plot_mfi_for_analyte {PvSTATEM} | R Documentation |
Plot MFI value distribution for a given analyte
Description
Plot MFI value distribution for a given analyte
Usage
plot_mfi_for_analyte(
plate,
analyte_name,
data_type = "Median",
plot_type = "violin",
scale_y = "log10",
plot_outliers = FALSE
)
Arguments
plate |
A plate object |
analyte_name |
The analyte to plot |
data_type |
The type of data to plot. Default is "Median" |
plot_type |
The type of plot to generate. Default is "violin". Available options are "boxplot" and "violin". |
scale_y |
What kind of transformation of the scale to apply.
By default MFI is presented in a "log10" scale. Available options are
described in the documentation of scale_y_continuous
under |
plot_outliers |
When using "boxplot" type of a plot one can set this parameter to TRUE and display the names of samples for which MFI falls outside the 1.5 IQR interval |
Value
A ggplot object
[Package PvSTATEM version 0.1.2 Index]