AngGym {orthGS} | R Documentation |
Angiosperms Gymnosperms
Description
Angiosperms Gymnosperms
Usage
AngGym
Format
A dataframe with 155 rows (GS proteins) and 10 columns:
- n
Reference number
- phylo_id
Unique identification label of the protein/gen
- species
Species
- taxon
Acrogymnospermae or Angiospermae
- class
Angiosperms: Amborellopsida, Liliopsida, Magnoliopsida; Gymnosperms: Ginkgoopsida, Cycadopsida, Gnetopsida, Pinopsida
- dna
CDS sequence
- prot
Protein sequence
- short
Unique three letter identification of the species
- gsLineage
Either GS2, GS1a or GS1b
- plant_group
Primitive angiosperms, Modern angiosperms, Ginkgo-Cycadales, Gnetales, Pinacea, Conifer II
Source
It has been manually curated by the authors
[Package orthGS version 0.1.6 Index]