub_assign_op; Weak = void]’ 954 | call_dense_assignment_loop(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:92:55: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 92 | if(forward) make_block_householder_triangular_factor(T, vectors, hCoeffs); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 1, -1, true>, 1, -1, false> >, -1, 1, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:780:20: required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, 1, -1, true>, 1, -1, false> >, -1, 1, false>; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose, -1, -1, false>, -1, 1, true>, -1, 1, false> > > >, -1, 1, false> >; Functor = sub_assign_op]’ 780 | DstEvaluatorType dstEvaluator(dst); | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31: required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, 1, -1, true>, 1, -1, false> >, -1, 1, false>; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose, -1, -1, false>, -1, 1, true>, -1, 1, false> > > >, -1, 1, false> >; Functor = Eigen::internal::sub_assign_op; Weak = void]’ 954 | call_dense_assignment_loop(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, 1, -1, true>, 1, -1, false> >, -1, 1, false>; Src = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose, -1, -1, false>, -1, 1, true>, -1, 1, false> > > >, -1, 1, false> >; Func = sub_assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:858:27: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block, 1, -1, true>, 1, -1, false> >, -1, 1, false>; Src = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose, -1, -1, false>, -1, 1, true>, -1, 1, false> > > >, -1, 1, false> >; Func = sub_assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 858 | call_assignment_no_alias(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:164:18: required from ‘Derived& Eigen::MatrixBase::operator-=(const Eigen::MatrixBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose, -1, -1, false>, -1, 1, true>, -1, 1, false> > > >, -1, 1, false> >; Derived = Eigen::Block, 1, -1, true>, 1, -1, false> >, -1, 1, false>]’ 164 | call_assignment(derived(), other.derived(), internal::sub_assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixVector.h:341:27: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:92:55: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 92 | if(forward) make_block_householder_triangular_factor(T, vectors, hCoeffs); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, false> >, -1, -1, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:774:20: required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, -1, false>; SrcXprType = Eigen::Block, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, false> >, -1, -1, false>; Functor = sub_assign_op]’ 774 | SrcEvaluatorType srcEvaluator(src); | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31: required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, -1, false>; SrcXprType = Eigen::Block, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, false> >, -1, -1, false>; Functor = Eigen::internal::sub_assign_op; Weak = void]’ 954 | call_dense_assignment_loop(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, -1, false>; Src = Eigen::Block, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, false> >, -1, -1, false>; Func = sub_assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:858:27: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block, -1, -1, false>; Src = Eigen::Block, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, false> >, -1, -1, false>; Func = sub_assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 858 | call_assignment_no_alias(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:164:18: required from ‘Derived& Eigen::MatrixBase::operator-=(const Eigen::MatrixBase&) [with OtherDerived = Eigen::Block, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, false> >, -1, -1, false>; Derived = Eigen::Block, -1, -1, false>]’ 164 | call_assignment(derived(), other.derived(), internal::sub_assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixMatrix.h:457:31: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:99:78: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 99 | VectorsType::MaxColsAtCompileTime,MatrixType::MaxColsAtCompileTime> tmp = V.adjoint() * mat; | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, -1, false> >, -1, -1, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, -1, -1, false> >, -1, -1, false> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:78: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, false> >, -1, -1, false> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ 739 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8: required from ‘struct Eigen::internal::evaluator, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, false> >, -1, -1, false> > >’ 722 | struct evaluator > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:774:20: required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, -1, true>; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, false> >, -1, -1, false> >; Functor = sub_assign_op]’ 774 | SrcEvaluatorType srcEvaluator(src); | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31: required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, -1, true>; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, false> >, -1, -1, false> >; Functor = Eigen::internal::sub_assign_op; Weak = void]’ 954 | call_dense_assignment_loop(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:99:78: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 99 | VectorsType::MaxColsAtCompileTime,MatrixType::MaxColsAtCompileTime> tmp = V.adjoint() * mat; | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, -1, true> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:780:20: required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, -1, true>; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, false> >, -1, -1, false> >; Functor = sub_assign_op]’ 780 | DstEvaluatorType dstEvaluator(dst); | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31: required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, -1, true>; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, false> >, -1, -1, false> >; Functor = Eigen::internal::sub_assign_op; Weak = void]’ 954 | call_dense_assignment_loop(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, -1, true>; Src = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, false> >, -1, -1, false> >; Func = sub_assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:858:27: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block, -1, -1, true>; Src = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, false> >, -1, -1, false> >; Func = sub_assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 858 | call_assignment_no_alias(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:164:18: required from ‘Derived& Eigen::MatrixBase::operator-=(const Eigen::MatrixBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, false> >, -1, -1, false> >; Derived = Eigen::Block, -1, -1, true>]’ 164 | call_assignment(derived(), other.derived(), internal::sub_assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixMatrix.h:462:32: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:99:78: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 99 | VectorsType::MaxColsAtCompileTime,MatrixType::MaxColsAtCompileTime> tmp = V.adjoint() * mat; | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, 2>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, 2> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, 2> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, 2, 7>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, 2, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, 2>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:577:26: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:41:51: required from here 41 | xiEst = LamPhi * ldlt_SigmaYi.solve(yVec - muVec) ;// LamPhiSig * (yVec - muVec); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase > >, Eigen::Matrix, 2>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase > >, Eigen::Matrix, 2> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase > >, Eigen::Matrix, 2> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base > >, Eigen::Matrix, 2, 7>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl > >, Eigen::Matrix, 2, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product > >, Eigen::Matrix, 2>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:610:38: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:41:51: required from here 41 | xiEst = LamPhi * ldlt_SigmaYi.solve(yVec - muVec) ;// LamPhiSig * (yVec - muVec); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, 1, -1, false> >, const Eigen::Block, -1, 1, true> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, 1, -1, false> >, const Eigen::Block, -1, 1, true> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, 1, -1, false> >, const Eigen::Block, -1, 1, true> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, 1, -1, false> >, const Eigen::Block, -1, 1, true>, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, 1, -1, false> >, const Eigen::Block, -1, 1, true> >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:606:52: required from ‘const Eigen::internal::product_evaluator, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::CoeffReturnType Eigen::internal::product_evaluator, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::coeff(Eigen::Index, Eigen::Index) const [with Lhs = Eigen::Map, 0, Eigen::Stride<0, 0> >; Rhs = Eigen::Matrix; int ProductTag = 8; typename Eigen::internal::traits::Lhs>::Scalar = double; typename Eigen::Product::Lhs = Eigen::Map, 0, Eigen::Stride<0, 0> >; typename Eigen::internal::traits::Rhs>::Scalar = double; typename Eigen::Product::Rhs = Eigen::Matrix; CoeffReturnType = double; Eigen::Index = long int]’ 606 | return (m_lhs.row(row).transpose().cwiseProduct( m_rhs.col(col) )).sum(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:654:63: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:44:30: required from here 44 | fittedY = newMu + newPhi * xiEst; | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::Matrix > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, Eigen::Matrix > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp, Eigen::Matrix >’ 60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp >::type, internal::no_assignment_operator | ^~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/SelfCwiseBinaryOp.h:41:67: required from ‘Derived& Eigen::DenseBase::operator/=(const Scalar&) [with Derived = Eigen::Block, 1, 1, false>; Scalar = double]’ 41 | internal::call_assignment(this->derived(), PlainObject::Constant(rows(),cols(),other), internal::div_assign_op()); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:599:18: required from ‘void Eigen::LDLT::_solve_impl_transposed(const RhsType&, DstType&) const [with bool Conjugate = true; RhsType = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >; DstType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 599 | dst.row(i) /= vecD(i); | ~~~~~~~~~~~^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:569:31: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:41:51: required from here 41 | xiEst = LamPhi * ldlt_SigmaYi.solve(yVec - muVec) ;// LamPhiSig * (yVec - muVec); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, 1, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, -1, 1, false> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:78: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, false> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ 739 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8: required from ‘struct Eigen::internal::evaluator, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, false> > >’ 722 | struct evaluator > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:357:7: required from ‘class Eigen::internal::redux_evaluator, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, false> > >’ 357 | class redux_evaluator : public internal::evaluator<_XprType> | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:414:17: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseBinaryOp, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, false> >; typename Eigen::internal::traits::Scalar = double]’ 414 | ThisEvaluator thisEval(derived()); | ^~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:42:58: required from here 42 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, 1, true> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:780:20: required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, 1, true>; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 2, Eigen::Stride<0, 0> > >; Functor = add_assign_op]’ 780 | DstEvaluatorType dstEvaluator(dst); | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31: required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, 1, true>; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 2, Eigen::Stride<0, 0> > >; Functor = Eigen::internal::add_assign_op; Weak = void]’ 954 | call_dense_assignment_loop(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, 1, true>; Src = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 2, Eigen::Stride<0, 0> > >; Func = add_assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:858:27: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block, -1, 1, true>; Src = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 2, Eigen::Stride<0, 0> > >; Func = add_assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 858 | call_assignment_no_alias(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:177:18: required from ‘Derived& Eigen::MatrixBase::operator+=(const Eigen::MatrixBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 2, Eigen::Stride<0, 0> > >; Derived = Eigen::Block, -1, 1, true>]’ 177 | call_assignment(derived(), other.derived(), internal::add_assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:296:25: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:44:30: required from here 44 | fittedY = newMu + newPhi * xiEst; | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, -1, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, -1, -1, false> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:78: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, false> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ 739 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8: required from ‘struct Eigen::internal::evaluator, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, false> > >’ 722 | struct evaluator > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:774:20: required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, -1, true>; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, false> >; Functor = sub_assign_op]’ 774 | SrcEvaluatorType srcEvaluator(src); | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31: required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, -1, true>; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, -1, -1, false> >; Functor = Eigen::internal::sub_assign_op; Weak = void]’ 954 | call_dense_assignment_loop(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: [ skipping 16 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:101:19: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 101 | if(forward) tmp = T.template triangularView() * tmp; | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator >, -1, -1, true> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator >, -1, -1, true> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:78: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block >, -1, -1, true> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ 739 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8: required from ‘struct Eigen::internal::evaluator, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block >, -1, -1, true> > >’ 722 | struct evaluator > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:774:20: required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, -1, true>; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block >, -1, -1, true> >; Functor = sub_assign_op]’ 774 | SrcEvaluatorType srcEvaluator(src); | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31: required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, -1, true>; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block >, -1, -1, true> >; Functor = Eigen::internal::sub_assign_op; Weak = void]’ 954 | call_dense_assignment_loop(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: [ skipping 16 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/BlockHouseholder.h:102:19: required from ‘void Eigen::internal::apply_block_householder_on_the_left(MatrixType&, const VectorsType&, const CoeffsType&, bool) [with MatrixType = Eigen::Block, -1, -1, false>; VectorsType = Eigen::Block, -1, -1, false>; CoeffsType = Eigen::VectorBlock, -1>]’ 102 | else tmp = T.template triangularView().adjoint() * tmp; | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:46: required from ‘void Eigen::HouseholderSequence::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix; Workspace = Eigen::Matrix; VectorsType = Eigen::Matrix; CoeffsType = Eigen::Matrix; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:236:47: required from ‘bool Eigen::internal::qr_preconditioner_impl::run(Eigen::JacobiSVD&, const MatrixType&) [with MatrixType = Eigen::Matrix]’ 236 | m_qr.householderQ().applyThisOnTheLeft(svd.m_matrixV, m_workspace); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD& Eigen::JacobiSVD::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix; int QRPreconditioner = 2; MatrixType = Eigen::Matrix]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GetIndCEScoresCPPnewInd.cpp:12:90: required from here 12 | Eigen::JacobiSVD svdMat(Mat, Eigen::ComputeThinU | Eigen::ComputeThinV); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::OuterStride<> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::OuterStride<> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::OuterStride<> >, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map, 0, Eigen::OuterStride<> >’ 94 | template class Map | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularSolverVector.h:97:18: [ skipping 18 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:41:51: required from here 41 | xiEst = LamPhi * ldlt_SigmaYi.solve(yVec - muVec) ;// LamPhiSig * (yVec - muVec); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, -1, 1, true>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, -1, 1, true>, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::OuterStride<> >, -1, 1, true> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::OuterStride<> >, -1, 1, true> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::OuterStride<> >, -1, 1, true>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, 0, Eigen::OuterStride<> >, -1, 1, true, true>’ 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 20 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:41:51: required from here 41 | xiEst = LamPhi * ldlt_SigmaYi.solve(yVec - muVec) ;// LamPhiSig * (yVec - muVec); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false>, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false, true>’ 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 21 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:41:51: required from here 41 | xiEst = LamPhi * ldlt_SigmaYi.solve(yVec - muVec) ;// LamPhiSig * (yVec - muVec); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false>, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularSolverVector.h:125:66: required from ‘static void Eigen::internal::triangular_solve_vector::run(Index, const LhsScalar*, Index, RhsScalar*) [with LhsScalar = double; RhsScalar = double; Index = long int; int Mode = 5; bool Conjugate = false]’ 125 | Map >(rhs+s,r) -= rhs[i] * cjLhs.col(i).segment(s,r); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:73:12: [ skipping 17 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:41:51: required from here 41 | xiEst = LamPhi * ldlt_SigmaYi.solve(yVec - muVec) ;// LamPhiSig * (yVec - muVec); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false>, Eigen::Dense>’ 118 | template class TransposeImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >’ 52 | template class Transpose | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularSolverVector.h:78:57: [ skipping 18 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:41:51: required from here 41 | xiEst = LamPhi * ldlt_SigmaYi.solve(yVec - muVec) ;// LamPhiSig * (yVec - muVec); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, const Eigen::Map, 0, Eigen::Stride<0, 0> >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularSolverVector.h:78:72: required from ‘static void Eigen::internal::triangular_solve_vector::run(Index, const LhsScalar*, Index, RhsScalar*) [with LhsScalar = double; RhsScalar = double; Index = long int; int Mode = 6; bool Conjugate = false]’ 78 | rhs[i] -= (cjLhs.row(i).segment(s,k).transpose().cwiseProduct(Map >(rhs+s,k))).sum(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:73:12: [ skipping 17 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:41:51: required from here 41 | xiEst = LamPhi * ldlt_SigmaYi.solve(yVec - muVec) ;// LamPhiSig * (yVec - muVec); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of ‘struct Eigen::internal::gemm_pack_rhs, 4, 1, false, true>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularSolverMatrix.h:233:85: required from ‘static void Eigen::internal::triangular_solve_matrix::run(Index, Index, const Scalar*, Index, Scalar*, Index, Index, Eigen::internal::level3_blocking&) [with Scalar = double; Index = long int; int Mode = 6; bool Conjugate = false; int TriStorageOrder = 1; int OtherInnerStride = 1]’ 233 | gemm_pack_rhs pack_rhs_panel; | ^~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularSolverMatrix.h:32:12: required from ‘static void Eigen::internal::triangular_solve_matrix::run(Index, Index, const Scalar*, Index, Scalar*, Index, Index, Eigen::internal::level3_blocking&) [with Scalar = double; Index = long int; int Side = 1; int Mode = 5; bool Conjugate = false; int TriStorageOrder = 0; int OtherInnerStride = 1]’ 27 | triangular_solve_matrix< | ~~~~~~~~~~~~~~~~~~~~~~~~ 28 | Scalar, Index, Side==OnTheLeft?OnTheRight:OnTheLeft, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 29 | (Mode&UnitDiag) | ((Mode&Upper) ? Lower : Upper), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 30 | NumTraits::IsComplex && Conjugate, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | TriStorageOrder==RowMajor ? ColMajor : RowMajor, ColMajor, OtherInnerStride> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | ::run(size, cols, tri, triStride, _other, otherIncr, otherStride, blocking); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:102:12: required from ‘static void Eigen::internal::triangular_solver_selector::run(const Lhs&, Rhs&) [with Lhs = const Eigen::Matrix; Rhs = Eigen::Matrix; int Side = 1; int Mode = 5]’ 100 | triangular_solve_matrix | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 | ::run(size, othersize, &actualLhs.coeffRef(0,0), actualLhs.outerStride(), &rhs.coeffRef(0,0), rhs.innerStride(), rhs.outerStride(), blocking); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:182:21: required from ‘void Eigen::TriangularViewImpl<_MatrixType, _Mode, Eigen::Dense>::solveInPlace(const Eigen::MatrixBase&) const [with int Side = 1; OtherDerived = Eigen::Matrix; _MatrixType = const Eigen::Matrix; unsigned int _Mode = 5]’ 181 | internal::triangular_solver_selector::type, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 | Side, Mode>::run(derived().nestedExpression(), otherCopy); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/TriangularMatrix.h:522:37: required from ‘void Eigen::TriangularViewImpl<_MatrixType, _Mode, Eigen::Dense>::solveInPlace(const Eigen::MatrixBase&) const [with OtherDerived = Eigen::Matrix; _MatrixType = const Eigen::Matrix; unsigned int _Mode = 5]’ 522 | { return solveInPlace(other); } | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:581:60: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:42:58: required from here 42 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2504:50: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 2504 | typedef typename unpacket_traits::half HalfPacket; | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2505:82: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 2505 | typedef typename unpacket_traits::half>::half QuarterPacket; | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2505:82: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2508:56: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 2508 | HalfPacketSize = unpacket_traits::size, | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2508:56: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2509:70: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 2509 | QuarterPacketSize = unpacket_traits::size}; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2509:70: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2509:70: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 1, 1, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:780:20: required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, 1, 1, false>; SrcXprType = Eigen::CwiseNullaryOp, Eigen::Matrix >; Functor = div_assign_op]’ 780 | DstEvaluatorType dstEvaluator(dst); | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31: required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, 1, 1, false>; SrcXprType = Eigen::CwiseNullaryOp, Eigen::Matrix >; Functor = Eigen::internal::div_assign_op; Weak = void]’ 954 | call_dense_assignment_loop(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, 1, 1, false>; Src = Eigen::CwiseNullaryOp, Eigen::Matrix >; Func = div_assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:858:27: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block, 1, 1, false>; Src = Eigen::CwiseNullaryOp, Eigen::Matrix >; Func = div_assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 858 | call_assignment_no_alias(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/SelfCwiseBinaryOp.h:41:28: required from ‘Derived& Eigen::DenseBase::operator/=(const Scalar&) [with Derived = Eigen::Block, 1, 1, false>; Scalar = double]’ 41 | internal::call_assignment(this->derived(), PlainObject::Constant(rows(),cols(),other), internal::div_assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:599:18: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:41:51: required from here 41 | xiEst = LamPhi * ldlt_SigmaYi.solve(yVec - muVec) ;// LamPhiSig * (yVec - muVec); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of ‘void Eigen::internal::gemm_pack_lhs::operator()(Scalar*, const DataMapper&, Index, Index, Index, Index) [with Scalar = double; Index = long int; DataMapper = Eigen::internal::blas_data_mapper; int Pack1 = 4; int Pack2 = 2; Packet = __vector(2) double; bool Conjugate = false; bool PanelMode = true]’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularSolverMatrix.h:319:27: required from ‘static void Eigen::internal::triangular_solve_matrix::run(Index, Index, const Scalar*, Index, Scalar*, Index, Index, Eigen::internal::level3_blocking&) [with Scalar = double; Index = long int; int Mode = 6; bool Conjugate = false; int TriStorageOrder = 1; int OtherInnerStride = 1]’ 319 | pack_lhs_panel(blockA, lhs.getSubMapper(i2,absolute_j2), | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 | actualPanelWidth, actual_mc, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 | actual_kc, j2); | ~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularSolverMatrix.h:32:12: required from ‘static void Eigen::internal::triangular_solve_matrix::run(Index, Index, const Scalar*, Index, Scalar*, Index, Index, Eigen::internal::level3_blocking&) [with Scalar = double; Index = long int; int Side = 1; int Mode = 5; bool Conjugate = false; int TriStorageOrder = 0; int OtherInnerStride = 1]’ 27 | triangular_solve_matrix< | ~~~~~~~~~~~~~~~~~~~~~~~~ 28 | Scalar, Index, Side==OnTheLeft?OnTheRight:OnTheLeft, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 29 | (Mode&UnitDiag) | ((Mode&Upper) ? Lower : Upper), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 30 | NumTraits::IsComplex && Conjugate, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | TriStorageOrder==RowMajor ? ColMajor : RowMajor, ColMajor, OtherInnerStride> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | ::run(size, cols, tri, triStride, _other, otherIncr, otherStride, blocking); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:102:12: required from ‘static void Eigen::internal::triangular_solver_selector::run(const Lhs&, Rhs&) [with Lhs = const Eigen::Matrix; Rhs = Eigen::Matrix; int Side = 1; int Mode = 5]’ 100 | triangular_solve_matrix | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 | ::run(size, othersize, &actualLhs.coeffRef(0,0), actualLhs.outerStride(), &rhs.coeffRef(0,0), rhs.innerStride(), rhs.outerStride(), blocking); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:182:21: required from ‘void Eigen::TriangularViewImpl<_MatrixType, _Mode, Eigen::Dense>::solveInPlace(const Eigen::MatrixBase&) const [with int Side = 1; OtherDerived = Eigen::Matrix; _MatrixType = const Eigen::Matrix; unsigned int _Mode = 5]’ 181 | internal::triangular_solver_selector::type, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 | Side, Mode>::run(derived().nestedExpression(), otherCopy); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/TriangularMatrix.h:522:37: required from ‘void Eigen::TriangularViewImpl<_MatrixType, _Mode, Eigen::Dense>::solveInPlace(const Eigen::MatrixBase&) const [with OtherDerived = Eigen::Matrix; _MatrixType = const Eigen::Matrix; unsigned int _Mode = 5]’ 522 | { return solveInPlace(other); } | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:581:60: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:42:58: required from here 42 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2100:82: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 2100 | typedef typename unpacket_traits::half>::half QuarterPacket; | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2102:56: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 2102 | HalfPacketSize = unpacket_traits::size, | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2103:62: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 2103 | QuarterPacketSize = unpacket_traits::size, | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2103:62: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of ‘void Eigen::internal::gemm_pack_rhs::operator()(Scalar*, const DataMapper&, Index, Index, Index, Index) [with Scalar = double; Index = long int; DataMapper = Eigen::internal::const_blas_data_mapper; int nr = 4; bool Conjugate = false; bool PanelMode = true]’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularSolverMatrix.h:260:25: required from ‘static void Eigen::internal::triangular_solve_matrix::run(Index, Index, const Scalar*, Index, Scalar*, Index, Index, Eigen::internal::level3_blocking&) [with Scalar = double; Index = long int; int Mode = 5; bool Conjugate = false; int TriStorageOrder = 0; int OtherInnerStride = 1]’ 260 | pack_rhs_panel(blockB+j2*actual_kc, | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ 261 | rhs.getSubMapper(actual_k2+panelOffset, actual_j2), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 | panelLength, actualPanelWidth, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 | actual_kc, panelOffset); | ~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularSolverMatrix.h:32:12: required from ‘static void Eigen::internal::triangular_solve_matrix::run(Index, Index, const Scalar*, Index, Scalar*, Index, Index, Eigen::internal::level3_blocking&) [with Scalar = double; Index = long int; int Side = 1; int Mode = 6; bool Conjugate = false; int TriStorageOrder = 1; int OtherInnerStride = 1]’ 27 | triangular_solve_matrix< | ~~~~~~~~~~~~~~~~~~~~~~~~ 28 | Scalar, Index, Side==OnTheLeft?OnTheRight:OnTheLeft, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 29 | (Mode&UnitDiag) | ((Mode&Upper) ? Lower : Upper), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 30 | NumTraits::IsComplex && Conjugate, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | TriStorageOrder==RowMajor ? ColMajor : RowMajor, ColMajor, OtherInnerStride> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | ::run(size, cols, tri, triStride, _other, otherIncr, otherStride, blocking); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:102:12: required from ‘static void Eigen::internal::triangular_solver_selector::run(const Lhs&, Rhs&) [with Lhs = const Eigen::Transpose >; Rhs = Eigen::Matrix; int Side = 1; int Mode = 6]’ 100 | triangular_solve_matrix | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 | ::run(size, othersize, &actualLhs.coeffRef(0,0), actualLhs.outerStride(), &rhs.coeffRef(0,0), rhs.innerStride(), rhs.outerStride(), blocking); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:182:21: required from ‘void Eigen::TriangularViewImpl<_MatrixType, _Mode, Eigen::Dense>::solveInPlace(const Eigen::MatrixBase&) const [with int Side = 1; OtherDerived = Eigen::Matrix; _MatrixType = const Eigen::Transpose >; unsigned int _Mode = 6]’ 181 | internal::triangular_solver_selector::type, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 | Side, Mode>::run(derived().nestedExpression(), otherCopy); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/TriangularMatrix.h:522:37: required from ‘void Eigen::TriangularViewImpl<_MatrixType, _Mode, Eigen::Dense>::solveInPlace(const Eigen::MatrixBase&) const [with OtherDerived = Eigen::Matrix; _MatrixType = const Eigen::Transpose >; unsigned int _Mode = 6]’ 522 | { return solveInPlace(other); } | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:606:71: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:42:58: required from here 42 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2459:62: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 2459 | PacketBlock kernel; | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, false>, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, false>, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, 1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, 1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 25 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:42:58: required from here 42 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::CwiseBinaryOp, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >; Eigen::Index = long int]’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:243:63: required from ‘static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Evaluator&, const Func&, const XprType&) [with XprType = Eigen::CwiseBinaryOp, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >; Func = Eigen::internal::scalar_sum_op; Evaluator = Eigen::internal::redux_evaluator, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >; Scalar = double]’ 243 | const Index alignedStart = internal::first_default_aligned(xpr); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseBinaryOp, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >; typename Eigen::internal::traits::Scalar = double]’ 418 | return internal::redux_impl::run(thisEval, func, derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseBinaryOp, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >; typename Eigen::internal::traits::Scalar = double]’ 463 | return derived().redux(Eigen::internal::scalar_sum_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularSolverVector.h:78:127: required from ‘static void Eigen::internal::triangular_solve_vector::run(Index, const LhsScalar*, Index, RhsScalar*) [with LhsScalar = double; RhsScalar = double; Index = long int; int Mode = 6; bool Conjugate = false]’ 78 | rhs[i] -= (cjLhs.row(i).segment(s,k).transpose().cwiseProduct(Map >(rhs+s,k))).sum(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:73:12: required from ‘static void Eigen::internal::triangular_solver_selector::run(const Lhs&, Rhs&) [with Lhs = const Eigen::Transpose >; Rhs = Eigen::Matrix; int Side = 1; int Mode = 6]’ 71 | triangular_solve_vector | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 | ::run(actualLhs.cols(), actualLhs.data(), actualLhs.outerStride(), actualRhs); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:182:21: [ skipping 16 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:41:51: required from here 41 | xiEst = LamPhi * ldlt_SigmaYi.solve(yVec - muVec) ;// LamPhiSig * (yVec - muVec); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 654 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, -1, 1, true> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, -1, 1, true> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1043:41: required from ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >’ 1043 | CoeffReadCost = evaluator::CoeffReadCost, | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:78: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ 739 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8: required from ‘struct Eigen::internal::evaluator, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> > >’ 722 | struct evaluator > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:774:20: [ skipping 23 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:41:51: required from here 41 | xiEst = LamPhi * ldlt_SigmaYi.solve(yVec - muVec) ;// LamPhiSig * (yVec - muVec); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:78: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ 739 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8: required from ‘struct Eigen::internal::evaluator, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> > >’ 722 | struct evaluator > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:774:20: required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Map, 0, Eigen::Stride<0, 0> >; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >; Functor = sub_assign_op]’ 774 | SrcEvaluatorType srcEvaluator(src); | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31: required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Map, 0, Eigen::Stride<0, 0> >; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >; Functor = Eigen::internal::sub_assign_op; Weak = void]’ 954 | call_dense_assignment_loop(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: [ skipping 21 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 1>, Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:41:51: required from here 41 | xiEst = LamPhi * ldlt_SigmaYi.solve(yVec - muVec) ;// LamPhiSig * (yVec - muVec); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, 1, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:774:20: required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, 1, false>; SrcXprType = Eigen::Block, -1, 1, false>; Functor = swap_assign_op]’ 774 | SrcEvaluatorType srcEvaluator(src); | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31: required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, 1, false>; SrcXprType = Eigen::Block, -1, 1, false>; Functor = Eigen::internal::swap_assign_op; Weak = void]’ 954 | call_dense_assignment_loop(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::Block, -1, 1, false>; Func = swap_assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:858:27: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::Block, -1, 1, false>; Func = swap_assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 858 | call_assignment_no_alias(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:424:22: required from ‘void Eigen::DenseBase::swap(const Eigen::DenseBase&) [with OtherDerived = Eigen::Block, -1, 1, false>; Derived = Eigen::Block, -1, 1, false>]’ 424 | call_assignment(derived(), other.const_cast_derived(), internal::swap_assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:1129:51: [ skipping 21 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:332:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 332 | Base::template _init1(x); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:850:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Func = assign_op; typename enable_if::value, void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 850 | typename plain_matrix_type::type tmp(src); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, const Eigen::Matrix >, Eigen::Solve, 1>, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ GetIndCEScoresCPPnewInd.cpp:42:58: required from here 42 | xiVar = -LamPhi * ldlt_SigmaYi.solve(LamPhi.transpose()); // LamPhiSig.transpose(); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:341: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixVector.h: In function ‘Eigen::internal::trmv_selector<6, 1>::run, -1, -1, false> const, -1, -1, false> const>, Eigen::Transpose, Eigen::CwiseNullaryOp, Eigen::Matrix const> const, Eigen::Transpose, -1, -1, false> const, -1, 1, true> const, -1, 1, false> const> const> const>, Eigen::Transpose, 1, -1, true>, 1, -1, false> > >(Eigen::Transpose, -1, -1, false> const, -1, -1, false> const> const&, Eigen::Transpose, Eigen::CwiseNullaryOp, Eigen::Matrix const> const, Eigen::Transpose, -1, -1, false> const, -1, 1, true> const, -1, 1, false> const> const> const> const&, Eigen::Transpose, 1, -1, true>, 1, -1, false> >&, Eigen::Transpose, 1, -1, true>, 1, -1, false> >::Scalar const&)void [clone .isra.0]’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixVector.h:332:12: warning: ‘result_43’ may be used uninitialized [-Wmaybe-uninitialized] 327 | internal::triangular_matrix_vector_product | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 | | ~~~~~~~~~ 332 | ::run(actualLhs.rows(),actualLhs.cols(), | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 | actualLhs.data(),actualLhs.outerStride(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 | actualRhsPtr,1, | ~~~~~~~~~~~~~~~ 335 | dest.data(),dest.innerStride(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 | actualAlpha); | ~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularMatrixVector.h:105:24: note: by argument 5 of type ‘const double *’ to ‘Eigen::internal::triangular_matrix_vector_product::run(long, long, double const*, long, double const*, long, double*, long, double const&)’ declared here 105 | EIGEN_DONT_INLINE void triangular_matrix_vector_product | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppEigen/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c RcppExports.cpp -o RcppExports.o In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:205, from /usr/local/lib/R/library/RcppEigen/include/Eigen/Dense:1, from /usr/local/lib/R/library/RcppEigen/include/RcppEigenForward.h:28, from /usr/local/lib/R/library/RcppEigen/include/RcppEigen.h:25, from RcppExports.cpp:4: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes] 49 | template<> struct is_arithmetic<__m128> { enum { value = true }; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes] 51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 222 | template<> struct unpacket_traits { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 228 | template<> struct unpacket_traits { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 1124 | ptranspose(PacketBlock& kernel) { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 1129 | ptranspose(PacketBlock& kernel) { | ^ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:174: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:165: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46: required from here 24 | ResAlignment = traits >::Alignment | ^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:271: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3: required from here 27 | { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47: required from here 98 | ResAlignment = traits >::Alignment | ^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3: required from here 102 | { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/SparseCore:37, from /usr/local/lib/R/library/RcppEigen/include/Eigen/Sparse:26, from /usr/local/lib/R/library/RcppEigen/include/RcppEigenForward.h:29: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase >’ 36 | class SparseCompressedBase | ^~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from ‘class Eigen::SparseMatrix’ 96 | class SparseMatrix | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here 61 | typedef Triplet T; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Map.h:18:8: required from ‘struct Eigen::internal::traits > >’ 18 | struct traits > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:32:48: required from ‘struct Eigen::internal::accessors_level > >’ 32 | enum { has_direct_access = (traits::Flags & DirectAccessBit) ? 1 : 0, | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:111:75: required from ‘class Eigen::Map >’ 111 | int Level = internal::accessors_level::has_write_access ? WriteAccessors : ReadOnlyAccessors | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/Rcpp/include/Rcpp/InputParameter.h:77:11: required from ‘class Rcpp::ConstReferenceInputParameter > >’ 77 | T obj ; | ^~~ RcppExports.cpp:20:92: required from here 20 | Rcpp::traits::input_parameter< const Eigen::Map& >::type yVec(yVecSEXP); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Map.h:24:49: required from ‘struct Eigen::internal::traits > >’ 24 | ? PlainObjectType::ColsAtCompileTime | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:32:48: required from ‘struct Eigen::internal::accessors_level > >’ 32 | enum { has_direct_access = (traits::Flags & DirectAccessBit) ? 1 : 0, | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:111:75: required from ‘class Eigen::Map >’ 111 | int Level = internal::accessors_level::has_write_access ? WriteAccessors : ReadOnlyAccessors | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/Rcpp/include/Rcpp/InputParameter.h:77:11: required from ‘class Rcpp::ConstReferenceInputParameter > >’ 77 | T obj ; | ^~~ RcppExports.cpp:20:92: required from here 20 | Rcpp::traits::input_parameter< const Eigen::Map& >::type yVec(yVecSEXP); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase >, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase >, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase >, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: required from ‘class Eigen::MapBase >, 1>’ 223 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map >’ 94 | template class Map | ^~~ /usr/local/lib/R/library/Rcpp/include/Rcpp/InputParameter.h:77:11: required from ‘class Rcpp::ConstReferenceInputParameter > >’ 77 | T obj ; | ^~~ RcppExports.cpp:20:92: required from here 20 | Rcpp::traits::input_parameter< const Eigen::Map& >::type yVec(yVecSEXP); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Map.h:24:49: required from ‘struct Eigen::internal::traits > >’ 24 | ? PlainObjectType::ColsAtCompileTime | ^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:32:48: required from ‘struct Eigen::internal::accessors_level > >’ 32 | enum { has_direct_access = (traits::Flags & DirectAccessBit) ? 1 : 0, | ^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:111:75: required from ‘class Eigen::Map >’ 111 | int Level = internal::accessors_level::has_write_access ? WriteAccessors : ReadOnlyAccessors | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/Rcpp/include/Rcpp/InputParameter.h:77:11: required from ‘class Rcpp::ConstReferenceInputParameter > >’ 77 | T obj ; | ^~~ RcppExports.cpp:23:96: required from here 23 | Rcpp::traits::input_parameter< const Eigen::Map& >::type phiMat(phiMatSEXP); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase >, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase >, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase > >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase >, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: required from ‘class Eigen::MapBase >, 1>’ 223 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map >’ 94 | template class Map | ^~~ /usr/local/lib/R/library/Rcpp/include/Rcpp/InputParameter.h:77:11: required from ‘class Rcpp::ConstReferenceInputParameter > >’ 77 | T obj ; | ^~~ RcppExports.cpp:23:96: required from here 23 | Rcpp::traits::input_parameter< const Eigen::Map& >::type phiMat(phiMatSEXP); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ g++ -std=gnu++17 -shared -L/usr/lib64/R/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o fdarep.so GetIndCEScoresCPP.o GetIndCEScoresCPPnewInd.o RcppExports.o -L/usr/lib64/R/lib -lR installing to /builddir/build/BUILDROOT/R-CRAN-fdarep-0.1.1-1.fc40.copr8100731.x86_64/usr/local/lib/R/library/00LOCK-fdarep/00new/fdarep/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘fdarep’ finding HTML links ... done Dense2dFPCA html DenseMarginalFPCA html DenseProductFPCA html SparseMarginalFPCA html SparseProductFPCA html fdarep html ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (fdarep) + test -d fdarep/src + cd fdarep/src + rm -f GetIndCEScoresCPP.o GetIndCEScoresCPPnewInd.o RcppExports.o fdarep.so + rm -f /builddir/build/BUILDROOT/R-CRAN-fdarep-0.1.1-1.fc40.copr8100731.x86_64/usr/local/lib/R/library/R.css + find /builddir/build/BUILDROOT/R-CRAN-fdarep-0.1.1-1.fc40.copr8100731.x86_64/usr/local/lib/R/library -type f -exec sed -i s@/builddir/build/BUILDROOT/R-CRAN-fdarep-0.1.1-1.fc40.copr8100731.x86_64@@g '{}' ';' + /usr/bin/find-debuginfo -j2 --strict-build-id -m -i --build-id-seed 0.1.1-1.fc40.copr8100731 --unique-debug-suffix -0.1.1-1.fc40.copr8100731.x86_64 --unique-debug-src-base R-CRAN-fdarep-0.1.1-1.fc40.copr8100731.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/fdarep find-debuginfo: starting Extracting debug info from 1 files DWARF-compressing 1 files sepdebugcrcfix: Updated 1 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/R-CRAN-fdarep-0.1.1-1.fc40.copr8100731.x86_64 14 blocks find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/redhat/brp-mangle-shebangs + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j2 + /usr/lib/rpm/redhat/brp-python-hardlink Processing files: R-CRAN-fdarep-0.1.1-1.fc40.copr8100731.x86_64 Provides: R-CRAN-fdarep = 0.1.1-1.fc40.copr8100731 R-CRAN-fdarep(x86-64) = 0.1.1-1.fc40.copr8100731 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libR.so()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.11)(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.15)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) rtld(GNU_HASH) Processing files: R-CRAN-fdarep-debugsource-0.1.1-1.fc40.copr8100731.x86_64 Provides: R-CRAN-fdarep-debugsource = 0.1.1-1.fc40.copr8100731 R-CRAN-fdarep-debugsource(x86-64) = 0.1.1-1.fc40.copr8100731 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: R-CRAN-fdarep-debuginfo-0.1.1-1.fc40.copr8100731.x86_64 Provides: R-CRAN-fdarep-debuginfo = 0.1.1-1.fc40.copr8100731 R-CRAN-fdarep-debuginfo(x86-64) = 0.1.1-1.fc40.copr8100731 debuginfo(build-id) = 985033e5c4d3aed6c6893fdbdaac94af874bd88d Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: R-CRAN-fdarep-debugsource(x86-64) = 0.1.1-1.fc40.copr8100731 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/R-CRAN-fdarep-0.1.1-1.fc40.copr8100731.x86_64 Wrote: /builddir/build/RPMS/R-CRAN-fdarep-0.1.1-1.fc40.copr8100731.x86_64.rpm Wrote: /builddir/build/RPMS/R-CRAN-fdarep-debugsource-0.1.1-1.fc40.copr8100731.x86_64.rpm Wrote: /builddir/build/RPMS/R-CRAN-fdarep-debuginfo-0.1.1-1.fc40.copr8100731.x86_64.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.YGom0a + umask 022 + cd /builddir/build/BUILD + cd fdarep + /usr/bin/rm -rf /builddir/build/BUILDROOT/R-CRAN-fdarep-0.1.1-1.fc40.copr8100731.x86_64 + RPM_EC=0 ++ jobs -p + exit 0 Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.4syzgV + umask 022 + cd /builddir/build/BUILD + rm -rf /builddir/build/BUILD/fdarep-SPECPARTS + rm -rf fdarep fdarep.gemspec + RPM_EC=0 ++ jobs -p + exit 0 RPM build warnings: source_date_epoch_from_changelog set but %changelog is missing Finish: rpmbuild R-CRAN-fdarep-0.1.1-1.fc40.copr8100731.src.rpm Finish: build phase for R-CRAN-fdarep-0.1.1-1.fc40.copr8100731.src.rpm INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-40-x86_64-1727861822.563446/root/var/log/dnf5.log INFO: Done(/var/lib/copr-rpmbuild/results/R-CRAN-fdarep-0.1.1-1.fc40.copr8100731.src.rpm) Config(child) 2 minutes 3 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool Package info: { "packages": [ { "name": "R-CRAN-fdarep", "epoch": null, "version": "0.1.1", "release": "1.fc40.copr8100731", "arch": "x86_64" }, { "name": "R-CRAN-fdarep", "epoch": null, "version": "0.1.1", "release": "1.fc40.copr8100731", "arch": "src" }, { "name": "R-CRAN-fdarep-debugsource", "epoch": null, "version": "0.1.1", "release": "1.fc40.copr8100731", "arch": "x86_64" }, { "name": "R-CRAN-fdarep-debuginfo", "epoch": null, "version": "0.1.1", "release": "1.fc40.copr8100731", "arch": "x86_64" } ] } RPMResults finished