var_manhattan_plot {metasnf} | R Documentation |
Manhattan plot of feature-feature associaiton p-values
Description
Manhattan plot of feature-feature associaiton p-values
Usage
var_manhattan_plot(
data_list,
key_var,
neg_log_pval_thresh = 5,
threshold = NULL,
point_size = 5,
text_size = 20,
plot_title = NULL,
hide_x_labels = FALSE,
bonferroni_line = FALSE
)
Arguments
data_list |
List of dataframes containing data information. |
key_var |
Feature for which the association p-values of all other features are plotted. |
neg_log_pval_thresh |
Threshold for negative log p-values. |
threshold |
p-value threshold to plot dashed line at. |
point_size |
Size of points in the plot. |
text_size |
Size of text in the plot. |
plot_title |
Title of the plot. |
hide_x_labels |
If TRUE, hides x-axis labels. |
bonferroni_line |
If TRUE, plots a dashed black line at the Bonferroni-corrected equivalent of the p-value threshold. |
Value
A Manhattan plot (class "gg", "ggplot") showing the association p-values of features against one key feature in a data list.
[Package metasnf version 1.1.2 Index]