%global __brp_check_rpaths %{nil}
%global __requires_exclude ^libmpi
%global packname  microeco
%global packver   1.10.0
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          1.10.0
Release:          1%{?dist}%{?buildtag}
Summary:          Microbial Community Ecology Data Analysis

License:          GPL-3
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel >= 3.5.0
Requires:         R-core >= 3.5.0
BuildArch:        noarch
BuildRequires:    R-CRAN-ggplot2 >= 3.5.0
BuildRequires:    R-CRAN-igraph >= 2.0.0
BuildRequires:    R-CRAN-R6 
BuildRequires:    R-stats 
BuildRequires:    R-CRAN-ape 
BuildRequires:    R-CRAN-vegan 
BuildRequires:    R-CRAN-rlang 
BuildRequires:    R-CRAN-data.table 
BuildRequires:    R-CRAN-magrittr 
BuildRequires:    R-CRAN-dplyr 
BuildRequires:    R-CRAN-tibble 
BuildRequires:    R-CRAN-scales 
BuildRequires:    R-grid 
BuildRequires:    R-CRAN-RColorBrewer 
BuildRequires:    R-CRAN-reshape2 
Requires:         R-CRAN-ggplot2 >= 3.5.0
Requires:         R-CRAN-igraph >= 2.0.0
Requires:         R-CRAN-R6 
Requires:         R-stats 
Requires:         R-CRAN-ape 
Requires:         R-CRAN-vegan 
Requires:         R-CRAN-rlang 
Requires:         R-CRAN-data.table 
Requires:         R-CRAN-magrittr 
Requires:         R-CRAN-dplyr 
Requires:         R-CRAN-tibble 
Requires:         R-CRAN-scales 
Requires:         R-grid 
Requires:         R-CRAN-RColorBrewer 
Requires:         R-CRAN-reshape2 

%description
A series of statistical and plotting approaches in microbial community
ecology based on the R6 class. The classes are designed for data
preprocessing, taxa abundance plotting, alpha diversity analysis, beta
diversity analysis, differential abundance test, null model analysis,
network analysis, machine learning, environmental data analysis and
functional analysis.

%prep
%setup -q -c -n %{packname}

# fix end of executable files
find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
# prevent binary stripping
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
[ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \
  sed -i 's@-g0@@g' {} \; || true
# don't allow local prefix in executable scripts
find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;

%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
# remove buildroot from installed files
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;

%files
%{rlibdir}/%{packname}